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Ahsan R, Wu Z, Jalal SA, Kapadia R. Ultralow Power Electronic Analog of a Biological Fitzhugh-Nagumo Neuron. ACS Omega 2024; 9:18062-18071. [PMID: 38680341 PMCID: PMC11044232 DOI: 10.1021/acsomega.3c09936] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 12/12/2023] [Revised: 03/14/2024] [Accepted: 03/26/2024] [Indexed: 05/01/2024]
Abstract
Here, we introduce an electronic circuit that mimics the functionality of a biological spiking neuron following the Fitzhugh-Nagumo (FN) model. The circuit consists of a tunnel diode that exhibits negative differential resistance (NDR) and an active inductive element implemented by a single MOSFET. The FN neuron converts a DC voltage excitation into voltage spikes analogous to biological action potentials. We predict an energy cost of 2 aJ/cycle through detailed simulation and modeling for these FN neurons. Such an FN neuron is CMOS compatible and enables ultralow power oscillatory and spiking neural network hardware. We demonstrate that FN neurons can be used for oscillator-based computing in a coupled oscillator network to form an oscillator Ising machine (OIM) that can solve computationally hard NP-complete max-cut problems while showing robustness toward process variations.
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Affiliation(s)
- Ragib Ahsan
- Department of Electrical
and Computer Engineering, University of
Southern California, Los Angeles 90089-0001, United
States
| | - Zezhi Wu
- Department of Electrical
and Computer Engineering, University of
Southern California, Los Angeles 90089-0001, United
States
| | - Seyedeh Atiyeh
Abbasi Jalal
- Department of Electrical
and Computer Engineering, University of
Southern California, Los Angeles 90089-0001, United
States
| | - Rehan Kapadia
- Department of Electrical
and Computer Engineering, University of
Southern California, Los Angeles 90089-0001, United
States
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2
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Chae HU, Shrewsbury B, Ahsan R, Povinelli ML, Kapadia R. GaAs Mid-IR Electrically Tunable Metasurfaces. Nano Lett 2024; 24:2581-2588. [PMID: 38349389 DOI: 10.1021/acs.nanolett.3c04687] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/29/2024]
Abstract
In this work, we explore III-V based metal-semiconductor-metal structures for tunable metasurfaces. We use an epitaxial transfer technique to transfer a III-V thin film directly on metallic surfaces, realizing III-V metal-semiconductor-metal (MSM) structures without heavily doped semiconductors as substitutes for metal layers. The device platform consists of gold metal layers with a p-i-n GaAs junction. The target resonance wavelength can be tuned by modifying the geometry of the top metal grating on the GaAs, while systematic resonance tunability has been shown through the modulation of various carrier concentration injections in the mid-IR range. Electrically tunable metasurfaces with multilevel biasing can serve as a fundamental building block for electrically tunable metasurfaces. We believe that our demonstration can contribute to understanding the optical tuning of III-V under various biased conditions, inducing changes in metasurfaces.
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Affiliation(s)
- Hyun Uk Chae
- Ming Hsieh Department of Electrical and Computer Engineering, University of Southern California, Los Angeles California 90089, United States
| | - Bo Shrewsbury
- Department of Physics and Astronomy, University of Southern California, Los Angeles California 90089, United States
| | - Ragib Ahsan
- Ming Hsieh Department of Electrical and Computer Engineering, University of Southern California, Los Angeles California 90089, United States
| | - Michelle L Povinelli
- Ming Hsieh Department of Electrical and Computer Engineering, University of Southern California, Los Angeles California 90089, United States
- Department of Physics and Astronomy, University of Southern California, Los Angeles California 90089, United States
| | - Rehan Kapadia
- Ming Hsieh Department of Electrical and Computer Engineering, University of Southern California, Los Angeles California 90089, United States
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3
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Abstract
It has been proposed that metal-semiconductor-metal (MSM) structures can be used to tune the absorptivity of a metasurface at infrared wavelengths. Indium arsenide (InAs) is a low-band-gap, high-electron-mobility semiconductor that may enable rapid index tuning for dynamic control over the infrared spectrum. However, direct growth of III-V thin films on top of metals has typically resulted in small-grain, polycrystalline materials that are not amenable to high-quality devices. Previously, epitaxial wafers were used for this purpose. However, the epitaxial constraints required that InAs be used for both the tuning layer and the bottom "metallic" layer, limiting the range of accessible designs. In this work, we show a demonstration of direct growth of single-crystalline InAs on metal to build tunable absorbers/emitters in the infrared regime. The growth was carried out at a temperature of 300 °C by the low temperature templated liquid phase (LT-TLP) method. The size of InAs single-crystalline mesas is ∼2500 μm2, enabling the desired device sizes. The proposed growth and device enable scalable and tunable infrared devices for various thermal-photonic applications.
