Prevalence of antibiotics, antibiotic resistance genes, and their associations in municipal wastewater treatment plants along the Yangtze River basin, China

The overuse and misuse of antibiotics have resulted in the pollution of antibiotics and antibiotic resistance genes (ARGs) in municipal wastewater treatment plants (WWTPs), posing threats to ecological security and human health. Thus, a comprehensive investigation was conducted to assess the occurrence, removal efficiency, and ecological risk of antibiotics, along with the diversity, abundance, and co-occurrence of ARGs, and their correlations in 13 WWTPs along the Yangtze River Basin. Among 35 target antibiotics, 23 antibiotics within 6 categories were detected in all the samples. Amoxicillin (AMO), ofloxacin (OFL), and pefloxacin (PEF) were predominant in influents, while AMO exhibited dominance with the highest concentration of 1409 ng/L in effluents. Although antibiotic removal performance varied among different WWTPs, a significant decrease in each antibiotic category and overall antibiotics was observed in effluents compared with that in influents (p < 0.05). Remarkably, ecological risk assessment revealed high risks associated with AMO and ciprofloxacin (CIP) and medium risks linked to several antibiotics, notably including OFL, roxithromycin (ROX), clarithromycin (CLA), and tetracycline (TC). Furthermore, 96 ARG subtypes within 12 resistance types were detected in this study, and the total absolute abundance and diversity of ARGs were significantly decreased from influents to effluents (p < 0.05). Enrichment of 38 ARGs (e.g., blaNDM, ermA, vatA, mexA, and dfrA25) in effluents indicated potential health risks. Various mobile genetic elements (MGEs), exhibited significant correlations with a majority of ARGs in both influents and effluents, such as intⅠ1, tnpA1, tnpA5, and tp614, underscoring the important role of MGEs in contributing to the ARG dissemination. Many antibiotics displayed lower correlations with corresponding ARGs, but exhibited higher correlations with other ARGs, suggesting complex selective pressures influencing ARG propagation. Overall, the incomplete elimination of antibiotics and ARGs in WWTPs is likely to pose adverse impacts on aquatic ecosystems in the Yangtze River Basin.

Effects of microplastics on the structure and function of bacterial communities in sediments of a freshwater lake

As an emerging pollutant, microplastics (MPs) cause widespread concern around the world owing to the serious threat they pose to ecosystems. In particular, sediments are thought to be the long-term sink for the continual accumulation of MPs in freshwater ecosystems. Polyethylene (PE) and polyethylene terephthalate (PET) have been frequently detected with large concentration variations in freshwater sediments from the lower reaches of the Yangtze River, one of the most economically developed regions in China, characterized by accelerated urbanization and industrialization, high population density and high plastics consumption. However, the impact of PE and PET on the sedimental bacterial community composition and its function has not been well reported for this specific region. Herein, PE and PET particles were added to freshwater sediments to assess the effects of different MP types on the bacterial community and its function, using three concentrations (500, 1500 and 2500 items/kg) per MP and incubations of 35, 105 and 175 days, respectively. This study identified a total of 68 phyla, 211 classes, 518 orders, 853 families and 1745 genera. Specifically, Proteobacteria, Chloroflexi, Acidobacteriota, Actinobacteriota and Firmicutes were the top five phyla. A higher bacterial diversity was obtained in control sediments than in the MP-treated sediments. The presence of MPs, whether PET or PE, had significant impact on the bacterial diversity, community structure and community composition. PICRUSt2 and FAPOTAX predictions demonstrated that MPs could potentially affect the metabolic pathways and ecologically functional groups of bacteria in the sediment. Besides the MP-related factors, such as the type, concentration and incubation time, the physicochemical parameters had an effect on the structure and function of the bacterial community in the freshwater sediment. Taken together, this study provides useful information for further understanding how MPs affect bacterial communities in the freshwater sediment of the lower reaches of the Yangtze River, China.

Spatiotemporal variation, fluxes and risk evaluation of neonicotinoid insecticides within the midsection of Yangtze River, China: An exploration as ecological protection threshold

Neonicotinoid insecticides (NNIs) have attracted global concern due to its extensive use in agricultural activities and their potential risks to the animal and human health, however, there is limited knowledge on the regional traits and ecological risks of NNIs in the aquatic environments. We herein investigated the occurrence of NNIs within the midsection of Yangtze River in China, offering the inaugural comprehensive report on NNIs within this region. In this study, eleven NNIs were analyzed in 108 river water and sediment samples from three seasons (normal, dry and wet season). We detected a minimum of seven NNIs in the water and four NNIs in the sediment, with total concentrations ranging from 12.33 to 100.5 ng/L in water and 0.08-5.68 ng/g in sediment. The levels of NNIs in both river water and sediment were primarily influenced by the extent of agricultural activities. The estimated annual load of NNIs within the midsection of Yangtze River totaled 40.27 tons, April was a critical contamination period. Relative potency factor (RPF) analysis of the human exposure risk revealed that infants faced the greatest exposure risk, with an estimated daily intake of 11.27 ng kg-1∙bw∙d-1. We established the acute and chronic thresholds for aquatic organisms by employing the Species Sensitive Distribution (SSD) method (acute: 384.1 ng/L; chronic: 168.9 ng/L). Based on the findings from this study, 33% of the river water samples exceeded the chronic ecological risks thresholds, indicating the urgent need for intervention programs to guarantee the safety of the river for aquatic life in the Yangtze River Basin.

