Antibiofilm Activity of Invasive Plants against Candida albicans: Focus on Baccharis halimifolia Essential Oil and Its Compounds

The extracts of five invasive plants were investigated for antifungal and antibiofilm activities against Candida albicans, C. glabrata, C. krusei, and C. parapsilosis. The antifungal activity was evaluated using the microdilution assay and the antibiofilm effect by measurement of the metabolic activity. Ethanol and ethanol-water extracts of Reynoutria japonica leaves inhibited 50 % of planktonic cells at 250 μg mL-1 and 15.6 μg mL-1 , respectively. Ethanol and ethanol-water extracts of Baccharis halimifolia inhibited >75 % of the mature biofilm of C. albicans at 500 μg mL-1 . The essential oil (EO) of B. halimifolia leaves was the most active (50 % inhibition (IC50 ) at 4 and 74 μg mL-1 against the maturation phase and 24 h old-biofilms of C. albicans, respectively). Oxygenated sesquiterpenes were the primary contents in this EO (62.02 %), with β-caryophyllene oxide as the major component (37 %). Aromadendrene oxide-(2), β-caryophyllene oxide, and (±)-β-pinene displayed significant activities against the maturation phase (IC50 =9-310 μ mol l-1 ) and preformed 24 h-biofilm (IC50 =38-630 μ mol l-1 ) of C. albicans with very low cytotoxicity for the first two compounds. C. albicans remained the most susceptible species to this EO and its components. This study highlighted for the first time the antibiofilm potential of B. halimifolia, its EO and some of its components.

Storage and source of polycyclic aromatic hydrocarbons in sediments downstream of a major coal district in France

During the 20th century, the local economy of the Upper Loire Basin (ULB) was essentially based on industrial coal mining extraction. One of the major French coal districts with associated urban/industrial activities and numerous coking/gas plants were developed in the Ondaine-Furan subbasins, two tributaries of the upper Loire main stream. To determine the compositional assemblage, the level and the potential sources of contamination, the historical sedimentary chronicle of the 16 US EPA priority polycyclic aromatic hydrocarbons (PAHs) has been investigated. PAH concentrations were determined using gas chromatography/mass spectrometry (GC/MS) in a dated core, sampled in the Villerest flood-control reservoir located downstream of the Ondaine-Furan corridor (OFC). The most contaminated sediments were deposited prior to 1983 (Σ16PAHs ca. 4429-13,348 ng/g) and during flood events (Σ16PAHs ca. 6380 ng/g - 1996 flood; 5360 ng/g - 2003 flood; 6075 ng/g - 2008 flood), especially in medium and high molecular weight PAHs. Among them, typical pyrogenic PAHs such as FLT, PYR, BbF and BaP were prevalent in most of the core samples. In addition, some PAHs last decade data is available from the Loire Bretagne Water Agency and were analyzed using high-performance liquid chromatography with postcolumn fluorescence derivatization (HPLC/FLD). These results confirm that the most highly contaminated sediments were found downstream of OFC (Σ16PAHs ca. 2264-7460 ng/g). According to the observed molecular distribution, PAHs are originated largely from high-temperature pyrolytic processes. Major sources of pyrogenic PAHs have been emphasized by calculation of specific ratios and by comparison to reported data. Atmospheric deposition of urban and industrial areas, wood combustion and degraded coal tar derived from former factories of coking/gas plants seem to be the major pyrogenic sources. Specifically, particular solid transport conditions that can occur during major flood events lead us to emphasize weathering of former contamination sources, such as more preserved coal tar.

Mineralogy and metals speciation in Mo rich mineral sludges generated at a metal recycling plant

In France, more than 250 million metric tons of sludges need to be treated each year. These sludges are either dumped on the landfills or reused as secondary resources in order to preserve natural resources. A large portions of these sludges are mineral sludges, originating from metal recycling plants. In order to estimate their metal recovery potential, these mineral sludges were characterized. Four types of mineral sludge samples were collected from a metal recycling plant (3 from the recycling plant storage areas (bulk storage, barrel storage and storage shed) and 1 from the collection basin). The sludges were characterized, wherein the Mo, Ni, Cr, Co, Zn and W content and speciation were quantified. The samples had pH values between 5.9 and 10.3 with organic matter contents varying between 6.3% (storage shed) and 29.5% (bulk storage) (loss on ignition at 500 °C). Based on their leaching properties, the four mineral sludge samples (in the case of Mo) and the bulk storage sludge (in the case of Ni and Zn) were classified as potentially hazardous regarding the EN 12457-1 and EN 12457-2 method. Mineralogical results reveal that both bulk storage and the storage shed give the highest contributions to the metal content of the collection basin sample. Sequential extraction of the collection basin samples indicated that Mo is bound to the oxidizable and residual fraction, while Ni, Cr and Co were bound to the residual fraction, and Zn to the soluble acid fraction, respectively. W tends to be equally distributed among all extracted fractions. A strong correlation existed between Mo and Co, as well as between Ni, Zn and Cr, respectively.

