1
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Peacock M, Lawson C, Gowing D, Gauci V. Water table depth and plant species determine the direction and magnitude of methane fluxes in floodplain meadow soils. Ecol Evol 2024; 14:e11147. [PMID: 38469053 PMCID: PMC10925825 DOI: 10.1002/ece3.11147] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/08/2023] [Revised: 01/22/2024] [Accepted: 02/29/2024] [Indexed: 03/13/2024] Open
Abstract
Methane (CH4) is a powerful greenhouse gas with ongoing efforts aiming to quantify and map emissions from natural and managed ecosystems. Wetlands play a significant role in the global CH4 budget, but uncertainties in their total emissions remain large, due to a combined lack of CH4 data and fuzzy boundaries between mapped ecosystem categories. European floodplain meadows are anthropogenic ecosystems that originated due to traditional management for hay cropping. These ecosystems are seasonally inundated by river water, and straddle the boundary between grassland and wetland ecosystems; however, an understanding of their CH4 function is lacking. Here, we established a replicated outdoor floodplain-meadow mesocosm experiment to test how water table depth (45, 30, 15 cm below the soil surface) and plant composition affect CH4 fluxes over an annual cycle. Water table was a major controller on CH4, with significantly higher fluxes (overall mean 9.3 mg m-2 d-1) from the high (15 cm) water table treatment. Fluxes from high water table mesocosms with bare soil were low (mean 0.4 mg m-2 d-1), demonstrating that vegetation drove high emissions. Larger emissions came from high water table mesocosms with aerenchymatous plant species (e.g. Alopecurus pratensis, mean 12.8 mg m-2 d-1), suggesting a role for plant-mediated transport. However, at low (45 cm) water tables A. pratensis mesocosms were net CH4 sinks, suggesting that there is plasticity in CH4 exchange if aerenchyma are present. Plant cutting to simulate a hay harvest had no effect on CH4, further supporting a role for plant-mediated transport. Upscaling our CH4 fluxes to a UK floodplain meadow using hydrological modelling showed that the meadow was a net CH4 source because oxic periods of uptake were outweighed by flooding-induced anoxic emissions. Our results show that floodplain meadows can be either small sources or sinks of CH4 over an annual cycle. Their CH4 exchange appears to respond to soil temperature, moisture status and community composition, all of which are likely to be modified by climate change, leading to uncertainty around the future net contribution of floodplain meadows to the CH4 cycle.
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Affiliation(s)
- Mike Peacock
- Department of Geography and Planning, School of Environmental SciencesUniversity of LiverpoolLiverpoolUK
- Department of Aquatic Sciences and AssessmentSwedish University of Agricultural SciencesUppsalaSweden
| | - Clare Lawson
- School of Environment, Earth and Ecosystem SciencesOpen UniversityMilton KeynesUK
| | - David Gowing
- School of Environment, Earth and Ecosystem SciencesOpen UniversityMilton KeynesUK
| | - Vincent Gauci
- Birmingham Institute of Forest ResearchUniversity of BirminghamBirminghamUK
- School of Geography Earth and Environmental ScienceUniversity of BirminghamBirminghamUK
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2
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Garfì V, Garfì G. Differential Tree Growth Response to Management History and Climate in Multi-Aged Stands of Pinus pinea L. Plants (Basel) 2023; 13:61. [PMID: 38202368 PMCID: PMC10780625 DOI: 10.3390/plants13010061] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/28/2023] [Revised: 12/19/2023] [Accepted: 12/21/2023] [Indexed: 01/12/2024]
Abstract
The possible differential response to the climatic fluctuations of co-occurring trees of different ages is still poorly known and rather controversial. Moreover, in managed forests, such a picture is further complicated by the impact of silvicultural practices. With this concern, in a multi-aged umbrella pine stand in the Maremma Regional Park (Tuscany, Italy), the spatial patterns and tree-ring response to the climate were investigated by differentiating trees into three classes, i.e., young, mature, and old. The aim was to assess the role of past management in shaping the current stand structure and affecting the growth dynamics at different ages, as well as to evaluate the possible shifting of tree adaptation to the climatic variables throughout plant aging. Our outcomes proved that the current mosaic of even-aged small patches results from a multifaceted forest management history. Until the 1960s, silvicultural treatments seemed more suitable in promoting tree growth and regeneration. Later on, inappropriate and/or untimely thinning probably triggered excessive competition from the top canopy trees, involving reduced stem and root system development in the younger plants living in the understory. Also, the intra-annual growth response to the climate showed some dependence on age. Younger trees are assumed not to be able to efficiently exploit water resources from the deep aquifer during the dry season, probably due to an insufficiently developed taproot, differently than older trees. Accordingly, appropriate and timely thinning, simulating frequent natural disturbances on small areas, could be a suitable management approach to promote sustained growth rates and regeneration processes, as well as healthy and vital trees at all life stages.
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Affiliation(s)
- Vittorio Garfì
- Department of Bioscience and Territory, University of Molise, c/da Fonte Lappone, I-86090 Pesche, Italy;
| | - Giuseppe Garfì
- Institute of Biosciences and BioResources, National Research Council, Via Ugo la Malfa, 153, I-90146 Palermo, Italy
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3
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Buttler A, Bragazza L, Laggoun-Défarge F, Gogo S, Toussaint ML, Lamentowicz M, Chojnicki BH, Słowiński M, Słowińska S, Zielińska M, Reczuga M, Barabach J, Marcisz K, Lamentowicz Ł, Harenda K, Lapshina E, Gilbert D, Schlaepfer R, Jassey VEJ. Ericoid shrub encroachment shifts aboveground-belowground linkages in three peatlands across Europe and Western Siberia. Glob Chang Biol 2023; 29:6772-6793. [PMID: 37578632 DOI: 10.1111/gcb.16904] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/24/2023] [Revised: 07/19/2023] [Accepted: 07/23/2023] [Indexed: 08/15/2023]
Abstract
In northern peatlands, reduction of Sphagnum dominance in favour of vascular vegetation is likely to influence biogeochemical processes. Such vegetation changes occur as the water table lowers and temperatures rise. To test which of these factors has a significant influence on peatland vegetation, we conducted a 3-year manipulative field experiment in Linje mire (northern Poland). We manipulated the peatland water table level (wet, intermediate and dry; on average the depth of the water table was 17.4, 21.2 and 25.3 cm respectively), and we used open-top chambers (OTCs) to create warmer conditions (on average increase of 1.2°C in OTC plots compared to control plots). Peat drying through water table lowering at this local scale had a larger effect than OTC warming treatment per see on Sphagnum mosses and vascular plants. In particular, ericoid shrubs increased with a lower water table level, while Sphagnum decreased. Microclimatic measurements at the plot scale indicated that both water-level and temperature, represented by heating degree days (HDDs), can have significant effects on the vegetation. In a large-scale complementary vegetation gradient survey replicated in three peatlands positioned along a transitional oceanic-continental and temperate-boreal (subarctic) gradient (France-Poland-Western Siberia), an increase in ericoid shrubs was marked by an increase in phenols in peat pore water, resulting from higher phenol concentrations in vascular plant biomass. Our results suggest a shift in functioning from a mineral-N-driven to a fungi-mediated organic-N nutrient acquisition with shrub encroachment. Both ericoid shrub encroachment and higher mean annual temperature in the three sites triggered greater vascular plant biomass and consequently the dominance of decomposers (especially fungi), which led to a feeding community dominated by nematodes. This contributed to lower enzymatic multifunctionality. Our findings illustrate mechanisms by which plants influence ecosystem responses to climate change, through their effect on microbial trophic interactions.
