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Zhu SI, McCullough MH, Pujic Z, Sibberas J, Sun B, Darveniza T, Bucknall B, Avitan L, Goodhill GJ. fmr1 Mutation Alters the Early Development of Sensory Coding and Hunting and Social Behaviors in Larval Zebrafish. J Neurosci 2023;43:1211-1224. [PMID: 36596699 PMCID: PMC9962781 DOI: 10.1523/jneurosci.1721-22.2022] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/29/2022] [Revised: 12/16/2022] [Accepted: 12/20/2022] [Indexed: 01/05/2023]  Open
2
Barthelson K, Baer L, Dong Y, Hand M, Pujic Z, Newman M, Goodhill GJ, Richards RI, Pederson SM, Lardelli M. Zebrafish Chromosome 14 Gene Differential Expression in the fmr1 h u2787 Model of Fragile X Syndrome. Front Genet 2021;12:625466. [PMID: 34135935 PMCID: PMC8203322 DOI: 10.3389/fgene.2021.625466] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/03/2020] [Accepted: 04/14/2021] [Indexed: 11/13/2022]  Open
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Avitan L, Pujic Z, Mölter J, Zhu S, Sun B, Goodhill GJ. Spontaneous and evoked activity patterns diverge over development. eLife 2021;10:e61942. [PMID: 33871351 PMCID: PMC8075578 DOI: 10.7554/elife.61942] [Citation(s) in RCA: 15] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/10/2020] [Accepted: 04/07/2021] [Indexed: 11/21/2022]  Open
4
Triplett MA, Pujic Z, Sun B, Avitan L, Goodhill GJ. Model-based decoupling of evoked and spontaneous neural activity in calcium imaging data. PLoS Comput Biol 2020;16:e1008330. [PMID: 33253161 PMCID: PMC7728401 DOI: 10.1371/journal.pcbi.1008330] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/30/2020] [Revised: 12/10/2020] [Accepted: 09/10/2020] [Indexed: 11/19/2022]  Open
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Avitan L, Pujic Z, Mölter J, McCullough M, Zhu S, Sun B, Myhre AE, Goodhill GJ. Behavioral Signatures of a Developing Neural Code. Curr Biol 2020;30:3352-3363.e5. [DOI: 10.1016/j.cub.2020.06.040] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/25/2019] [Revised: 04/13/2020] [Accepted: 06/11/2020] [Indexed: 10/23/2022]
6
Bicknell BA, Pujic Z, Feldner J, Vetter I, Goodhill GJ. Chemotactic responses of growing neurites to precisely controlled gradients of nerve growth factor. Sci Data 2018;5:180183. [PMID: 30179228 PMCID: PMC6122170 DOI: 10.1038/sdata.2018.183] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/15/2018] [Accepted: 07/17/2018] [Indexed: 12/21/2022]  Open
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Nguyen H, Dayan P, Pujic Z, Cooper-White J, Goodhill GJ. Retraction: A mathematical model explains saturating axon guidance responses to molecular gradients. eLife 2018;7:37048. [PMID: 29642996 PMCID: PMC5898414 DOI: 10.7554/elife.37048] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]  Open
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Avitan L, Pujic Z, Mölter J, Van De Poll M, Sun B, Teng H, Amor R, Scott EK, Goodhill GJ. Spontaneous Activity in the Zebrafish Tectum Reorganizes over Development and Is Influenced by Visual Experience. Curr Biol 2017;27:2407-2419.e4. [PMID: 28781054 DOI: 10.1016/j.cub.2017.06.056] [Citation(s) in RCA: 47] [Impact Index Per Article: 6.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/29/2016] [Revised: 05/18/2017] [Accepted: 06/20/2017] [Indexed: 10/19/2022]
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Nguyen H, Dayan P, Pujic Z, Cooper-White J, Goodhill GJ. A mathematical model explains saturating axon guidance responses to molecular gradients. eLife 2016;5:e12248. [PMID: 26830461 PMCID: PMC4755759 DOI: 10.7554/elife.12248] [Citation(s) in RCA: 80] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/12/2015] [Accepted: 12/18/2015] [Indexed: 11/13/2022]  Open
