Unveiling of climate change-driven decline of suitable habitat for Himalayan bumblebees

Insect pollinators, especially bumblebees are rapidly declining from their natural habitat in the mountain and temperate regions of the world due to climate change and other anthropogenic activities. We still lack reliable information about the current and future habitat conditions of bumblebees in the Himalaya. In this study, we used the maximum entropy algorithm for SDM to look at current and future (in 2050 and 2070) suitable habitats for bumblebees in the Himalaya. We found that the habitat conditions in the Himalayan mountain range do not have a very promising future as suitable habitat for most species will decrease over the next 50 years. By 2050, less than 10% of the Himalayan area will remain a suitable habitat for about 72% of species, and by 2070 this number will be raised to 75%. During this time period, the existing suitable habitat of bumblebees will be declined but some species will find new suitable habitat which clearly indicates possibility of habitat range shift by Himalayan bumblebees. Overall, about 15% of the Himalayan region is currently highly suitable for bumblebees, which should be considered as priority areas for the conservation of these pollinators. Since suitable habitats for bumblebees lie between several countries, nations that share international borders in the Himalayan region should have international agreements for comprehensive pollinator diversity conservation to protect these indispensable ecosystem service providers.

N-mixture model-based estimate of relative abundance of sloth bear (Melursus ursinus) in response to biotic and abiotic factors in a human-dominated landscape of central India

Reliable estimation of abundance is a prerequisite for a species' conservation planning in human-dominated landscapes, especially if the species is elusive and involved in conflicts. As a means of population estimation, the importance of camera traps has been recognized globally, although estimating the abundance of unmarked, cryptic species has always been a challenge to conservation biologists. This study explores the use of the N-mixture model with three probability distributions, i.e., Poisson, negative binomial (NB) and zero-inflated Poisson (ZIP), to estimate the relative abundance of sloth bears (Melursus ursinus) based on a camera trapping exercise in Sanjay Tiger Reserve, Madhya Pradesh from December 2016 to April 2017. We used environmental and anthropogenic covariates to model the variation in the abundance of sloth bears. We also compared null model estimates (mean site abundance) obtained from the N-mixture model to those of the Royle-Nichols abundance-induced heterogeneity model (RN model) to assess the application of similar site-structured models. Models with Poisson distributions produced ecologically realistic and more precise estimates of mean site abundance (λ = 2.60 ± 0.64) compared with other distributions, despite the relatively high Akaike Information Criterion value. Area of mixed and sal forest, the photographic capture rate of humans and distance to the nearest village predicted a higher relative abundance of sloth bears. Mean site abundance estimates of sloth bears obtained from the N-mixture model (Poisson distribution) and the RN model were comparable, indicating the overall utility of these models in this field. However, density estimates of sloth bears based on spatially explicit methods are essential for evaluating the efficacy of the relatively more cost-effective N-mixture model. Compared to commonly used index/encounter-based methods, the N-mixture model equipped with knowledge on governing biotic and abiotic factors provides better relative abundance estimates for a species like the sloth bear. In the absence of absolute abundance estimates, the present study could be insightful for the long-term conservation and management of sloth bears.

Changes in ecological conditions may influence intraguild competition: inferring interaction patterns of snow leopard with co-predators

Background

Large-scale changes in habitat conditions due to human modifications and climate change require management practices to consider how species communities can alter amidst these changes. Understanding species interactions across the gradient of space, anthropogenic pressure, and season provide the opportunity to anticipate possible dynamics in the changing scenarios. We studied the interspecific interactions of carnivore species in a high-altitude ecosystem over seasonal (summer and winter) and resource gradients (livestock grazing) to assess the impact of changing abiotic and biotic settings on coexistence.

Methods

The study was conducted in the Upper Bhagirathi basin, Western Himalaya, India. We analyzed around 4 years of camera trap monitoring data to understand seasonal spatial and temporal interactions of the snow leopard with common leopard and woolly wolf were assessed in the greater and trans-Himalayan habitats, respectively. We used two species occupancy models to assess spatial interactions, and circadian activity patterns were used to assess seasonal temporal overlap amongst carnivores. In addition, we examined scats to understand the commonalities in prey selection.

Results

The result showed that although snow leopard and wolves depend on the same limited prey species and show high temporal overlap, habitat heterogeneity and differential habitat use facilitate co-occurrence between these two predators. Snow leopard and common leopard were spatially independent in the summer. Conversely, the common leopard negatively influences the space use of snow leopard in the winter. Limited prey resources (lack of livestock), restricted space (due to snow cover), and similar activity patterns in winter might result in strong competition, causing these species to avoid each other on a spatial scale. The study showed that in addition to species traits and size, ecological settings also play a significant role in deciding the intensity of competition between large carnivores. Climate change and habitat shifts are predicted to increase the spatial overlap between snow leopard and co-predators in the future. In such scenarios, wolves and snow leopards may coexist in a topographically diverse environment, provided sufficient prey are available. However, shifts in tree line might lead to severe competition between common leopards and snow leopards, which could be detrimental to the latter. Further monitoring of resource use across abiotic and biotic environments may improve our understanding of how changing ecological conditions can affect resource partitioning between snow leopards and predators.