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Affiliation(s)
- Hyun Uk Chae
- Ming Hsieh Department of Electrical and Computer Engineering, University of Southern California, Los Angeles, California90089, United States
| | - Bo Shrewsbury
- Ming Hsieh Department of Electrical and Computer Engineering, University of Southern California, Los Angeles, California90089, United States
| | - Ragib Ahsan
- Ming Hsieh Department of Electrical and Computer Engineering, University of Southern California, Los Angeles, California90089, United States
| | - Alok Ghanekar
- Ming Hsieh Department of Electrical and Computer Engineering, University of Southern California, Los Angeles, California90089, United States
| | - Michelle L Povinelli
- Ming Hsieh Department of Electrical and Computer Engineering, University of Southern California, Los Angeles, California90089, United States
| | - Rehan Kapadia
- Ming Hsieh Department of Electrical and Computer Engineering, University of Southern California, Los Angeles, California90089, United States
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4
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Ahsan R, Blanche W, Katz LA. Macronuclear development in ciliates, with a focus on nuclear architecture. J Eukaryot Microbiol 2022; 69:e12898. [PMID: 35178799 DOI: 10.1111/jeu.12898] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/03/2021] [Revised: 01/20/2022] [Accepted: 02/14/2022] [Indexed: 11/30/2022]
Abstract
Ciliates are defined by the presence of dimorphic nuclei as they have both a somatic macronucleus and germline micronucleus within each individual cell. The size and structure of both germline micronuclei and somatic macronuclei varies tremendously among ciliates. Except just after conjugation (i.e. the nuclear exchange in sexual cycle), the germline micronucleus is transcriptionally-inactive and contains canonical chromosomes that will be inherited between generations. In contrast, the transcriptionally-active macronucleus contains chromosomes that vary in size in different classes of ciliates, with some lineages having extensively-fragmented gene-sized somatic chromosomes while others contain longer multigene chromosomes. Here, we describe the variation in somatic macronuclear architecture in lineages sampled across the ciliate tree of life, specifically focusing on lineages with extensively fragmented chromosomes (e.g. the classes Phyllopharyngea and Spirotrichea). Further, we synthesize information from the literature on the development of ciliate macronuclei, focusing on changes in nuclear architecture throughout life cycles. These data highlight the tremendous diversity among ciliate nuclear cycles, extend our understanding of patterns of genome evolution, and provide insight into different germline and somatic nuclear features (e.g. nuclear structure and development) among eukaryotes.
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Affiliation(s)
- Ragib Ahsan
- Department of Biological Sciences, Smith College, Northampton, Massachusetts, 01063, USA.,University of Massachusetts Amherst, Program in Organismic and Evolutionary Biology, Amherst, Massachusetts, 01003, USA
| | - Wumei Blanche
- Department of Biological Sciences, Smith College, Northampton, Massachusetts, 01063, USA
| | - Laura A Katz
- Department of Biological Sciences, Smith College, Northampton, Massachusetts, 01063, USA.,University of Massachusetts Amherst, Program in Organismic and Evolutionary Biology, Amherst, Massachusetts, 01003, USA
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5
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Wang B, Yang S, Wang Y, Ahsan R, He X, Kim Y, Htoon H, Kapadia R, John DD, Thibeault B, Doorn SK, Cronin SB. Auger Suppression of Incandescence in Individual Suspended Carbon Nanotube pn-Junctions. ACS Appl Mater Interfaces 2020; 12:11907-11912. [PMID: 32083460 DOI: 10.1021/acsami.9b17519] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/10/2023]
Abstract
There are various mechanisms of light emission in carbon nanotubes (CNTs), which give rise to a wide range of spectral characteristics that provide important information. Here we report suppression of incandescence via Auger recombination in suspended carbon nanotube pn-junctions generated from dual-gate CNT field-effect transistor (FET) devices. By applying equal and opposite voltages to the gate electrodes (i.e., Vg1 = -Vg2), we create a pn-junction within the CNT. Under these gating conditions, we observe a sharp peak in the incandescence intensity around zero applied gate voltage, where the intrinsic region has the largest spatial extent. Here, the emission occurs under high electrical power densities of around 0.1 MW/cm2 (or 6 μW) and arises from thermal emission at elevated temperatures above 800 K (i.e., incandescence). It is somewhat surprising that this thermal emission intensity is so sensitive to the gating conditions, and we observe a 1000-fold suppression of light emission between Vg1 = 0 and 15 V, over a range in which the electrical power dissipated in the nanotube is roughly constant. This behavior is understood on the basis of Auger recombination, which suppresses light emission by the excitation of free carriers. Based on the calculated carrier density and band profiles, the length of the intrinsic region drops by a factor of 7-25× over the range from |Vg| = 0 to 15 V. We, therefore, conclude that the light emission intensity is significantly dependent on the free carrier density profile and the size of the intrinsic region in these CNT devices.
