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Cosse M, Rehders T, Eirich J, Finkemeier I, Selinski J. Cysteine oxidation as a regulatory mechanism of Arabidopsis plastidial NAD-dependent malate dehydrogenase. Physiol Plant 2024; 176:e14340. [PMID: 38741259 DOI: 10.1111/ppl.14340] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/06/2024] [Revised: 04/16/2024] [Accepted: 04/23/2024] [Indexed: 05/16/2024]
Abstract
Malate dehydrogenases (MDHs) catalyze a reversible NAD(P)-dependent-oxidoreductase reaction that plays an important role in central metabolism and redox homeostasis of plant cells. Recent studies suggest a moonlighting function of plastidial NAD-dependent MDH (plNAD-MDH; EC 1.1.1.37) in plastid biogenesis, independent of its enzyme activity. In this study, redox effects on activity and conformation of recombinant plNAD-MDH from Arabidopsis thaliana were investigated. We show that reduced plNAD-MDH is active while it is inhibited upon oxidation. Interestingly, the presence of its cofactors NAD+ and NADH could prevent oxidative inhibition of plNAD-MDH. In addition, a conformational change upon oxidation could be observed via non-reducing SDS-PAGE. Both effects, its inhibition and conformational change, were reversible by re-reduction. Further investigation of single cysteine substitutions and mass spectrometry revealed that oxidation of plNAD-MDH leads to oxidation of all four cysteine residues. However, cysteine oxidation of C129 leads to inhibition of plNAD-MDH activity and oxidation of C147 induces its conformational change. In contrast, oxidation of C190 and C333 does not affect plNAD-MDH activity or structure. Our results demonstrate that plNAD-MDH activity can be reversibly inhibited, but not inactivated, by cysteine oxidation and might be co-regulated by the availability of its cofactors in vivo.
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Affiliation(s)
- Maike Cosse
- Plant Cell Biology, Botanical Institute, Christian-Albrechts University, Kiel, Germany
| | - Tanja Rehders
- Plant Cell Biology, Botanical Institute, Christian-Albrechts University, Kiel, Germany
| | - Jürgen Eirich
- Plant Physiology, Institute of Plant Biology and Biotechnology, University of Muenster, Muenster, Germany
| | - Iris Finkemeier
- Plant Physiology, Institute of Plant Biology and Biotechnology, University of Muenster, Muenster, Germany
| | - Jennifer Selinski
- Plant Cell Biology, Botanical Institute, Christian-Albrechts University, Kiel, Germany
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2
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Timm S, Klaas N, Niemann J, Jahnke K, Alseekh S, Zhang Y, Souza PVL, Hou LY, Cosse M, Selinski J, Geigenberger P, Daloso DM, Fernie AR, Hagemann M. Thioredoxins o1 and h2 jointly adjust mitochondrial dihydrolipoamide dehydrogenase-dependent pathways towards changing environments. Plant Cell Environ 2024. [PMID: 38518065 DOI: 10.1111/pce.14899] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/29/2023] [Revised: 03/11/2024] [Accepted: 03/13/2024] [Indexed: 03/24/2024]
Abstract
Thioredoxins (TRXs) are central to redox regulation, modulating enzyme activities to adapt metabolism to environmental changes. Previous research emphasized mitochondrial and microsomal TRX o1 and h2 influence on mitochondrial metabolism, including photorespiration and the tricarboxylic acid (TCA) cycle. Our study aimed to compare TRX-based regulation circuits towards environmental cues mainly affecting photorespiration. Metabolite snapshots, phenotypes and CO2 assimilation were compared among single and multiple TRX mutants in the wild-type and the glycine decarboxylase T-protein knockdown (gldt1) background. Our analyses provided evidence for additive negative effects of combined TRX o1 and h2 deficiency on growth and photosynthesis. Especially metabolite accumulation patterns suggest a shared regulation mechanism mainly on mitochondrial dihydrolipoamide dehydrogenase (mtLPD1)-dependent pathways. Quantification of pyridine nucleotides, in conjunction with 13C-labelling approaches, and biochemical analysis of recombinant mtLPD1 supported this. It also revealed mtLPD1 inhibition by NADH, pointing at an additional measure to fine-tune it's activity. Collectively, we propose that lack of TRX o1 and h2 perturbs the mitochondrial redox state, which impacts on other pathways through shifts in the NADH/NAD+ ratio via mtLPD1. This regulation module might represent a node for simultaneous adjustments of photorespiration, the TCA cycle and branched chain amino acid degradation under fluctuating environmental conditions.