Mitochondrial cytochrome b indicates the presence of two paraphyletic diverged lineages of the blue sheep Pseudois nayaur across the Indian Himalaya: conservation implications

BACKGROUND

Populations exhibit signatures of local adaptive traits due to spatial and environmental heterogeneity resulting in microevolution. The blue sheep is widely distributed across the high Asian mountains and are the snow leopard's principal prey species. These mountains differ in their evolutionary history due to differential glaciation and deglaciation periods, orography, and rainfall patterns, and such factors causes diversification in species.

METHODS AND RESULTS

Therefore, we assess the phylogeographic status of blue sheep using the mitochondrial cytochrome b gene (220 bp) across the Indian Himalayan region (IHR) and its relationship with other populations. Of the observed five haplotypes, two and three were from the western Himalayas (WH) and eastern Himalayas (EH) respectively. One of the haplotypes from WH was shared with the population of Pamir plateau, suggesting historical maternal connectivity between these areas. The phylogenetic analyses split the blue sheep into two paraphyletic clades, and western and eastern populations of IHR were within the Pamir and Tibetan plateau clades, respectively. We observed a relatively higher mean sequence divergence in the EH population than in the WH.

CONCLUSION

We propose five 'Evolutionary Significant Units' across the blue sheep distribution range based on observed variation in the species' ecological requirements, orography, climatic conditions, and maternal lineages, viz.; Western Himalaya-Pamir plateau (WHPP); Eastern Himalaya-Tibetan plateau (EHTP); Qilian mountains; Helan mountains and Hengduan mountains population. Despite the small sample size, population divergence was observed across the IHR, therefore, we suggest a transboundary, collaborative study on comparative morphology, anatomy, ecology, behaviour, and population genetics using harmonized different genetic markers for identifying the overall taxonomic status of the blue sheep across its range for planning effective conservation strategies.

Geography vs. past climate: the drivers of population genetic structure of the Himalayan langur

Background

Contemporary species distribution, genetic diversity and evolutionary history in many taxa are shaped by both historical and current climate as well as topography. The Himalayas show a huge variation in topography and climatic conditions across its entire range, and have experienced major climatic fluctuations in the past. However, very little is known regarding how this heterogenous landscape has moulded the distribution of Himalayan fauna. A recent study examined the effect of these historical events on the genetic diversity of the Himalayan langurs in Nepal Himalaya. However, this study did not include the samples from the Indian Himalayan region (IHR). Therefore, here we revisit the questions addressed in the previous study with a near complete sampling from the IHR, along with the samples from the Nepal Himalaya. We used the mitochondrial Cytochrome-b (Cyt-b, 746 bp) region combined with multiple phylogeographic analyses and palaeodistribution modelling.

Results

Our dataset contained 144 sequences from the IHR as well as the Nepal Himalaya. Phylogenetic analysis showed a low divergent western clade nested within high divergent group of eastern lineages and in the network analysis we identified 22 haplotypes over the entire distribution range of the Himalayan langurs. Samples from the Nepal Himalaya showed geographically structured haplotypes corresponding to different river barriers, whereas samples from IHR showed star-like topology with no structure. Our statistical phylogeography analysis using diyABC supported the model of east to west colonisation of these langurs with founder event during colonisation. Analysis of demographic history showed that the effective population size of the Himalayan langurs decreased at the onset of last glacial maximum (LGM) and started increasing post LGM. The palaeodistribution modelling showed that the extent of suitable habitat shifted from low elevation central Nepal, and adjoining parts of north India, during LGM to the western Himalaya at present.

Conclusion

The current genetic diversity and distribution of Himalayan langurs in the Nepal Himalaya has been shaped by river barriers, whereas the rivers in the IHR had relatively less time to act as a strong genetic barrier after the recent colonisation event. Further, the post LGM expansion could have had confounding effect on Himalayan langur population structure in both Nepal Himalaya and IHR.

Supplementary Information

The online version contains supplementary material available at 10.1186/s12862-022-02054-1.

Spatio-Temporal Patterns and Source-Dispersion Modeling Towards Sloth Bear–Human Conflict Management in Central India

The impact of humans on biodiversity, in the form of the spatially extensive occurrence of humans and subsequent habitat degradation, leads to negative interactions between humans and native wildlife. However, knowledge of the spatial and temporal interface between humans and wildlife is necessary to understand the root cause of such negative interactions, yet considerably understudied in the context of human-dominated landscapes in south and south-eastern Asia. We took this opportunity, gaining insights on seasonal spatial interaction and spatio-temporal overlap between sloth bears (Melursus ursinus) and humans, and subsequently predicted the conflict source sites and dispersion (i.e., hotspots) based on the robust geographic profiling (GP) method in the Sanjay Tiger Reserve (STR), a human-dominated landscape of central India. Detection data of sloth bear and human were obtained from camera trap survey conducted for two years (2017–2018) and records of conflict incidents (2009–2019) were collected from forest department. We found that sloth bears can co-occur with humans independently of seasons, based on occupancy models. However, during summer, higher temporal overlap (Δ4 = 0.46) and lower spatial overlap (0.31) were observed between sloth bears and humans. Contrastingly, lower temporal overlap (Δ4 = 0.29) and higher spatial overlap (0.44) were observed between the same two during winter. The activity patterns of sloth bears and humans differed significantly across seasons and within the same species in different seasons. Our findings indicated that significant changes in human activity, especially during summer, increased the likelihood of sloth bear-human interaction and subsequent conflict incidents. The mapping of conflict source and dispersion (with high accuracy) also predicted a greater probability of conflict during summer, compared to winter, and thus showed the successful application of GP models in this field. Also, camera trap data alone were able to predict the occurrence of hotspots, demonstrating the use of camera trap records in the successful prediction of source-dispersion of conflict. This study would be useful for decision-makers to alleviate sloth bear–human conflict based on insights on seasonal variation of spatio-temporal overlap between the two and direct conservation efforts accordingly.