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Affiliation(s)
| | | | | | | | - Xiaowei He
- Center for Integrated Nanotechnologies, Materials Physics and Applications Division, Los Alamos National Laboratory, Los Alamos, New Mexico 87545, United States
| | - Younghee Kim
- Center for Integrated Nanotechnologies, Materials Physics and Applications Division, Los Alamos National Laboratory, Los Alamos, New Mexico 87545, United States
| | - Han Htoon
- Center for Integrated Nanotechnologies, Materials Physics and Applications Division, Los Alamos National Laboratory, Los Alamos, New Mexico 87545, United States
| | | | - Demis D John
- Nanotech, Department of Electrical and Computer Engineering, University of California Santa Barbara, Santa Barbara, California 93106, United States
| | - Brian Thibeault
- Nanotech, Department of Electrical and Computer Engineering, University of California Santa Barbara, Santa Barbara, California 93106, United States
| | - Stephen K Doorn
- Center for Integrated Nanotechnologies, Materials Physics and Applications Division, Los Alamos National Laboratory, Los Alamos, New Mexico 87545, United States
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6
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Abstract
Here, we show that the turn-on voltage for the hydrogen evolution reaction on a graphene surface can be tuned in a semiconductor-insulator-graphene (SIG) device immersed in a solution. Specifically, it is shown that the hydrogen evolution reaction (HER) onset for the graphene can shift by >0.8 V by application of a voltage across a graphene-Al2O3-silicon junction. We show that this shift occurs due to the creation of a hot electron population in graphene due to tunneling from the Si to graphene. Through control experiments, we show that the presence of the graphene is necessary for this behavior. By analyzing the silicon, graphene, and solution current components individually, we find an increase in the silicon current despite a fixed graphene-silicon voltage, corresponding to an increase in the HER current. This additional silicon current appears to directly drive the electrochemical reaction, without modifying the graphene current. We term this current "direct injection current" and hypothesize that this current occurs due to electrons injected from the silicon into graphene that drives the HER before any electron-electron scattering occurs in the graphene. To further determine whether hot electrons injected at different energies could explain the observed total solution current, the nonequilibrium electron dynamics was studied using a 2D ensemble Monte Carlo Boltzmann transport equation (MCBTE) solver. By rigorously considering the key scattering mechanisms, we show that the injected hot electrons can significantly increase the available electron flux at high energies. These results show that semiconductor-insulator-graphene devices are a platform which can tune the electrochemical reaction rate via multiple mechanisms.
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Affiliation(s)
- Hyun Uk Chae
- Department of Electrical and Computer Engineering, University of Southern California, Los Angeles, California 90089, United States
| | - Ragib Ahsan
- Department of Electrical and Computer Engineering, University of Southern California, Los Angeles, California 90089, United States
| | - Jun Tao
- Department of Electrical and Computer Engineering, University of Southern California, Los Angeles, California 90089, United States
| | - Stephen B Cronin
- Department of Electrical and Computer Engineering, University of Southern California, Los Angeles, California 90089, United States
| | - Rehan Kapadia
- Department of Electrical and Computer Engineering, University of Southern California, Los Angeles, California 90089, United States
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7
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Abstract
Using hot electrons to drive electrochemical reactions has drawn considerable interest in driving high-barrier reactions and enabling efficient solar to fuel conversion. However, the conversion efficiency from hot electrons to electrochemical products is typically low due to high hot electron scattering rates. Here, it is shown that the hydrogen evolution reaction (HER) in an acidic solution can be efficiently modulated by hot electrons injected into a thin gold film by an Au-Al2O3-Si metal-insulator-semiconductor (MIS) junction. Despite the large scattering rates in gold, it is shown that the hot electron driven HER can reach quantum efficiencies as high as ∼85% with a shift in the onset of hydrogen evolution by ∼0.6 V. By simultaneously measuring the currents from the solution, gold, and silicon terminals during the experiments, we find that the HER rate can be decomposed into three components: (i) thermal electron, corresponding to the thermal electron distribution in gold; (ii) hot electron, corresponding to electrons injected from silicon into gold which drive the HER before fully thermalizing; and (iii) silicon direct injection, corresponding to electrons injected from Si into gold that drive the HER before electron-electron scattering occurs. Through a series of control experiments, we eliminate the possibility of the observed HER rate modulation coming from lateral resistivity of the thin gold film, pinholes in the gold, oxidation of the MIS device, and measurement circuit artifacts. Next, we theoretically evaluate the feasibility of hot electron injection modifying the available supply of electrons. Considering electron-electron and electron-phonon scattering, we track how hot electrons injected at different energies interact with the gold-solution interface as they scatter and thermalize. The simulator is first used to reproduce other published experimental pump-probe hot electron measurements, and then simulate the experimental conditions used here. These simulations predict that hot electron injection first increases the supply of electrons to the gold-solution interface at higher energies by several orders of magnitude and causes a peaked electron interaction with the gold-solution interface at the electron injection energy. The first prediction corresponds to the observed hot electron electrochemical current, while the second prediction corresponds to the observed silicon direct injection current. These results indicate that MIS devices offer a versatile platform for hot electron sources that can efficiently drive electrochemical reactions.