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Affiliation(s)
- Stefan Timm
- Plant Physiology Department, University of Rostock, Rostock, Germany
| | - Nicole Klaas
- Plant Physiology Department, University of Rostock, Rostock, Germany
| | - Janice Niemann
- Plant Physiology Department, University of Rostock, Rostock, Germany
| | - Kathrin Jahnke
- Plant Physiology Department, University of Rostock, Rostock, Germany
| | - Saleh Alseekh
- Max Planck Institute of Molecular Plant Physiology, Golm, Germany
| | - Youjun Zhang
- Max Planck Institute of Molecular Plant Physiology, Golm, Germany
- Center of Plant System Biology and Biotechnology, Plovdiv, Bulgaria
| | - Paulo V L Souza
- LabPlant, Departamento de Bioquímica e Biologia Molecular, Universidade Federal do Ceará, Fortaleza, Brazil
| | - Liang-Yu Hou
- Department Biology I, Ludwig-Maximilians-University Munich, Planegg-Martinsried, Germany
- Institute of Plant and Microbial Biology, Academia Sinica, Taipei, Taiwan
| | - Maike Cosse
- Department of Plant Cell Biology, Botanical Institute, Christian-Albrechts University Kiel, Kiel, Germany
| | - Jennifer Selinski
- Department of Plant Cell Biology, Botanical Institute, Christian-Albrechts University Kiel, Kiel, Germany
| | - Peter Geigenberger
- Department Biology I, Ludwig-Maximilians-University Munich, Planegg-Martinsried, Germany
| | - Danilo M Daloso
- LabPlant, Departamento de Bioquímica e Biologia Molecular, Universidade Federal do Ceará, Fortaleza, Brazil
| | - Alisdair R Fernie
- Max Planck Institute of Molecular Plant Physiology, Golm, Germany
- Center of Plant System Biology and Biotechnology, Plovdiv, Bulgaria
| | - Martin Hagemann
- Plant Physiology Department, University of Rostock, Rostock, Germany
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3
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Saeid Nia M, Scholz L, Garibay-Hernández A, Mock HP, Repnik U, Selinski J, Krupinska K, Bilger W. How do barley plants with impaired photosynthetic light acclimation survive under high-light stress? Planta 2023; 258:71. [PMID: 37632541 PMCID: PMC10460368 DOI: 10.1007/s00425-023-04227-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/01/2023] [Accepted: 08/13/2023] [Indexed: 08/28/2023]
Abstract
MAIN CONCLUSION WHIRLY1 deficient barley plants surviving growth at high irradiance displayed increased non-radiative energy dissipation, enhanced contents of zeaxanthin and the flavonoid lutonarin, but no changes in α-tocopherol nor glutathione. Plants are able to acclimate to environmental conditions to optimize their functions. With the exception of obligate shade plants, they can adjust their photosynthetic apparatus and the morphology and anatomy of their leaves to irradiance. Barley (Hordeum vulgare L., cv. Golden Promise) plants with reduced abundance of the protein WHIRLY1 were recently shown to be unable to acclimatise important components of the photosynthetic apparatus to high light. Nevertheless, these plants did not show symptoms of photoinhibition. High-light (HL) grown WHIRLY1 knockdown plants showed clear signs of exposure to excessive irradiance such as a low epoxidation state of the violaxanthin cycle pigments and an early light saturation of electron transport. These responses were underlined by a very large xanthophyll cycle pool size and by an increased number of plastoglobules. Whereas zeaxanthin increased with HL stress, α-tocopherol, which is another lipophilic antioxidant, showed no response to excessive light. Also the content of the hydrophilic antioxidant glutathione showed no increase in W1 plants as compared to the wild type, whereas the flavone lutonarin was induced in W1 plants. HPLC analysis of removed epidermal tissue indicated that the largest part of lutonarin was presumably located in the mesophyll. Since lutonarin is a better antioxidant than saponarin, the major flavone present in barley leaves, it is concluded that lutonarin accumulated as a response to oxidative stress. It is also concluded that zeaxanthin and lutonarin may have served as antioxidants in the WHIRLY1 knockdown plants, contributing to their survival in HL despite their restricted HL acclimation.
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Affiliation(s)
| | - Louis Scholz
- Institute of Botany, Christian-Albrechts-University, Kiel, Germany
| | - Adriana Garibay-Hernández
- Leibniz Institute for Plant Genetics and Crop Plant Research, Gatersleben, Seeland, Germany
- Molecular Biotechnology and Systems Biology, TU Kaiserslautern, Paul-Ehrlich Straße 23, 67663, Kaiserslautern, Germany
| | - Hans-Peter Mock
- Leibniz Institute for Plant Genetics and Crop Plant Research, Gatersleben, Seeland, Germany
| | - Urska Repnik
- Central Microscopy, Department of Biology, Christian-Albrechts-University, Kiel, Germany
| | | | - Karin Krupinska
- Institute of Botany, Christian-Albrechts-University, Kiel, Germany
| | - Wolfgang Bilger
- Institute of Botany, Christian-Albrechts-University, Kiel, Germany.
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4
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Sweetman C, Selinski J, Miller TK, Whelan J, Day DA. Legume Alternative Oxidase Isoforms Show Differential Sensitivity to Pyruvate Activation. Front Plant Sci 2022; 12:813691. [PMID: 35111186 PMCID: PMC8801435 DOI: 10.3389/fpls.2021.813691] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/12/2021] [Accepted: 12/27/2021] [Indexed: 05/29/2023]
Abstract
Alternative oxidase (AOX) is an important component of the plant respiratory pathway, enabling a route for electrons that bypasses the energy-conserving, ROS-producing complexes of the mitochondrial electron transport chain. Plants contain numerous isoforms of AOX, classified as either AOX1 or AOX2. AOX1 isoforms have received the most attention due to their importance in stress responses across a wide range of species. However, the propensity for at least one isoform of AOX2 to accumulate to very high levels in photosynthetic tissues of all legumes studied to date, suggests that this isoform has specialized roles, but we know little of its properties. Previous studies with sub-mitochondrial particles of soybean cotyledons and roots indicated that differential expression of GmAOX1, GmAOX2A, and GmAOX2D across tissues might confer different activation kinetics with pyruvate. We have investigated this using recombinantly expressed isoforms of soybean AOX in a previously described bacterial system (Selinski et al., 2016, Physiologia Plantarum 157, 264-279). Pyruvate activation kinetics were similar between the two GmAOX2 isoforms but differed substantially from those of GmAOX1, suggesting that selective expression of AOX1 and 2 could determine the level of AOX activity. However, this alone cannot completely explain the differences seen in sub-mitochondrial particles isolated from different legume tissues and possible reasons for this are discussed.
