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Rees AP, Bange HW, Arévalo-Martínez DL, Artioli Y, Ashby DM, Brown I, Campen HI, Clark DR, Kitidis V, Lessin G, Tarran GA, Turley C. Nitrous oxide and methane in a changing Arctic Ocean. Ambio 2022; 51:398-410. [PMID: 34628596 PMCID: PMC8692636 DOI: 10.1007/s13280-021-01633-8] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/04/2021] [Revised: 08/13/2021] [Accepted: 09/15/2021] [Indexed: 05/25/2023]
Abstract
Human activities are changing the Arctic environment at an unprecedented rate resulting in rapid warming, freshening, sea ice retreat and ocean acidification of the Arctic Ocean. Trace gases such as nitrous oxide (N2O) and methane (CH4) play important roles in both the atmospheric reactivity and radiative budget of the Arctic and thus have a high potential to influence the region's climate. However, little is known about how these rapid physical and chemical changes will impact the emissions of major climate-relevant trace gases from the Arctic Ocean. The combined consequences of these stressors present a complex combination of environmental changes which might impact on trace gas production and their subsequent release to the Arctic atmosphere. Here we present our current understanding of nitrous oxide and methane cycling in the Arctic Ocean and its relevance for regional and global atmosphere and climate and offer our thoughts on how this might change over coming decades.
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Affiliation(s)
- Andrew P. Rees
- Plymouth Marine Laboratory, Prospect Place, The Hoe, Plymouth, PL1 3DH UK
| | - Hermann W. Bange
- GEOMAR Helmholtz-Zentrum Für Ozeanforschung Kiel, Chemische Ozeanographie, Düsternbrooker Weg 20, 24105 Kiel, Germany
| | - Damian L. Arévalo-Martínez
- GEOMAR Helmholtz-Zentrum Für Ozeanforschung Kiel, Chemische Ozeanographie, Düsternbrooker Weg 20, 24105 Kiel, Germany
| | - Yuri Artioli
- Plymouth Marine Laboratory, Prospect Place, The Hoe, Plymouth, PL1 3DH UK
| | - Dawn M. Ashby
- Plymouth Marine Laboratory, Prospect Place, The Hoe, Plymouth, PL1 3DH UK
| | - Ian Brown
- Plymouth Marine Laboratory, Prospect Place, The Hoe, Plymouth, PL1 3DH UK
| | - Hanna I. Campen
- GEOMAR Helmholtz-Zentrum Für Ozeanforschung Kiel, Chemische Ozeanographie, Düsternbrooker Weg 20, 24105 Kiel, Germany
| | - Darren R. Clark
- Plymouth Marine Laboratory, Prospect Place, The Hoe, Plymouth, PL1 3DH UK
| | - Vassilis Kitidis
- Plymouth Marine Laboratory, Prospect Place, The Hoe, Plymouth, PL1 3DH UK
| | - Gennadi Lessin
- Plymouth Marine Laboratory, Prospect Place, The Hoe, Plymouth, PL1 3DH UK
| | - Glen A. Tarran
- Plymouth Marine Laboratory, Prospect Place, The Hoe, Plymouth, PL1 3DH UK
| | - Carol Turley
- Plymouth Marine Laboratory, Prospect Place, The Hoe, Plymouth, PL1 3DH UK
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2
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Campen HI, Arévalo-Martínez DL, Artioli Y, Brown IJ, Kitidis V, Lessin G, Rees AP, Bange HW. The role of a changing Arctic Ocean and climate for the biogeochemical cycling of dimethyl sulphide and carbon monoxide. Ambio 2022; 51:411-422. [PMID: 34480730 PMCID: PMC8692525 DOI: 10.1007/s13280-021-01612-z] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/27/2021] [Revised: 08/03/2021] [Accepted: 08/03/2021] [Indexed: 05/20/2023]
Abstract
Dimethyl sulphide (DMS) and carbon monoxide (CO) are climate-relevant trace gases that play key roles in the radiative budget of the Arctic atmosphere. Under global warming, Arctic sea ice retreats at an unprecedented rate, altering light penetration and biological communities, and potentially affect DMS and CO cycling in the Arctic Ocean. This could have socio-economic implications in and beyond the Arctic region. However, little is known about CO production pathways and emissions in this region and the future development of DMS and CO cycling. Here we summarize the current understanding and assess potential future changes of DMS and CO cycling in relation to changes in sea ice coverage, light penetration, bacterial and microalgal communities, pH and physical properties. We suggest that production of DMS and CO might increase with ice melting, increasing light availability and shifting phytoplankton community. Among others, policy measures should facilitate large-scale process studies, coordinated long term observations and modelling efforts to improve our current understanding of the cycling and emissions of DMS and CO in the Arctic Ocean and of global consequences.