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Pujic Z, Nguyen H, Glass N, Cooper-White J, Goodhill GJ. Axon Guidance Studies Using a Microfluidics-Based Chemotropic Gradient Generator. Methods Mol Biol 2016;1407:273-285. [PMID: 27271909 DOI: 10.1007/978-1-4939-3480-5_20] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/06/2023]
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Goodhill GJ, Faville RA, Sutherland DJ, Bicknell BA, Thompson AW, Pujic Z, Sun B, Kita EM, Scott EK. The dynamics of growth cone morphology. BMC Biol 2015;13:10. [PMID: 25729914 PMCID: PMC4353455 DOI: 10.1186/s12915-015-0115-7] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/20/2014] [Accepted: 01/09/2015] [Indexed: 02/05/2023]  Open
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Thompson AW, Pujic Z, Richards LJ, Goodhill GJ. Cyclic nucleotide-dependent switching of mammalian axon guidance depends on gradient steepness. Mol Cell Neurosci 2011;47:45-52. [PMID: 21376124 DOI: 10.1016/j.mcn.2011.02.012] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/26/2010] [Revised: 01/28/2011] [Accepted: 02/22/2011] [Indexed: 01/25/2023]  Open
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Vetter I, Pujic Z, Goodhill GJ. The response of dorsal root ganglion axons to nerve growth factor gradients depends on spinal level. J Neurotrauma 2010;27:1379-86. [PMID: 20504159 DOI: 10.1089/neu.2010.1279] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/11/2023]  Open
14
Pujic Z, Mortimer D, Feldner J, Goodhill GJ. Assays for eukaryotic cell chemotaxis. Comb Chem High Throughput Screen 2009;12:580-8. [PMID: 19601755 DOI: 10.2174/138620709788681952] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
15
Pujic Z, Giacomantonio CE, Unni D, Rosoff WJ, Goodhill GJ. Analysis of the growth cone turning assay for studying axon guidance. J Neurosci Methods 2008;170:220-8. [DOI: 10.1016/j.jneumeth.2008.01.014] [Citation(s) in RCA: 33] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/31/2007] [Revised: 01/16/2008] [Accepted: 01/16/2008] [Indexed: 10/22/2022]
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Mortimer D, Fothergill T, Pujic Z, Richards LJ, Goodhill GJ. Growth cone chemotaxis. Trends Neurosci 2008;31:90-8. [DOI: 10.1016/j.tins.2007.11.008] [Citation(s) in RCA: 141] [Impact Index Per Article: 8.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/25/2007] [Revised: 11/29/2007] [Accepted: 11/29/2007] [Indexed: 12/16/2022]
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Sánchez-Lavega A, Orton GS, Hueso R, García-Melendo E, Pérez-Hoyos S, Simon-Miller A, Rojas JF, Gómez JM, Yanamandra-Fisher P, Fletcher L, Joels J, Kemerer J, Hora J, Karkoschka E, de Pater I, Wong MH, Marcus PS, Pinilla-Alonso N, Carvalho F, Go C, Parker D, Salway M, Valimberti M, Wesley A, Pujic Z. Erratum: Depth of a strong jovian jet from a planetary-scale disturbance driven by storms. Nature 2008. [DOI: 10.1038/nature06807] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
18
Pujic Z, Omori Y, Tsujikawa M, Thisse B, Thisse C, Malicki J. Reverse genetic analysis of neurogenesis in the zebrafish retina. Dev Biol 2006;293:330-47. [PMID: 16603149 DOI: 10.1016/j.ydbio.2005.12.056] [Citation(s) in RCA: 37] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/16/2005] [Revised: 12/08/2005] [Accepted: 12/12/2005] [Indexed: 11/23/2022]
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Pujic Z, Malicki J. Retinal pattern and the genetic basis of its formation in zebrafish. Semin Cell Dev Biol 2004;15:105-14. [PMID: 15036213 DOI: 10.1016/j.semcdb.2003.09.008] [Citation(s) in RCA: 35] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/31/2023]
20
Malicki J, Jo H, Pujic Z. Zebrafish N-cadherin, encoded by the glass onion locus, plays an essential role in retinal patterning. Dev Biol 2003;259:95-108. [PMID: 12812791 DOI: 10.1016/s0012-1606(03)00181-7] [Citation(s) in RCA: 104] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
21