Leopards in the City: The Tale of Sanjay Gandhi National Park and Tungareshwar Wildlife Sanctuary, Two Protected Areas in and Adjacent to Mumbai, India

Recent studies in the last decade have recorded obligate carnivores adapting to human dominated landscapes. Leopards, amongst other large carnivores, are highly adaptable and survive in a range of environments from the arid regions of Africa and the Middle East to the cold regions of the Russian Far East. They are also highly adaptable in their diet and consequently are present close to and even within high-density human landscapes. These also include the edges of urban areas such as Nairobi and Mumbai. Our study, to better understand the coexistence of leopards and humans, was conducted in 104 km2 of Sanjay Gandhi National Park (SGNP), which is surrounded on three sides by the urban landscape of Mumbai and Thane cities. The study area also included 85 km2 of an adjoining protected area, Tungareshwar Wildlife Sanctuary (TWLS), which is surrounded by a combination of forests, rural areas and agricultural lands. Based on spatial capture—recapture framework we observed that leopard densities in SGNP (26.34 ± 4.96 leopards/100 km2) and TWLS (5.40 ± 2.99 leopards/100 km2) were vastly different. We found that density estimates of wild prey and domestic dogs were higher in SGNP in comparison to TWLS. In both the protected areas (PAs), domestic dogs formed a major proportion of leopard diet and were the single highest species contributors. Our study shows that despite extremely high human density around SGNP (~20,000 people/km2), leopard density is also much higher than the adjoining TWLS which has a comparatively lower surrounding density of people (~1,700 people/km2). Leopard density reported from SGNP is amongst the highest ever reported. This interesting result is probably due to much higher biomass of potential food resources in and around SGNP. Studying this relationship between leopards and their prey (both wild and domestic) in a human dominated landscape will give us valuable insights on human—leopard interactions. The two adjacent and connected PAs are similar ecologically, but differ widely in almost all other aspects, including human densities along the periphery, leopard densities, prey densities as well as management regimes.

Space Use by Woolly Wolf Canis lupus chanco in Gangotri National Park, Western Himalaya, India

The woolly wolf Canis lupus chanco is increasingly being accepted as a unique taxon that needs immediate protection and management; however, information on its ecology remains limited across its range. We used camera trapping data set of 4 years (2015–2019) to investigate seasonal activity patterns and space use and assessed woolly wolf food habits in the Gangotri National Park, western Himalaya, India. We used generalized linear mixed models to assess the distribution of the wolf about prey, seasonal livestock grazing, human presence, habitat, and seasons. We observed a positive association with elevation and a negative response to an increase in ruggedness. The capture of wolves increased in winters, indicating a possible effect of snow on the ranging pattern. Spatial avoidance to anthropogenic pressure was not evident in our study; however, temporal avoidance was observed. The activity pattern of the wolf varied among seasons. Wolves were mostly active in the morning and late evening hours in summer and showed a diurnal activity pattern in winter. A less diverse diet was observed where the mean percentage frequency of occurrence and relative biomass was highest for bharal, followed by livestock. Himalayan marmot Marmota himalayana, birds, and rodents also form minor constituents to the diet. Synthesizing all three factors (space, diet, and activity), it may be stated that the wolf presence in the region is influenced by both wild prey availability and seasonality. Therefore, conservation of woolly wolves would require securing a vast landscape with optimal wild prey.

A rare photographic record of Eurasian Otter Lutra lutra with a note on its habitat from the Bhagirathi Basin, western Himalaya, India

The Eurasian Otter Lutra lutra is an elusive, solitary animal that has one of the widest distributions of all palearctic mammals. Once widely distributed in Asia, the Eurasian Otter population is now vulnerable to urbanization, pollution, poaching, and dam construction. Eurasian Otter distribution in the Indian Himalayan rivers is little explored, and information from this high-altitude riverine ecosystem is sparse. This publication reports a rare photographic record of the Eurasian Otter which confirms its presence in the high-altitude temperate forest of the Upper Bhagirathi Basin, western Himalayan region. The otter was recorded during investigations of terrestrial and aquatic fauna in the Bhagirathi Basin (7,586 km2, 500–5,000 m) of Uttarakhand State, India from October 2015 to May 2019. Among aquatic fauna, Brown Trout were found to be abundant in high altitude river stretches, with a catch per unit effort of 1.02 kg h–1. Additionally, 26 families of freshwater macroinvertebrates underscored a rich diet available for the Brown Trout, which in turn is a potential food source for the otters. The riverine ecosystem is undergoing dramatic changes because of the increasing demand for hydropower plants in the Bhagirathi Basin. Although mitigation measures are currently in place for fish, the presence of otters further necessitates the need for targeted management for high-altitude Himalayan rivers. There is an imperative need for intensive otter surveys using methods such as camera traps in riparian habitats along the Bhagirathi River and its tributaries.