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Affiliation(s)
- Crystal Sweetman
- College of Science and Engineering, Flinders University, Bedford Park, SA, Australia
| | - Jennifer Selinski
- Department of Plant Cell Biology, Botanical Institute, Christian-Albrecht University of Kiel, Kiel, Germany
| | - Troy K. Miller
- College of Science and Engineering, Flinders University, Bedford Park, SA, Australia
| | - James Whelan
- Department of Animal, Plant, and Soil Science, School of Soil Science, La Trobe University, Bundoora, VIC, Australia
| | - David A. Day
- College of Science and Engineering, Flinders University, Bedford Park, SA, Australia
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5
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Jethva J, Schmidt RR, Sauter M, Selinski J. Try or Die: Dynamics of Plant Respiration and How to Survive Low Oxygen Conditions. Plants (Basel) 2022; 11:plants11020205. [PMID: 35050092 PMCID: PMC8780655 DOI: 10.3390/plants11020205] [Citation(s) in RCA: 15] [Impact Index Per Article: 7.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/16/2021] [Revised: 01/07/2022] [Accepted: 01/11/2022] [Indexed: 05/09/2023]
Abstract
Fluctuations in oxygen (O2) availability occur as a result of flooding, which is periodically encountered by terrestrial plants. Plant respiration and mitochondrial energy generation rely on O2 availability. Therefore, decreased O2 concentrations severely affect mitochondrial function. Low O2 concentrations (hypoxia) induce cellular stress due to decreased ATP production, depletion of energy reserves and accumulation of metabolic intermediates. In addition, the transition from low to high O2 in combination with light changes-as experienced during re-oxygenation-leads to the excess formation of reactive oxygen species (ROS). In this review, we will update our current knowledge about the mechanisms enabling plants to adapt to low-O2 environments, and how to survive re-oxygenation. New insights into the role of mitochondrial retrograde signaling, chromatin modification, as well as moonlighting proteins and mitochondrial alternative electron transport pathways (and their contribution to low O2 tolerance and survival of re-oxygenation), are presented.
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Affiliation(s)
- Jay Jethva
- Department of Plant Developmental Biology and Plant Physiology, Faculty of Mathematics and Natural Sciences, Botanical Institute, Christian-Albrechts University, D-24118 Kiel, Germany; (J.J.); (M.S.)
| | - Romy R. Schmidt
- Department of Plant Biotechnology, Faculty of Biology, University of Bielefeld, D-33615 Bielefeld, Germany;
| | - Margret Sauter
- Department of Plant Developmental Biology and Plant Physiology, Faculty of Mathematics and Natural Sciences, Botanical Institute, Christian-Albrechts University, D-24118 Kiel, Germany; (J.J.); (M.S.)
| | - Jennifer Selinski
- Department of Plant Cell Biology, Botanical Institute, Faculty of Mathematics and Natural Sciences, Christian-Albrechts University, D-24118 Kiel, Germany
- Correspondence: ; Tel.: +49-(0)431-880-4245
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6
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Abstract
Significance: The importance of oxidoreductases in energy metabolism together with the occurrence of enzymes of central metabolism in the nucleus gave rise to the active research field aiming to understand moonlighting enzymes that undergo post-translational modifications (PTMs) before carrying out new tasks. Recent Advances: Cytosolic enzymes were shown to induce gene transcription after PTM and concomitant translocation to the nucleus. Changed properties of the oxidized forms of cytosolic glyceraldehyde 3-phosphate dehydrogenase, and also malate dehydrogenases and others, are the basis for a hypothesis suggesting moonlighting functions that directly link energy metabolism to adaptive responses required for maintenance of redox-homeostasis in all eukaryotes. Critical Issues: Small molecules, such as metabolic intermediates, coenzymes, or reduced glutathione, were shown to fine-tune the redox switches, interlinking redox state, metabolism, and induction of new functions via nuclear gene expression. The cytosol with its metabolic enzymes connecting energy fluxes between the various cell compartments can be seen as a hub for redox signaling, integrating the different signals for graded and directed responses in stressful situations. Future Directions: Enzymes of central metabolism were shown to interact with p53 or the assumed plant homologue suppressor of gamma response 1 (SOG1), an NAM, ATAF, and CUC transcription factor involved in the stress response upon ultraviolet exposure. Metabolic enzymes serve as sensors for imbalances, their inhibition leading to changed energy metabolism, and the adoption of transcriptional coactivator activities. Depending on the intensity of the impact, rerouting of energy metabolism, proliferation, DNA repair, cell cycle arrest, immune responses, or cell death will be induced. Antioxid. Redox Signal. 34, 1025-1047.
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Affiliation(s)
- Jennifer Selinski
- Department of Biochemistry and Physiology of Plants, Faculty of Biology, Bielefeld University, Bielefeld, Germany
| | - Renate Scheibe
- Department of Plant Physiology, Faculty of Biology/Chemistry, Osnabrueck University, Osnabrueck, Germany
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7
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Neuffer B, Schorsch M, Hameister S, Knuesting J, Selinski J, Scheibe R. Physiological and anatomical differentiation of two sympatric weed populations. PeerJ 2020; 8:e9226. [PMID: 32587795 PMCID: PMC7301897 DOI: 10.7717/peerj.9226] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/07/2019] [Accepted: 04/30/2020] [Indexed: 11/20/2022] Open
Abstract
In the vineyards of Rhineland-Palatinate (Germany), two different types of Shepherd’s Purse (Capsella bursa-pastoris) coexist: (1) the common type called ‘wild type’, and (2) the decandric type called Capsella apetala or ‘Spe’ with four stamens in place of the four petals. In this study, we compare the anatomical and physiological characters of rosette leaves of the respective types. Progeny of individual plants was cultivated in growth chambers under low- and high-light conditions. Under low-light conditions, the stomata densities of the adaxial and abaxial epidermis did not differ between the two types. When grown under high-light conditions, wild type and Spe, both exhibited increased stomata densities compared to low-light conditions, but Spe to a lesser extent than the wild type. The maximal photosynthetic capacity of Spe was lower in both, low-light and high-light conditions compared to wild-type plants. Under all CO2 concentrations, Spe seemed to be less productive. The less effective CO2 assimilation of the Spe mutant C. apetala was accompanied by later flowering. This fact prolonged the vegetative phase of Spe by about two weeks and was sufficient for the maintenance of both populations stably over years.