Multifunctionality promotes the prosperity of riverine planktonic diatoms in plateau

Interpreting the biogeographic distribution and underlying mechanisms of functional traits not only contributes to revealing the spatiotemporal dynamics of species biodiversity but also helps to maintain ecological stability during environmental variations. However, little is known about the functional profiles of diatom communities over large river systems. Herein, we provided the first blueprints about the spatiotemporal distributions and driving forces of functional traits for both planktonic and sedimentary diatoms over the 6030 km continuum of the Yangtze River, with the help of the high-throughput sequencing and functional identification. By investigating the 28 functional traits affiliated into five categories, we found that planktonic diatom functions showed clearer landform-heterogeneity patterns (ANOSIM R = 0.336) than sedimentary functions (ANOSIM R = 0.172) along the river, represented by life-forms and ecological-guilds prominent in water-plateau as well as cell-sizes and life-forms particularly in sediment-plateau. Planktonic diatom functions also displayed higher richness and network complexity in plateau (richness: 58.70 ± 9.30, network edges: 65) than in non-plateau regions (23.82 ± 13.16, 16), promoting the stability and robustness of diatom functions against the high-radiation and low-temperature plateau environment. Environmental selection (mainly exerted by PAR, UV, and Tw) played crucial roles in determining the functional variations of planktonic diatoms (explaining 80.5%) rather than sedimentary diatoms (14.5%) between plateau and non-plateau regions. Meanwhile, planktonic diatom traits within life-forms were identified to be well responsive to the ecological environment quality (r = 0.56-0.60, P < 0.001) in the Yangtze. This study provided comprehensive insights into the multifunctionality of diatoms and their responses to environmental disturbance and environment quality, which helps to develop effective strategies for maintaining ecological stability in changing river environments.

The cumulative effects of cascade reservoirs control nitrogen and phosphorus flux: Base on biogeochemical processes

The reservoir serves as a water source, a flood control structure, a navigational aid, and also impacts the downstream ecosystem as well as the reservoir zone. However, debate exists about effectiveness of cascade reservoirs in controlling the transportation of nutrients, particularly in the Yangtze River basin, which has been significantly affected by reservoir development. This research develops a new model X-NPSEM (X with Nitrogen and Phosphorus Steady-state Reservoir Model) based on biogeochemical processes of nitrogen and phosphorus reaction for investigating the dynamic storage capacity of cascade reservoirs at both reservoir- and watershed scales. Then the cumulative effects of cascade reservoirs and the related mechanism were investigated in Fujiang watershed, China. Based on the results, cascade reservoirs retained 16.3 % of nitrogen fluxes and 37.6 % of phosphorus fluxes annually. Downstream reservoirs have higher retention rates of phosphorus (0.48/d) compared to upstream reservoirs (0.10/d), mainly due to inflow sediment. Nitrogen retention rates show seasonal variations: wet season (0.21/d) and dry season (0.17/d). These fluctuations in nitrogen retention are primarily influenced by changes in temperature rather than other factors such as operation period, nitrogen and phosphorus concentration, or the nitrogen/phosphorus ratio. In upstream, the concentration of sediment entering the reservoir plays a decisive role in the transformation of P retention from sink to source. The X-NPSRM coupler model could be used for global reservoir operation and watershed management.

Elemental geochemical evidence for the river-derived sources of trace metals in surface sediments from Hangzhou Bay, East China Sea

Coastal estuaries are often heavily subject to riverine influences by the inputs of sediment from terrestrial sources. Hangzhou Bay (HZB) is threatened by the riverine derived trace metals from two large rivers of Qiantang River (QTR) and Yangtze River (YZR). However, previous studies mainly focused on the incidental transport from the largest river in China (YZR) and failed to simultaneously evaluate the contributions of these two rivers, especially the directly flowing river of QTR, by their trace elemental geochemical composition and distribution. Herein, a comprehensive study identified the river-derived sources of multiple trace metals in surface sediments which transported from both of the rivers. The sampling stations were separated into three regions of YZR, HZB, and QTR based on their spatial distributions of sediment grain size and components. The significant variations for most of the trace metals concentrations, except for Cd, Th, and U, were found among three regions (χ2 ≥ 8.22, p ≤ 0.016). The highest concentrations in HZB were mainly resulted from the grain size effect (68.82% of the total variance), while the highest concentrations of Sr, Cd, and Ba in YZR and Zr and Hf in QTR were attributed to the anthropogenic source (11.90%) and mineral composition (6.21%) of river basins. After normalized the diversity of multiple trace metals concentrations and the influence of grain size by ratios of Igeo and EFLi, three regions were effectively distinguished. It was indicated that As, Cd, and Sb were enriched in the sediments of rivers by anthropogenic source (EFLi > 1.5 and/or Igeo > 1). The results evidenced that, after removing the influence of grain size, elemental geochemical composition of the surface sediments confidently identified the river-derived anthropogenic sources of the enriched trace metals from two major rivers, and largely from YZR.

Rare resistome rather than core resistome exhibited higher diversity and risk along the Yangtze River

As important freshwater ecosystems, the occurrence and distribution of antibiotic resistance genes (ARGs) in rivers are relevant to public health. However, studies investigating ARGs of different environmental media in river ecosystems are limited. In this study, we analyzed the ARGs of microbes in free-living setting, particle-associated setting, sediment and bank soil of the Yangtze River using metagenomics. Twenty-six ARGs were found in all samples regardless of media (core resistome) with a diversity of 8.6 %-34.7 %, accounting for 22.7 %-89.2 % of the relative abundance of the overall ARGs. The core resistome of the Yangtze River was dominated by multidrug resistance genes consisting mainly of efflux pumps and bacitracin resistance genes. The rare resistome was dominated by multidrug, sulfonamide, and aminoglycoside resistance genes. The core resistome was more prevalent in chromosomes, implying that these ARGs with low diversity and high relative abundance may be intrinsic to microbes in the Yangtze River. The rare resistome was more prevalent in plasmids, suggesting these ARGs with high diversity and low relative abundance were acquired under environmental stresses and had transfer potential. Additionally, we found that core and rare resistome were mainly carried by specific bacteria. Noteworthily, twenty-two ARGs of high clinical concern were identified in rare resistome, especially aac(6')-I, sul1, and tetM, which were plasmid-borne and hosted by clinically relevant pathogens. Both core and rare resistome hosts showed the highest niche breadths in particle-associated setting compared to other media, and particle-associated setting could provide more stable and ideal conditions for resistome hosts to survive. This study elucidated the genetic locations of ARGs and the community assembly mechanisms of ARG hosts in freshwater environments.