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Affiliation(s)
- Alexandre Buttler
- School of Architecture, Civil and Environmental Engineering (ENAC), Ecole Polytechnique Fédérale de Lausanne (EPFL), Lausanne, Switzerland
- Swiss Federal Institute for Forest, Snow and Landscape Research WSL, Lausanne, Switzerland
| | - Luca Bragazza
- Agroscope, Field-Crop Systems and Plant Nutrition, Nyon, Switzerland
| | | | - Sebastien Gogo
- UMR-CNRS 6553 ECOBIO, Université de Rennes, Rennes, France
| | - Marie-Laure Toussaint
- Laboratoire de Chrono-Environnement, UMR, CNRS 6249, UFR des Sciences et Techniques, Université de Franche-Comté, Besançon, France
| | - Mariusz Lamentowicz
- Climate Change Ecology Research Unit, Faculty of Geographical and Geological Sciences, Adam Mickiewicz University, Poznań, Poland
| | - Bogdan H Chojnicki
- Laboratory of Bioclimatology, Department of Ecology and Environmental Protection, Faculty of Environmental and Mechanical Engineering, Poznan University of Life Sciences, Poznań, Poland
| | - Michał Słowiński
- Past Landscape Dynamic Laboratory, Institute of Geography and Spatial Organization, Polish Academy of Sciences, Warsaw, Poland
| | - Sandra Słowińska
- Climate Research Department, Institute of Geography and Spatial Organization, Polish Academy of Sciences, Warsaw, Poland
| | - Małgorzata Zielińska
- Climate Change Ecology Research Unit, Faculty of Geographical and Geological Sciences, Adam Mickiewicz University, Poznań, Poland
| | - Monika Reczuga
- Climate Change Ecology Research Unit, Faculty of Geographical and Geological Sciences, Adam Mickiewicz University, Poznań, Poland
| | - Jan Barabach
- Department of Land Improvement, Environmental Development and Spatial Management, Poznan University of Life Sciences, Poznań, Poland
| | - Katarzyna Marcisz
- Climate Change Ecology Research Unit, Faculty of Geographical and Geological Sciences, Adam Mickiewicz University, Poznań, Poland
| | - Łukasz Lamentowicz
- Climate Change Ecology Research Unit, Faculty of Geographical and Geological Sciences, Adam Mickiewicz University, Poznań, Poland
| | - Kamila Harenda
- Laboratory of Bioclimatology, Department of Ecology and Environmental Protection, Faculty of Environmental and Mechanical Engineering, Poznan University of Life Sciences, Poznań, Poland
| | | | - Daniel Gilbert
- Laboratoire de Chrono-Environnement, UMR, CNRS 6249, UFR des Sciences et Techniques, Université de Franche-Comté, Besançon, France
| | - Rodolphe Schlaepfer
- School of Architecture, Civil and Environmental Engineering (ENAC), Ecole Polytechnique Fédérale de Lausanne (EPFL), Lausanne, Switzerland
| | - Vincent E J Jassey
- School of Architecture, Civil and Environmental Engineering (ENAC), Ecole Polytechnique Fédérale de Lausanne (EPFL), Lausanne, Switzerland
- Swiss Federal Institute for Forest, Snow and Landscape Research WSL, Lausanne, Switzerland
- Laboratoire d'Ecologie Fonctionnelle et Environnement, CNRS, Université de Toulouse, Toulouse, France
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4
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Cichello A, Bruch A, Earl HJ. A novel method for irrigating plants, tracking water use, and imposing water deficits in controlled environments. Front Plant Sci 2023; 14:1201102. [PMID: 37711304 PMCID: PMC10497755 DOI: 10.3389/fpls.2023.1201102] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 04/06/2023] [Accepted: 07/18/2023] [Indexed: 09/16/2023]
Abstract
The study of genomic control of drought tolerance in crops requires techniques to impose well defined and consistent levels of drought stress and efficiently measure single-plant water use for hundreds of experimental units over timescales of several months. Traditional gravimetric methods are extremely labor intensive or require expensive technology, and are subject to other errors. This study demonstrates a low-cost, passive, bottom-watered system that is easily scaled for high-throughput phenotyping. The soil water content in the pots is controlled by altering the water table height in an underlying wicking bed via a float valve. The resulting soil moisture profile is then maintained passively as water withdrawn by the plant is replaced by upward movement of water from the wicking bed, which is fed from a reservoir via the float valve. The single-plant water use can be directly measured over time intervals from one to several days by observing the water level in the reservoir. Using this method, four different drought stress levels were induced in pots containing soybean (Glycine max (L.) Merr.), producing four statistically distinct groups for shoot dry weight and seed yield, as well as clear treatment effects for other relevant parameters, including root:shoot dry weight ratio, pod number, cumulative water use, and water use efficiency. This system has a broad range of applications, and should increase feasibility of high-throughput phenotyping efforts for plant drought tolerance traits.
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Affiliation(s)
| | | | - Hugh J. Earl
- Department of Plant Agriculture, University of Guelph, Guelph, ON, Canada
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5
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Tang Y, Chen C, Qian B, Ren J, Guan Y. Plate Load Tests on an Unsaturated Sand-Kaolin Mixture with Varying Water Table. Sensors (Basel) 2022; 22:s22062161. [PMID: 35336332 PMCID: PMC8950206 DOI: 10.3390/s22062161] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 02/22/2022] [Revised: 03/08/2022] [Accepted: 03/09/2022] [Indexed: 02/06/2023]
Abstract
Clayey sand is widely distributed and commonly encountered in geotechnical engineering practice. To understand its bearing capacity behavior under unsaturated conditions, plate load tests are performed on sand-kaolin mixture samples with varying water tables. The distributions of suction and volumetric water content with depth are measured by vibrating wire piezometers and soil moisture sensors, respectively. It is shown by the test results that the bearing capacity increases when the water table in the soil sample drops. The influence of suction on the bearing capacity is found to be dependent on the height of the water table and the hydraulic loading history of the soil sample. The plate load test results are interpreted using bearing capacity equations. Good agreement is obtained between measured and calculated bearing capacities. This study provides a simple method to estimate the bearing capacity of in situ unsaturated soil foundations.
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6
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Lamit LJ, Romanowicz KJ, Potvin LR, Lennon JT, Tringe SG, Chimner RA, Kolka RK, Kane ES, Lilleskov EA. Peatland microbial community responses to plant functional group and drought are depth-dependent. Mol Ecol 2021; 30:5119-5136. [PMID: 34402116 DOI: 10.1111/mec.16125] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/04/2020] [Revised: 07/14/2021] [Accepted: 07/27/2021] [Indexed: 12/27/2022]
Abstract
Peatlands store one-third of Earth's soil carbon, the stability of which is uncertain due to climate change-driven shifts in hydrology and vegetation, and consequent impacts on microbial communities that mediate decomposition. Peatland carbon cycling varies over steep physicochemical gradients characterizing vertical peat profiles. However, it is unclear how drought-mediated changes in plant functional groups (PFGs) and water table (WT) levels affect microbial communities at different depths. We combined a multiyear mesocosm experiment with community sequencing across a 70-cm depth gradient, to test the hypotheses that vascular PFGs (Ericaceae vs. sedges) and WT (high vs. low) structure peatland microbial communities in depth-dependent ways. Several key results emerged. (i) Both fungal and prokaryote (bacteria and archaea) community structure shifted with WT and PFG manipulation, but fungi were much more sensitive to PFG whereas prokaryotes were much more sensitive to WT. (ii) PFG effects were largely driven by Ericaceae, although sedge effects were evident in specific cases (e.g., methanotrophs). (iii) Treatment effects varied with depth: the influence of PFG was strongest in shallow peat (0-10, 10-20 cm), whereas WT effects were strongest at the surface and middle depths (0-10, 30-40 cm), and all treatment effects waned in the deepest peat (60-70 cm). Our results underline the depth-dependent and taxon-specific ways that plant communities and hydrologic variability shape peatland microbial communities, pointing to the importance of understanding how these factors integrate across soil profiles when examining peatland responses to climate change.