A preliminary assessment of odonate diversity along the river Tirthan, Great Himalayan National Park Conservation Area, India with reference to the impact of climate change

A total of 19 species of odonates, including eight species of Anisoptera (dragonflies) and 11 species of Zygoptera (damselflies), were recorded along the Tirthan River, Great Himalayan National Park Conservation Area (GHNPCA), Himachal Pradesh. Among these species, 17 were reported from the area for the first time. With the addition of these new records the number of odonates known from the GHNPCA is increased to 23 species representing 18 genera and eight families. Indothemis carnatica, Agriocnemis femina, and Argiocnemis rubescens are reported for the first time from the western Himalayan region. The study found a significant change in the species composition of odonates over a period of 18 years in the area, which may be due to changes in microhabitat conditions associated with climate change.

Assessment of changes over a decade in the patterns of livestock depredation by the Himalayan Brown Bear in Ladakh, India

Conflicts between large carnivores and shepherds constitute a major socio-ecological concern across the Himalaya and affects community attitudes and tolerance toward carnivores. We assessed the extent and intensity of Human-Brown Bear interactions in the same villages of Zanskar and Suru Valleys, Ladakh, in the Indian Trans-Himalaya during two time periods (2001–2003 and 2009–2012) through field and questionnaire surveys. During 2001–2003, 180 families of 32 villages in Zanskar, and 232 families of 49 villages in Suru were interviewed, and during 2009–2012, 145 families of 23 villages in Zanskar and 115 families of 33 villages in Suru were interviewed. Overall, 475 (119/year) and 454 (151/year) heads of livestock were reportedly killed by Brown Bears. The surveys of 2009–2012 revealed that livestock predation in ‘doksas’ (summer grazing camps) was higher (68 %) compared to the surveys carried out during 2001–2003 (42 %). The increased livestock depredation in doksas might be due to the extended stay and use of pastures by the local communities during spring and autumn. Damage to property in the form of breaking open of doors and windows by Brown Bear were reported during both the surveys. Economic losses and declining tolerance of people may trigger retaliatory killings of Brown Bear in Ladakh. We recommend compensation for livestock loss and improved husbandry practices in the conflict zones for bear-human coexistence.

First report of the Asiatic Brush-tailed Porcupine Atherurus macrourus (Linnaeus, 1758) (Mammalia: Rodentia: Hystricidae) from West Bengal­­­, India

We report the western most distribution of the Asiatic Brush-tailed Porcupine Atherurus macrourus (Thomas, 1921) in India.  An individual was photo captured in the semi-evergreen forests of Mahananda Wildlife Sanctuary, northern West Bengal on the night of 28 January 2019.  It is a rare rodent species that is distributed in the northeastern states of India but was not reported from West Bengal. 

Effectiveness of non-lethal predator deterrents to reduce livestock losses to leopard attacks within a multiple-use landscape of the Himalayan region

Lethal measures are widely adopted by local communities and governments to manage human-wildlife conflicts. Such measures lead to large scale decline of carnivore populations globally with trophic cascades on ecosystems and questionable impacts on human-wildlife conflicts. Mitigating human-carnivore conflicts through non-lethal measures will protect endangered predators and secure livelihoods. However, information on the effectiveness of such measures are extremely limited and hence cannot be applied in developing scientific evidence. Further to develop human-carnivore coexistence models, it is important for local community members, biologists and wildlife managers to actively participate in conservation programs. We evaluated the response of a non-lethal visual deterrent (i.e. fox lights) to deter leopard attacks on livestock within a multiple-use landscape of western Himalaya through community engagement. We monitored 16 experimental sites and 17 control sites within 27 villages and recorded data on livestock depredation by leopards between April 2018 to April 2019. A multivariate analysis was conducted to determine the influence of landscape predictors and animal husbandry practices on livestock depredation by leopards within the vicinity of human settlements. We found that visual deterrents discouraged common leopards to predate on livestock (cows and goats). We also demonstrated that community based conservation initiatives are successful in mitigating human-carnivore conflicts within large semi-natural landscapes. We suggest developing site specific coexistence strategies and adopting non-lethal measures to safeguard carnivores, livestock and humans within shared landscapes.

Elephants in the neighborhood: patterns of crop-raiding by Asian elephants within a fragmented landscape of Eastern India

Loss of forest cover, rise in human populations and fragmentation of habitats leads to decline in biodiversity and extinction of large mammals globally. Elephants, being the largest of terrestrial mammals, symbolize global conservation programs and co-occur with humans within multiple-use landscapes of Asia and Africa. Within such shared landscapes, poaching, habitat loss and extent of human-elephant conflicts (HEC) affect survival and conservation of elephants. HEC are severe in South Asia with increasing attacks on humans, crop depredation and property damage. Such incidents reduce societal tolerance towards elephants and increase the risk of retaliation by local communities. We analyzed a 2-year dataset on crop depredation by Asian elephants (N = 380) events in North Bengal (eastern India). We also explored the effect of landscape, anthropogenic factors (area of forest, agriculture, distance to protected area, area of human settlements, riverine patches and human density) on the spatial occurrence of such incidents.Crop depredation showed a distinct nocturnal pattern (22.00-06:00) and majority of the incidents were recorded in the monsoon and post-monsoon seasons. Results of our spatial analysis suggest that crop depredation increased with an increase in the area of forest patches, agriculture, presence of riverine patches and human density. Probability of crop depredation further increased with decreasing distance from protected areas. Villages within 1.5 km of a forest patch were most affected. Crop raiding incidents suggest a deviation from the "high-risk high-gain male biased" foraging behavior and involved proportionately more mixed groups (57%) than lone bulls (43%). Demographic data suggest that mixed groups comprised an average of 23 individuals with adult and sub adult females, bulls and calves. Crop depredation and fatal elephant attacks on humans were spatially clustered with eastern, central and western parts of North Bengal identified as hotspots of HEC. Our results will help to prioritize mitigation measures such as prohibition of alcohol production within villages, improving condition of riverine patches, changing crop composition, fencing agriculture fields, implement early warning systems around protected areas and training local people on how to prevent conflicts.