Investigation on the iron-uptake by natural biofilms

Biofilms are natural communities of microorganisms living in aquatic ecosystems which play an important role in the biogeochemistry of many inorganic elements, including iron. The present work aimed to study the uptake of iron by natural river biofilms (produced in the laboratory) and to examine the relationships between biofilms and iron in water. For that, biofilms were formed from natural water samples collected at different times of the year. Total content and global localization of iron were determined by a combination of chemical analyses and microscopy, which indicated that iron was systematically distributed throughout the biofilm matrix. Depending on the level of iron uptake, iron was diffuse or present as hot spots, was primarily localized to the fraction ascribed to OM compounds (45-60%) or the residual fraction (∼14-40%). Additional experiments were conducted using iron-organic complexes with different affinities (log K) to study iron uptake according to the speciation. These experiments suggested the association between iron and organic ligands (i.e. depending on the affinity constant) influenced the uptake of iron, but did not control the biofilm affinity for iron, which appeared to be controlled by chemical-kinetic laws.

Impact of historical mining assessed in soils by kinetic extraction and lead isotopic ratios

The aim of this study is to estimate the long-term behaviour of trace metals, in two soils differently impacted by past mining. Topsoils from two 1 km(2) zones in the forested Morvan massif (France) were sampled to assess the spatial distribution of Cd, Cu, Pb and Zn. The first zone had been contaminated by historical mining. As expected, it exhibits higher trace-metal levels and greater spatial heterogeneity than the second non-contaminated zone, supposed to represent the local background. One soil profile from each zone was investigated in detail to estimate metal behaviour, and hence, bioavailability. Kinetic extractions were performed using EDTA on three samples: the A horizon from both soil profiles and the B horizon from the contaminated soil. For all three samples, kinetic extractions can be modelled by two first-order reactions. Similar kinetic behaviour was observed for all metals, but more metal was extracted from the contaminated A horizon than from the B horizon. More surprising is the general predominance of the residual fraction over the "labile" and "less labile" pools. Past anthropogenic inputs may have percolated over time through the soil profiles because of acidic pH conditions. Stable organo-metallic complexes may also have been formed over time, reducing metal availability. These processes are not mutually exclusive. After kinetic extraction, the lead isotopic compositions of the samples exhibited different signatures, related to contamination history and intrinsic soil parameters. However, no variation in lead signature was observed during the extraction experiment, demonstrating that the "labile" and "less labile" lead pools do not differ in terms of origin. Even if trace metals resulting from past mining and metallurgy persist in soils long after these activities have ceased, kinetic extractions suggest that metals, at least for these particular forest soils, do not represent a threat for biota.

Interaction of erythromycin ethylsuccinate and acetaminophen with protein fraction of extracellular polymeric substances (EPS) from various bacterial aggregates

Extracellular polymeric substances (EPS) are, along with microbial cells, the main components of the biological sludges used in wastewater treatment and natural biofilms. EPS play a major role in removing pollutants from water by means of sorption. The ability of soluble EPS (S-EPS) and bound EPS (B-EPS) derived from various bacterial aggregates (flocs, granules, biofilms) to bind at pH 7.0 ± 0.1 to two pharmaceutical substances, acetaminophen (ACE) and erythromycin ethylsuccinate (ERY), has been investigated using the fluorescence quenching method. Two intense fluorescence peaks, A (Ex/Em range, 200-250/275-380 nm) and B (Ex/Em range, 260-320/275-360 nm), corresponding respectively to the aromatic protein region and soluble microbial by-product-like region, were identified in a three-dimensional excitation-emission matrix of EPS samples. The fluorescence peak, which corresponds to humic-like substances, was also identified though at low intensity. The ability of EPS to bind ACE was found to exceed that for ERY. The aromatic protein fraction of EPS displays a slightly higher affinity for drugs than that shown by the soluble microbial by-product-like fraction. The S-EPS and B-EPS present the same affinity for ACE and ERY. The effective quenching constants (log K) derived from the Stern-Volmer Equation equaled at peak A (with S-EPS): 3.7 ± 0.2 to 4.0 ± 0.1 for ACE and 2.1 ± 0.3 to 2.7 ± 0.1 for ERY. With B-EPS, these values were 3.9 ± 0.1 to 4.0 ± 0.1 for ACE and 2.0 ± 0.2 to 2.6 ± 0.1 for ERY. Our results suggest that the weaker EPS affinity for ERY than for ACE serves to partially explain why only about 50-80 % of ERY is removed from wastewater at the treatment plant. Moreover, this work demonstrates that EPS from natural river biofilms are able to bind drugs, which in turn may limit the mobility of drugs in natural waters.