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Affiliation(s)
- Barbara Neuffer
- Department of Botany, University of Osnabrück, Osnabrück, Germany
| | - Michael Schorsch
- School of Biological and Chemical Sciences, Queen Mary University of London, London, United Kingdom
| | - Steffen Hameister
- Institute of Botany, University of Natural Resources and Applied Life Sciences, Vienna, Austria
| | - Johannes Knuesting
- Department of Plant Physiology, University of Osnabrück, Osnabrück, Germany
| | - Jennifer Selinski
- Department of Biochemistry & Physiology of Plants, Bielefeld University, Bielefeld, Germany
| | - Renate Scheibe
- Department of Plant Physiology, University of Osnabrück, Osnabrück, Germany
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Abstract
Retrograde signalling refers to the regulation of nuclear gene expression in response to functional changes in organelles. In plants, the two energy-converting organelles, mitochondria and chloroplasts, are tightly coordinated to balance their activities. Although our understanding of components involved in retrograde signalling has greatly increased in the last decade, studies on the regulation of the two organelle signalling pathways have been largely independent. Thus, the mechanism of how mitochondrial and chloroplastic retrograde signals are integrated is largely unknown. Here, we summarize recent findings on the function of mitochondrial signalling components and their links to chloroplast retrograde responses. From this, a picture emerges showing that the major regulators are integrators of both organellar retrograde signalling pathways. This article is part of the theme issue 'Retrograde signalling from endosymbiotic organelles'.
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Affiliation(s)
- Yan Wang
- Department of Animal, Plant and Soil Sciences, Australian Research Council Centre of Excellence in Plant Energy Biology, School of Life Sciences, La Trobe University, Bundoora, Victoria, Australia
| | - Jennifer Selinski
- Department of Animal, Plant and Soil Sciences, Australian Research Council Centre of Excellence in Plant Energy Biology, School of Life Sciences, La Trobe University, Bundoora, Victoria, Australia
| | - Chunli Mao
- Department of Animal, Plant and Soil Sciences, Australian Research Council Centre of Excellence in Plant Energy Biology, School of Life Sciences, La Trobe University, Bundoora, Victoria, Australia.,Department of Animal Science and Technology, Grassland Science, China Agricultural University, Beijing 100193, People's Republic of China
| | - Yanqiao Zhu
- Department of Animal, Plant and Soil Sciences, Australian Research Council Centre of Excellence in Plant Energy Biology, School of Life Sciences, La Trobe University, Bundoora, Victoria, Australia.,Department of Animal Science and Technology, Grassland Science, China Agricultural University, Beijing 100193, People's Republic of China
| | - Oliver Berkowitz
- Department of Animal, Plant and Soil Sciences, Australian Research Council Centre of Excellence in Plant Energy Biology, School of Life Sciences, La Trobe University, Bundoora, Victoria, Australia
| | - James Whelan
- Department of Animal, Plant and Soil Sciences, Australian Research Council Centre of Excellence in Plant Energy Biology, School of Life Sciences, La Trobe University, Bundoora, Victoria, Australia
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Li L, Lavell A, Meng X, Berkowitz O, Selinski J, van de Meene A, Carrie C, Benning C, Whelan J, De Clercq I, Wang Y. Arabidopsis DGD1 SUPPRESSOR1 Is a Subunit of the Mitochondrial Contact Site and Cristae Organizing System and Affects Mitochondrial Biogenesis. Plant Cell 2019; 31:1856-1878. [PMID: 31118221 PMCID: PMC6713299 DOI: 10.1105/tpc.18.00885] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/28/2018] [Revised: 04/15/2019] [Accepted: 05/09/2019] [Indexed: 05/04/2023]
Abstract
Mitochondrial and plastid biogenesis requires the biosynthesis and assembly of proteins, nucleic acids, and lipids. In Arabidopsis (Arabidopsis thaliana), the mitochondrial outer membrane protein DGD1 SUPPRESSOR1 (DGS1) is part of a large multi-subunit protein complex that contains the mitochondrial contact site and cristae organizing system 60-kD subunit, the translocase of outer mitochondrial membrane 40-kD subunit (TOM40), the TOM20s, and the Rieske FeS protein. A point mutation in DGS1, dgs1-1, altered the stability and protease accessibility of this complex. This altered mitochondrial biogenesis, mitochondrial size, lipid content and composition, protein import, and respiratory capacity. Whole plant physiology was affected in the dgs1-1 mutant as evidenced by tolerance to imposed drought stress and altered transcriptional responses of markers of mitochondrial retrograde signaling. Putative orthologs of Arabidopsis DGS1 are conserved in eukaryotes, including the Nuclear Control of ATP Synthase2 (NCA2) protein in yeast (Saccharomyces cerevisiae), but lost in Metazoa. The genes encoding DGS1 and NCA2 are part of a similar coexpression network including genes encoding proteins involved in mitochondrial fission, morphology, and lipid homeostasis. Thus, DGS1 links mitochondrial protein and lipid import with cellular lipid homeostasis and whole plant stress responses.