Environmental DNA unveiling the fish community structure and diversity features in the Yangtze River basin

Fish, as top predators in aquatic ecosystems, play an important role in maintaining the structure and functioning of these ecosystems, making their diversity a topic of great interest. This study focused on the Yangtze River Basin to investigate the fish community structure and diversity using environmental DNA (eDNA) technology. The results showed that a total of 71616 fish operational taxonomic units (OTUs) and 90 fish belonging to 23 families were detected, with the Cyprinidae family being the dominant group, followed by the Cobitidae, Amblycipitidae, etc. Compared to historical traditional morphological fish surveys, the quantity of fish detected using eDNA was relatively low, but the overall distribution pattern of fish communities was generally consistent. The highest fish Shannon-Wiener diversity index in the Yangtze River Basin sites reaches 2.60 with an average value of 1.25. The fish diversity index was higher in the downstream compared to the middle and upstream regions, and there were significant differences among different sampling sites. Significant environmental factors influencing α-diversity included chlorophyll-a, chemical oxygen demand, dissolved oxygen, total nitrogen, and elevation. Non-metric multidimensional scaling (NMDS) analysis revealed significant differences in fish community composition between the upstream and middle/lower reaches of the Yangtze River, while the composition of fish communities in the middle and lower reaches was more similar. Redundancy analysis (RDA) indicated that total organic carbon (TOC) was positively correlated with fish community distribution in the upstream, while water temperature and NO3-N were negatively correlated with fish distribution in the upstream. NH3-N and CODMn were negatively correlated with fish distribution in the middle and downstream regions, indicating a relatively severe water pollution in these areas. Additionally, fish communities in the Yangtze River displayed a typical distance decay pattern.

Organophosphate esters in rural wastewater along the Yangtze river Basin: Occurrence, removal efficiency and environmental implications

Organophosphate esters (OPEs) discharged from rural domestic wastewater were one of the important sources of OPEs in receiving water bodies, which has posed a potential threat to the ecological environment. However, very little information on the characteristics of OPEs in the rural domestic wastewater is available. Herein, the occurrence, removal efficiency and environmental implication of OPEs in rural domestic wastewater treatment facilities (RD-WWTFs) along the Yangtze River Basin were investigated. Results indicated that the median concentrations of ΣAlkyl-OPEs, ΣHalogenated-OPEs, ΣAryl-OPEs and the total OPE (ΣOPEs) in influents were 28.28, 99.25, 10.22 and 136.84 ng/L, while the median concentrations of them in effluents were 25.80, 141.86, 7.98 and 173.31 ng/L, respectively. Undoubtedly, halogenated OPEs were the most abundant in both influent and effluent, followed by alkyl and aryl OPEs, and they accounted for average proportions of 69.50%, 19.96%and 10.54% for influents, and 78.16%, 16.14%and 5.71% for effluents, respectively. Specifically, tris(2-chloroisopropyl) phosphate (TCPP, median: 55.17 ng/L in influents and 85.75 ng/L in effluents) was the dominant contributor to the ΣOPEs concentrations with average proportions of 37.75% and 47.33% for influents and effluents, respectively. Moreover, the concentration ranks for most OPEs except for aryl OPEs from high to low were upper reaches > lower reaches > middle reaches. However, negative values of tris(2-chloroethyl)phosphate (TCEP, -32.4%), TCPP (-55.4%) and tris(1,3-dichloroisopropyl) phosphate (TDCPP, -26.3%) were observed. The removal rates of alkyl OPEs (10-20%) and aryl OPEs (20-30%) were also not sufficient. Ecological risk values of ΣOPEs showed that there were 2.44% of high risk, 31.7% of moderate risk and 41.5% of low risk for effluents; while 0.00%, 48.8% and 46.3% were exhibited in high, moderate and low risk for influents, indicating that very slight reduction in risk was achieved by the RD-WWTFs.

Spatiotemporal response of dissolved organic matter diversity to natural and anthropogenic forces along the whole mainstream of the Yangtze River

The Yangtze River, the largest river in Asia, plays a crucial role in linking continental and oceanic ecosystems. However, the impact of natural and anthropogenic disturbances on composition and transformation of dissolved organic matter (DOM) during long-distance transport and seasonal cycle is not fully understood. By using a combination of elemental, isotopic and optical techniques, as well as Fourier-transform ion cyclotron resonance mass spectrometry (FT-ICR MS), we investigated DOM abundance and composition along the whole mainstream at highly spatial resolution in the dry and early wet seasons. Our findings showed that the concentration and flux of dissolved organic carbon (DOC) in the Yangtze River was much lower compared with other worldwide larger rivers. The distribution of δ¹³C_DOC and higher abundance of humic-like fluorescent component and highly unsaturated and phenolics (HUPs) compound reflected a prominent contribution of allochthonous DOM. Further optical and molecular analysis revealed humic-like fluorescent components were coupled with CHO molecules and HUPs compound with higher aromatic, unsaturated, molecular weight and stable characteristics between upstream and midstream reaches. With increasing agricultural and urban land downstream, there were more heteroatomic formulae and labile aliphatic and protein-like compounds which were derived from human activities and in situ primary production. Meanwhile, DOM gradually accumulates with slow water flow and additional autochthonous organics. Weaker solar radiation and water dilution during the dry/cold season favours highly aromatic, unsaturated and oxygenated DOM compositions. Conversely, higher discharge during the wet/warm season diluted the terrestrial DOM, but warm temperatures could promote phytoplankton growth that releases labile aliphatic and protein-like DOM. Besides, chemical sulfurization, hydrogenation and oxygenation were found during molecular cycling processes. Our research emphasizes the active response of riverine DOM to natural and anthropogenic controls, and provides a valuable preliminary background to better understand the biogeochemical cycling of DOM in a larger river.

Fipronil and its transformation products in the Yangtze River: Assessment for ecological risk and human exposure

Fipronil (FP), a phenylpyrazole insecticide, is widely used in agricultural, residential, and veterinary settings. It is toxic to ecosystems and humans; moreover, some of its transformation products are more toxic than FP. A comprehensive profile of the contamination of the Yangtze River by FP and its transformation products (FPs) is not yet available. This study aims to fill this data gap. A total of 144 water samples were collected from 72 sampling locations along the river during the wet (June 2021) and dry (December 2020) seasons. High detection rates (85.4-91.7%) of FPs were found, with ΣFPs' median concentration of 0.49 ng/L. The parent compound FP was the most abundant (median: 0.13 ng/L), followed by FP-desulfinyl (0.08), FP-sulfone (0.07), FP-detrifluoromethylsulfinyl (DTF, 0.07), FP-sulfide (0.06) and FP-amide (0.06). Their concentrations increased significantly from the upper to the lower reaches; for approximately every 100 km toward the lower reaches, the level of FPs increased by 13-15%. The urban region and wet season had the higher FPs contamination. Through water ingestion, the human exposure risk posed by FPs in the river was acceptable; however, the ecological risk assessment showed a moderate to high risk posed by FPs. Follow-up studies are warranted to establish integrated ecological risk assessment models and conduct epidemiological risk assessments among population groups with high exposure levels of FPs. Given the high ecological risk of FPs, regular monitoring of them in the Yangtze River is necessary. FP-DTF was reported in surface water for the first time.