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Affiliation(s)
- Hyun Uk Chae
- Department of Electrical and Computer Engineering , University of Southern California , Los Angeles , California 90089 , United States
| | - Ragib Ahsan
- Department of Electrical and Computer Engineering , University of Southern California , Los Angeles , California 90089 , United States
| | - Qingfeng Lin
- Department of Electrical and Computer Engineering , University of Southern California , Los Angeles , California 90089 , United States
| | - Debarghya Sarkar
- Department of Electrical and Computer Engineering , University of Southern California , Los Angeles , California 90089 , United States
| | - Fatemeh Rezaeifar
- Department of Electrical and Computer Engineering , University of Southern California , Los Angeles , California 90089 , United States
| | - Stephen B Cronin
- Department of Electrical and Computer Engineering , University of Southern California , Los Angeles , California 90089 , United States
| | - Rehan Kapadia
- Department of Electrical and Computer Engineering , University of Southern California , Los Angeles , California 90089 , United States
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8
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Basith MA, Ahsan R, Zarin I, Jalil MA. Enhanced photocatalytic dye degradation and hydrogen production ability of Bi 25FeO 40-rGO nanocomposite and mechanism insight. Sci Rep 2018; 8:11090. [PMID: 30038398 PMCID: PMC6056507 DOI: 10.1038/s41598-018-29402-w] [Citation(s) in RCA: 34] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/17/2018] [Accepted: 07/05/2018] [Indexed: 11/25/2022] Open
Abstract
A comprehensive comparison between BiFeO3-reduced graphene oxide (rGO) nanocomposite and Bi25FeO40-rGO nanocomposite has been performed to investigate their photocatalytic abilities in degradation of Rhodamine B dye and generation of hydrogen by water-splitting. The hydrothermal technique adapted for synthesis of the nanocomposites provides a versatile temperature-controlled phase selection between perovskite BiFeO3 and sillenite Bi25FeO40. Both perovskite and sillenite structured nanocomposites are stable and exhibit considerably higher photocatalytic ability over pure BiFeO3 nanoparticles and commercially available Degussa P25 titania. Notably, Bi25FeO40-rGO nanocomposite has demonstrated superior photocatalytic ability and stability under visible light irradiation than that of BiFeO3-rGO nanocomposite. The possible mechanism behind the superior photocatalytic performance of Bi25FeO40-rGO nanocomposite has been critically discussed.
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Affiliation(s)
- M A Basith
- Nanotechnology Research Laboratory, Department of Physics, Bangladesh University of Engineering and Technology, Dhaka, 1205, Bangladesh.