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Affiliation(s)
- Lu Li
- Department of Animal, Plant and Soil Science, School of Life Science, Australian Research Council Centre of Excellence in Plant Energy Biology, La Trobe University, 5 Ring Road, Bundoora, 3086, Victoria, Australia
| | - Anastasiya Lavell
- MSU-DOE Plant Research Laboratory and Department of Biochemistry and Molecular Biology, Michigan State University, East Lansing, Michigan 48824
| | - Xiangxiang Meng
- Department of Animal, Plant and Soil Science, School of Life Science, Australian Research Council Centre of Excellence in Plant Energy Biology, La Trobe University, 5 Ring Road, Bundoora, 3086, Victoria, Australia
| | - Oliver Berkowitz
- Department of Animal, Plant and Soil Science, School of Life Science, Australian Research Council Centre of Excellence in Plant Energy Biology, La Trobe University, 5 Ring Road, Bundoora, 3086, Victoria, Australia
| | - Jennifer Selinski
- Department of Animal, Plant and Soil Science, School of Life Science, Australian Research Council Centre of Excellence in Plant Energy Biology, La Trobe University, 5 Ring Road, Bundoora, 3086, Victoria, Australia
| | | | - Chris Carrie
- Department Biologie I - Botanik, Ludwig-Maximilians-Universität München, Großhadernerstrasse 2-4, Planegg-Martinsried, 82152, Germany
| | - Christoph Benning
- MSU-DOE Plant Research Laboratory and Department of Biochemistry and Molecular Biology, Michigan State University, East Lansing, Michigan 48824
| | - James Whelan
- Department of Animal, Plant and Soil Science, School of Life Science, Australian Research Council Centre of Excellence in Plant Energy Biology, La Trobe University, 5 Ring Road, Bundoora, 3086, Victoria, Australia
| | - Inge De Clercq
- Department of Animal, Plant and Soil Science, School of Life Science, Australian Research Council Centre of Excellence in Plant Energy Biology, La Trobe University, 5 Ring Road, Bundoora, 3086, Victoria, Australia
| | - Yan Wang
- Department of Animal, Plant and Soil Science, School of Life Science, Australian Research Council Centre of Excellence in Plant Energy Biology, La Trobe University, 5 Ring Road, Bundoora, 3086, Victoria, Australia
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10
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Abstract
Malate valves act as powerful systems for balancing the ATP/NAD(P)H ratio required in various subcellular compartments in plant cells. As components of malate valves, isoforms of malate dehydrogenases (MDHs) and dicarboxylate translocators catalyse the reversible interconversion of malate and oxaloacetate and their transport. Depending on the co-enzyme specificity of the MDH isoforms, either NADH or NADPH can be transported indirectly. Arabidopsis thaliana possesses nine genes encoding MDH isoenzymes. Activities of NAD-dependent MDHs have been detected in mitochondria, peroxisomes, cytosol and plastids. In addition, chloroplasts possess a NADP-dependent MDH isoform. The NADP-MDH as part of the 'light malate valve' plays an important role as a poising mechanism to adjust the ATP/NADPH ratio in the stroma. Its activity is strictly regulated by post-translational redox-modification mediated via the ferredoxin-thioredoxin system and fine control via the NADP+ /NADP(H) ratio, thereby maintaining redox homeostasis under changing conditions. In contrast, the plastid NAD-MDH ('dark malate valve') is constitutively active and its lack leads to failure in early embryo development. While redox regulation of the main cytosolic MDH isoform has been shown, knowledge about regulation of the other two cytosolic MDHs as well as NAD-MDH isoforms from peroxisomes and mitochondria is still lacking. Knockout mutants lacking the isoforms from chloroplasts, mitochondria and peroxisomes have been characterised, but not much is known about cytosolic NAD-MDH isoforms and their role in planta. This review updates the current knowledge on MDH isoforms and the shuttle systems for intercompartmental dicarboxylate exchange, focusing on the various metabolic functions of these valves.
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Affiliation(s)
- J. Selinski
- Department of Animal, Plant, and Soil ScienceAustralian Research Council Centre of Excellence in Plant Energy BiologySchool of Life ScienceLa Trobe University BundooraBundooraAustralia
| | - R. Scheibe
- Division of Plant PhysiologyDepartment of Biology/ChemistryUniversity of OsnabrueckOsnabrueckGermany
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11
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Selinski J, Scheibe R, Day DA, Whelan J. Alternative Oxidase Is Positive for Plant Performance. Trends Plant Sci 2018; 23:588-597. [PMID: 29665989 DOI: 10.1016/j.tplants.2018.03.012] [Citation(s) in RCA: 84] [Impact Index Per Article: 14.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/06/2017] [Revised: 03/15/2018] [Accepted: 03/22/2018] [Indexed: 05/02/2023]
Abstract
The alternative pathway of mitochondrial electron transport, which terminates in the alternative oxidase (AOX), uncouples oxidation of substrate from mitochondrial ATP production, yet plant performance is improved under adverse growth conditions. AOX is regulated at different levels. Identification of regulatory transcription factors shows that Arabidopsis thaliana AOX1a is under strong transcriptional suppression. At the protein level, the primary structure is not optimised for activity. Maximal activity requires the presence of various metabolites, such as tricarboxylic acid-cycle intermediates that act in an isoform-specific manner. In this opinion article we propose that the regulatory mechanisms that keep AOX activity suppressed, at both the gene and protein level, are positive for plant performance due to the flexible short- and long-term fine-tuning.