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Affiliation(s)
- Louis J Lamit
- College of Forest Resources and Environmental Science, Michigan Technological University, Houghton, Michigan, USA
| | - Karl J Romanowicz
- College of Forest Resources and Environmental Science, Michigan Technological University, Houghton, Michigan, USA
| | - Lynette R Potvin
- USDA Forest Service Northern Research Station, Houghton, Michigan, USA
| | - Jay T Lennon
- Department of Biology, Indiana University, Bloomington, Indiana, USA
| | - Susannah G Tringe
- DOE Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, California, USA
| | - Rodney A Chimner
- College of Forest Resources and Environmental Science, Michigan Technological University, Houghton, Michigan, USA
| | - Randall K Kolka
- USDA Forest Service Northern Research Station, Grand Rapids, Minnesota, USA
| | - Evan S Kane
- College of Forest Resources and Environmental Science, Michigan Technological University, Houghton, Michigan, USA.,USDA Forest Service Northern Research Station, Houghton, Michigan, USA
| | - Erik A Lilleskov
- USDA Forest Service Northern Research Station, Houghton, Michigan, USA
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7
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Abstract
Methane (CH4) emissions from pan-Arctic wetlands provide a potential positive feedback to global warming. However, the differences in CH4 emissions across wetland types in these regions have not been well understood. We synthesized approximately 9000 static chamber CH4 measurements during the growing season from 83 sites across pan-Arctic regions. We highlighted spatial variations of CH4 emissions corresponding to environmental heterogeneity across wetland types. CH4 emission is the highest in fens, followed by marshes, bogs, and the lowest in swamps. This gradient is controlled by the water table, soil temperature, and dominant plant functional types and their interactions. The water table position for maximum CH4 emission is below, close to, and above the ground surface in bogs, marshes/fens, and swamps, respectively. The temperature sensitivity (Q10) of CH4 emissions varied among different wetland types, ranging from the lowest in swamps to the highest in fens. The interactive impact of temperature and the water table positions on CH4 emissions are regulated with dominant plant functional types. CH4 emissions from wetlands dominated by vascular plants rely more on species composition than that dominated by non-vascular plants. Wetlands with greater abundance of graminoids (e.g., fens) have higher CH4 emissions than tree-dominated wetlands (e.g., swamps). This synthesis emphasizes the role of wetland heterogeneity in determining the strength of CH4 emissions.
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Affiliation(s)
- Tao Bao
- Key Laboratory of Regional Climate-Environment for Temperate East Asia, Institute of Atmospheric Physics, Chinese Academy of Sciences, Beijing 100029, China
| | - Gensuo Jia
- Key Laboratory of Regional Climate-Environment for Temperate East Asia, Institute of Atmospheric Physics, Chinese Academy of Sciences, Beijing 100029, China
| | - Xiyan Xu
- Key Laboratory of Regional Climate-Environment for Temperate East Asia, Institute of Atmospheric Physics, Chinese Academy of Sciences, Beijing 100029, China
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8
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Tian W, Xiang X, Wang H. Differential Impacts of Water Table and Temperature on Bacterial Communities in Pore Water From a Subalpine Peatland, Central China. Front Microbiol 2021; 12:649981. [PMID: 34122363 PMCID: PMC8193233 DOI: 10.3389/fmicb.2021.649981] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/06/2021] [Accepted: 04/01/2021] [Indexed: 11/21/2022] Open
Abstract
The level of water table and temperature are two environmental variables shaping soil bacterial communities, particularly in peatland ecosystems. However, discerning the specific impact of these two factors on bacterial communities in natural ecosystems is challenging. To address this issue, we collected pore water samples across different months (August and November in 2017 and May 2018) with a gradient of water table changes and temperatures at the Dajiuhu peatland, Central China. The samples were analyzed with 16S rRNA high-throughput sequencing and Biolog EcoMicroplates. Bacterial communities varied in the relative abundances of dominant taxa and harbored exclusive indicator operational taxonomic units across the different months. Despite these differences, bacterial communities showed high similarities in carbon utilization, with preferences for esters (pyruvic acid methyl ester, Tween 40, Tween 80, and D-galactonic acid γ-lactone), amino acids (L-arginine and L-threonine), and amines (phenylethylamine and putrescine). However, rates of carbon utilization (as indicated by average well-color development) and metabolic diversity (McIntosh and Shannon index) in May and August were higher than those in November. Redundancy analysis revealed that the seasonal variations in bacterial communities were significantly impacted by the level of the water table, whereas the temperature had a fundamental role in bacterial carbon utilization rate. Co-occurrence analysis identified Sphingomonas, Mucilaginibacter, Novosphingobium, Lacunisphaera, Herminiimonas, and Bradyrhizobium as keystone species, which may involve in the utilization of organic compounds such as amino acids, phenols, and others. Our findings suggest that bacterial community functions were more stable than their compositions in the context of water table changes. These findings significantly expand our current understanding of the variations of bacterial community structures and metabolic functions in peatland ecosystems in the context of global warming and fluctuation of the water table.
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Affiliation(s)
- Wen Tian
- State Key Laboratory of Biogeology and Environmental Geology, China University of Geosciences, Wuhan, China
- School of Environmental Studies, China University of Geosciences, Wuhan, China
| | - Xing Xiang
- State Key Laboratory of Biogeology and Environmental Geology, China University of Geosciences, Wuhan, China
- College of Life Science, Shangrao Normal University, Shangrao, China
| | - Hongmei Wang
- State Key Laboratory of Biogeology and Environmental Geology, China University of Geosciences, Wuhan, China
- School of Environmental Studies, China University of Geosciences, Wuhan, China
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9
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Zhong Q, Xue D, Chen H, Liu L, He Y, Zhu D, He Z. Structure and distribution of nitrite-dependent anaerobic methane oxidation bacteria vary with water tables in Zoige peatlands. FEMS Microbiol Ecol 2020; 96:5800981. [PMID: 32149349 DOI: 10.1093/femsec/fiaa039] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/05/2019] [Accepted: 03/06/2020] [Indexed: 11/12/2022] Open
Abstract
The recently discovered nitrite-dependent anaerobic methane oxidation (n-damo) is an important methane sink in natural ecosystems performed by NC10 phylum bacteria. However, the effect of water table (WT) gradient due to global change on n-damo bacterial communities is not well studied in peatlands. Here, we analysed the vertical distribution (0-100 cm) of n-damo bacterial communities at three sites with different WTs of the Zoige peatlands in the Qinghai-Tibetan Plateau. Using an n-damo bacterial specific 16S rRNA gene clone library, we obtained 25 operational taxonomic units (OTUs) that could be divided into Groups A, B, C, D and E (dominated by A and B). The dominant group was Group B at the high (OTU14 and OTU20) and intermediate (OTU7 and OTU8) WT sites and Group A was dominant at the low WT site (OTU6 and OTU5). Using high-throughput sequencing, we observed that n-damo bacteria mainly distributed in subsurface soils (50-60 and 20-30 cm), and their relative abundances were higher at the low WT site than at the other two sites. In addition, we found that pH and nitrate were positively correlated with Group A, while total organic carbon, total nitrogen and ammonia were positively associated with Group B. Our study provides new insights into our understanding of the response of n-damo bacteria to WT gradient in peatlands, with important implications for global change.