| | - Ragib Ahsan
- Nanotechnology Research Laboratory, Department of Physics, Bangladesh University of Engineering and Technology, Dhaka, 1205, Bangladesh
| | - Ishrat Zarin
- Nanotechnology Research Laboratory, Department of Physics, Bangladesh University of Engineering and Technology, Dhaka, 1205, Bangladesh
| | - M A Jalil
- Nanotechnology Research Laboratory, Department of Physics, Bangladesh University of Engineering and Technology, Dhaka, 1205, Bangladesh
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9
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Nishat M, Faisal F, Dip R, Nasrullah S, Ahsan R, Shikder F, Asif M, Hoque M. A Comprehensive Analysis on Detecting Chronic Kidney Disease by Employing Machine Learning Algorithms. EAI Endorsed Transactions on Pervasive Health and Technology 2018. [DOI: 10.4108/eai.13-8-2021.170671] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022] Open
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10
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Ahsan R, Mitra A, Omar S, Rahman Khan MZ, Basith MA. Sol–gel synthesis of DyCrO3 and 10% Fe-doped DyCrO3 nanoparticles with enhanced photocatalytic hydrogen production abilities. RSC Adv 2018; 8:14258-14267. [PMID: 35540784 PMCID: PMC9079860 DOI: 10.1039/c8ra01585f] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/22/2018] [Accepted: 03/22/2018] [Indexed: 11/23/2022] Open
Abstract
DyCrO3 and 10% Fe-doped DyCrO3 nanoparticles have been synthesized using a sol–gel method to investigate their performance in photocatalytic hydrogen production from water. The synthesized nanoparticles have been characterized by performing X-ray diffraction, energy dispersive X-ray spectroscopy and UV-visible spectrophotometric measurements. In addition, field emission scanning electron microscopy has been performed to observe their size and shape. The Fe-doped DyCrO3 nanoparticles show a significantly smaller band gap of 2.45 eV compared to the band gap of 2.82 eV shown by the DyCrO3 nanoparticles. The Fe-doped DyCrO3 nanoparticles show better photocatalytic activity in the degradation of rhodamine B (RhB) compared to the photocatalytic activity shown by both the DyCrO3 and Degussa P25 titania nanoparticles. The recycling and reuse of Fe-doped DyCrO3 four times for the photo-degradation of RhB shows that Fe-doped DyCrO3 is a stable and reusable photocatalyst. To evaluate the extent of the photocatalytic hydrogen production ability of the synthesized nanoparticles, a theoretical model has been developed to determine their “absorptance”, a measure of the ability to absorb photons. Finally, 10% Fe-doped DyCrO3 proves itself to be an efficient photocatalyst as it demonstrated three times greater hydrogen production than Degussa P25. DyFe0.1Cr0.9O3 nanoparticles calcined at 700 °C demonstrate superior photocatalytic ability compared to that of DyCrO3 nanoparticles calcined at the same temperature.![]()
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Affiliation(s)
- Ragib Ahsan
- Department of Electrical and Electronic Engineering
- Bangladesh University of Engineering and Technology
- Dhaka-1205
- Bangladesh
- Department of Physics
| | - Avijit Mitra
- Department of Electrical and Electronic Engineering
- Bangladesh University of Engineering and Technology
- Dhaka-1205
- Bangladesh
- Department of Physics
| | - Saleh Omar
- Department of Electrical and Electronic Engineering
- Bangladesh University of Engineering and Technology
- Dhaka-1205
- Bangladesh
- Department of Physics
| | - Md. Ziaur Rahman Khan
- Department of Electrical and Electronic Engineering
- Bangladesh University of Engineering and Technology
- Dhaka-1205
- Bangladesh
| | - M. A. Basith
- Department of Physics
- Bangladesh University of Engineering and Technology
- Dhaka-1000
- Bangladesh
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11
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Iqbal MJ, Ahsan R, Afzal AJ, Jamai A, Meksem K, El-Shemy HA, Lightfoot DA. Multigeneic QTL: the laccase encoded within the soybean Rfs2/rhg1 locus inferred to underlie part of the dual resistance to cyst nematode and sudden death syndrome. Curr Issues Mol Biol 2009; 11 Suppl 1:i11-19. [PMID: 19193960] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/04/2008] [Revised: 10/05/2008] [Accepted: 10/12/2008] [Indexed: 05/27/2023] Open
Abstract
Multigeneic QTL present significant problems to analysis. Resistance to soybean (Glycine max (L) Merr.) sudden death syndrome (SDS) caused by Fusarium virguliforme was partly underlain by QRfs2 that was clustered with, or pleiotropic to, the multigeneic rhg1 locus providing resistance to soybean cyst nematode (SCN; Heterodera glycines). A group of five genes were found between the two markers that delimited the Rfs2/rhg1 locus. One of the five genes was predicted to encode an unusual diphenol oxidase (laccase; EC 1.10.3.2). The aim of this study was to characterize this member of the soybean laccase gene-family and explore its involvement in SDS resistance. A genomic clone and a full length cDNA was isolated from resistant cultivar 'Forrest' that were different among susceptible cultivars 'Asgrow 3244' and 'Williams 82' at four residues R/H168, I/M271, R/H330, E/K470. Additional differences were found in six of the seven introns and the promoter region. Transcript abundance (TA) among genotypes that varied for resistance to SDS or SCN did not differ significantly. Therefore the protein activity was inferred to underlie resistance. Protein expressed in yeast pYES2/NTB had weak enzyme activity with common substrates but good activity with root phenolics. The Forrest isoform may underlie both QRfs2 and rhg1.