Impact of effluent organic matter on low-pressure membrane fouling in tertiary treatment

This study aims at comparing low-pressure membrane fouling obtained with two different secondary effluents at bench and pilot-scale based on the determination of two fouling indices: the total fouling index (TFI) and the hydraulically irreversible fouling index (HIFI). The main objective was to investigate if simpler and less costly bench-scale experimentation can substitute for pilot-scale trials when assessing the fouling potential of secondary effluent in large scale membrane filtration plants producing recycled water. Absolute values for specific flux and total fouling index for the bench-scale system were higher than those determined from pilot-scale, nevertheless a statistically significant correlation (r(2) = 0.63, α = 0.1) was obtained for the total fouling index at both scales. On the contrary no such correlation was found for the hydraulically irreversible fouling index. Advanced water characterization tools such as excitation-emission matrix fluorescence spectroscopy (EEM) and liquid chromatography with organic carbon detection (LC-OCD) were used for the characterization of foulants. On the basis of statistical analysis, biopolymers and humic substances were found to be the major contribution to total fouling (r(2) = 0.95 and r(2) = 0.88, respectively). Adsorption of the low molecular weight neutral compounds to the membrane was attributed to hydraulically irreversible fouling (r(2) = 0.67).

Understanding the fouling of UF/MF hollow fibres of biologically treated wastewaters using advanced EfOM characterization and statistical tools

Five secondary effluents and a river water source were characterized using size exclusion chromatography (LC-OCD-UVD-OND) and emission-excitation matrix (EEM) fluorescence spectroscopy in order to identify the major effluent organic matter (EfOM) fractions responsible for membrane fouling. This study showed the feasibility of coupling fluorescence EEM and LC-OCD-UVD-OND to investigate the fouling potential as well as a means to differentiate natural organic matter (NOM) from EfOM. The secondary effluents and river water showed a significant difference in organic matter characteristics and fouling potential, highlighting the importance of biological processes and the feed water source on EfOM characteristics and fouling potential. On the basis of statistical analysis, protein-like substances were found to be highly correlated to the fouling potential of secondary effluents.

High pressure membrane foulants of seawater, brackish water and river water: origin assessed by sugar and bacteriohopanepolyol signatures

The present work aimed to study the origin of foulant material recovered on membranes used in water treatment. Firstly, sugar signatures were assessed from the monosaccharide composition. As results were not conclusive, a statistical approach using discriminant analysis was applied to the sugar data set in order to predict the origin of the foulant material. Three groups of various origins (algal, microbial, continental dissolved organic matter) were used as sugar references for the prediction. The results of the computation showed that the origin of reverse osmosis (RO) seawater foulant material is influenced by both the location of the water sources and the season. RO brackish water and nanofiltration river water foulant materials had a terrestrial origin. Secondly, bacteriohopanepolyol signatures indicated that RO seawater foulant material had a marine signature, RO brackish water foulant material had both a marine and a terrestrial origin and the nanofiltration river water foulant material contained only a terrestrial signature.

Fatty acid composition modulates sensitivity of Legionella pneumophila to warnericin RK, an antimicrobial peptide

Warnericin RK is an antimicrobial peptide, produced by a Staphyloccocus warneri strain, described to be specifically active against Legionella, the pathogenic bacteria responsible for Legionnaires' disease. Warnericin RK is an amphiphilic alpha-helical peptide, which possesses a detergent-like mode of action. Two others peptides, δ-hemolysin I and II, produced by the same S. warneri strain, are highly similar to S. aureus δ-hemolysin and also display anti-Legionella activity. It has been recently reported that S. aureus δ-hemolysin activity on vesicles is likewise related to phospholipid acyl-chain structure, such as chain length and saturation. As staphylococcal δ-hemolysins were highly similar, we thus hypothesized that fatty acid composition of Legionella's membrane might influence the sensitivity of the bacteria to warnericin RK. Relationship between sensitivity to the peptide and fatty acid composition was then followed in various conditions. Cells in stationary phase, which were already described as less resistant than cells in exponential phase, displayed higher amounts of branched-chain fatty acids (BCFA) and short chain fatty acids. An adapted strain, able to grow at a concentration 33 fold higher than minimal inhibitory concentration of the wild type (i.e. 1μM), was isolated after repeated transfers of L. pneumophila in the presence of increased concentrations of warnericin RK. The amount of BCFA was significantly higher in the adapted strain than in the wild type strain. Also, a transcriptomic analysis of the wild type and adapted strains showed that two genes involved in fatty acid biosynthesis were repressed in the adapted strain. These genes encode enzymes involved in desaturation and elongation of fatty acids respectively. Their repression was in agreement with the decrease of unsaturated fatty acids and fatty acid chain length in the adapted strain. Conclusively, our results indicate that the increase of BCFA and the decrease of fatty acid chain length in membrane were correlated with the increase in resistance to warnericin RK. Therefore, fatty acid profile seems to play a critical role in the sensitivity of L. pneumophila to warnericin RK.