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Affiliation(s)
- Qiuping Zhong
- Environmental Microbiomics Research Center, School of Environmental Science and Engineering, Southern Marine Science and Engineering Guangdong Laboratory (Zhuhai), Sun Yat-sen University, Guangzhou 510006, China.,Key Laboratory of Mountain Ecological Restoration and Bioresource Utilization & Ecological Restoration Biodiversity Conservation Key Laboratory of Sichuan Province, Chengdu Institute of Biology, Chinese Academy of Sciences, Chengdu 610041, China.,Zoige Peatland and Global Change Research Station, Chinese Academy of Sciences, Hongyuan 624400, China
| | - Dan Xue
- Key Laboratory of Mountain Ecological Restoration and Bioresource Utilization & Ecological Restoration Biodiversity Conservation Key Laboratory of Sichuan Province, Chengdu Institute of Biology, Chinese Academy of Sciences, Chengdu 610041, China.,Zoige Peatland and Global Change Research Station, Chinese Academy of Sciences, Hongyuan 624400, China
| | - Huai Chen
- Key Laboratory of Mountain Ecological Restoration and Bioresource Utilization & Ecological Restoration Biodiversity Conservation Key Laboratory of Sichuan Province, Chengdu Institute of Biology, Chinese Academy of Sciences, Chengdu 610041, China.,Zoige Peatland and Global Change Research Station, Chinese Academy of Sciences, Hongyuan 624400, China.,CAS Center for Excellence in Tibetan Plateau Earth Sciences, Beijing 100101, China
| | - Liangfeng Liu
- Key Laboratory of Mountain Ecological Restoration and Bioresource Utilization & Ecological Restoration Biodiversity Conservation Key Laboratory of Sichuan Province, Chengdu Institute of Biology, Chinese Academy of Sciences, Chengdu 610041, China.,Zoige Peatland and Global Change Research Station, Chinese Academy of Sciences, Hongyuan 624400, China
| | - Yixin He
- Key Laboratory of Mountain Ecological Restoration and Bioresource Utilization & Ecological Restoration Biodiversity Conservation Key Laboratory of Sichuan Province, Chengdu Institute of Biology, Chinese Academy of Sciences, Chengdu 610041, China.,Zoige Peatland and Global Change Research Station, Chinese Academy of Sciences, Hongyuan 624400, China
| | - Dan Zhu
- Key Laboratory of Mountain Ecological Restoration and Bioresource Utilization & Ecological Restoration Biodiversity Conservation Key Laboratory of Sichuan Province, Chengdu Institute of Biology, Chinese Academy of Sciences, Chengdu 610041, China.,Zoige Peatland and Global Change Research Station, Chinese Academy of Sciences, Hongyuan 624400, China
| | - Zhili He
- Environmental Microbiomics Research Center, School of Environmental Science and Engineering, Southern Marine Science and Engineering Guangdong Laboratory (Zhuhai), Sun Yat-sen University, Guangzhou 510006, China
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10
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Rinne J, Tuovinen JP, Klemedtsson L, Aurela M, Holst J, Lohila A, Weslien P, Vestin P, Łakomiec P, Peichl M, Tuittila ES, Heiskanen L, Laurila T, Li X, Alekseychik P, Mammarella I, Ström L, Crill P, Nilsson MB. Effect of the 2018 European drought on methane and carbon dioxide exchange of northern mire ecosystems. Philos Trans R Soc Lond B Biol Sci 2020; 375:20190517. [PMID: 32892729 PMCID: PMC7485098 DOI: 10.1098/rstb.2019.0517] [Citation(s) in RCA: 19] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022] Open
Abstract
We analysed the effect of the 2018 European drought on greenhouse gas (GHG) exchange of five North European mire ecosystems. The low precipitation and high summer temperatures in Fennoscandia led to a lowered water table in the majority of these mires. This lowered both carbon dioxide (CO2) uptake and methane (CH4) emission during 2018, turning three out of the five mires from CO2 sinks to sources. The calculated radiative forcing showed that the drought-induced changes in GHG fluxes first resulted in a cooling effect lasting 15–50 years, due to the lowered CH4 emission, which was followed by warming due to the lower CO2 uptake. This article is part of the theme issue ‘Impacts of the 2018 severe drought and heatwave in Europe: from site to continental scale’.
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Affiliation(s)
- J Rinne
- Department of Physical Geography and Ecosystem Science, Lund University, Sweden
| | - J-P Tuovinen
- Climate System Research, Finnish Meteorological Institute, Helsinki, Finland
| | - L Klemedtsson
- Department of Earth Sciences, University of Gothenburg, Sweden
| | - M Aurela
- Climate System Research, Finnish Meteorological Institute, Helsinki, Finland
| | - J Holst
- Department of Physical Geography and Ecosystem Science, Lund University, Sweden
| | - A Lohila
- Climate System Research, Finnish Meteorological Institute, Helsinki, Finland.,INAR Institute for Atmospheric and Earth System Research/Physics, Faculty of Science, University of Helsinki, Finland
| | - P Weslien
- Department of Earth Sciences, University of Gothenburg, Sweden
| | - P Vestin
- Department of Physical Geography and Ecosystem Science, Lund University, Sweden
| | - P Łakomiec
- Department of Physical Geography and Ecosystem Science, Lund University, Sweden
| | - M Peichl
- Department of Forest Ecology and Management, Swedish Agricultural University, Umeå, Sweden
| | - E-S Tuittila
- INAR Institute for Atmospheric and Earth System Research/Physics, Faculty of Science, University of Helsinki, Finland.,School of Forest Sciences, University of Eastern Finland, Joensuu, Finland
| | - L Heiskanen
- Climate System Research, Finnish Meteorological Institute, Helsinki, Finland
| | - T Laurila
- Climate System Research, Finnish Meteorological Institute, Helsinki, Finland
| | - X Li
- INAR Institute for Atmospheric and Earth System Research/Physics, Faculty of Science, University of Helsinki, Finland
| | - P Alekseychik
- INAR Institute for Atmospheric and Earth System Research/Physics, Faculty of Science, University of Helsinki, Finland.,Bioeconomy and Environment, Natural Resources Institute Finland, Helsinki, Finland
| | - I Mammarella
- INAR Institute for Atmospheric and Earth System Research/Physics, Faculty of Science, University of Helsinki, Finland
| | - L Ström
- Department of Physical Geography and Ecosystem Science, Lund University, Sweden
| | - P Crill
- Department of Geological Sciences and Bolin Centre for Climate Research, Stockholm University, Sweden
| | - M B Nilsson
- Department of Forest Ecology and Management, Swedish Agricultural University, Umeå, Sweden
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11
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Li W, Chen H, Yan Z, Yang G, Rui J, Wu N, He Y. Variation in the Soil Prokaryotic Community Under Simulated Warming and Rainfall Reduction in Different Water Table Peatlands of the Zoige Plateau. Front Microbiol 2020; 11:343. [PMID: 32256463 PMCID: PMC7093333 DOI: 10.3389/fmicb.2020.00343] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/14/2019] [Accepted: 02/17/2020] [Indexed: 11/13/2022] Open
Abstract
Climate change and water table drawdown impact the community structure and diversity of peatland soil prokaryotes. Nonetheless, how soil prokaryotes of different water tables respond to climate change remains largely unknown. This study used 16S rRNA gene sequencing to evaluate the variation in soil prokaryotes under scenarios of warming, rainfall reduction, and their combination in different water table peatlands on the Zoige Plateau in China. Stimulated climate change affected some of the diversity indexes and relative abundances of soil prokaryotes in three water table peatlands. Additionally, those from the dry-rewetting event peatland had the most dominant phyla (genera) that showed significant changes in a relative abundance due to the simulated climate change treatments. Regarding functional microbial groups of carbon and nitrogen cycling, simulated climate change did not affect the abundances of the Euryarchaeota, Proteobacteria, Verrucomicrobia, and Methanobacterium in three water table peatlands, except NC10 and Nitrospirae. Redundancy analysis showed that the prokaryotic community variation was primary impacted by site properties of the different water table peatlands rather than the simulated climate change treatments. Moreover, the water table, total carbon, total nitrogen, and soil pH were the primary factors for the overall variation in the soil prokaryotic structure. This study provides a theoretical guidance for management strategies in the Zoige peatland, under climate change scenarios. More attention should be given to the interactive effects of peatland water table drawdown and simulated climate changes for better restorative efforts in water table drawdown, rather than simply adapting to climate change.