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Affiliation(s)
- Hanna I. Campen
- Department of Chemical Oceanography, GEOMAR Helmholtz Centre for Ocean Research Kiel, Düsternbrooker Weg 20, 24105 Kiel, Germany
| | - Damian L. Arévalo-Martínez
- Department of Chemical Oceanography, GEOMAR Helmholtz Centre for Ocean Research Kiel, Düsternbrooker Weg 20, 24105 Kiel, Germany
| | - Yuri Artioli
- Plymouth Marine Laboratory, Plymouth, PL1 3DH UK
| | - Ian J. Brown
- Plymouth Marine Laboratory, Plymouth, PL1 3DH UK
| | | | | | | | - Hermann W. Bange
- Department of Chemical Oceanography, GEOMAR Helmholtz Centre for Ocean Research Kiel, Düsternbrooker Weg 20, 24105 Kiel, Germany
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3
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Yang M, Smyth TJ, Kitidis V, Brown IJ, Wohl C, Yelland MJ, Bell TG. Natural variability in air-sea gas transfer efficiency of CO 2. Sci Rep 2021; 11:13584. [PMID: 34193883 PMCID: PMC8245487 DOI: 10.1038/s41598-021-92947-w] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/26/2021] [Accepted: 06/18/2021] [Indexed: 11/29/2022] Open
Abstract
The flux of CO2 between the atmosphere and the ocean is often estimated as the air–sea gas concentration difference multiplied by the gas transfer velocity (K660). The first order driver for K660 over the ocean is wind through its influence on near surface hydrodynamics. However, field observations have shown substantial variability in the wind speed dependencies of K660. In this study we measured K660 with the eddy covariance technique during a ~ 11,000 km long Southern Ocean transect. In parallel, we made a novel measurement of the gas transfer efficiency (GTE) based on partial equilibration of CO2 using a Segmented Flow Coil Equilibrator system. GTE varied by 20% during the transect, was distinct in different water masses, and related to K660. At a moderate wind speed of 7 m s−1, K660 associated with high GTE exceeded K660 with low GTE by 30% in the mean. The sensitivity of K660 towards GTE was stronger at lower wind speeds and weaker at higher wind speeds. Naturally-occurring organics in seawater, some of which are surface active, may be the cause of the variability in GTE and in K660. Neglecting these variations could result in biases in the computed air–sea CO2 fluxes.
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Affiliation(s)
- Mingxi Yang
- Plymouth Marine Laboratory, Prospect Place, Plymouth, UK.
| | | | | | - Ian J Brown
- Plymouth Marine Laboratory, Prospect Place, Plymouth, UK
| | - Charel Wohl
- Plymouth Marine Laboratory, Prospect Place, Plymouth, UK
| | | | - Thomas G Bell
- Plymouth Marine Laboratory, Prospect Place, Plymouth, UK
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4
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Kitidis V, Shutler JD, Ashton I, Warren M, Brown I, Findlay H, Hartman SE, Sanders R, Humphreys M, Kivimäe C, Greenwood N, Hull T, Pearce D, McGrath T, Stewart BM, Walsham P, McGovern E, Bozec Y, Gac JP, van Heuven SMAC, Hoppema M, Schuster U, Johannessen T, Omar A, Lauvset SK, Skjelvan I, Olsen A, Steinhoff T, Körtzinger A, Becker M, Lefevre N, Diverrès D, Gkritzalis T, Cattrijsse A, Petersen W, Voynova YG, Chapron B, Grouazel A, Land PE, Sharples J, Nightingale PD. Winter weather controls net influx of atmospheric CO 2 on the north-west European shelf. Sci Rep 2019; 9:20153. [PMID: 31882779 PMCID: PMC6934492 DOI: 10.1038/s41598-019-56363-5] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/04/2019] [Accepted: 12/06/2019] [Indexed: 11/08/2022] Open
Abstract
Shelf seas play an important role in the global carbon cycle, absorbing atmospheric carbon dioxide (CO2) and exporting carbon (C) to the open ocean and sediments. The magnitude of these processes is poorly constrained, because observations are typically interpolated over multiple years. Here, we used 298500 observations of CO2 fugacity (fCO2) from a single year (2015), to estimate the net influx of atmospheric CO2 as 26.2 ± 4.7 Tg C yr-1 over the open NW European shelf. CO2 influx from the atmosphere was dominated by influx during winter as a consequence of high winds, despite a smaller, thermally-driven, air-sea fCO2 gradient compared to the larger, biologically-driven summer gradient. In order to understand this climate regulation service, we constructed a carbon-budget supplemented by data from the literature, where the NW European shelf is treated as a box with carbon entering and leaving the box. This budget showed that net C-burial was a small sink of 1.3 ± 3.1 Tg C yr-1, while CO2 efflux from estuaries to the atmosphere, removed the majority of river C-inputs. In contrast, the input from the Baltic Sea likely contributes to net export via the continental shelf pump and advection (34.4 ± 6.0 Tg C yr-1).