Divergent linkages of soil phosphorus fractions to edaphic properties following afforestation in the riparian zone of the upper Yangtze river, China

Soil phosphorus (P) is an essential nutrient element for plant growth but it is also one of the elements of agricultural-dominated watershed pollution. While the vegetation in the riparian zone usually plays an important role in regulating P pollutants. However, how afforestation affects soil P dynamics and fractions in the riparian zone remains largely unclear. Here, we investigated soil P fractions, and associated drivers including edaphic properties, microbial attributes, and soil enzyme activities under conversion from cropland to different afforested lands in order to better understand the dynamics of soil P fractions in the riparian zone of the upper Yangtze River. We found that afforestation significantly decreased the concentrations of available phosphorus, microbial biomass P, and labile P fractions, but the moderately labile P and Stable P did not significantly differ among afforestation types. Particularly, the lowest concentration of labile P was observed in Morus alba (M.a.) forests followed by the Salix babylonica (S.b.) forests, whereas croplands generally exhibited an inverse trend with a higher labile P concentration compared to woodlands, especially in croplands nearby Morus alba forests. Generally, P fractions were negatively associated with soil pH and C:N ratio, while positively related to microbial attributes, N:P ratio, and alkaline phosphatase activities. The labile P and moderately labile P fractions were predominantly regulated by biotic factors (i.e., microbial biomass P, microbial biomass N, leucine amino peptidase), whereas the stable P was strongly related to abiotic factors (i.e., total C concentration, pH, C:N ratio). These findings indicate afforestation is conducive to intercept more labile P, resulting in reduced P leaching to rivers. Collectively, our results not only offer direct experimental insight into predicting the effects of afforestation on soil P fractions but also have important implications for agricultural pollution management and reforestation strategies in the riparian zone.

Dam construction reshapes sedimentary pollutant distribution along the Yangtze river by regulating sediment composition

Dam construction has far-reaching impacts on pollutant accumulation and the pollutant-induced quality of aquatic environments. Nonetheless, its large-scale effects on pollutant distribution in sediments, which greatly contribute to the environmental impacts of coexisting pollutants, remain poorly understood. We collected sediments from the Yangtze River during the dry and normal seasons (with 'normal' defined in terms of precipitation level), and examined how dam construction alters the spatial trajectories of both inorganic and organic pollutants in the sediments. Sediment composition exhibited linear variation from the upper to the lower reaches, with clay and silt particles dominating the sediment in the Three Gorges Reservoir and sand particles dominating in the middle-lower reaches. Accordingly, upstream of the Three Gorges Dam (TGD), sedimentary carbon, nitrogen, phosphorus, heavy metal, polycyclic aromatic hydrocarbons (PAHs), and oxygenated PAHs (OPAHs) contents increased toward the TGD owing to its regulation of the spatial variation in sediment particle size. The TGD caused upstream sedimentary accumulation of pollutants to be higher nearer to the TGD than in the upper reaches by 17%-129% for carbon, nitrogen, and phosphorus, 7%-51% for heavy metals, 30% for PAHs, and 140% for OPAHs. Pollutant content was sharply lower below the TGD, by 0.58-11.15 times for carbon, nitrogen, and phosphorus, 0.1-2.6 times for heavy metals, 1.7 times for PAHs, and 5.6 times for OPAHs. Upstream of the TGD, levels of NH₄⁺-N, the main form of N in the interstitial water of the Yangtze River, increased lineary toward the TGD, whereas those of NO₃^--N and NO₂^--N decreased. Sedimentary organic matter source contributions were consistent along the Yangtze River, being on an average 46% for C3 plants and 28% for soil organic substances, further confirming the dam's regulatory effect on pollutants. These findings provide a foundation for future assessments of the environmental impact of dam-induced river fragmentation and hydrological alterations, and for developing advanced watershed pollutant management strategies.

Genetic Diversity and Population Structure of Spirobolus bungii as Revealed by Mitochondrial DNA Sequences

Soil macrofauna, such as Spirobolus bungii, are an important component of ecosystems. However, systematic studies of the genetic diversity, population genetic structure, and the potential factors affecting the genetic differentiation of S. bungii are lacking. We performed a population genetic study of 166 individuals from the mountains to the south of the Yangtze River, north of the Yangtze River in Nanjing city, and near Tianjin city, in order to investigate the correlations between geographical distance and genetic diversity. A total of 1182 bp of COX2 and Cytb gene sequences of mitochondrial DNA, and 700 bp of the 18S rRNA gene sequence were analyzed. There were two haplotypes and one variable site in the 18S rRNA gene, and 28 haplotypes and 78 variable sites in the COX2 and Cytb genes. In this study, the 18S rRNA gene was used for species identification, and mtDNA (concatenated sequences with Cytb and COX2) was used for population genetic analysis. Structure cluster analysis indicated that the genetic structures of the different populations of S. bungii tended to be consistent at small geographical scales. Phylogenetic trees revealed that the haplotypes were clearly divided into three branches: the area south of the Yangtze River, the area to the north of the Yangtze River in Nanjing, and the area in Tianjin. Large geographical barriers and long geographical distance significantly blocked gene flow between populations of S. bungii. Our results provide a basic theoretical basis for subsequent studies of millipede taxonomy and population genetic evolution.