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Affiliation(s)
- Wei Li
- Key Laboratory of Mountain Ecological Restoration and Bioresource Utilization and Ecological Restoration Biodiversity Conservation Key Laboratory of Sichuan Province, Chengdu Institute of Biology, Chinese Academy of Sciences, Chengdu, China
- Zoige Peatland and Global Change Research Station, Chinese Academy of Sciences, Hongyuan, China
- School of Ecology and Environmental Sciences and Yunnan Key Laboratory for Plateau Mountain Ecology and Restoration of Degraded Environments, Yunnan University, Kunming, China
| | - Huai Chen
- Key Laboratory of Mountain Ecological Restoration and Bioresource Utilization and Ecological Restoration Biodiversity Conservation Key Laboratory of Sichuan Province, Chengdu Institute of Biology, Chinese Academy of Sciences, Chengdu, China
- Zoige Peatland and Global Change Research Station, Chinese Academy of Sciences, Hongyuan, China
- Center for Excellence in Tibetan Plateau Earth Sciences, Chinese Academy of Sciences, Beijing, China
| | - Zhiying Yan
- Key Laboratory of Mountain Ecological Restoration and Bioresource Utilization and Ecological Restoration Biodiversity Conservation Key Laboratory of Sichuan Province, Chengdu Institute of Biology, Chinese Academy of Sciences, Chengdu, China
| | - Gang Yang
- School of Life Sciences and Engineering, Southwest University of Science and Technology, Mianyang, China
| | - Junpeng Rui
- Key Laboratory of Mountain Ecological Restoration and Bioresource Utilization and Ecological Restoration Biodiversity Conservation Key Laboratory of Sichuan Province, Chengdu Institute of Biology, Chinese Academy of Sciences, Chengdu, China
| | - Ning Wu
- Key Laboratory of Mountain Ecological Restoration and Bioresource Utilization and Ecological Restoration Biodiversity Conservation Key Laboratory of Sichuan Province, Chengdu Institute of Biology, Chinese Academy of Sciences, Chengdu, China
- Zoige Peatland and Global Change Research Station, Chinese Academy of Sciences, Hongyuan, China
| | - Yixin He
- Key Laboratory of Mountain Ecological Restoration and Bioresource Utilization and Ecological Restoration Biodiversity Conservation Key Laboratory of Sichuan Province, Chengdu Institute of Biology, Chinese Academy of Sciences, Chengdu, China
- Zoige Peatland and Global Change Research Station, Chinese Academy of Sciences, Hongyuan, China
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12
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Jansson R, Ström L, Nilsson C. Smaller future floods imply less habitat for riparian plants along a boreal river. Ecol Appl 2019; 29:e01977. [PMID: 31323161 DOI: 10.1002/eap.1977] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/12/2018] [Revised: 05/14/2019] [Accepted: 06/14/2019] [Indexed: 06/10/2023]
Abstract
Climate-change projections suggest large changes in riverine flow regime, which will likely alter riparian communities. In northern Europe, forecasts propose lower annual spring flood peaks and higher winter flows, resulting in narrower riparian zones. To estimate the impact of climate change on habitat extent of riparian plants, we developed a framework estimating the sensitivity and exposure of individual species to streamflow change, and surveyed five reaches along the free-flowing Vindel River in northern Sweden. We modeled the hydrologic niche of riparian plant species based on the probability of occurrence along gradients of flood frequency and duration and used predicted future water-level fluctuations (based on climate models and IPCC emission scenarios) to calculate changes in flow-related habitat availability of individual species. Despite projected increases in runoff, we predict most species to decrease in riparian elevational extent by on average 12-29% until the end of the century, depending on scenario. Species growing in the upper, spring-flood-controlled part of the riparian zone will likely lose most habitat, with the largest reductions in species with narrow ranges of inundation duration tolerance (decreases of up to 54%). In contrast, the elevational extent of most amphibious species is predicted to increase, but conditions creating isoëtid vegetation will become rarer or disappear: isoëtid vegetation is presently found in areas where ice formed in the fall settles on the riverbank during the winter as water levels subside. Higher winter flows will make these conditions rare. We argue that our framework is useful to project the effects of hydrologic change caused by climate change as well as other stressors such as flow regulation also in other regions. With few rivers remaining unaffected by dams and other human stressors, these results call for monitoring to detect species declines. Management to alleviate species losses might include mitigation of habitat degradation from land-use activities, more environmentally friendly flow schemes, and more intensive management options such as mowing riparian meadows no longer regularly maintained by recurrent floods.
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Affiliation(s)
- Roland Jansson
- Department of Ecology and Environmental Science, Umeå University, Umeå, SE-901 87, Sweden
| | - Lotta Ström
- Department of Ecology and Environmental Science, Umeå University, Umeå, SE-901 87, Sweden
| | - Christer Nilsson
- Department of Ecology and Environmental Science, Umeå University, Umeå, SE-901 87, Sweden
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13
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Tian W, Wang H, Xiang X, Wang R, Xu Y. Structural Variations of Bacterial Community Driven by Sphagnum Microhabitat Differentiation in a Subalpine Peatland. Front Microbiol 2019; 10:1661. [PMID: 31396183 PMCID: PMC6667737 DOI: 10.3389/fmicb.2019.01661] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/31/2019] [Accepted: 07/04/2019] [Indexed: 11/13/2022] Open
Abstract
Sphagnum microbiomes play an important role in the northern peatland ecosystems. However, information about above and belowground microbiomes related to Sphagnum at subtropical area remains largely limited. In this study, microbial communities from Sphagnum palustre peat, S. palustre green part, and S. palustre brown part at the Dajiuhu Peatland, in central China were investigated via 16S rRNA gene amplicon sequencing. Results indicated that Alphaproteobacteria was the dominant class in all samples, and the classes Acidobacteria and Gammaproteobacteria were abundant in S. palustre peat and S. palustre brown part samples, respectively. In contrast, the class Cyanobacteria dominated in S. palustre green part samples. Microhabitat differentiation mainly contributes to structural differences of bacterial microbiome. In the S. palustre peat, microbial communities were significantly shaped by water table and total nitrogen content. Our study is a systematical investigation on above and belowground bacterial microbiome in a subalpine Sphagnum peatland and the results offer new knowledge about the distribution of bacterial microbiome associated with different microhabitats in subtropical area.
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Affiliation(s)
- Wen Tian
- State Key Laboratory of Biogeology and Environmental Geology, China University of Geosciences, Wuhan, China
| | - Hongmei Wang
- State Key Laboratory of Biogeology and Environmental Geology, China University of Geosciences, Wuhan, China
- Laboratory of Basin Hydrology and Wetland Eco-Restoration, China University of Geosciences, Wuhan, China
| | - Xing Xiang
- State Key Laboratory of Biogeology and Environmental Geology, China University of Geosciences, Wuhan, China
| | - Ruicheng Wang
- State Key Laboratory of Biogeology and Environmental Geology, China University of Geosciences, Wuhan, China
| | - Ying Xu
- State Key Laboratory of Biogeology and Environmental Geology, China University of Geosciences, Wuhan, China
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14
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Oliveira RS, Costa FRC, van Baalen E, de Jonge A, Bittencourt PR, Almanza Y, Barros FDV, Cordoba EC, Fagundes MV, Garcia S, Guimaraes ZTM, Hertel M, Schietti J, Rodrigues-Souza J, Poorter L. Embolism resistance drives the distribution of Amazonian rainforest tree species along hydro-topographic gradients. New Phytol 2019; 221:1457-1465. [PMID: 30295938 DOI: 10.1111/nph.15463] [Citation(s) in RCA: 62] [Impact Index Per Article: 12.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/18/2018] [Accepted: 08/23/2018] [Indexed: 05/08/2023]
Abstract
Species distribution is strongly driven by local and global gradients in water availability but the underlying mechanisms are not clear. Vulnerability to xylem embolism (P50 ) is a key trait that indicates how species cope with drought and might explain plant distribution patterns across environmental gradients. Here we address its role on species sorting along a hydro-topographical gradient in a central Amazonian rainforest and examine its variance at the community scale. We measured P50 for 28 tree species, soil properties and estimated the hydrological niche of each species using an indicator of distance to the water table (HAND). We found a large hydraulic diversity, covering as much as 44% of the global angiosperm variation in P50 . We show that P50 : contributes to species segregation across a hydro-topographic gradient in the Amazon, and thus to species coexistence; is the result of repeated evolutionary adaptation within closely related taxa; is associated with species tolerance to P-poor soils, suggesting the evolution of a stress-tolerance syndrome to nutrients and drought; and is higher for trees in the valleys than uplands. The large observed hydraulic diversity and its association with topography has important implications for modelling and predicting forest and species resilience to climate change.