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Affiliation(s)
| | - Jamie D Shutler
- University of Exeter, College of Life and Environmental Sciences, Exeter, UK
| | - Ian Ashton
- University of Exeter, College of Life and Environmental Sciences, Exeter, UK
| | | | - Ian Brown
- Plymouth Marine Laboratory, Plymouth, UK
| | | | | | | | - Matthew Humphreys
- Ocean and Earth Science, University of Southampton, Southampton, UK
- School of Environmental Sciences, University of East Anglia, Norwich, UK
| | | | - Naomi Greenwood
- Centre for Environment Fisheries and Aquaculture Science (Cefas), Lowestoft, UK
| | - Tom Hull
- Centre for Environment Fisheries and Aquaculture Science (Cefas), Lowestoft, UK
| | - David Pearce
- Centre for Environment Fisheries and Aquaculture Science (Cefas), Lowestoft, UK
| | | | | | | | | | - Yann Bozec
- Station Biologique de Roscoff, UMR CNRS - UPMC 7144 - Equipe Chimie Marine, Roscoff, France
| | - Jean-Philippe Gac
- Station Biologique de Roscoff, UMR CNRS - UPMC 7144 - Equipe Chimie Marine, Roscoff, France
| | | | - Mario Hoppema
- Alfred Wegener Institute, Helmholtz Centre for Polar and Marine Research, Bremerhaven, Germany
| | - Ute Schuster
- University of Exeter, College of Life and Environmental Sciences, Exeter, UK
| | - Truls Johannessen
- Geophysical Institute, University of Bergen and Bjerknes Center for Climate Research, Bergen, Norway
| | - Abdirahman Omar
- NORCE Norwegian Research Centre, Bjerknes Center for Climate Research, Bergen, Norway
| | - Siv K Lauvset
- NORCE Norwegian Research Centre, Bjerknes Center for Climate Research, Bergen, Norway
| | - Ingunn Skjelvan
- NORCE Norwegian Research Centre, Bjerknes Center for Climate Research, Bergen, Norway
| | - Are Olsen
- Geophysical Institute, University of Bergen and Bjerknes Center for Climate Research, Bergen, Norway
| | | | - Arne Körtzinger
- GEOMAR Helmholtz Centre for Ocean Research Kiel, Kiel, Germany
| | - Meike Becker
- GEOMAR Helmholtz Centre for Ocean Research Kiel, Kiel, Germany
- Geophysical Institute, University of Bergen and Bjerknes Center for Climate Research, Bergen, Norway
| | - Nathalie Lefevre
- Sorbonne Universités (UPMC, Univ Paris 06)-IRD-CNRS-MNHN, LOCEAN, Paris, France
| | - Denis Diverrès
- Institut de Recherche pour le Développement (IRD), centre de Bretagne, Plouzané, France
| | | | | | - Wilhelm Petersen
- Helmholtz Zentrum Geesthacht, Centre for Materials and Coastal Research, Geesthacht, Germany
| | - Yoana G Voynova
- Helmholtz Zentrum Geesthacht, Centre for Materials and Coastal Research, Geesthacht, Germany
| | - Bertrand Chapron
- Institut Francais Recherche Pour ĹExploitation de la Mer, Pointe du Diable, 29280, Plouzané, France
| | - Antoine Grouazel
- Institut Francais Recherche Pour ĹExploitation de la Mer, Pointe du Diable, 29280, Plouzané, France
| | | | - Jonathan Sharples
- University of Liverpool, School of Environmental Sciences, Liverpool, UK
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5
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Rérolle VMC, Achterberg EP, Ribas-Ribas M, Kitidis V, Brown I, Bakker DCE, Lee GA, Mowlem MC. High Resolution pH Measurements Using a Lab-on-Chip Sensor in Surface Waters of Northwest European Shelf Seas. Sensors (Basel) 2018; 18:s18082622. [PMID: 30103397 PMCID: PMC6111729 DOI: 10.3390/s18082622] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 07/02/2018] [Revised: 07/29/2018] [Accepted: 08/04/2018] [Indexed: 01/30/2023]
Abstract
Increasing atmospheric CO2 concentrations are resulting in a reduction in seawater pH, with potential detrimental consequences for marine organisms. Improved efforts are required to monitor the anthropogenically driven pH decrease in the context of natural pH variations. We present here a high resolution surface water pH data set obtained in summer 2011 in North West European Shelf Seas. The aim of our paper is to demonstrate the successful deployment of the pH sensor, and discuss the carbonate chemistry dynamics of surface waters of Northwest European Shelf Seas using pH and ancillary data. The pH measurements were undertaken using spectrophotometry with a Lab-on-Chip pH sensor connected to the underway seawater supply of the ship. The main processes controlling the pH distribution along the ship’s transect, and their relative importance, were determined using a statistical approach. The pH sensor allowed 10 measurements h−1 with a precision of 0.001 pH units and a good agreement with pH calculated from a pair of discretely sampled carbonate variables dissolved inorganic carbon (DIC), total alkalinity (TA) and partial pressure of CO2 (pCO2) (e.g., pHDICpCO2). For this summer cruise, the biological activity formed the main control on the pH distribution along the cruise transect. This study highlights the importance of high quality and high resolution pH measurements for the assessment of carbonate chemistry dynamics in marine waters.
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Affiliation(s)
- Victoire M C Rérolle
- National Oceanography Centre, Southampton, University of Southampton, Southampton SO14 3ZH, UK.
| | - Eric P Achterberg
- National Oceanography Centre, Southampton, University of Southampton, Southampton SO14 3ZH, UK.
- GEOMAR Helmholtz Centre for Ocean Research Kiel, 24148 Kiel, Germany.
| | - Mariana Ribas-Ribas
- National Oceanography Centre, Southampton, University of Southampton, Southampton SO14 3ZH, UK.
- Institute for Chemistry and Biology of the Marine Environment, University of Oldenburg, 26382 Wilhelmshaven, Germany.
| | - Vassilis Kitidis
- Plymouth Marine Laboratory, Prospect Place, Plymouth PL1 3DH, UK.
| | - Ian Brown
- Plymouth Marine Laboratory, Prospect Place, Plymouth PL1 3DH, UK.
| | - Dorothee C E Bakker
- Centre of Ocean and Atmospheric Sciences, School of Environmental Sciences, University of East Anglia, Norwich NR4 7TJ, UK.
| | - Gareth A Lee
- Centre of Ocean and Atmospheric Sciences, School of Environmental Sciences, University of East Anglia, Norwich NR4 7TJ, UK.