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Affiliation(s)
- M J Iqbal
- Institute for Sustainable and Renewable Resources (ISRR), Institute for Advanced Learning and Research (IALR), Danville, VA 24540, USA
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12
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Chang GQ, Karatayev O, Ahsan R, Gaysinskaya V, Marwil Z, Leibowitz SF. Dietary fat stimulates endogenous enkephalin and dynorphin in the paraventricular nucleus: role of circulating triglycerides. Am J Physiol Endocrinol Metab 2007; 292:E561-70. [PMID: 17283367 DOI: 10.1152/ajpendo.00087.2006] [Citation(s) in RCA: 62] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Abstract
The opioid peptides enkephalin (ENK) and dynorphin (DYN), when injected into the hypothalamus, are known to stimulate feeding behavior and preferentially increase the ingestion of a high-fat diet. Studies of another peptide, galanin (GAL), with similar effects on feeding demonstrate that a high-fat diet, in turn, can stimulate the expression of this peptide in the hypothalamus. The present study tested different diets and variable periods of high- vs. low-fat diet consumption to determine whether the opioid peptides respond in a similar manner as GAL. In six experiments, the effects of dietary fat on ENK and DYN were examined in three hypothalamic areas: the paraventricular nucleus (PVN), perifornical hypothalamus (PFH), and arcuate nucleus (ARC). The results demonstrated that the ingestion of a high-fat diet increases gene expression and peptide levels of both ENK and DYN in the hypothalamus. The strongest and most consistent effect is seen in the PVN. In this nucleus, ENK and DYN are increased by 50-100% after 1 wk, 1 day, 60 min, and even 15 min of high-fat diet consumption. While showing some effect in the PFH, these peptides in the ARC are considerably less responsive, exhibiting no change in response to the briefer periods of diet intake. This effect of dietary fat on PVN opioids can be observed with diets equal in caloric density and palatability and without a change in caloric intake, body weight, fat pad weight, or levels of insulin or leptin. The data reveal a strong and consistent association between these peptides and a rise in circulating levels of triglycerides, supporting a role for these lipids in the fat-induced stimulation of opioid peptides in the PVN, similar to GAL.
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Affiliation(s)
- G-Q Chang
- The Rockefeller University, 1230 York Ave., New York, NY 10021, USA
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13
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Khondaker AR, Obaidullah M, Ahsan R. Anemia in pregnancy in a northern district of Bangladesh. Mymensingh Med J 2005; 14:93-4. [PMID: 15695966] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/01/2023]
Affiliation(s)
- A R Khondaker
- Associate Professor (cc), Department of Biochemistry Rajshahi Medical College, Rajshahi
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14
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Iqbal MJ, Yaegashi S, Ahsan R, Lightfoot DA, Banz WJ. Differentially abundant mRNAs in rat liver in response to diets containing soy protein isolate. Physiol Genomics 2002; 11:219-26. [PMID: 12388795 DOI: 10.1152/physiolgenomics.00078.2002] [Citation(s) in RCA: 28] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022] Open
Abstract
Soy diets influence cell growth, regulate lipid metabolism to lower blood cholesterol, and prevent bone losses. These biological effects are most likely due to effects of soy phytochemicals on the expression of genes. In this study, we fed 12 female obese Zucker rats (fa/fa) with a low- or a high-isoflavone soy protein diet and compared the gene expression with animals on a casein diet. Rat livers were compared by differential display of mRNA, and 62 unique sequences were identified. The change in mRNA abundance of these sequences was quantified by cDNA macroarray analysis. Thirty-three mRNAs showed more than twofold increase in abundance on soy diets compared with the control. The corresponding genes include carnitine palmitoyltransferase I, stromal cell-derived factor 1, a protein associated with MYC mRNA, basic transcription element binding protein, and expressed sequence tags (ESTs) of unknown function. Twenty-nine mRNAs showed a less than twofold change in abundance in the two diet treatments. For majority of the genes identified, there was not significant difference between the low- and high-isoflavone diet treatments. Therefore, the contrast between soy protein and casein caused the changes observed in mRNA abundance.