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Affiliation(s)
- Rafael S Oliveira
- Department of Plant Biology, Instituto de Biologia, University of Campinas, Caixa Postal 6109, CEP 13083-970, Campinas, SP, Brazil
| | - Flavia R C Costa
- Coordenação de Pesquisa em Biodiversidade, Instituto Nacional de Pesquisas da Amazônia (INPA), Caixa Postal 2223, CEP 69080-971, Manaus, Brazil
| | - Emma van Baalen
- Coordenação de Pesquisa em Biodiversidade, Instituto Nacional de Pesquisas da Amazônia (INPA), Caixa Postal 2223, CEP 69080-971, Manaus, Brazil
- Forest Ecology and Forest Management Group, Wageningen University and Research, PO Box 47, 6700 AA, Wageningen, the Netherlands
| | - Arjen de Jonge
- Coordenação de Pesquisa em Biodiversidade, Instituto Nacional de Pesquisas da Amazônia (INPA), Caixa Postal 2223, CEP 69080-971, Manaus, Brazil
- Forest Ecology and Forest Management Group, Wageningen University and Research, PO Box 47, 6700 AA, Wageningen, the Netherlands
| | - Paulo R Bittencourt
- Department of Plant Biology, Instituto de Biologia, University of Campinas, Caixa Postal 6109, CEP 13083-970, Campinas, SP, Brazil
| | - Yanina Almanza
- Instituto de Biociencias, Universidade Federal de Mato Grosso, Av. Fernando Correa, CEP 78060-900, Cuiabá, Brazil
| | - Fernanda de V Barros
- Department of Plant Biology, Instituto de Biologia, University of Campinas, Caixa Postal 6109, CEP 13083-970, Campinas, SP, Brazil
| | - Edher C Cordoba
- Coordenação de Pesquisa em Biodiversidade, Instituto Nacional de Pesquisas da Amazônia (INPA), Caixa Postal 2223, CEP 69080-971, Manaus, Brazil
| | - Marina V Fagundes
- Restoration Ecology Research Group, Department of Ecology, Universidade Federal do Rio Grande do Norte, CEP 59072970, Natal, RN, Brazil
| | - Sabrina Garcia
- Coordenação de Pesquisa em Biodiversidade, Instituto Nacional de Pesquisas da Amazônia (INPA), Caixa Postal 2223, CEP 69080-971, Manaus, Brazil
| | - Zilza T M Guimaraes
- Programa de Pós-Graduação em Ciências de Florestas Tropicais, Instituto Nacional de Pesquisas da Amazônia, CEP 69080-971, Manaus, Brazil
| | - Mariana Hertel
- Laboratório de Fisiologia Vegetal, Universidade Estadual de Londrina, Londrina, CEP 86097850, PR, Brazil
| | - Juliana Schietti
- Coordenação de Pesquisa em Biodiversidade, Instituto Nacional de Pesquisas da Amazônia (INPA), Caixa Postal 2223, CEP 69080-971, Manaus, Brazil
| | - Jefferson Rodrigues-Souza
- Coordenação de Pesquisa em Biodiversidade, Instituto Nacional de Pesquisas da Amazônia (INPA), Caixa Postal 2223, CEP 69080-971, Manaus, Brazil
| | - Lourens Poorter
- Coordenação de Pesquisa em Biodiversidade, Instituto Nacional de Pesquisas da Amazônia (INPA), Caixa Postal 2223, CEP 69080-971, Manaus, Brazil
- Forest Ecology and Forest Management Group, Wageningen University and Research, PO Box 47, 6700 AA, Wageningen, the Netherlands
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15
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van Bellen S, Magnan G, Davies L, Froese D, Mullan-Boudreau G, Zaccone C, Garneau M, Shotyk W. Testate amoeba records indicate regional 20th-century lowering of water tables in ombrotrophic peatlands in central-northern Alberta, Canada. Glob Chang Biol 2018; 24:2758-2774. [PMID: 29569789 DOI: 10.1111/gcb.14143] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/07/2017] [Revised: 02/11/2018] [Accepted: 03/07/2018] [Indexed: 06/08/2023]
Abstract
Testate amoebae are abundant in the surface layers of northern peatlands. Analysis of their fossilized shell (test) assemblages allows for reconstructions of local water-table depths (WTD). We have reconstructed WTD dynamics for five peat cores from peatlands ranging in distance from the Athabasca bituminous sands (ABS) region in western Canada. Amoeba assemblages were combined with plant macrofossil records, acid-insoluble ash (AIA) fluxes and instrumental climate data to identify drivers for environmental change. Two functional traits of testate amoebae, mixotrophy and the tendency to integrate xenogenic mineral matter in test construction, were quantified to infer possible effects of AIA flux on testate amoeba presence. Age-depth models showed the cores each covered at least the last ~315 years, with some spanning the last millennium. Testate amoeba assemblages were likely affected by permafrost development in two of the peatlands, yet the most important shift in assemblages was detected after 1960 CE. This shift represents a significant apparent lowering of water tables in four out of five cores, with a mean drop of ~15 cm. Over the last 50 years, assemblages shifted towards more xerophilous taxa, a trend which was best explained by increasing Sphagnum s. Acutifolia and, to a lesser extent, mean summer temperature. This trend was most evident in the two cores from the sites located farthest away from the ABS region. AIA flux variations did not show a clear effect on mineral-agglutinating taxa, nor on S. s. Acutifolia presence. We therefore suggest the drying trend was forced by the establishment of S. s. Acutifolia, driven by enhanced productivity following regional warming. Such recent apparent drying of peatlands, which may only be reconstructed by appropriate indicators combined with high chronological control, may affect vulnerability to future burning and promote emissions of CO2 .
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Affiliation(s)
- Simon van Bellen
- Department of Renewable Resources, University of Alberta, Edmonton, Canada
- Geotop-Université du Québec à Montréal, Montreal, Canada
| | - Gabriel Magnan
- Department of Renewable Resources, University of Alberta, Edmonton, Canada
- Geotop-Université du Québec à Montréal, Montreal, Canada
| | - Lauren Davies
- Department of Earth and Atmospheric Sciences, University of Alberta, Edmonton, Canada
| | - Duane Froese
- Department of Earth and Atmospheric Sciences, University of Alberta, Edmonton, Canada
| | | | - Claudio Zaccone
- Department of the Sciences of Agriculture, Food and Environment, University of Foggia, Foggia, Italy
| | - Michelle Garneau
- Geotop-Université du Québec à Montréal, Montreal, Canada
- Département de Géographie, Université du Québec à Montréal, Montreal, Canada
| | - William Shotyk
- Department of Renewable Resources, University of Alberta, Edmonton, Canada
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16
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Lamit LJ, Romanowicz KJ, Potvin LR, Rivers AR, Singh K, Lennon JT, Tringe SG, Kane ES, Lilleskov EA. Patterns and drivers of fungal community depth stratification in Sphagnum peat. FEMS Microbiol Ecol 2017; 93:3909725. [PMID: 28854677 DOI: 10.1093/femsec/fix082] [Citation(s) in RCA: 23] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/24/2017] [Accepted: 06/28/2017] [Indexed: 11/13/2022] Open
Abstract
Peatlands store an immense pool of soil carbon vulnerable to microbial oxidation due to drought and intentional draining. We used amplicon sequencing and quantitative PCR to (i) examine how fungi are influenced by depth in the peat profile, water table and plant functional group at the onset of a multiyear mesocosm experiment, and (ii) test if fungi are correlated with abiotic variables of peat and pore water. We hypothesized that each factor influenced fungi, but that depth would have the strongest effect early in the experiment. We found that (i) communities were strongly depth stratified; fungi were four times more abundant in the upper (10-20 cm) than the lower (30-40 cm) depth, and dominance shifted from ericoid mycorrhizal fungi to saprotrophs and endophytes with increasing depth; (ii) the influence of plant functional group was depth dependent, with Ericaceae structuring the community in the upper peat only; (iii) water table had minor influences; and (iv) communities strongly covaried with abiotic variables, including indices of peat and pore water carbon quality. Our results highlight the importance of vertical stratification to peatland fungi, and the depth dependency of plant functional group effects, which must be considered when elucidating the role of fungi in peatland carbon dynamics.
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Affiliation(s)
- Louis J Lamit
- School of Forest Resources and Environmental Science, Michigan Technological University, Houghton, MI 49931, USA
| | - Karl J Romanowicz
- School of Natural Resources & Environment, University of Michigan, Ann Arbor, MI 48109, USA
| | - Lynette R Potvin
- USDA Forest Service, Northern Research Station, Forestry Sciences Laboratory, Houghton, MI 49931, USA
| | - Adam R Rivers
- Department of Energy, Joint Genome Institute, Walnut Creek, CA 94598, USA
| | - Kanwar Singh
- Department of Energy, Joint Genome Institute, Walnut Creek, CA 94598, USA
| | - Jay T Lennon
- Department of Biology, Indiana University, Bloomington, IN 47405, USA
| | - Susannah G Tringe
- Department of Energy, Joint Genome Institute, Walnut Creek, CA 94598, USA
| | - Evan S Kane
- School of Forest Resources and Environmental Science, Michigan Technological University, Houghton, MI 49931, USA.,USDA Forest Service, Northern Research Station, Forestry Sciences Laboratory, Houghton, MI 49931, USA
| | - Erik A Lilleskov
- School of Forest Resources and Environmental Science, Michigan Technological University, Houghton, MI 49931, USA.,USDA Forest Service, Northern Research Station, Forestry Sciences Laboratory, Houghton, MI 49931, USA
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17
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Boyce CK, Fan Y, Zwieniecki MA. Did trees grow up to the light, up to the wind, or down to the water? How modern high productivity colors perception of early plant evolution. New Phytol 2017; 215:552-557. [PMID: 28054354 DOI: 10.1111/nph.14387] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/07/2016] [Accepted: 11/06/2016] [Indexed: 06/06/2023]
Abstract
Contents I. II. III. IV. V. Acknowledgements References SUMMARY: Flowering plants can be far more productive than other living land plants. Evidence is reviewed that productivity would have been uniformly lower and less CO2 -responsive before angiosperm evolution, particularly during the early evolution of vascular plants and forests in the Devonian and Carboniferous. This introduces important challenges because paleoecological interpretations have been rooted in understanding of modern angiosperm-dominated ecosystems. One key example is tree evolution: although often thought to reflect competition for light, light limitation is unlikely for plants with such low photosynthetic potential. Instead, during this early evolution, the capacities of trees for enhanced propagule dispersal, greater leaf area, and deep-rooting access to nutrients and the water table are all deemed more fundamental potential drivers than light.