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6
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Keul N, Peijnenburg KTCA, Andersen N, Kitidis V, Goetze E, Schneider RR. Pteropods are excellent recorders of surface temperature and carbonate ion concentration. Sci Rep 2017; 7:12645. [PMID: 28974691 PMCID: PMC5626693 DOI: 10.1038/s41598-017-11708-w] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/30/2017] [Accepted: 08/29/2017] [Indexed: 11/19/2022] Open
Abstract
Pteropods are among the first responders to ocean acidification and warming, but have not yet been widely explored as carriers of marine paleoenvironmental signals. In order to characterize the stable isotopic composition of aragonitic pteropod shells and their variation in response to climate change parameters, such as seawater temperature, pteropod shells (Heliconoides inflatus) were collected along a latitudinal transect in the Atlantic Ocean (31° N to 38° S). Comparison of shell oxygen isotopic composition to depth changes in the calculated aragonite equilibrium oxygen isotope values implies shallow calcification depths for H. inflatus (75 m). This species is therefore a good potential proxy carrier for past variations in surface ocean properties. Furthermore, we identified pteropod shells to be excellent recorders of climate change, as carbonate ion concentration and temperature in the upper water column have dominant influences on pteropod shell carbon and oxygen isotopic composition. These results, in combination with a broad distribution and high abundance, make the pteropod species studied here, H. inflatus, a promising new proxy carrier in paleoceanography.
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Affiliation(s)
- N Keul
- Institute of Geosciences, Christian-Albrechts-Universität zu Kiel, Ludewig-Meyn-Str.10, 24118, Kiel, Germany.
| | - K T C A Peijnenburg
- Naturalis Biodiversity Center, P.O. Box 9517, 2300 RA, Leiden, The Netherlands.,Institute for Biodiversity and Ecosystem Dynamics (IBED), University of Amsterdam, P.O. Box 94248, 1090 GE, Amsterdam, The Netherlands
| | - N Andersen
- Leibniz-Labor für Altersbestimmung und Isotopenforschung, Christian-Albrechts-Universität zu Kiel, Max-Eyth-Str.11-13, 24118, Kiel, Germany
| | - V Kitidis
- Plymouth Marine Laboratory, Plymouth, PL1 3DH, United Kingdom
| | - E Goetze
- Department of Oceanography, University of Hawai'i at Mānoa, 1000 Pope Road, Honolulu, HI, 96822, USA
| | - R R Schneider
- Institute of Geosciences, Christian-Albrechts-Universität zu Kiel, Ludewig-Meyn-Str.10, 24118, Kiel, Germany
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7
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Aldridge JN, Lessin G, Amoudry LO, Hicks N, Hull T, Klar JK, Kitidis V, McNeill CL, Ingels J, Parker ER, Silburn B, Silva T, Sivyer DB, Smith HEK, Widdicombe S, Woodward EMS, van der Molen J, Garcia L, Kröger S. Comparing benthic biogeochemistry at a sandy and a muddy site in the Celtic Sea using a model and observations. Biogeochemistry 2017; 135:155-182. [PMID: 32009696 PMCID: PMC6961523 DOI: 10.1007/s10533-017-0367-0] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/31/2016] [Accepted: 07/22/2017] [Indexed: 06/10/2023]
Abstract
Results from a 1D setup of the European Regional Seas Ecosystem Model (ERSEM) biogeochemical model were compared with new observations collected under the UK Shelf Seas Biogeochemistry (SSB) programme to assess model performance and clarify elements of shelf-sea benthic biogeochemistry and carbon cycling. Observations from two contrasting sites (muddy and sandy) in the Celtic Sea in otherwise comparable hydrographic conditions were considered, with the focus on the benthic system. A standard model parameterisation with site-specific light and nutrient adjustments was used, along with modifications to the within-seabed diffusivity to accommodate the modelling of permeable (sandy) sediments. Differences between modelled and observed quantities of organic carbon in the bed were interpreted to suggest that a large part (>90%) of the observed benthic organic carbon is biologically relatively inactive. Evidence on the rate at which this inactive fraction is produced will constitute important information to quantify offshore carbon sequestration. Total oxygen uptake and oxic layer depths were within the range of the measured values. Modelled depth average pore water concentrations of ammonium, phosphate and silicate were typically 5-20% of observed values at the muddy site due to an underestimate of concentrations associated with the deeper sediment layers. Model agreement for these nutrients was better at the sandy site, which had lower pore water concentrations, especially deeper in the sediment. Comparison of pore water nitrate with observations had added uncertainty, as the results from process studies at the sites indicated the dominance of the anammox pathway for nitrogen removal; a pathway that is not included in the model. Macrofaunal biomasses were overestimated, although a model run with increased macrofaunal background mortality rates decreased macrofaunal biomass and improved agreement with observations. The decrease in macrofaunal biomass was compensated by an increase in meiofaunal biomass such that total oxygen demand remained within the observed range. The permeable sediment modification reproduced some of the observed behaviour of oxygen penetration depth at the sandy site. It is suggested that future development in ERSEM benthic modelling should focus on: (1) mixing and degradation rates of benthic organic matter, (2) validation of benthic faunal biomass against large scale spatial datasets, (3) incorporation of anammox in the benthic nitrogen cycle, and (4) further developments to represent permeable sediment processes.