Malicki J, Jo H, Wei X, Hsiung M, Pujic Z. Analysis of gene function in the zebrafish retina. Methods 2002;28:427-38. [PMID: 12507461 DOI: 10.1016/s1046-2023(02)00262-1] [Citation(s) in RCA: 34] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]  Open
22
Malicki JJ, Pujic Z, Thisse C, Thisse B, Wei X. Forward and reverse genetic approaches to the analysis of eye development in zebrafish. Vision Res 2002;42:527-33. [PMID: 11853769 DOI: 10.1016/s0042-6989(01)00262-0] [Citation(s) in RCA: 27] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/08/2023]
23
Pujic Z, Malicki J. Mutation of the zebrafish glass onion locus causes early cell-nonautonomous loss of neuroepithelial integrity followed by severe neuronal patterning defects in the retina. Dev Biol 2001;234:454-69. [PMID: 11397013 DOI: 10.1006/dbio.2001.0251] [Citation(s) in RCA: 65] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
24
Worapamorn W, Li H, Haas HR, Pujic Z, Girjes AA, Bartold PM. Cell surface proteoglycan expression by human periodontal cells. Connect Tissue Res 2000;41:57-68. [PMID: 10826709 DOI: 10.3109/03008200009005642] [Citation(s) in RCA: 25] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 02/03/2023]
25
Worapamorn W, Li H, Pujic Z, Xiao Y, Young WG, Bartold PM. Expression and distribution of cell-surface proteoglycans in the normal Lewis rat molar periodontium. J Periodontal Res 2000;35:214-24. [PMID: 10983882 DOI: 10.1034/j.1600-0765.2000.035004214.x] [Citation(s) in RCA: 17] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
26
Li H, Pujic Z, Xiao Y, Bartold PM. Identification of Bone Morphogenetic Proteins 2 and 4 in Commercial Demineralized Freeze-dried Bone Allograft Preparations: Pilot Study. Clin Implant Dent Relat Res 2000;2:110-7. [PMID: 11359264 DOI: 10.1111/j.1708-8208.2000.tb00113.x] [Citation(s) in RCA: 34] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
27
Goodenough S, Davidson M, Chen W, Beckmann A, Pujic Z, Otsuki M, Matsumoto I, Wilce P. Immediate early gene expression and delayed cell death in limbic areas of the rat brain after kainic acid treatment and recovery in the cold. Exp Neurol 1997;145:451-61. [PMID: 9217081 DOI: 10.1006/exnr.1997.6471] [Citation(s) in RCA: 25] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/04/2023]
28
Zhao ZZ, Savage NW, Pujic Z, Walsh LJ. Immunohistochemical localization of mast cells and mast cell-nerve interactions in oral lichen planus. Oral Dis 1997;3:71-6. [PMID: 9467345 DOI: 10.1111/j.1601-0825.1997.tb00015.x] [Citation(s) in RCA: 33] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
29
Pujic Z, Matsumoto I, Yamataka A, Miyano T, Wilce P. Induction of immediate-early, ornithine decarboxylase and antizyme gene expression in the rat small intestine after transient ischaemia. Life Sci 1996;58:2289-96. [PMID: 8649218 DOI: 10.1016/0024-3205(96)00229-9] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/01/2023]
30
Pujic Z, Matsumoto I, Wilce PA. Expression of the genes coding for ornithine decarboxylase and its regulatory protein antizyme in the developing rat brain. Dev Neurosci 1995;17:286-91. [PMID: 8829917 DOI: 10.1159/000111298] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/02/2023]  Open
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Goto S, Matsumoto I, Kamada N, Bui A, Saito T, Findlay M, Pujic Z, Wilce P. The induction of immediate early genes in postischemic and transplanted livers in rats. Its relation to organ survival. Transplantation 1994;58:840-5. [PMID: 7940719] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/28/2023]
32
Pujic Z, Matsumoto I, Wilce PA. Expression of the gene coding for the NR1 subunit of the NMDA receptor during rat brain development. Neurosci Lett 1993;162:67-70. [PMID: 7510056 DOI: 10.1016/0304-3940(93)90561-x] [Citation(s) in RCA: 24] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/25/2023]
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