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Affiliation(s)
- C Kevin Boyce
- Geological Sciences, Stanford University, Stanford, CA, 94305, USA
| | - Ying Fan
- Earth & Planetary Sciences, Rutgers University, New Brunswick, NJ, 08544, USA
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18
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Olefeldt D, Euskirchen ES, Harden J, Kane E, McGuire AD, Waldrop MP, Turetsky MR. A decade of boreal rich fen greenhouse gas fluxes in response to natural and experimental water table variability. Glob Chang Biol 2017; 23:2428-2440. [PMID: 28055128 DOI: 10.1111/gcb.13612] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/07/2016] [Revised: 11/06/2016] [Accepted: 12/07/2016] [Indexed: 06/06/2023]
Abstract
Rich fens are common boreal ecosystems with distinct hydrology, biogeochemistry and ecology that influence their carbon (C) balance. We present growing season soil chamber methane emission (FCH4 ), ecosystem respiration (ER), net ecosystem exchange (NEE) and gross primary production (GPP) fluxes from a 9-years water table manipulation experiment in an Alaskan rich fen. The study included major flood and drought years, where wetting and drying treatments further modified the severity of droughts. Results support previous findings from peatlands that drought causes reduced magnitude of growing season FCH4 , GPP and NEE, thus reducing or reversing their C sink function. Experimentally exacerbated droughts further reduced the capacity for the fen to act as a C sink by causing shifts in vegetation and thus reducing magnitude of maximum growing season GPP in subsequent flood years by ~15% compared to control plots. Conversely, water table position had only a weak influence on ER, but dominant contribution to ER switched from autotrophic respiration in wet years to heterotrophic in dry years. Droughts did not cause inter-annual lag effects on ER in this rich fen, as has been observed in several nutrient-poor peatlands. While ER was dependent on soil temperatures at 2 cm depth, FCH4 was linked to soil temperatures at 25 cm. Inter-annual variability of deep soil temperatures was in turn dependent on wetness rather than air temperature, and higher FCH4 in flooded years was thus equally due to increased methane production at depth and decreased methane oxidation near the surface. Short-term fluctuations in wetness caused significant lag effects on FCH4 , but droughts caused no inter-annual lag effects on FCH4 . Our results show that frequency and severity of droughts and floods can have characteristic effects on the exchange of greenhouse gases, and emphasize the need to project future hydrological regimes in rich fens.
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Affiliation(s)
- David Olefeldt
- Department of Integrative Biology, University of Guelph, Science Complex, Guelph, ON, N1G 2W1, Canada
- Department of Renewable Resources, University of Alberta, Edmonton, AB T6G 2H1, Canada
| | - Eugénie S Euskirchen
- Institute of Arctic Biology, University of Alaska Fairbanks, Fairbanks, AK, 99775, USA
| | | | - Evan Kane
- School of Forest Resources and Environmental Sciences, and USDA Forest Service, Michigan Tech University, Northern Research Station, Houghton, MI, 49931, USA
| | - A David McGuire
- U.S. Geological Survey, Alaska Cooperative Fish and Wildlife Research Unit, University of Alaska Fairbanks, Fairbanks, AK, 99775, USA
| | | | - Merritt R Turetsky
- Department of Integrative Biology, University of Guelph, Science Complex, Guelph, ON, N1G 2W1, Canada
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19
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Abstract
1. Human activities have been a significant driver of environmental changes with tremendous consequences for carbon dynamics. Peatlands are critical ecosystems because they store ~30% of the global soil organic carbon pool and are particularly vulnerable to anthropogenic changes. The Zoige peatland on the eastern Tibet Plateau, as the largest alpine peatland in the world, accounts for 1‰ of global peat soil organic carbon storage. However, this peatland has experienced dramatic climate change including increased temperature and reduced precipitation in the past decades, which likely is responsible for a decline of the water table and facilitated earthworm invasion, two major factors reducing soil organic carbon (SOC) storage of peatlands. 2. Because earthworms are often more active in low- than in high- moisture peatlands, we hypothesized that the simultaneous occurrence of water table decline and earthworm invasion would synergistically accelerate the release of SOC from peatland soil. We conducted a field experiment with a paired split-plot design, i.e. presence vs. absence of the invasive earthworms (Pheretima aspergillum) nested in drained vs. undrained plots, respectively, for three years within the homogenous Zoige peatland. 3. Water table decline significantly decreased soil water content and bulk density, resulting in a marked reduction of SOC storage. Moreover, consistent with our hypothesis, earthworm presence dramatically reduced SOC in the drained but not in the undrained peatland through the formation of deep burrows and decreasing bulk density of the lower soil layer over three years. The variation in SOC likely was due to changes in aboveground plant biomass, root growth, and earthworm behavior induced by the experimental treatments. 4. Synthesis and applications. We suggest that incentive measures should be taken to prevent further water table decline and earthworm invasion for maintaining the soil C pool in Zoige peatland. Artificial filling of drainage canals should be implemented to increase the water table level, facilitating the recovery of drained peatlands. Moreover, the dispersal of earthworms and their cocoons attached to the roots of crop plants and tree saplings from low-lying areas to the Zoige region should be controlled and restricted.
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Affiliation(s)
- Xinwei Wu
- Department of Ecology, College of Life Sciences, Nanjing University, Nanjing 210023, China
| | - Rui Cao
- Department of Ecology, College of Life Sciences, Nanjing University, Nanjing 210023, China
| | - Xue Wei
- Center for Ecological Studies, Chengdu Institute of Biology, 9 Section 4 Renminnan Rd, Chengdu 610041, China
| | - Xinqiang Xi
- Department of Ecology, College of Life Sciences, Nanjing University, Nanjing 210023, China
| | - Peili Shi
- Lhasa National Ecological Research Station, Key Laboratory of Ecosystem Network Observation and Modelling, Institute of Geographic Sciences and Natural Resources Research, Chinese Academy of Sciences, Beijing 100101, China
| | - Nico Eisenhauer
- German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Deutscher Platz 5e, 04103 Leipzig, Germany
- Institute of Biology, Leipzig University, Johannisallee 21, 04103 Leipzig, Germany
| | - Shucun Sun
- Department of Ecology, College of Life Sciences, Nanjing University, Nanjing 210023, China
- Center for Ecological Studies, Chengdu Institute of Biology, 9 Section 4 Renminnan Rd, Chengdu 610041, China
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20
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Dieleman CM, Branfireun BA, McLaughlin JW, Lindo Z. Climate change drives a shift in peatland ecosystem plant community: implications for ecosystem function and stability. Glob Chang Biol 2015; 21:388-95. [PMID: 24957384 DOI: 10.1111/gcb.12643] [Citation(s) in RCA: 77] [Impact Index Per Article: 8.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/17/2014] [Accepted: 05/13/2014] [Indexed: 05/03/2023]
Abstract
The composition of a peatland plant community has considerable effect on a range of ecosystem functions. Peatland plant community structure is predicted to change under future climate change, making the quantification of the direction and magnitude of this change a research priority. We subjected intact, replicated vegetated poor fen peat monoliths to elevated temperatures, increased atmospheric carbon dioxide (CO2 ), and two water table levels in a factorial design to determine the individual and synergistic effects of climate change factors on the poor fen plant community composition. We identify three indicators of a regime shift occurring in our experimental poor fen system under climate change: nonlinear decline of Sphagnum at temperatures 8 °C above ambient conditions, concomitant increases in Carex spp. at temperatures 4 °C above ambient conditions suggesting a weakening of Sphagnum feedbacks on peat accumulation, and increased variance of the plant community composition and pore water pH through time. A temperature increase of +4 °C appeared to be a threshold for increased vascular plant abundance; however the magnitude of change was species dependent. Elevated temperature combined with elevated CO2 had a synergistic effect on large graminoid species abundance, with a 15 times increase as compared to control conditions. Community analyses suggested that the balance between dominant plant species was tipped from Sphagnum to a graminoid-dominated system by the combination of climate change factors. Our findings indicate that changes in peatland plant community composition are likely under future climate change conditions, with a demonstrated shift toward a dominance of graminoid species in poor fens.