Landscape predictors of human-leopard conflicts within multi-use areas of the Himalayan region

Conflict with humans is a significant source of mortality for large carnivores globally. With rapid loss of forest cover and anthropogenic impacts on their habitats, large carnivores are forced to occupy multi-use landscapes outside protected areas. We investigated 857 attacks on livestock in eastern Himalaya and 375 attacks in western Himalaya by leopards between 2015 and 2018. Multivariate analyses were conducted to identify the landscape features which increased the probability of livestock depredation by leopards. The risk of a leopard killing livestock increased within a heterogeneous landscape matrix comprising of both closed and open habitats (very dense forests, moderate dense forests, open forests, scrubland and non-forests). We used the results to map potential human-leopard conflict hotspots across parts of the Indian Himalayan region. Our spatial risk maps indicate pockets in the eastern, central and western part of eastern Himalaya and the central, northern part of western Himalaya as hotspots of human-leopard conflicts. Most of the attacks occurred when livestock were grazing freely within multi-use areas without supervision of a herder. Our results suggest that awareness about high risk areas, supervised grazing, and removing vegetation cover around human settlements should be initiated to reduce predation by leopards.

Revisiting the Woolly wolf (Canis lupus chanco) phylogeny in Himalaya: Addressing taxonomy, spatial extent and distribution of an ancient lineage in Asia

Of the sub-species of Holarctic wolf, the Woolly wolf (Canis lupus chanco) is uniquely adapted to atmospheric hypoxia and widely distributed across the Himalaya, Qinghai Tibetan Plateau (QTP) and Mongolia. Taxonomic ambiguity still exists for this sub-species because of complex evolutionary history anduse of limited wild samples across its range in Himalaya. We document for the first time population genetic structure and taxonomic affinity of the wolves across western and eastern Himalayan regions from samples collected from the wild (n = 19) using mitochondrial control region (225bp). We found two haplotypes in our data, one widely distributed in the Himalaya that was shared with QTP and the other confined to Himachal Pradesh and Uttarakhand in the western Himalaya, India. After combining our data withpublished sequences (n = 83), we observed 15 haplotypes. Some of these were shared among different locations from India to QTP and a few were private to geographic locations. A phylogenetic tree indicated that Woolly wolves from India, Nepal, QTP and Mongolia are basal to other wolves with shallow divergence (K2P; 0.000-0.044) and high bootstrap values. Demographic analyses based on mismatch distribution and Bayesian skyline plots (BSP) suggested a stable population over a long time (~million years) with signs of recent declines. Regional dominance of private haplotypes across its distribution range may indicate allopatric divergence. This may be due to differences in habitat characteristics, availability of different wild prey species and differential deglaciation within the range of the Woolly wolf during historic time. Presence of basal and shallow divergence within-clade along with unique ecological requirements and adaptation to hypoxia, the Woolly wolf of Himalaya, QTP, and Mongolian regions may be considered as a distinct an Evolutionary Significant Unit (ESU). Identifying management units (MUs) is needed within its distribution range using harmonized multiple genetic data for effective conservation planning.

Range extension and high elevation record for the endangered woolly flying squirrel Eupetaurus cinereus in Western Himalaya, India

The woolly flying squirrel (Eupetaurus cinereus Thomas, 1888) is one of the least-known endangered mammals of the Himalayas and recorded only from few localities at 2400–3600 m in Hindu Kush and North-Western Himalayas. We report first confirmed record of this species from Upper Bhagirathi Basin, Uttarakhand, Western Himalaya. The squirrel was photo-captured twice in camera traps placed in temperate and alpine habitats. The photo-capture at 4800 m is higher than the described upper elevation range limit of any other flying squirrels. Continuous monitoring would reveal the extent of threats to this rare species in its newly described range.

First camera trap record of Red Panda Ailurus fulgens (Cuvier, 1825) (Mammalia: Carnivora: Ailuridae) from Khangchendzonga, Sikkim, India

The Red Panda Ailurus fulgens (Cuvier, 1825) is recognized as one of the most elusive arboreal carnivores of the eastern Himalaya that is poorly documented.  We report the first camera trap record of the Red Panda from the Prek catchment of Khangchendzonga Biosphere Reserve (KBR) in Sikkim, India.  A total of three independent image captures were recorded during the sampling.  All occurrence records were exclusively from the sub-alpine habitat and restricted to an elevation range of 3,000–3,850 m.  This study not only accentuates the significance of sub-alpine habitats for the conservation of the Red Panda but also elucidates the importance of camera traps as an efficient sampling tool.  Through this study, we propose the requirement of a long-term study on the species within and outside the protected areas of Sikkim.