Microplastic pollution in the Yangtze River Basin: Heterogeneity of abundances and characteristics in different environments

Microplastic pollution in the Yangtze River Basin has become a major concern; however, the variations in different environmental compartments are unknown. Here, we compiled published information including detection methods, occurrence, and characterization of microplastics from 624 sampling sites in river water, river sediment, lake and reservoir water, and lake and reservoir sediment in the Yangtze River Basin. The spatial distribution of sampling sites shows fractal pattern and was uniformly concentrated around the main stream of the Yangtze River and the lake geographical zone. Collection, pretreatment, identification, and quantification processes varied among different studies. Non-parametric tests were performed to compare the different microplastic indices. A Pearson correlation analysis was used to study the relationship between microplastic pollution and local socioeconomic conditions. We found that the microplastic size and abundance distribution in river water and lake and reservoir water showed different patterns for different sampling methods, indicating that different methods influenced the results. Population density and urbanization rate are suggested to be important factors influencing the spatial heterogeneity of microplastic abundances in water, rather than in sediment. The microplastic abundances in lake and reservoir water were higher than that in river water in bulk samples. However, microplastic abundances among different sediment environments shows no significant difference. For bulk water samples and sediment samples overall, the proportion of small microplastics (<1 mm, i.e. SMP), fibers, transparent debris, and polypropylene (PP) were 65.1%, 67.8%, 31.8%, and 29.7%, respectively. The microplastic characteristics of lake and reservoir water and sediment were similar, differing from those of river water and sediment. This study provides the first basin scale insight into microplastic occurrence and characteristics in different environments in the Yangtze River Basin.

Occurrence of N-nitrosamines and their precursors in the middle and lower reaches of Yangtze River water

The presence of some types of N-nitrosamines in water bodies is of great concern worldwide due to their carcinogenic risks and harmful mutagenic effects on human health. In the present study, eight N-nitrosamines and their formation potentials (FPs) were primarily investigated in Yangtze River surface water to evaluate their spatial distribution, mass loads, and ecological risks. The results showed that of the eight N-nitrosamines investigated, NDMA (<1.5-17 ng/L), NDEA (<1.4-9.5 ng/L), NDPA (1.0 ng/L), NMOR (<1.0-1.3 ng/L), NPIP (<2.1-3.7 ng/L), and NDBA (<3.6-30 ng/L) were detected. The FPs of NDMA (<27-130 ng/L), NDEA (<0.9-2.3 ng/L), NDPA (<1.2-1.9 ng/L), NPYR (<1.4-2.9 ng/L), NMOR (<1.0 ng/L), and NDBA (<1.1-14 ng/L) were significantly identified. NDBA was predominantly observed in surface water, while NDMA was noticeably detected in chloraminated water samples. It was estimated that approximately 5.4 t/y of N-nitrosamines were carried by the Yangtze River to the East China Sea, whereas the input flux of N-nitrosamine precursors was estimated to be approximately 69.5 t/y. Spatial variations were observed due to the input of N-nitrosamines from the upstream dams and lakes. The origin of N-nitrosamine precursors was not associated with the presence of sediment in river water. NDEA could be introduced into river water by the discharge of wastewater. NDBA and its precursors could originate from industrial and aquaculture activities. NDMA and its precursors could result from both of the aforementioned sources. Moreover, the wastewater discharge from small cities, pH value, wastewater treatment ratio, and dilution could be the key factors that influence the occurrence of N-nitrosamines along the Yangtze River. More attention should be paid to the cancer risks posed by N-nitrosamines. The ecological risks posed by N-nitrosamines in the Yangtze River can be ignored.

Developing a statistical-weighted index of biotic integrity for large-river ecological evaluations

The efficiency, accuracy and universality of ecological assessment methods comprise an important foundation for comprehensive assessment and restoration of large river ecological health at the watershed scale. New evaluation metrics and methods are urgently needed to be developed to adapt the characteristics of large rivers, including geographical differences in surface runoff, regional ecological complexity, and seasonal changes. In this study, a bacteria-weighted index of biotic integrity was developed to assess the ecological health of large rivers (lrBW-IBI) based on compositional and functional characteristics of sediment bacterial communities from 33 sections of the lower mainstream of Yangtze River. Five key metrics were determined by range, responsiveness, and redundancy tests. Principal component analysis (PCA), entropy method, criteria importance through intercriteria correlation and random forest were applied to calculate weighted coefficients of key metrics. The optimal lrBW-IBI was observed through the sum of PCA weighted-metrics: the relative abundance of Latescibacteria (0.234), Gemmatimonadaceae (0.149), Nitrospira spp. (0.234), Rhizobiales (0.228), and nitrogenase NifH (0.156). According to PCA based lrBW-IBI, 12.12%, 24.24%, 39.39%, and 24.24% of river sections were labeled excellent, good, moderate, and relatively poor, respectively. The ecological status of the lower mainstream of the Yangtze River did not change significantly across seasons but declined gradually from upstream to downstream. This study provides a new assessment tool for the ecological health of large rivers and highlights the importance of microbial ecological index in river ecology.

Relative contribution of environmental and nutritional variables to net primary production of Cynodon dactylon (Linn.) Pers in the riparian zone of a Three Gorges tributary

Our knowledge of fundamental drivers of terrestrial net primary production (NPP) is crucial for improving the predictability of ecosystem stability under global climate change. However, the patterns and determinants of NPP are not fully understood, especially in the riparian zone ecosystem disturbed by periodic drought-rewetting (DRW) cycles. The environmental (flooding time, pH, moisture, and clay content) and nutritional properties (soil organic carbon, total nitrogen, total phosphorus, ammonium (NH4 +-N), nitrate (NO3 --N), and C:N:P stoichiometry) were investigated in the riparian zone of Pengxi River-a typical tributary of Three Gorges Reservoir (TGR). Structure equation modeling was performed to evaluate the relative importance of environmental and nutritional properties on NPP of Cynodon dactylon (Linn.) Pers (C. dactylon)-a dominating plant in the riparian zone of TGR. Our results indicated that NPP was much lower under much severe flooding stress. All of these variables could predict 46% of the NPP variance. Nutrient use efficiency (NUE) was one of the most critical predictor shaping the change of NPP. Specifically, flooding stress as a major driver had a direct positive effect on soil moisture and soil clay content. The soil clay content positively affects the soil C: N ratio, which further had an indirect negative impact on NPP by mediating NUE. Overall, our study provided a comprehensive analysis of the effects of the combined effect of environmental and nutrient factors on NPP and showed that continuous DRW cycles induced by hydrological regime stimulate the decrease of NPP of C. dactylon by changing NUE strategies. Further research is needed to explore the responses of NPP and NUE under different land use to DRW cycles and to investigate the DRW effects on the combined effect of environmental and nutrient factors by in situ experiments and long-term studies.