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Affiliation(s)
- M J Iqbal
- Center of Excellence for Soybean Research, Teaching and Outreach, Dept. of Animal Science, Food and Nutrition, Southern Illinois University at Carbondale, Carbondale, Illinois 62901-4317, USA. ;
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15
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Iqbal J, Afzal J, Yaegashi S, Ruben E, Triwitayakorn K, Njiti N, Ahsan R, Wood J, Lightfoot A. A pyramid of loci for partial resistance to Fusarium solani f. sp. glycines maintains Myo-inositol-1-phosphate synthase expression in soybean roots. Theor Appl Genet 2002; 105:1115-1123. [PMID: 12582889 DOI: 10.1007/s00122-002-0987-0] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/25/2001] [Accepted: 03/28/2002] [Indexed: 05/24/2023]
Abstract
Myo-inositol 1-phosphate synthase (MIPS; EC 5.5.1.4) converts glucose 6-phosphate to myo-inositol 1-phosphate in the presence of NAD(+). It catalyzes the first step in the synthesis of myo-inositol and pinitol, and is a rate limiting step in the de novo biosynthesis of inositol in eukaryotes. Therefore, MIPS is involved in biotic and abiotic stress via Ca(2+) signalling. Seedlings of four soybean genotypes were inoculated with Fusarium solani f. sp. glycines, the causative agent of sudden death syndrome (SDS), and differentially abundant mRNAs were identified by differential display. The genotypes carried either zero, two, four or six alleles of the quantitative trait loci (QTLs) that control resistance to SDS in an additive manner. The mRNA abundance of MIPS did not decrease following inoculation in a recombinant inbred line (RIL 23) containing all six resistance alleles of the QTLs conferring resistance to SDS of soybean. However, the abundance of MIPS mRNA was decreased in genotypes containing four, two or no resistance alleles. The specific activity of the MIPS enzyme in vitro followed the same pattern across genotypes. The IP(3) content in the inoculated roots of genotypes with two, four or six resistance alleles were higher compared to the non-inoculated root. The results suggests that a non-additive effect on transcription and translation of MIPS is established in RIL 23 roots by pyramiding six QTLs for resistance to SDS. A role of MIPS in the partial resistance or response of soybean roots to F. solani infection is suggested.
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Affiliation(s)
- J. Iqbal
- Center for Excellence in Soybean Research, Teaching and Outreach, Department of Plant, Soil and General Agriculture, Southern Illinois University at Carbondale, Carbondale, IL 62901-4415, USA,
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Iqbal MJ, Yaegashi S, Njiti VN, Ahsan R, Cryder KL, Lightfoot DA. Resistance locus pyramids alter transcript abundance in soybean roots inoculated with Fusarium solani f.sp. glycines. Mol Genet Genomics 2002; 268:407-17. [PMID: 12436262 DOI: 10.1007/s00438-002-0762-6] [Citation(s) in RCA: 26] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/11/2002] [Accepted: 09/19/2002] [Indexed: 10/27/2022]
Abstract
Soybean Sudden Death Syndrome (SDS) is caused by Fusarium solani f.sp. glycines (Fsg). Six quantitative trait loci (QTLs), each conferring partial resistance to SDS, have been discovered in an Essex x Forrest recombinant inbred line (RIL) population, but their mode of action is not clear. This study aimed to identify genes (ESTs) whose mRNA transcripts were altered in abundance in soybean roots following inoculation of Fsg. Roots of the soybean variety Forrest (four resistance alleles) were inoculated with Fsg, and 14 days later RNA sequences that were differentially expressed relative to uninoculated roots were enriched using suppression subtraction and differential display. The abundance of these RNAs was quantified in inoculated and non-inoculated roots by macroarray hybridizations. A unigene set of 135 ESTs was identified and used in a further macroarray analysis. The abundance of 28 cDNA fragments was increased more than two-fold in inoculated compared to uninoculated roots of RIL 23 (six resistance alleles). In Forrest and Essex (two resistance alleles), the level of only one mRNA was increased two-fold in inoculated roots compared to the uninoculated roots. In Essex most of the mRNAs analyzed decreased in abundance (61/135 showed a two-fold decrease), while in Forrest most mRNA abundances did not change. Among the 28 cDNAs that revealed a two-fold or higher increase in mRNA abundance in RIL 23, 14% code for proteins known to be involved in plant defense, 21% in metabolism, 14% in cell structure and 4% in transport. Unannotated ESTs accounted for 43% of the genes, and 4% of the sequences were previously unknown. The plant defense-related genes that showed a differential response to Fsg inoculation suggested a role for the phenylproponoid pathway in soybean defense against Fsg. In Essex, genes involved in plant defense, cell wall synthesis, ethylene synthesis and metabolism were expressed at lower levels in inoculated roots. The difference in response between the 2-, 4- and 6-gene pyramids suggests that QTLs for SDS resistance serve to delay symptoms or confer resistance by maintaining or increasing the expression of specific genes after inoculation/infection.