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Affiliation(s)
- J. N. Aldridge
- Centre for Environment, Fisheries and Aquaculture Science, Lowestoft, NR33 0HT UK
| | - G. Lessin
- Plymouth Marine Laboratory, Prospect Place, The Hoe, Plymouth, PL1 3DH UK
| | - L. O. Amoudry
- National Oceanography Centre, Joseph Proudman Building, 6 Brownlow Street, Liverpool, L3 5DA UK
| | - N. Hicks
- Scottish Association for Marine Science, Scottish Marine Institute, Oban, Argyll, PA37 1QA UK
| | - T. Hull
- Centre for Environment, Fisheries and Aquaculture Science, Lowestoft, NR33 0HT UK
| | - J. K. Klar
- Ocean and Earth Science, National Oceanography Centre, University of Southampton, Southampton, SO14 3ZH UK
- LEGOS, University of Toulouse, IRD, CNES, CNRS, UPS, 14 avenue Edouard Belin, 31400 Toulouse, France
| | - V. Kitidis
- Plymouth Marine Laboratory, Prospect Place, The Hoe, Plymouth, PL1 3DH UK
| | - C. L. McNeill
- Plymouth Marine Laboratory, Prospect Place, The Hoe, Plymouth, PL1 3DH UK
| | - J. Ingels
- Coastal and Marine Laboratory, Florida State University, 3618 Coastal Highway 98, St Teresa, 32358 FL USA
| | - E. R. Parker
- Centre for Environment, Fisheries and Aquaculture Science, Lowestoft, NR33 0HT UK
| | - B. Silburn
- Centre for Environment, Fisheries and Aquaculture Science, Lowestoft, NR33 0HT UK
| | - T. Silva
- Centre for Environment, Fisheries and Aquaculture Science, Lowestoft, NR33 0HT UK
| | - D. B. Sivyer
- Centre for Environment, Fisheries and Aquaculture Science, Lowestoft, NR33 0HT UK
| | - H. E. K. Smith
- Ocean and Earth Science, National Oceanography Centre, University of Southampton, Southampton, SO14 3ZH UK
| | - S. Widdicombe
- Plymouth Marine Laboratory, Prospect Place, The Hoe, Plymouth, PL1 3DH UK
| | - E. M. S. Woodward
- Plymouth Marine Laboratory, Prospect Place, The Hoe, Plymouth, PL1 3DH UK
| | - J. van der Molen
- Centre for Environment, Fisheries and Aquaculture Science, Lowestoft, NR33 0HT UK
| | - L. Garcia
- Centre for Environment, Fisheries and Aquaculture Science, Lowestoft, NR33 0HT UK
| | - S. Kröger
- Centre for Environment, Fisheries and Aquaculture Science, Lowestoft, NR33 0HT UK
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8
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Thompson CEL, Silburn B, Williams ME, Hull T, Sivyer D, Amoudry LO, Widdicombe S, Ingels J, Carnovale G, McNeill CL, Hale R, Marchais CL, Hicks N, Smith HEK, Klar JK, Hiddink JG, Kowalik J, Kitidis V, Reynolds S, Woodward EMS, Tait K, Homoky WB, Kröger S, Bolam S, Godbold JA, Aldridge J, Mayor DJ, Benoist NMA, Bett BJ, Morris KJ, Parker ER, Ruhl HA, Statham PJ, Solan M. An approach for the identification of exemplar sites for scaling up targeted field observations of benthic biogeochemistry in heterogeneous environments. Biogeochemistry 2017; 135:1-34. [PMID: 32009689 PMCID: PMC6961521 DOI: 10.1007/s10533-017-0366-1] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/02/2016] [Accepted: 06/08/2017] [Indexed: 05/16/2023]
Abstract
Continental shelf sediments are globally important for biogeochemical activity. Quantification of shelf-scale stocks and fluxes of carbon and nutrients requires the extrapolation of observations made at limited points in space and time. The procedure for selecting exemplar sites to form the basis of this up-scaling is discussed in relation to a UK-funded research programme investigating biogeochemistry in shelf seas. A three-step selection process is proposed in which (1) a target area representative of UK shelf sediment heterogeneity is selected, (2) the target area is assessed for spatial heterogeneity in sediment and habitat type, bed and water column structure and hydrodynamic forcing, and (3) study sites are selected within this target area encompassing the range of spatial heterogeneity required to address key scientific questions regarding shelf scale biogeochemistry, and minimise confounding variables. This led to the selection of four sites within the Celtic Sea that are significantly different in terms of their sediment, bed structure, and macrofaunal, meiofaunal and microbial community structures and diversity, but have minimal variations in water depth, tidal and wave magnitudes and directions, temperature and salinity. They form the basis of a research cruise programme of observation, sampling and experimentation encompassing the spring bloom cycle. Typical variation in key biogeochemical, sediment, biological and hydrodynamic parameters over a pre to post bloom period are presented, with a discussion of anthropogenic influences in the region. This methodology ensures the best likelihood of site-specific work being useful for up-scaling activities, increasing our understanding of benthic biogeochemistry at the UK-shelf scale.