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Affiliation(s)
- Jennifer Selinski
- Department of Animal, Plant, and Soil Science, Australian Research Council Centre of Excellence in Plant Energy Biology, School of Life Science, La Trobe University Bundoora, VIC 3083, Australia.
| | - Renate Scheibe
- Division of Plant Physiology, Department of Biology/Chemistry, University of Osnabrueck, D-49069 Osnabrueck, Germany
| | - David A Day
- College of Science and Engineering, Flinders University, GPO Box 2100, Adelaide, SA 5001, Australia
| | - James Whelan
- Department of Animal, Plant, and Soil Science, Australian Research Council Centre of Excellence in Plant Energy Biology, School of Life Science, La Trobe University Bundoora, VIC 3083, Australia
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12
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Wang Y, Berkowitz O, Selinski J, Xu Y, Hartmann A, Whelan J. Stress responsive mitochondrial proteins in Arabidopsis thaliana. Free Radic Biol Med 2018; 122:28-39. [PMID: 29555593 DOI: 10.1016/j.freeradbiomed.2018.03.031] [Citation(s) in RCA: 40] [Impact Index Per Article: 6.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 11/14/2017] [Revised: 03/05/2018] [Accepted: 03/16/2018] [Indexed: 12/27/2022]
Abstract
In the last decade plant mitochondria have emerged as a target, sensor and initiator of signalling cascades to a variety of stress and adverse growth conditions. A combination of various 'omic profiling approaches combined with forward and reverse genetic studies have defined how mitochondria respond to stress and the signalling pathways and regulators of these responses. Reactive oxygen species (ROS)-dependent and -independent pathways, specific metabolites, complex I dysfunction, and the mitochondrial unfolded protein response (UPR) pathway have been proposed to date. These pathways are regulated by kinases (sucrose non-fermenting response like kinase; cyclin dependent protein kinase E 1) and transcription factors from the abscisic acid-related, WRKY and NAC families. A number of independent studies have revealed that these mitochondrial signalling pathways interact with a variety of phytohormone signalling pathways. While this represents significant progress in the last decade there are more pathways to be uncovered. Post-transcriptional/translational regulation is also a likely determinant of the mitochondrial stress response. Unbiased analyses of the expression of genes encoding mitochondrial proteins in a variety of stress conditions reveal a modular network exerting a high degree of anterograde control. As abiotic and biotic stresses have significant impact on the yield of important crops such as rice, wheat and barley we will give an outlook of how knowledge gained in Arabidopsis may help to increase crop production and how emerging technologies may contribute.
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Affiliation(s)
- Yan Wang
- Department of Animal, Plant and Soil Sciences, Australian Research Council Centre of Excellence in Plant Energy Biology, School of Life Sciences, La Trobe University, Bundoora, Victoria, Australia
| | - Oliver Berkowitz
- Department of Animal, Plant and Soil Sciences, Australian Research Council Centre of Excellence in Plant Energy Biology, School of Life Sciences, La Trobe University, Bundoora, Victoria, Australia.
| | - Jennifer Selinski
- Department of Animal, Plant and Soil Sciences, Australian Research Council Centre of Excellence in Plant Energy Biology, School of Life Sciences, La Trobe University, Bundoora, Victoria, Australia
| | - Yue Xu
- Department of Animal, Plant and Soil Sciences, Australian Research Council Centre of Excellence in Plant Energy Biology, School of Life Sciences, La Trobe University, Bundoora, Victoria, Australia
| | - Andreas Hartmann
- Department of Animal, Plant and Soil Sciences, Australian Research Council Centre of Excellence in Plant Energy Biology, School of Life Sciences, La Trobe University, Bundoora, Victoria, Australia
| | - James Whelan
- Department of Animal, Plant and Soil Sciences, Australian Research Council Centre of Excellence in Plant Energy Biology, School of Life Sciences, La Trobe University, Bundoora, Victoria, Australia
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Selinski J, Hartmann A, Deckers-Hebestreit G, Day DA, Whelan J, Scheibe R. Alternative Oxidase Isoforms Are Differentially Activated by Tricarboxylic Acid Cycle Intermediates. Plant Physiol 2018; 176:1423-1432. [PMID: 29208641 PMCID: PMC5813554 DOI: 10.1104/pp.17.01331] [Citation(s) in RCA: 54] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/18/2017] [Accepted: 11/30/2017] [Indexed: 05/18/2023]
Abstract
The cyanide-insensitive alternative oxidase (AOX) is a non-proton-pumping ubiquinol oxidase that catalyzes the reduction of oxygen to water and is posttranslationally regulated by redox mechanisms and 2-oxo acids. Arabidopsis (Arabidopsis thaliana) possesses five AOX isoforms (AOX1A-AOX1D and AOX2). AOX1D expression is increased in aox1a knockout mutants from Arabidopsis (especially after restriction of the cytochrome c pathway) but cannot compensate for the lack of AOX1A, suggesting a difference in the regulation of these isoforms. Therefore, we analyzed the different AOX isoenzymes with the aim to identify differences in their posttranslational regulation. Seven tricarboxylic acid cycle intermediates (citrate, isocitrate, 2-oxoglutarate, succinate, fumarate, malate, and oxaloacetate) were tested for their influence on AOX1A, AOX1C, and AOX1D wild-type protein activity using a refined in vitro system. AOX1C is insensitive to all seven organic acids, AOX1A and AOX1D are both activated by 2-oxoglutarate, but only AOX1A is additionally activated by oxaloacetate. Furthermore, AOX isoforms cannot be transformed to mimic one another by substituting the variable cysteine residues at position III in the protein. In summary, we show that AOX isoforms from Arabidopsis are differentially fine-regulated by tricarboxylic acid cycle metabolites (most likely depending on the amino-terminal region around the highly conserved cysteine residues known to be involved in regulation by the 2-oxo acids pyruvate and glyoxylate) and propose that this is the main reason why they cannot functionally compensate for each other.