Spatial variation of fipronil and its derivatives in tap water and ground water from China and the fate of them during drinking water treatment in Wuhan, central China

Fipronil (FP) is an emerging insecticide, however, its occurrence in drinking water and source water is limited. In this work, a total of 789 tap water and 95 ground water samples were collected from China in June 2019 in order to assess occurrence of FP and its derivatives (FPs). FPs were also analyzed in source, treated (n = 10, July), and tap water samples (n = 81, July and October 2019) originating from the central Yangtze River and its tributary, the Hanshui River in Wuhan. The sum concentrations of FPs (ΣFPs) in the tap water in China ranged from not detected (ND) to 5.07 (median: 0.03 ng/L), with FP found in 55.3% of the samples, and other targets ≤ 50.0%. Significant regional variations in the ΣFPs values were found between East China (75th percentile: 0.31 ng/L) and Northwest China (0.04), as well as between East China and North China (0.04). Similar ΣFPs values were found for ground water and tap water. The estimated daily intake of ΣFPs via water ingestion was below 200 pg/kg-bw/day for all age groups and was lower than the reference dose for FP (0.2 μg/kg-bw/day). Additionally, FPs were found in all of the source water samples collected in Wuhan with concentrations in the range of 0.84-2.72 ng/L for ΣFPs (median: 2.39). Most of these FPs were removed during water treatment. Higher concentration of ΣFPs in tap water was observed in July (median: 0.04 ng/L) compared to that in October (ND). This is the first study on the occurrence of FPs in the Yangtze River, the fate of FPs during the tap water treatment, and the regional distribution of FPs in tap water from China.

Long-term (1980-2015) changes in net anthropogenic phosphorus inputs and riverine phosphorus export in the Yangtze River basin

Quantitative information on long-term net anthropogenic phosphorus inputs (NAPI) and its relationship with riverine phosphorus (P) export are critical for developing sustainable and efficient watershed P management strategies. This is the first study to address long-term (1980-2015) NAPI and riverine P flux dynamics for the Yangtze River basin (YRB), the largest watershed in China. Over the 36-year study period, estimated NAPI to the YRB progressively increased by ∼1.4 times, with NAPI_A (chemical fertilizer input + atmospheric deposition + seed input) and NAPI_B (net food/feed imports + non-food input) contributing 65% and 35%, respectively. Higher population, livestock density and agricultural land area were the main drivers of increasing NAPI. Riverine total phosphorus (TP), particulate phosphorus (PP) and suspended sediment (SS) export at Datong hydrological station (downstream station) decreased by 52%, 75% and 75% during 1980-2015, respectively. In contrast, dissolved phosphorus (DP) showed an increase in both concentration (∼7-fold) and its contribution to TP flux (∼16-fold). Different trends in riverine P forms were mainly due to increasing dam/reservoir construction and changes in vegetation/land use and NAPI components. Multiple regression models incorporating NAPI_A, NAPI_B, dam/reservoir storage capacity and water discharge explained 84% and 92% of the temporal variability in riverine DP and PP fluxes, respectively. Riverine TP flux estimated as the sum of DP and PP fluxes showed high agreement with measured values (R² = 0.87, NSE = 0.84), indicating strong efficacy for the developed models. The model forecasted an increase of 50% and 7% and a decrease of 15% and 22% in riverine DP flux from 2015 to 2045 under developing, dam building, NAPI_A and NAPI_B reduction scenarios, respectively. This study highlights the importance of including enhanced P transformation from particulate to bioavailable forms due to river regulation and changes in land-use, input sources and legacy P pools in development of P pollution control strategies.

A probabilistic modeling framework for assessing the impacts of large reservoirs on river thermal regimes - A case of the Yangtze River

Hydrological and thermal river regimes have changed greatly due to the construction of reservoirs and dams. Water temperature changes have important significance for aquatic habitats and freshwater ecosystems. To investigate the impact of large reservoirs on the water temperature regime along the middle reach of the Yangtze River, we present a probabilistic modeling framework to ascertain the joint dependence structures of air-water temperature and discharge-water temperature between pre-reservoir and post-reservoir periods based on the copula theory. The results show that the principle of maximum entropy (POME) method can better estimate the marginal distributions of temperature regimes. Reservoir operation disturbed the dependence structures of air-water temperature, especially after the Three Gorges Reservoir (TGR) was put into operation. Different shifts in the occurrence probabilities of high or low water temperatures at the downstream and upstream stations under extreme air temperature and discharge are observed, indicating the great effects of reservoirs on the dependence structures of the downstream river flow and thermal regime. Relying on the developed model, we propose the appropriate ranges of air temperature and discharge to maintain a suitable water temperature for Chinese sturgeon (Acipenser sinensis) spawning activity. The results of this study demonstrate the influence of dams on the thermal regime and can be helpful for optimizing reservoir operations to enhance biological conservation in the Yangtze River.

Occurrence of antibiotics and antibiotic resistance genes and their correlations in lower Yangtze River, China

The overuse and misuse of antibiotics could promote the emergence of antibiotic resistance genes (ARGs) and pose a potential risk to human health and the ecological environment. In this study, fifteen antibiotics and their corresponding ARGs in water, sediment and sewage treatment plant (STP) effluent were analysed to investigate their occurrence and correlation in the Yangtze River (Jiangsu section) for the first time. The concentrations of erythromycin-H₂O (EM-H₂O) (2.08-30 ng L^-1) and ofloxacin (OFL) (290-8400 ng kg^-1) were the highest in the water and sediment, respectively, and EM-H₂O and clarithromycin (CLA) posed the highest risks to aquatic organisms. The concentrations of antibiotics in STP effluent were significantly higher (p < 0.05) than those in the water. Norfloxacin (NOR) was the most predominant antibiotic, with low removal efficiency (-38%-51%), in STPs; the concentration of NOR in the STP effluent was 4-6 orders of magnitude higher than that in the water. Moreover, the concentrations of antibiotics and their corresponding ARG abundance in downstream were higher than those in upstream, suggesting that STPs with high concentration levels might be an important source of river contamination. Additionally, the concentrations of antibiotics and the abundance of ARGs might increase after the sewage treatment process. The results also showed the prevalence of sul1 and sul2 in all the sampling sites. Significant correlations (p < 0.0001) were detected between int1 and sul1 and sul2, which resulted from the contribution of int1 to the propagation of ARGs. Overall, this study demonstrated the prevalence of antibiotics and ARGs and their inconsistent correlations in the Yangtze River (Jiangsu section) and provides support for further investigation of the occurrence and spread of antibiotics and ARGs.