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Affiliation(s)
- C. E. L. Thompson
- Ocean and Earth Science, University of Southampton, National Oceanography Centre, Southampton, SO14 3ZH UK
| | - B. Silburn
- Centre for Environment, Fisheries and Aquaculture Science, Pakefield Road, Lowestoft, NR33 0HT UK
| | - M. E. Williams
- National Oceanography Centre, 6 Brownlow St, Liverpool, L3 5DA UK
| | - T. Hull
- Centre for Environment, Fisheries and Aquaculture Science, Pakefield Road, Lowestoft, NR33 0HT UK
| | - D. Sivyer
- Centre for Environment, Fisheries and Aquaculture Science, Pakefield Road, Lowestoft, NR33 0HT UK
| | - L. O. Amoudry
- National Oceanography Centre, 6 Brownlow St, Liverpool, L3 5DA UK
| | - S. Widdicombe
- Plymouth Marine Laboratory, Prospect Place, The Hoe, Plymouth, PL1 3DH UK
| | - J. Ingels
- Plymouth Marine Laboratory, Prospect Place, The Hoe, Plymouth, PL1 3DH UK
| | - G. Carnovale
- Plymouth Marine Laboratory, Prospect Place, The Hoe, Plymouth, PL1 3DH UK
| | - C. L. McNeill
- Plymouth Marine Laboratory, Prospect Place, The Hoe, Plymouth, PL1 3DH UK
| | - R. Hale
- Ocean and Earth Science, University of Southampton, National Oceanography Centre, Southampton, SO14 3ZH UK
| | - C. Laguionie Marchais
- National Oceanography Centre, University of Southampton Waterfront Campus, European Way, Southampton, SO14 3ZH UK
| | - N. Hicks
- Scottish Association for Marine Science, Scottish Marine Institute, Oban, Argyll, PA37 1QA UK
| | - H. E. K. Smith
- National Oceanography Centre, University of Southampton Waterfront Campus, European Way, Southampton, SO14 3ZH UK
| | - J. K. Klar
- Ocean and Earth Science, University of Southampton, National Oceanography Centre, Southampton, SO14 3ZH UK
- LEGOS, University of Toulouse, IRDm CNES, CNRS, UPS, 14 av. Edouard Belin, 31400 Toulouse, France
| | - J. G. Hiddink
- School of Ocean Sciences, Bangor University, Menai Bridge, LL59 5AB UK
| | - J. Kowalik
- Navama – Technology for Nature, Landshuter Allee 8, 80637 Munich, Germany
| | - V. Kitidis
- Plymouth Marine Laboratory, Prospect Place, The Hoe, Plymouth, PL1 3DH UK
| | - S. Reynolds
- School of Earth and Environmental Sciences, University of Portsmouth, Burnaby Road, Portsmouth, PO1 3QL UK
| | - E. M. S. Woodward
- Plymouth Marine Laboratory, Prospect Place, The Hoe, Plymouth, PL1 3DH UK
| | - K. Tait
- Plymouth Marine Laboratory, Prospect Place, The Hoe, Plymouth, PL1 3DH UK
| | - W. B. Homoky
- Department of Earth Sciences, University of Oxford, South Parks Road, Oxford, OX1 3AN UK
| | - S. Kröger
- Centre for Environment, Fisheries and Aquaculture Science, Pakefield Road, Lowestoft, NR33 0HT UK
| | - S. Bolam
- Centre for Environment, Fisheries and Aquaculture Science, Pakefield Road, Lowestoft, NR33 0HT UK
| | - J. A. Godbold
- Ocean and Earth Science, University of Southampton, National Oceanography Centre, Southampton, SO14 3ZH UK
- Biological Sciences, University of Southampton, Life Sciences Building, Highfield, Southampton SO17 1BJ UK
| | - J. Aldridge
- Centre for Environment, Fisheries and Aquaculture Science, Pakefield Road, Lowestoft, NR33 0HT UK
| | - D. J. Mayor
- National Oceanography Centre, University of Southampton Waterfront Campus, European Way, Southampton, SO14 3ZH UK
| | - N. M. A. Benoist
- Ocean and Earth Science, University of Southampton, National Oceanography Centre, Southampton, SO14 3ZH UK
| | - B. J. Bett
- National Oceanography Centre, University of Southampton Waterfront Campus, European Way, Southampton, SO14 3ZH UK
| | - K. J. Morris
- National Oceanography Centre, University of Southampton Waterfront Campus, European Way, Southampton, SO14 3ZH UK
| | - E. R. Parker
- Centre for Environment, Fisheries and Aquaculture Science, Pakefield Road, Lowestoft, NR33 0HT UK
| | - H. A. Ruhl
- National Oceanography Centre, University of Southampton Waterfront Campus, European Way, Southampton, SO14 3ZH UK
| | - P. J. Statham
- Ocean and Earth Science, University of Southampton, National Oceanography Centre, Southampton, SO14 3ZH UK
| | - M. Solan
- Ocean and Earth Science, University of Southampton, National Oceanography Centre, Southampton, SO14 3ZH UK
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9
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Hicks N, Ubbara GR, Silburn B, Smith HEK, Kröger S, Parker ER, Sivyer D, Kitidis V, Hatton A, Mayor DJ, Stahl H. Oxygen dynamics in shelf seas sediments incorporating seasonal variability. Biogeochemistry 2017; 135:35-47. [PMID: 32009690 PMCID: PMC6961513 DOI: 10.1007/s10533-017-0326-9] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/31/2016] [Accepted: 03/22/2017] [Indexed: 05/28/2023]
Abstract