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Affiliation(s)
- Jennifer Selinski
- Division of Plant Physiology, Department of Biology/Chemistry, University of Osnabrueck, D-49069 Osnabrueck, Germany
| | - Andreas Hartmann
- Division of Plant Physiology, Department of Biology/Chemistry, University of Osnabrueck, D-49069 Osnabrueck, Germany
| | - Gabriele Deckers-Hebestreit
- Division of Microbiology, Department of Biology/Chemistry, University of Osnabrueck, D-49069 Osnabrueck, Germany
| | - David A Day
- College of Science and Engineering, Flinders University, Adelaide, South Australia 5001, Australia
| | - James Whelan
- Department of Animal, Plant, and Soil Science, Australian Research Council Centre of Excellence in Plant Energy Biology, School of Life Science, La Trobe University, Bundoora, Victoria 3083, Australia
| | - Renate Scheibe
- Division of Plant Physiology, Department of Biology/Chemistry, University of Osnabrueck, D-49069 Osnabrueck, Germany
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Lyu W, Selinski J, Li L, Day DA, Murcha MW, Whelan J, Wang Y. Isolation and Respiratory Measurements of Mitochondria from Arabidopsis thaliana. J Vis Exp 2018. [PMID: 29364229 DOI: 10.3791/56627] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/26/2022] Open
Abstract
Mitochondria are essential organelles involved in numerous metabolic pathways in plants, most notably the production of adenosine triphosphate (ATP) from the oxidation of reduced compounds such as nicotinamide adenine dinucleotide (NADH) and flavin adenine dinucleotide (FADH2). The complete annotation of the Arabidopsis thaliana genome has established it as the most widely used plant model system, and thus the need to purify mitochondria from a variety of organs (leaf, root, or flower) is necessary to fully utilize the tools that are now available for Arabidopsis to study mitochondrial biology. Mitochondria are isolated by homogenization of the tissue using a variety of approaches, followed by a series of differential centrifugation steps producing a crude mitochondrial pellet that is further purified using continuous colloidal density gradient centrifugation. The colloidal density material is subsequently removed by multiple centrifugation steps. Starting from 100 g of fresh leaf tissue, 2 - 3 mg of mitochondria can be routinely obtained. Respiratory experiments on these mitochondria display typical rates of 100 - 250 nmol O2 min-1 mg total mitochondrial protein-1 (NADH-dependent rate) with the ability to use various substrates and inhibitors to determine which substrates are being oxidized and the capacity of the alternative and cytochrome terminal oxidases. This protocol describes an isolation method of mitochondria from Arabidopsis thaliana leaves using continuous colloidal density gradients and an efficient respiratory measurements of purified plant mitochondria.
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Affiliation(s)
- Wenhui Lyu
- ARC Centre of Excellence in Plant Energy Biology, Department of Animal, Plant and Soil Science, School of Life Science, La Trobe University
| | - Jennifer Selinski
- ARC Centre of Excellence in Plant Energy Biology, Department of Animal, Plant and Soil Science, School of Life Science, La Trobe University;
| | - Lu Li
- ARC Centre of Excellence in Plant Energy Biology, Department of Animal, Plant and Soil Science, School of Life Science, La Trobe University
| | - David A Day
- School of Biological Sciences, Flinders University
| | - Monika W Murcha
- ARC Centre of Excellence in Plant Energy Biology, University of Western Australia
| | - James Whelan
- ARC Centre of Excellence in Plant Energy Biology, Department of Animal, Plant and Soil Science, School of Life Science, La Trobe University
| | - Yan Wang
- ARC Centre of Excellence in Plant Energy Biology, Department of Animal, Plant and Soil Science, School of Life Science, La Trobe University
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Selinski J, Hartmann A, Kordes A, Deckers-Hebestreit G, Whelan J, Scheibe R. Analysis of Posttranslational Activation of Alternative Oxidase Isoforms. Plant Physiol 2017; 174:2113-2127. [PMID: 28596420 PMCID: PMC5543971 DOI: 10.1104/pp.17.00681] [Citation(s) in RCA: 34] [Impact Index Per Article: 4.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/31/2017] [Accepted: 06/05/2017] [Indexed: 05/05/2023]
Abstract
Mitochondrial alternative oxidase (AOX) in plants is a non-proton-motive ubiquinol oxidase that is activated by redox mechanisms and 2-oxo acids. A comparative analysis of the AOX isoenzymes AOX1A, AOX1C, and AOX1D from Arabidopsis (Arabidopsis thaliana) revealed that cysteine residues, CysI and CysII, are both involved in 2-oxo acid activation, with AOX1A activity being more increased by 2-oxo acids than that of AOX1C and AOX1D. Substitution of cysteine in AOX1A by glutamate mimicked its activation by pyruvate or glyoxylate, but not in AOX1C and AOX1D. CysIII, only present in AOX1A, is not involved in activation by reduction or metabolites, but substitutions at this position affected activity. AOX1A carrying a serine residue at position CysI was activated by succinate, while correspondingly substituted variants of AOX1C and AOX1D were insensitive. Activation by glutamate at CysI and CysII is consistent with the formation of the thiohemiacetal, while succinate activation after changing CysI to serine suggests hemiacetal formation. Surprisingly, in AOX1A, replacement of CysI by alanine, which cannot form a (thio)hemiacetal, led to even higher activities, pointing to an alternative mechanism of activation. Taken together, our results demonstrate that AOX isoforms are differentially activated and that activation at CysI and CysII is additive.