Human activities determine quantity and composition of dissolved organic matter in lakes along the Yangtze River

Dissolved organic matter (DOM) plays important roles in the aquatic biogeochemical cycle and the global carbon cycle. However, it is highly spatially and temporally varied due to complex sources from the catchment (allochthonous) and from within the system (autochthonous). Satellite remote sensing provides the ability to monitor DOM and identify the spatio-temporal variations in lakes on a global or regional scale. In this study, field work was conducted in 55 lakes in August 2012 along the middle and lower reaches of the Yangtze River (MLR-YR), where most lakes were characterized by eutrophication due to intense human activities. The results showed that both colored DOM (CDOM) and total DOM differed significantly by and were linearly related to the human-induced trophic state index (TSI), with R² = 0.41 and 0.61, respectively. Autochthonous substances by phytoplankton contributed to 38.5% of CDOM and 35.2% of DOM, and allochthonous terrestrial substance indexed by land cover change and aquaculture contributed to almost half, with 49.7% of CDOM and 49.8% of DOM. In total, human activities explained as much as 81.7% and 87.5% of the variations in CDOM and DOM, respectively. Finally, a flowchart for estimating DOM from satellite-derived TSI was proposed. This study has great significance for synchronously monitoring and managing aquatic environment quality in regional eutrophic lakes around the world.

Quantifying the change in streamflow complexity in the Yangtze River

Hydrological processes of the Yangtze River have changed over the past decades due to environmental change and human activity. This paper uses sample entropy to investigate the spatial distribution and dynamic change in streamflow series complexity in the Yangtze River, China. In this study, the complexity of the streamflow series is quantified by entropy analysis. Daily streamflow series for four stations located in the mainstem and two control stations of the two largest freshwater lakes were analysed for the past 60 years. The results showed that the complexity of the streamflow series showed an obvious spatial difference and an increasing trend from upstream to downstream in the Yangtze River. There was a negative relationship between the annual streamflow and the corresponding sample entropy, and their peak-to-valley values showed well-corresponding relationships. The complexity of the runoff series at the Cuntan, Yichang, and Datong stations showed a continuous increasing trend, while that of the Hankou station showed a decreasing trend. The Three Gorges Dam changed the streamflow series complexity in the middle reach of the Yangtze River during the initial impoundment stage, while it had only slight impacts during the fully operational stage. Compared to the mainstem reaches, the streamflow series complexity of the two lakes showed no obvious change. The complexity of the streamflow series in the mainstem of the Yangtze River has been influenced by dam construction. The study could provide a scientific reference for understanding the flow dynamic evolution in the Yangtze River.

Risk assessment of organochlorine pesticides in drinking water source of the Yangtze River

Organochlorine pesticides have been banned for many years, but the residual trace amount of organochlorine in water may still pose ecotoxicological risk. Meanwhile, the potential risk of organochlorine pesticides released from sediments, especially into drinking water sources, is receiving increasing attention. The present study assessed the pollution and potential risk of drinking water sources along the midstream and downstream Yangtze River. Residues of organochlorine pesticides (OCPs) in water, suspended particle matter (SPM), and sediment were evaluated with isotope dilution HRGC/HRMS. The results indicated that OCPs in water, SPM, and sediment ranged in 0.52-92.97 ng/L, 0.10-4.10 ng/L, and 0.038-11.36 ng/g, respectively. The predominant OCPs in water, SPM, and sediment were β-HCH, p,p'-DDE and PeCB. At site Y1, 8, 13, 18, β-HCH has a higher proportion in sediment samples, while, α-HCH has a higher proportion in SPM samples. The industrial use of HCHs in the history was the main HCHs source for most water and sediment samples, which indicated an absence of fresh inputs of industrial HCHs. Meanwhile, the abundance of p,p'-DDE in water, sediment and SPM samples could be attributed to long-term aerobic degradation of DDTs. The values of ffsw of HCHs, DDTs and PeCB indicate the transfer from water to sediment. Risk assessment showed that HCHs and DDTs posed low ecotoxicological risk to the Yangtze River.

Characterization and source identification of tetracycline antibiotics in the drinking water sources of the lower Yangtze River

The occurrence and spatio-temporal patterns of five tetracyclines (TCs) and six of their degradation products were investigated in twenty-eight drinking water sources along the lower Yangtze River (LYR) over dry, normal and flood seasons. Tetracycline (TC), oxytetracycline (OTC) and doxytetracycline (DXC) were the dominant antibiotics detected with the highest occurrence. The maximum concentrations of TC, OTC and DXC were found in dry season as 11.16, 18.98, and 56.09 ng/L, respectively, because of the low dilution, low degradation, and high consumption in this season. Cluster analysis indicated distinct variations in the TCs' compositional profiles in both space and time. OTC and its metabolites contributed 18.5-59.6% of the TC load in dry season, possibly due to the seasonally increased release of pharmaceutical OTCs from sewage effluents, but they were seldom detected in other seasons. Pollution load index analysis showed that tributaries carrying large amounts of veterinary TCs derived from breeding wastewater and untreated rural sewage contributed larger proportions of the TC load for most drinking water sources than sewage outlets. The contribution ratio of the TC load from tributaries (74.5%) was approximately three times higher than that from sewage discharges (25.5%). The study demonstrated that the control of load from tributaries is the key to mitigating TC pollution of the drinking water sources in the LYR. An effective source tracking method for evaluating the contribution of antibiotic load from multiple diffuse pollution origins and identifying the high-risk contamination sources was established for antibiotic management and control.