Shelf sediments play a vital role in global biogeochemical cycling and are particularly important areas of oxygen consumption and carbon mineralisation. Total benthic oxygen uptake, the sum of diffusive and faunal mediated uptake, is a robust proxy to quantify carbon mineralisation. However, oxygen uptake rates are dynamic, due to the diagenetic processes within the sediment, and can be spatially and temporally variable. Four benthic sites in the Celtic Sea, encompassing gradients of cohesive to permeable sediments, were sampled over four cruises to capture seasonal and spatial changes in oxygen dynamics. Total oxygen uptake (TOU) rates were measured through a suite of incubation experiments and oxygen microelectrode profiles were taken across all four benthic sites to provide the oxygen penetration depth and diffusive oxygen uptake (DOU) rates. The difference between TOU and DOU allowed for quantification of the fauna mediated oxygen uptake and diffusive uptake. High resolution measurements showed clear seasonal and spatial trends, with higher oxygen uptake rates measured in cohesive sediments compared to the permeable sediment. The significant differences in oxygen dynamics between the sediment types were consistent between seasons, with increasing oxygen consumption during and after the phytoplankton bloom. Carbon mineralisation in shelf sediments is strongly influenced by sediment type and seasonality.
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Affiliation(s)
- N. Hicks
- Scottish Association for Marine Science, Scottish Marine Institute, Oban, Argyll, PA37 1QA UK
| | - G. R. Ubbara
- Scottish Association for Marine Science, Scottish Marine Institute, Oban, Argyll, PA37 1QA UK
- Present Address: Department of Chemistry, University of Glasgow, University Avenue, Joseph Black Building, Glasgow, G12 8QQ UK
| | - B. Silburn
- Centre for Environment, Fisheries and Aquaculture Science, Lowestoft, NR33 0HT UK
| | - H. E. K. Smith
- Ocean Biogeochemistry and Ecosystems, National Oceanography Centre, Southampton, SO14 3ZH UK
| | - S. Kröger
- Centre for Environment, Fisheries and Aquaculture Science, Lowestoft, NR33 0HT UK
| | - E. R. Parker
- Centre for Environment, Fisheries and Aquaculture Science, Lowestoft, NR33 0HT UK
| | - D. Sivyer
- Centre for Environment, Fisheries and Aquaculture Science, Lowestoft, NR33 0HT UK
| | - V. Kitidis
- Plymouth Marine Laboratory, Prospect Place, The Hoe, Plymouth, PL1 3DH UK
| | - A. Hatton
- Scottish Association for Marine Science, Scottish Marine Institute, Oban, Argyll, PA37 1QA UK
| | - D. J. Mayor
- Ocean Biogeochemistry and Ecosystems, National Oceanography Centre, Southampton, SO14 3ZH UK
| | - H. Stahl
- Scottish Association for Marine Science, Scottish Marine Institute, Oban, Argyll, PA37 1QA UK
- College of Sustainability Sciences and Humanities, Zayed University, Dubai, United Arab Emirates
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10
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Trimmer M, Chronopoulou PM, Maanoja ST, Upstill-Goddard RC, Kitidis V, Purdy KJ. Nitrous oxide as a function of oxygen and archaeal gene abundance in the North Pacific. Nat Commun 2016; 7:13451. [PMID: 27905393 PMCID: PMC5146275 DOI: 10.1038/ncomms13451] [Citation(s) in RCA: 43] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/10/2016] [Accepted: 10/05/2016] [Indexed: 11/19/2022] Open
Abstract
Oceanic oxygen minimum zones are strong sources of the potent greenhouse gas N2O but its microbial source is unclear. We characterized an exponential response in N2O production to decreasing oxygen between 1 and 30 μmol O2 l−1 within and below the oxycline using 15NO2−, a relationship that held along a 550 km offshore transect in the North Pacific. Differences in the overall magnitude of N2O production were accounted for by archaeal functional gene abundance. A one-dimensional (1D) model, parameterized with our experimentally derived exponential terms, accurately reproduces N2O profiles in the top 350 m of water column and, together with a strong 45N2O signature indicated neither canonical nor nitrifier–denitrification production while statistical modelling supported production by archaea, possibly via hybrid N2O formation. Further, with just archaeal N2O production, we could balance high-resolution estimates of sea-to-air N2O exchange. Hence, a significant source of N2O, previously described as leakage from bacterial ammonium oxidation, is better described by low-oxygen archaeal production at the oxygen minimum zone's margins. Understanding the production processes behind oceanic sources of nitrous oxide (N2O), a potent greenhouse gas, is of critical importance. Here, the authors reveal an archaeal-mediated N2O production pathway in the North Pacific, which increases exponentially with decreasing oxygen.