Assessment and prediction of spatial patterns of human-elephant conflicts in changing land cover scenarios of a human-dominated landscape in North Bengal

It is of utmost importance to research on the spatial patterns of human-wildlife conflicts to understand the underlying mechanism of such interactions, i.e. major land use changes and prominent ecological drivers. In the north eastern part of India there has been a disparity between nature, economic development and fragmentation of wildlife habitats leading to intense conflicts between humans and Asian elephants (Elephas maximus) in recent times. Both the elephant and human population have increased in the past few decades with large tracts of forests converted to commercial tea plantations, army camps and human settlements. We analyzed data maintained by the wildlife department on human deaths and injuries caused by elephant attacks between 2006–2016 to understand spatial and temporal patterns of human-elephant conflict, frequency and distribution. The average annual number of human deaths and injuries to elephant attacks between 2006 to 2016 was estimated to be 212 (SE 103) with the highest number of such incidents recorded in 2010–2011. Based on a grid based design of 5 km² and 25 km² resolution, the main spatial predictors of human-elephant conflicts identified through Maxent presence only models are annual mean precipitation, altitude, distance from protected area, area under forests, tea plantations and agriculture. Major land use changes were assessed for this region from 2008 to 2018 using satellite imageries in Arc GIS and a predicted imagery of 2028 was prepared using Idrisi Selva. Based on the 2018 imagery it was found that forest area had increased by 446 km² within 10 years (2008–2018) and the annual rate of change was 12%. Area under agriculture had reduced by 128 km² with an annual (-) rate of change of 2.5%. Area under tea plantation declined by 307 km² with an annual (-) rate of change of 12% whereas area under human settlements increased by 61 km² with an annual (-) rate of change of 44%. Hotspots of human-elephant conflicts were identified in an east west direction primarily around protected areas, tea plantations and along major riverine corridors. During informal interactions with farmers, tea estate labors it was revealed that local community members chased and harassed elephants from agriculture fields, human settlements under the influence of alcohol and thus were primary victims of fatal interactions. Our analytical approach can be replicated for other species in sites with similar issues of human-wildlife conflicts. The hotspot maps of conflict risk will help in developing appropriate mitigation strategies such as setting up early warning systems, restoration of wildlife corridors especially along dry river beds, using deterrents and barriers for vulnerable. Awareness about alcohol related incidents and basic biology of elephants should be organized regularly involving non-governmental organizations targeting the marginalized farmers and tea estate workers.

Species dilemma of musk deer (Moschus spp) in India: molecular data on cytochrome c oxidase I suggests distinct genetic lineage in Uttarakhand compared to other Moschus species

Musk deer are of high conservation priority owing to poaching pressure because of its musk pod. Representation of musk deer status using genetics is poorly documented in India, and it is not confirmed as to how many species of musk deer are present. We characterize for the first time, the genetic diversity of musk deer from Uttarakhand using Cytochrome Oxidase sub-unit (COI) gene (486 bp) and compared with the data available for other species. Results revealed the presence of six haplotypes in the Uttarakhand population amongst 17 sequences. Of these, 12 sequences shared the single haplotype. The intra-species sequences divergence was 0.003-0.017, whereas divergence with other species of musk deer was 0.071-0.081. Bayesian phylogenetic tree revealed that samples from Uttarakhand formed a separate clade with respect to other species of musk deer, whereas three species distributed in China clustered in the same clade and showed low sequences divergence, i.e., 0.002-0.061. Because of different ecomorph reported, we suggest using the barcoding based approach for inter and intra-species distinction and delineating species boundaries across the range for effective conservation. Besides, systematic classification, DNA barcoding would also help in dealing wildlife offence cases for disposal of the legal report in court.

Decreasing brown bear (Ursus arctos) habitat due to climate change in Central Asia and the Asian Highlands

Around the world, climate change has impacted many species. In this study, we used bioclimatic variables and biophysical layers of Central Asia and the Asian Highlands combined with presence data of brown bear (Ursus arctos) to understand their current distribution and predict their future distribution under the current rate of climate change. Our bioclimatic model showed that the current suitable habitat of brown bear encompasses 3,430,493 km2 in the study area, the majority of which (>65%) located in China. Our analyses demonstrated that suitable habitat will be reduced by 11% (378,861.30 km2) across Central Asia and the Asian Highlands by 2,050 due to climate change, predominantly (>90%) due to the changes in temperature and precipitation. The spatially averaged mean annual temperature of brown bear habitat is currently -1.2°C and predicted to increase to 1.6°C by 2,050. Mean annual precipitation in brown bear habitats is predicted to increase by 13% (from 406 to 459 mm) by 2,050. Such changes in two critical climatic variables may significantly affect the brown bear distribution, ethological repertoires, and physiological processes, which may increase their risk of extirpation in some areas. Approximately 32% (1,124,330 km2) of the total suitable habitat falls within protected areas, which was predicted to reduce to 1,103,912 km2 (1.8% loss) by 2,050. Future loss of suitable habitats inside the protected areas may force brown bears to move outside the protected areas thereby increasing their risk of mortality. Therefore, more protected areas should be established in the suitable brown bear habitats in future to sustain populations in this region. Furthermore, development of corridors is needed to connect habitats between protected areas of different countries in Central Asia. Such practices will facilitate climate migration and connectivity among populations and movement between and within countries.