Temporal and spatial variations in zooplankton communities in relation to environmental factors in four floodplain lakes located in the middle reach of the Yangtze River, China

A comparative limnological study of the zooplankton communities and their relationship with environmental factors was conducted to test the temporal and spatial changes among lake groups. In our study of four lakes, the lowest gamma (γ) diversity was recorded in January 2017, with a total of 25 zooplankton taxa. The highest γ diversity was recorded in May 2016, with a total of 55 zooplankton taxa. Species turnover in space (β) were from 14.98 to 25.81. Markedly temporal and spatial variations were observed in the zooplankton community. The higher mean cladocera density (57.70 ind. L^-1 and 39.85 ind. L^-1) was observed in May and August, then decreased gradually with the lowest in January. The mean copepoda density ranged from 8.71 ind. L^-1 in January 2017 to 32.04 ind. L^-1 in August 2016. The mean rotifera density was significantly higher than that of the other two crustacean zooplankton (p < 0.01), within the range of 89.36-1139.2 ind. L^-1. We also observed that zooplankton density exhibited significant seasonal changes from NMDS (Nonmetric multidimensional scaling analysis). Redundancy analysis revealed that environmental factors, such as water temperature and transparency, have significantly influenced the zooplankton community structure.

Seasonal variation in the bacterial community composition of a large estuarine reservoir and response to cyanobacterial proliferation

This study employed high-throughput sequencing (HTS) to understand the variations in microbial community in the largest estuary reservoir located at the Yangtze River for a year. Correlations between the heterotrophic bacterial and cyanobacterial communities in the estuarine ecosystem were also investigated. Significant spatial and temporal changes were observed in the microbial community composition at all sites. These differences were mainly reflected on the variations of bacterial relative abundance. The modularity analysis on the network indicate that bacterial community response to the variations of environmental factors in the form of co-occurrence/exclusion patterns. In warm season, Synechococcus spp. being the dominant Cyanobacteria taxa exhibited high relative abundance in the reservoir. Water temperature was the critical driver for the proliferation of Synechococcus. Moreover, heterotrophic bacteria belonging to Actinobacteria, Proteobacteria (α-, β-, and γ-Proteobacteria), Bacteroidetes and Chlorobi, exhibited positive correlations with Synechococcus. The co-occurrence of these bacterial OTUs suggests that specific taxa may benefit from the proliferation of Synechococcus. In cold season, bacterial OTUs belonging to Actinobacteria and Bacteroidetes shown co-occurrence pattern with salt ions (including K⁺, Na⁺, Mg²⁺, Ca²⁺, Cl^- and SO₄^2-) inside the reservoir. In conclusion, further research is required to investigate the ecological functions of these taxa in estuarine ecosystems.

Estimation of nutrient discharge from the Yangtze River to the East China Sea and the identification of nutrient sources

Based on a time-series dataset and the mass balance method, the contributions of various sources to the nutrient discharges from the Yangtze River to the East China Sea are identified. The results indicate that the nutrient concentrations vary considerably among different sections of the Yangtze River. Non-point sources are an important source of nutrients to the Yangtze River, contributing about 36% and 63% of the nitrogen and phosphorus discharged into the East China Sea, respectively. Nutrient inputs from non-point sources vary among the sections of the Yangtze River, and the contributions of non-point sources increase from upstream to downstream. Considering the rice growing patterns in the Yangtze River Basin, the synchrony of rice tillering and the wet seasons might be an important cause of the high nutrient discharge from the non-point sources. Based on our calculations, a reduction of 0.99Tg per year in total nitrogen discharges from the Yangtze River would be needed to limit the occurrences of harmful algal blooms in the East China Sea to 15 times per year. The extensive construction of sewage treatment plants in urban areas may have only a limited effect on reducing the occurrences of harmful algal blooms in the future.

Macroinvertebrate communities and the relationships with biotic factors in river-connected lakes in the lower reaches of Yangtze River, China

The relationships of macroinvertebrate communities with abiotic factors in lake and river system were well documented, but their relationships with biotic factors were few explored. The macroinvertebrate communities in two river-disconnected lakes (Poyang Lake and Shijiu Lake) and the rivers connected to Shijiu Lake were investigated to reveal the differences in communities and explore the relationships with biotic factors. A total of 34 species were recorded in the three water bodies. Combined with the previous study results, the dominant species in Poyang Lake is almost unchanged since 1997. Mollusks were dominated in abundance in Poyang Lake and the rivers connected to Shijiu Lake, while oligochaetes dominated the communities in Shijiu Lake. The alpha diversity indices of macroinvertebrates in Poyang Lake and the rivers connected to Shijiu Lake were distinctly higher than that of Shijiu Lake, and the beta diversity index of Shijiu Lake was the highest, supporting the rules that alpha diversity of macroinvertebrates achieves a maximum at a moderate level of connectivity and beta diversity seems to be higher when the connectivity is weaker. The differences in communities were significant between the Poyang Lake and Shijiu Lake, while the differences in the Poyang Lake and the rivers connected to Shijiu Lake were not significant. According to the results of canonical correspondence analysis (CCA), protozoon densities and phytoplankton biomass affected the distribution of macroinvertebrates in Shijiu Lake. Species number of planktonic crustaceans influenced the distribution of macroinvertebrates in rivers connected to Shijiu Lake, while species number of rotifer and densities of phytoplankton distinctly impacted on the distribution of macroinvertebrates in Poyang Lake.

Temporal-spatial variation and source apportionment of soil heavy metals in the representative river-alluviation depositional system

The contributions of major driving forces on temporal changes of heavy metals in the soil in a representative river-alluviation area at the lower of Yangtze River were successfully quantified by combining geostatistics analysis with the modified principal component scores & multiple linear regressions approach (PCS-MLR). The results showed that the temporal (2003-2014) changes of Cu, Zn, Ni and Cr presented a similar spatial distribution pattern, whereas the Cd and Hg showed the distinctive patterns. The temporal changes of soil Cu, Zn, Ni and Cr may be predominated by the emission of the shipbuilding industry, whereas the significant changes of Cd and Hg were possibly predominated by the geochemical and geographical processes, such as the erosion of the Yangtze River water and leaching because of soil acidification. The emission of metal-bearing shipbuilding industry contributed an estimated 74%-83% of the changes in concentrations of Cu, Zn, Ni and Cr, whereas the geochemical and geographical processes may contribute 58% of change of Cd in the soil and 59% of decrease of Hg.