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Affiliation(s)
- Mark Trimmer
- School of Biological and Chemical Sciences, Queen Mary University of London, London E1 4NS, UK
| | | | - Susanna T Maanoja
- School of Biological and Chemical Sciences, Queen Mary University of London, London E1 4NS, UK
| | - Robert C Upstill-Goddard
- School of Marine Science and Technology, Ridley Building, University of Newcastle, Newcastle upon, Tyne NE1 7RU, UK
| | - Vassilis Kitidis
- Plymouth Marine Laboratory, Prospect Place, West Hoe, Plymouth PL1 3DH, UK
| | - Kevin J Purdy
- School of Life Sciences, University of Warwick, Coventry CV4 7AL, UK
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11
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Serret P, Robinson C, Aranguren-Gassis M, García-Martín EE, Gist N, Kitidis V, Lozano J, Stephens J, Harris C, Thomas R. Both respiration and photosynthesis determine the scaling of plankton metabolism in the oligotrophic ocean. Nat Commun 2015; 6:6961. [PMID: 25908109 PMCID: PMC4462842 DOI: 10.1038/ncomms7961] [Citation(s) in RCA: 27] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/16/2014] [Accepted: 03/19/2015] [Indexed: 11/09/2022] Open
Abstract
Despite its importance to ocean-climate interactions, the metabolic state of the oligotrophic ocean has remained controversial for >15 years. Positions in the debate are that it is either hetero- or autotrophic, which suggests either substantial unaccounted for organic matter inputs, or that all available photosynthesis (P) estimations (including (14)C) are biased. Here we show the existence of systematic differences in the metabolic state of the North (heterotrophic) and South (autotrophic) Atlantic oligotrophic gyres, resulting from differences in both P and respiration (R). The oligotrophic ocean is neither auto- nor heterotrophic, but functionally diverse. Our results show that the scaling of plankton metabolism by generalized P:R relationships that has sustained the debate is biased, and indicate that the variability of R, and not only of P, needs to be considered in regional estimations of the ocean's metabolic state.
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Affiliation(s)
- Pablo Serret
- Departamento de Ecología y Biología animal, Universidad de Vigo, E36310 Vigo, Spain.,Estación de Ciencias Marinas de Toralla, Universidad de Vigo, Toralla island, E-36331 Vigo, Spain
| | - Carol Robinson
- School of Environmental Sciences, University of East Anglia, Norwich Research Park, Norwich NR4 7TJ, UK
| | | | | | - Niki Gist
- Plymouth Marine Laboratory, Prospect Place, Plymouth PL1 3DH, UK
| | - Vassilis Kitidis
- Plymouth Marine Laboratory, Prospect Place, Plymouth PL1 3DH, UK
| | - José Lozano
- Departamento de Ecología y Biología animal, Universidad de Vigo, E36310 Vigo, Spain.,Estación de Ciencias Marinas de Toralla, Universidad de Vigo, Toralla island, E-36331 Vigo, Spain
| | - John Stephens
- Plymouth Marine Laboratory, Prospect Place, Plymouth PL1 3DH, UK
| | - Carolyn Harris
- Plymouth Marine Laboratory, Prospect Place, Plymouth PL1 3DH, UK
| | - Rob Thomas
- British Oceanographic Data Centre, Joseph Proudman Building, 6 Brownlow Street, Liverpool L3 5DA, UK
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12
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Laverock B, Kitidis V, Tait K, Gilbert JA, Osborn AM, Widdicombe S. Bioturbation determines the response of benthic ammonia-oxidizing microorganisms to ocean acidification. Philos Trans R Soc Lond B Biol Sci 2013; 368:20120441. [PMID: 23980243 PMCID: PMC3758174 DOI: 10.1098/rstb.2012.0441] [Citation(s) in RCA: 38] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022] Open
Abstract
Ocean acidification (OA), caused by the dissolution of increasing concentrations of atmospheric carbon dioxide (CO2) in seawater, is projected to cause significant changes to marine ecology and biogeochemistry. Potential impacts on the microbially driven cycling of nitrogen are of particular concern. Specifically, under seawater pH levels approximating future OA scenarios, rates of ammonia oxidation (the rate-limiting first step of the nitrification pathway) have been shown to dramatically decrease in seawater, but not in underlying sediments. However, no prior study has considered the interactive effects of microbial ammonia oxidation and macrofaunal bioturbation activity, which can enhance nitrogen transformation rates. Using experimental mesocosms, we investigated the responses to OA of ammonia oxidizing microorganisms inhabiting surface sediments and sediments within burrow walls of the mud shrimp Upogebia deltaura. Seawater was acidified to one of four target pH values (pHT 7.90, 7.70, 7.35 and 6.80) in comparison with a control (pHT 8.10). At pHT 8.10, ammonia oxidation rates in burrow wall sediments were, on average, fivefold greater than in surface sediments. However, at all acidified pH values (pH ≤ 7.90), ammonia oxidation rates in burrow sediments were significantly inhibited (by 79-97%; p < 0.01), whereas rates in surface sediments were unaffected. Both bacterial and archaeal abundances increased significantly as pHT declined; by contrast, relative abundances of bacterial and archaeal ammonia oxidation (amoA) genes did not vary. This research suggests that OA could cause substantial reductions in total benthic ammonia oxidation rates in coastal bioturbated sediments, leading to corresponding changes in coupled nitrogen cycling between the benthic and pelagic realms.
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Affiliation(s)
- B Laverock
- Plymouth Marine Laboratory, Prospect Place, Plymouth PL1 3DH, UK.
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