Recent records of dhole (Cuon alpinus, Pallas 1811) in Uttarakhand, Western Himalaya, India

Camera trap photographs of solitary individuals of Asiatic wild dog or dholes (Cuon alpinus, Pallas 1811) have been recorded from Kheda Tal area in Uttarkashi district of Uttarakhand. This is the first photographic confirmation of the presence of this species in the Himalayan habitats of Uttarakhand. The presence of dholes here seems to be confined to a relatively small area of unprotected habitats affected by various anthropogenic uses. The population of endangered dhole is rapidly declining especially in Himalayan region. Thus, it is imperative that local stakeholders are aware of their presence, and it is highly recommended that investigations of the ecological parameters of this population are continued.

Understanding the cryptic introgression and mixed ancestry of Red Junglefowl in India

Red Junglefowls (RJFs), the wild progenitor of modern day chickens (DCs), are believed to be in genetic endangerment due to introgression of domestic genes through opportunistic matings with domestic or feral chickens. Previous studies from India reported rare hybridization of RJFs in the wild. However, RJF population genetic structure, pattern of gene flow and their admixture with DC populations are poorly understood at the landscape level. We conducted this study with a large sample size, covering the predicted natural distribution range of RJFs in India. We documented strong evidence of directional gene flow from DCs to free-ranging wild RJFs, with the Northeastern RJF population exhibiting the most genetic variants in their nuclear and mitochondrial genomes, indicating it to be the ancestral population from which early radiation may have occurred. The results provide evidence that landscape features do not act as a barrier to gene flow and the distribution pattern could not be explored due to physical sharing or exchange of wild birds in the past when forests were continuous across RJF range in India.

Understanding drivers of human-leopard conflicts in the Indian Himalayan region: Spatio-temporal patterns of conflicts and perception of local communities towards conserving large carnivores

Human killing is the decisive and most critical expression of human-leopard conflict and needs to be addressed sensitively to maintain local support for leopard conservation in India. This research was undertaken to investigate the ecological aspects of human killing and injury, spatial characteristic and pattern of such sites, temporal and seasonal trends of attacks and perception of local communities towards leopard in the Indian Himalayan region (IHR). We surveyed two sites i) Pauri Garhwal in the western part and ii) North Bengal (Dooars) in the eastern part of IHR, compiled secondary data on human-leopard conflict records and made field visits to (N = 101) conflict sites. We also conducted (N = 186) semi-structured questionnaire surveys in each of the sites to assess perception of local communities towards leopard. We analyzed the conflict data using rare events model in a binary logistic regression framework to understand spatial patterns of such incidents for Pauri Garhwal and North Bengal. The average number of injuries and deaths to leopard attacks in Pauri was estimated to be 11 (SE 1.13) and 3 (SE 0.6) per year between 2006-2016 whereas in North Bengal it was estimated to be 70 (SE 9.2) and 1.6 (SE 0.3) respectively between 2004-2016. About 97% of the leopard attacks in North Bengal and 60% of the leopard attacks in Pauri resulted in human injuries. Majority of the leopard attack victims in Pauri were children and young people, whereas in North Bengal it was middle aged tea estate workers. Attack on humans in Pauri were recorded mostly near areas with dense scrub cover whereas in North Bengal it was reported within tea-estates. The percentage of human deaths to leopard attacks in Pauri were higher (40%) compared to a mere (3%) in North Bengal. Forty-one percent of respondents in Pauri and 75% in North Bengal were positive towards presence and conservation of leopard. A predictive risk map revealed central and northern regions of Pauri Garhwal and protected areas, peripheral areas in central and south-western dooars (North Bengal) as high "human-leopard conflict risk zones". This analytical procedure can be adopted in other sites to identify potential human-carnivore conflict risk zones.

Cross-species screening of microsatellite markers for individual identification of snow petrel Pagodroma nivea and Wilson's storm petrel Oceanites oceanicus in Antarctica

Seabirds are important indicators of marine ecosystem health. Species within the order Procellariiformes are the most abundant seabird species group distributed from warm tropical to cold temperate regions including Antarctica. There is a paucity of information on basic biology of the pelagic seabird species nesting on the Antarctic continents, and long-term studies are required to gather data on their population demography, genetics and other ecological parameters. Under the 'Biology and Environmental Sciences' component of the Indian Antarctic programme, long-term monitoring of Antarctic biodiversity is being conducted. In this paper, we describe results of cross-species screening of a panel of 12 and 10 microsatellite markers in two relatively little studied seabird species in Antarctica, the snow petrel Pagodroma nivea and the Wilson's storm petrel Oceanites oceanicus, respectively. These loci showed high amplification success and moderate levels of polymorphism in snow petrel (mean no. of alleles 7.08 ± 3.01 and mean observed heterozygosity 0.35 ± 0.23), but low polymorphism in Wilson's storm petrel (mean no. of alleles 3.9 ± 1.3 and mean observed heterozygosity 0.28 ± 0.18). The results demonstrate that these panels can unambiguously identify individuals of both species (cumulative PIDsibs for snow petrel is 3.7 × 10-03 and Wilson's storm petrel is 1.9 × 10-02) from field-collected samples. This work forms a baseline for undertaking long-term genetic research of these Antarctic seabird species and provides critical insights into their population genetics.