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Affiliation(s)
- M J Iqbal
- Center for Excellence in Soybean Research, Teaching and Outreach, Department of Plant, Soil and General Agriculture, Southern Illinois University at Carbondale, Carbondale, IL 62901, USA.
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Abstract
The molecular and morphologic features of herniated human intervertebral disc tissues are of particular importance to clarify the pathogenesis. The present study analyzed the biochemical and morphological features of herniated intervertebral disc tissues to determine the constituent factors responsible for intervertebral disc herniation. A total of 32 herniated disc specimens and 4 control disc samples were analyzed. Collagen subunit composition, collagenase activity, lipid peroxidation level, caspase-3 activity, metal levels, morphologic studies, and genetic analysis were performed on herniated disc tissues of chronic (group A) and acute (group B) group and compared with findings of control group. Nick translation analysis in situ revealed apoptotic-positive stained DNA fragments as black-brown spots in herniated disc tissues. The presence of type II collagen in control disc samples and its absence in herniated samples were confirmed immunohistochemically. The increased caspase-3 activity, the apoptotic-positive stained DNA fragments, and the electron microscopic findings suggest enhanced programmed cell death in herniated discs. The significant increase in lipid peroxidation levels and collagenase activity, and the low metal levels suggest the enhancement of cell death signals in herniated discs, caused by oxygen stress. Linkage analysis of herniated disc tissues in Japanese individuals may suggest ethnic variation. These findings may be helpful in understanding the pathogenesis of herniated disc disease.
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Affiliation(s)
- R Ahsan
- Department of Orthopaedic Surgery, Miyazaki Medical College, 5200 Kihara, Kiyotake-cho, Miyazaki 889-1692, Japan
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Micallef JV, Hayes MM, Latif A, Ahsan R, Sufi SB. Serum binding of steroid tracers and its possible effects on direct steroid immunoassay. Ann Clin Biochem 1995; 32 ( Pt 6):566-74. [PMID: 8579290 DOI: 10.1177/000456329503200609] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/31/2023]
Abstract
We studied the serum protein binding of 3H-labelled progesterone, oestradiol and testosterone, and five 125I-labelled analogues of these steroids. All tracers investigated appeared to be bound by proteins in every serum sample tested. The addition of blocking agents caused a substantial reduction in serum protein binding of 3H-labelled steroids, but had relatively little effect on the binding of analogue steroid tracers. Use of analogue steroid tracers in conventional direct immunoassays for oestradiol and progesterone produced anomalous results for some patient samples when compared to extraction radioimmunoassays, but assays where tracer binding to serum constituents was prevented by adoption of two-step procedures appeared to avoid anomalous results. The results suggest that serum protein binding of steroid analogue tracers may be a source of interference in some direct steroid immunoassays.
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Affiliation(s)
- J V Micallef
- World Health Organization Collaborating Centre for Research in Immunoassay, Hammersmith Hospital, London, UK
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Yamada M, Koeda T, Kikuchi H, Nasu M, Isagozawa S, Mukaida H, Yosida H, Ahsan R, Otokida K, Kato M. [Evaluation of increasing digital blood flow during early period of air-cooled cold test]. Kokyu To Junkan 1990; 38:571-6. [PMID: 2377827] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
Abstract
The present study was performed to elucidate peripheral hemodynamic changes, especially, digital blood flow, caused by an air-cooled cold test. Experiments were carried out by placing the subject's left hand in a box that was kept at a temperature of about 18 degrees C by air-cooling. At the same time, the digital blood flow, digital blood pressure, compliances of the peripheral resistance and capacitance vessels were measured. These parameters were measured on the left forefinger of the cooled side, and also on the opposite side according to Kato's method at 3 points, 1) at normal condition (before cooling stated). 2) 30 seconds after the cooling began and 3) 10 minutes after the cooling began. The following results were obtained; 1) The systemic blood pressure, digital blood pressure and heart rate showed no statistically significant differences in measurements taken at the above three stages. 2) The mean value of the digital blood flow was found to have increased after 30 seconds, and to have decreased after 10 minutes of cooling. Statistically, significant differences were noted at the above three stages. 3) The mean value of the peripheral vascular resistance was found to have increased after 30 seconds, and to have decreased after 10 minutes. 4) Compliances of the peripheral resistance vessel and capacitance vessel showed no significant changes on either side except between normal condition and after 10 minutes of cooling.
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Affiliation(s)
- M Yamada
- Second Department of Internal Medicine, Iwate Medical University School of Medicine
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