Study of organic matter during coagulation and electrocoagulation processes: application to a stabilized landfill leachate

Organic matter contained in leachates appears to be a relevant indicator of waste evolution. Among the physico-chemical treatments applied to stabilize leachates, coagulation-flocculation is considered a classical process and electrocoagulation can be developed. Electrocoagulation tests were carried out in a laboratory pilot using aluminium plates and compared to classical coagulation-flocculation with aluminium ions and to electrolysis alone. The leachate used in this study came from the landfill of Crezin (Limoges, France) and it presented low biodegradability and high concentration of macromolecules. To assess the efficiency of the chemical and electrochemical processes, we specifically studied Organic Matter (OM) by using two protocols: adsorption on XAD resins and fractionation by ultrafiltration. Biodegradable Dissolved Organic Carbon (BDOC) measurements were applied to the fractions extracted by XAD resins and were also used as an indicator of the efficiency of the treatments. Residual organic matter concentration was the same for the two processes but its composition appeared different after electrocoagulation: a higher percentage of small hydrophilic organic molecules which seemed to be less biodegradable than the initial organic matter was observed.

Modeling of 137Cs migration in soils using an 80-year soil archive: role of fertilizers and agricultural amendments

An 80-year soil archive, the 42-plot experimental design at the INRA in Versailles (France), is used here to study long-term contamination by 137Cs atmospheric deposition and the fate of this radioisotope when associated with various agricultural practices: fallow land, KCl, NH4(NO3), superphosphate fertilizers, horse manure and lime amendments. The pertinence of a simple box model, where radiocaesium is supposed to move downward by convectional mechanisms, is checked using samples from control plots which had been neither amended, nor cultivated since 1928. This simple model presents the advantage of depending on only two parameters: alpha, a proportional factor allowing the historical atmospheric 137Cs fluxes to be reconstructed locally, and k, an annual loss coefficient from the plow horizon. Another pseudo-unknown is however necessary to run the model: the shape of historical 137Cs deposition, but this function can be easily computed by merging several curves previously established by other surveys. A loss of approximately 1.5% per year from the plow horizon, combined with appropriate fluxes, provides good concordance between simulated and measured values. In the 0-25cm horizon, the residence half time is found to be approximately 18yr (including both migration and radioactive decay). Migration rate constants are also calculated for some plots receiving continuous long-term agricultural treatments. Comparison with the control plots reveals significant influence of amendments on 137Cs mobility in these soils developed from a unique genoform.

Anthropogenic lead distribution in soils under arable land and permanent grassland estimated by Pb isotopic compositions

The role of land use on fate of metals in soils is poorly understood. In this work, we studied the incorporation of lead in two neighboring soils with comparable pedogenesis but under long-term different agricultural management. Distributions of anthropogenic Pb were assessed from concentrations and isotopic compositions determined on bulk horizon samples, systematical 5-10 cm increment samples, and on 24-h EDTA extracts. Minor amounts of anthropogenic lead were detected until 1-m depth under permanent grassland, linked to high earthworm activity. In arable land, exogenous Pb predominantly accumulated at depths < 60 cm. Although the proximity between the two sites ensured comparable exposition regarding atmospheric Pb deposition, the isotopic compositions clearly showed the influence of an unidentified component for the cultivated soil. This work highlights the need for exhaustive information on historical human activities in such anthropized agrosystems when fate of metal pollution is considered.

Molecular Shape Descriptors. 1. Three-Dimensional Molecular Shape Descriptor

The paper presents and illustrates a method which uses numerical integration of the van der Waals envelope(s) to calculate with desired accuracy the molecular van der Waals volume and the three-dimensional molecular shape descriptor defined as the twin-number [OV(α, β); NOV(β, α), where OV and NOV represent the overlapping and, respectively, the nonoverlapping van der Waals volumes of the molecules α and ß superimposed according to appropriate criteria.

Molecular Shape Descriptors. 3. Steric Mapping of Biological Receptor

The paper presents and illustrates and improved version of the SIBIS algorithm. SIBIS is a self-consistent type algorithm which is well suited to delineate the main steric features of biological receptor, identify missing relevant atoms and/or presence of superfluous atoms in the molecules studied, and to provide an approximate estimate for the receptor bulk tolerance. SIBIS calculations for a set of substituted benzoates in the anti-p-(p'-azophenylazo)benzoate system yield an excellent QSAR (n = 18, r = 0.989, s = 0.192, F= 20S.16) which is further supported by the information correlation coefficients, R (/?'s express quantitatively the pairwise degree of the molecular shape relatedness); the optimal receptor steric map is in agreement with experimental evidences.