<b>New distribution records of Elegant Water Shrew <I>Nectogale elegans</I> Milne-Edwards, 1870 (Mammalia: Eulipotyphla: Soricidae) from the western Himalaya, Uttarakhand, India</b>

Of the 13 known species of water shrews in the world, two water shrews are known from India, the Elegant Water Shrew Nectogale elegans and Himalayan Water Shrew Chimmarogale himalayica.  Of these, the Elegant Water Shrew was earlier reported only from streams of north Sikkim, and Arunachal Pradesh, India.  During the period 2014–2016, the Elegant Water Shrews were sighted at three different locations in Uttarakhand State in the western Himalayan region.  The present records are evidence for the broader range of distribution of Nectogale elegans in India indicating that the species is more widely distributed than previously thought.  We present the details of sightings, habitats and behavior of shrews that were recorded during our study on impact of climate change on the aquatic ecosystem of the Himalaya.

Pragmatic perspective on conservation genetics and demographic history of the last surviving population of Kashmir red deer (Cervus elaphus hanglu) in India

The hangul (Cervus elaphus hanglu) is of great conservation concern because it represents the easternmost and only hope for an Asiatic survivor of the red deer species in the Indian subcontinent. Despite the rigorous conservation efforts of the Department of Wildlife Protection in Jammu & Kashmir, the hangul population has experienced a severe decline in numbers and range contraction in the past few decades. The hangul population once abundant in the past has largely become confined to the Dachigam landscape, with a recent population estimate of 218 individuals. We investigated the genetic variability and demographic history of the hangul population and found that it has shown a relatively low diversity estimates when compared to other red deer populations of the world. Neutrality tests, which are used to evaluate demographic effects, did not support population expansion, and the multimodal pattern of mismatch distribution indicated that the hangul population is under demographic equilibrium. Furthermore, the hangul population did not exhibit any signature of bottleneck footprints in the past, and Coalescent Bayesian Skyline plot analysis revealed that the population had not experienced any dramatic changes in the effective population size over the last several thousand years. We observed a strong evidence of sub-structuring in the population, wherein the majority of individuals were assigned to different clusters in Bayesian cluster analysis. Population viability analysis demonstrated insignificant changes in the mean population size, with a positive growth rate projected for the next hundred years. We discuss the phylogenetic status of hangul for the first time among the other red deer subspecies of the world and strongly recommend to upgrade hangul conservation status under IUCN that should be discrete from the other red deer subspecies of the world to draw more conservation attention from national and international bodies.

Loss of genetic diversity and inbreeding in Kashmir red deer (Cervus elaphus hanglu) of Dachigam National Park, Jammu & Kashmir, India

Background

Hangul (Cervus elaphus hanglu), the eastern most subspecies of red deer, is now confined only to the mountains in the Kashmir region of Jammu & Kashmir State of India. It is of great conservation significance as this is the last and only hope for Asiatic survivor of the red deer species in India. Wild population of free ranging hangul deer inhabiting in and around Dachigam National Park was genetically assessed in order to account for constitutive genetic attributes of hangul population using microsatellite markers.

Results

In a pool of 36 multi-locus genotypes, 30 unique individuals were identified based on six microsatellite loci. The estimated cumulative probability of identity assuming all individuals were siblings (P_ID sibs) was 0.009 (9 in 1000). Altogether, 49 different alleles were observed with mean (± s.e.) allelic number of 8.17 ± 1.05, ranging from 5 to 11 per locus. The observed heterozygosity ranged between 0.08 and 0.83, with mean 0.40 ± 0.11 and the inbreeding coefficient ranged between −0.04 and 0.87 with mean 0.38 ± 0.15. Majority of loci (5/6) were found to be informative (PIC value > 0.5). All loci deviated from Hardy-Weinberg equilibrium except Ca-38 (P > 0.05) and none of the pairs of loci showed significant linkage disequilibrium except the single pair of Ca-30 and Ca-43 (P < 0.05).

Conclusions

The preliminary findings revealed that hangul population is significantly inbred and exhibited a low genetic diversity in comparison to other deer populations of the world. We suggest prioritizing the potential individuals retaining high heterozygosity for ex situ conservation and genetic monitoring of the hangul population should be initiated covering the entire distribution range to ensure the long term survival of hangul. We speculate further ignoring genetics attributes may lead to a detrimental effect which can negatively influence the reproductive fitness and survivorship of the hangul population in the wild.

Genetics driven interventions for ex situ conservation of red junglefowl (Gallus gallus murghi) populations in India

Genetics driven interventions (GDI) are imperative for ex situ conservation to exhort long-term sustenance of small and isolated populations in captivity as they are more prone to an increased extinction risk due to inbreeding and genetic drift. We investigated constitutive genetic attributes of four captive Red Junglefowl (RJF) populations in India, to facilitate the prioritization of the birds to formulate an effective breeding action plan. All the four RJF populations were found to be evident of significant inbreeding but none of them had exhibited any signature of bottleneck footprints in the recent past. Bayesian cluster analysis revealed three distinct groups among the four captive RJF populations. Interestingly, birds of Kufri population were assigned together with Gopalpur as well as with Morni populations, indicating their shared genetic ancestry. Among the four populations, Morni population displayed the richest genetic attributes and was therefore presumed as a key source of genetic variation. Nine birds of Morni population were relatively pure (q-value >0.98) and carried about 50% of the total private alleles of Morni population. Thus, being the foremost reservoir of allelic diversity, these nine birds may be selected for launching alien alleles to other RJF populations to rescue their loss of genetic diversity arising from inbreeding.