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Affiliation(s)
- Catherine M Dieleman
- Department of Biology, The University of Western Ontario, London, Ontario, N6A 5B7, Canada
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Turetsky MR, Kotowska A, Bubier J, Dise NB, Crill P, Hornibrook ERC, Minkkinen K, Moore TR, Myers-Smith IH, Nykänen H, Olefeldt D, Rinne J, Saarnio S, Shurpali N, Tuittila ES, Waddington JM, White JR, Wickland KP, Wilmking M. A synthesis of methane emissions from 71 northern, temperate, and subtropical wetlands. Glob Chang Biol 2014; 20:2183-97. [PMID: 24777536 DOI: 10.1111/gcb.12580] [Citation(s) in RCA: 106] [Impact Index Per Article: 10.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/09/2013] [Accepted: 11/20/2013] [Indexed: 05/13/2023]
Abstract
Wetlands are the largest natural source of atmospheric methane. Here, we assess controls on methane flux using a database of approximately 19 000 instantaneous measurements from 71 wetland sites located across subtropical, temperate, and northern high latitude regions. Our analyses confirm general controls on wetland methane emissions from soil temperature, water table, and vegetation, but also show that these relationships are modified depending on wetland type (bog, fen, or swamp), region (subarctic to temperate), and disturbance. Fen methane flux was more sensitive to vegetation and less sensitive to temperature than bog or swamp fluxes. The optimal water table for methane flux was consistently below the peat surface in bogs, close to the peat surface in poor fens, and above the peat surface in rich fens. However, the largest flux in bogs occurred when dry 30-day averaged antecedent conditions were followed by wet conditions, while in fens and swamps, the largest flux occurred when both 30-day averaged antecedent and current conditions were wet. Drained wetlands exhibited distinct characteristics, e.g. the absence of large flux following wet and warm conditions, suggesting that the same functional relationships between methane flux and environmental conditions cannot be used across pristine and disturbed wetlands. Together, our results suggest that water table and temperature are dominant controls on methane flux in pristine bogs and swamps, while other processes, such as vascular transport in pristine fens, have the potential to partially override the effect of these controls in other wetland types. Because wetland types vary in methane emissions and have distinct controls, these ecosystems need to be considered separately to yield reliable estimates of global wetland methane release.
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Affiliation(s)
- Merritt R Turetsky
- Department of Integrative Biology, University of Guelph, Guelph, Ontario, Canada
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Propastin P. Multisensor monitoring system for assessment of locust hazard risk in the Lake Balkhash drainage basin. Environ Manage 2012; 50:1234-46. [PMID: 22990684 PMCID: PMC3497939 DOI: 10.1007/s00267-012-9950-2] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/26/2011] [Accepted: 08/27/2012] [Indexed: 05/22/2023]
Abstract
Satellite and ground-based data were combined in a monitoring system to quantify the link between climate conditions and the risk of locust infestations in the southern part of Lake Balkhash's drainage basin in the Republic of Kazakhstan. In this monitoring system, the Normalized Difference Vegetation Index (NDVI), derived from the SPOT-VGT satellite, was used for mapping potential locust habitats and monitoring their area throughout 1998 to 2007. TOPEX/Poseidon and Jason 1 altimeter data were used to track the interannual dynamics of water level in Balkhash Lake. Climate conditions were represented by weather records for air temperature and precipitation during the same period. The classification procedure, based on an analysis of multitemporal dynamics of SPOT-VGT NDVI values observed by individual vegetation classes, generated annual areas of ten land-cover types, which were then categorized as areas with low, medium, and high risk for locust infestation. Statistical analyses showed significant influences of the climatic parameters and the Balkhash Lake hydrological regime on the spatial extend of annual areas of potential locust habitats. The results also indicate that the linkages between locust infestation risk and environmental factors are characterized by time lags. The expansion of locust risk areas are usually preceded by dry, hot years and lower water levels in Balkhash Lake when larger areas of reed grass are free from seasonal flooding. Years with such conditions are favourable for locust outbreaks due to expansion of the habitat areas suitable for locust oviposition and nymphal development. In contrast, years with higher water levels in Balkhash Lake and lower temperature decrease the potential locust habitat area.
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Glazer AN, Likens GE. The water table: the shifting foundation of life on land. Ambio 2012; 41:657-69. [PMID: 22773380 PMCID: PMC3472013 DOI: 10.1007/s13280-012-0328-8] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/04/2011] [Revised: 06/01/2012] [Accepted: 06/11/2012] [Indexed: 05/27/2023]
Abstract
Hyperarid, arid, and semi-arid lands represent over a third of the Earth's land surface, and are home to over 38 % of the increasing world population. Freshwater is a limiting resource on these lands, and withdrawal of groundwater substantially exceeds recharge. Withdrawals of groundwater for expanding agricultural and domestic use severely limit water availability for groundwater dependent ecosystems. We examine here, with emphasis on quantitative data, case histories of groundwater withdrawals at widely differing scales, on three continents, that range from the impact of a few wells, to the outcomes of total appropriation of flow in a major river system. The case histories provide a glimpse of the immense challenge of replacing groundwater resources once they are severely depleted, and put into sharp focus the question whether the magnitude of the current and future human, economic, and environmental consequences and costs of present practices of groundwater exploitation are adequately recognized.
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Affiliation(s)
- Alexander N. Glazer
- />Department of Molecular and Cell Biology, University of California, Berkeley, CA 94720-3202 USA
| | - Gene E. Likens
- />Cary Institute of Ecosystem Studies, Millbrook, NY 12545 USA
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Yu S, Ehrenfeld JG. Relationships among plants, soils and microbial communities along a hydrological gradient in the New Jersey Pinelands, USA. Ann Bot 2010; 105:185-96. [PMID: 19643908 PMCID: PMC2794054 DOI: 10.1093/aob/mcp183] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/04/2009] [Revised: 05/11/2009] [Accepted: 06/04/2009] [Indexed: 05/28/2023]
Abstract
BACKGROUND AND AIMS Understanding the role of different components of hydrology in structuring wetland communities is not well developed. A sequence of adjacent wetlands located on a catenary sequence of soils and receiving the same sources and qualities of water is used to examine specifically the role of water-table median position and variability in affecting plant and microbial community composition and soil properties. METHODS Two replicates of three types of wetland found adjacent to each other along a hydrological gradient in the New Jersey Pinelands (USA) were studied. Plant-community and water-table data were obtained within a 100-m(2) plot in each community (pine swamp, maple swamp and Atlantic-white-cedar swamp). Monthly soil samples from each plot were analysed for soil moisture, organic matter, extractable nitrogen fractions, N mineralization rate and microbial community composition. Multivariate ordination methods were used to compare patterns among sites within and between data sets. KEY RESULTS The maple and pine wetlands were more similar to each other in plant community composition, soil properties and microbial community composition than either was to the cedar swamps. However, maple and pine wetlands differed from each other in water-table descriptors as much as they differed from the cedar swamps. All microbial communities were dominated by Gram-positive bacteria despite hydrologic differences among the sites. Water-table variability was as important as water-table level in affecting microbial communities. CONCLUSIONS Water tables affect wetland communities through both median level and variability. Differentiation of both plant and microbial communities are not simple transforms of differences in water-table position, even when other hydrologic factors are kept constant. Rather, soil genesis, a result of both water-table position and geologic history, appears to be the main factor affecting plant and microbial community similarities.
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Affiliation(s)
| | - Joan G. Ehrenfeld
- Department of Ecology, Evolution, and Natural Resources, SEBS, 14 College Farm Road, Rutgers University, New Brunswick, NJ 08901, USA
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