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Affiliation(s)
- Jennifer Selinski
- Division of Plant Physiology, Department of Biology/Chemistry, University of Osnabrueck, D-49069 Osnabrueck, Germany
| | - Andreas Hartmann
- Division of Plant Physiology, Department of Biology/Chemistry, University of Osnabrueck, D-49069 Osnabrueck, Germany
| | - Adrian Kordes
- Division of Plant Physiology, Department of Biology/Chemistry, University of Osnabrueck, D-49069 Osnabrueck, Germany
| | - Gabriele Deckers-Hebestreit
- Division of Microbiology, Department of Biology/Chemistry, University of Osnabrueck, D-49069 Osnabrueck, Germany
| | - James Whelan
- Department of Animal, Plant, and Soil Science, Australian Research Council Centre of Excellence in Plant Energy Biology, School of Life Science, La Trobe University, Bundoora, Victoria 3083, Australia
| | - Renate Scheibe
- Division of Plant Physiology, Department of Biology/Chemistry, University of Osnabrueck, D-49069 Osnabrueck, Germany
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Zhang ZS, Liu MJ, Scheibe R, Selinski J, Zhang LT, Yang C, Meng XL, Gao HY. Contribution of the Alternative Respiratory Pathway to PSII Photoprotection in C3 and C4 Plants. Mol Plant 2017; 10:131-142. [PMID: 27746301 DOI: 10.1016/j.molp.2016.10.004] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/12/2016] [Revised: 09/29/2016] [Accepted: 10/05/2016] [Indexed: 05/02/2023]
Abstract
The mechanism by which the mitochondrial alternative oxidase (AOX) pathway contributes to photosystem II (PSII) photoprotection is in dispute. It was generally thought that the AOX pathway protects photosystems by dissipating excess reducing equivalents exported from chloroplasts through the malate/oxaloacetate (Mal/OAA) shuttle and thus preventing the over-reduction of chloroplasts. In this study, using the aox1a Arabidopsis mutant and nine other C3 and C4 plant species, we revealed an additional action model of the AOX pathway in PSII photoprotection. Although the AOX pathway contributes to PSII photoprotection in C3 leaves treated with high light, this contribution was observed to disappear when photorespiration was suppressed. Disruption or inhibition of the AOX pathway significantly decreased the photorespiration in C3 leaves. Moreover, the AOX pathway did not respond to high light and contributed little to PSII photoprotection in C4 leaves possessing a highly active Mal/OAA shuttle but with little photorespiration. These results demonstrate that the AOX pathway contributes to PSII photoprotection in C3 plants by maintaining photorespiration to detoxify glycolate and via the indirect export of excess reducing equivalents from chloroplasts by the Mal/OAA shuttle. This new action model explains why the AOX pathway does not contribute to PSII photoprotection in C4 plants.
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Affiliation(s)
- Zi-Shan Zhang
- State Key Laboratory of Crop Biology, Shandong Agricultural University, Tai'an 271018, China; College of Life Sciences, Shandong Agricultural University, Tai'an 271018, China; College of Horticulture Science and Engineering, Shandong Agricultural University, Tai'an 271018, China
| | - Mei-Jun Liu
- State Key Laboratory of Crop Biology, Shandong Agricultural University, Tai'an 271018, China; College of Life Sciences, Shandong Agricultural University, Tai'an 271018, China
| | - Renate Scheibe
- Department of Plant Physiology, FB5, University of Osnabrueck, 49069 Osnabrueck, Germany
| | - Jennifer Selinski
- Department of Plant Physiology, FB5, University of Osnabrueck, 49069 Osnabrueck, Germany
| | - Li-Tao Zhang
- State Key Laboratory of Crop Biology, Shandong Agricultural University, Tai'an 271018, China; College of Life Sciences, Shandong Agricultural University, Tai'an 271018, China; National and Local Joint Engineering Laboratory of Ecological Mariculture, Institute of Oceanology, Chinese Academy of Sciences, 7 Nanhai Road, Qingdao 266071, China
| | - Cheng Yang
- State Key Laboratory of Crop Biology, Shandong Agricultural University, Tai'an 271018, China; College of Life Sciences, Shandong Agricultural University, Tai'an 271018, China; Wheat Research Institute, Henan Academy of Agricultural Sciences, Zhengzhou, Henan 450002, China
| | - Xiang-Long Meng
- State Key Laboratory of Crop Biology, Shandong Agricultural University, Tai'an 271018, China; College of Life Sciences, Shandong Agricultural University, Tai'an 271018, China
| | - Hui-Yuan Gao
- State Key Laboratory of Crop Biology, Shandong Agricultural University, Tai'an 271018, China; College of Life Sciences, Shandong Agricultural University, Tai'an 271018, China.
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17
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Kozuleva M, Goss T, Twachtmann M, Rudi K, Trapka J, Selinski J, Ivanov B, Garapati P, Steinhoff HJ, Hase T, Scheibe R, Klare JP, Hanke GT. Ferredoxin:NADP(H) Oxidoreductase Abundance and Location Influences Redox Poise and Stress Tolerance. Plant Physiol 2016; 172:1480-1493. [PMID: 27634426 PMCID: PMC5100767 DOI: 10.1104/pp.16.01084] [Citation(s) in RCA: 25] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/11/2016] [Accepted: 09/13/2016] [Indexed: 05/20/2023]
Abstract
In linear photosynthetic electron transport, ferredoxin:NADP(H) oxidoreductase (FNR) transfers electrons from ferredoxin (Fd) to NADP+ Both NADPH and reduced Fd (Fdred) are required for reductive assimilation and light/dark activation/deactivation of enzymes. FNR is therefore a hub, connecting photosynthetic electron transport to chloroplast redox metabolism. A correlation between FNR content and tolerance to oxidative stress is well established, although the precise mechanism remains unclear. We investigated the impact of altered FNR content and localization on electron transport and superoxide radical evolution in isolated thylakoids, and probed resulting changes in redox homeostasis, expression of oxidative stress markers, and tolerance to high light in planta. Our data indicate that the ratio of Fdred to FNR is critical, with either too much or too little FNR potentially leading to increased superoxide production, and perception of oxidative stress at the level of gene transcription. In FNR overexpressing plants, which show more NADP(H) and glutathione pools, improved tolerance to high-light stress indicates that disturbance of chloroplast redox poise and increased free radical generation may help "prime" the plant and induce protective mechanisms. In fnr1 knock-outs, the NADP(H) and glutathione pools are more oxidized relative to the wild type, and the photoprotective effect is absent despite perception of oxidative stress at the level of gene transcription.
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Affiliation(s)
- Marina Kozuleva
- Institute of Basic Biological Problems, Russian Academy of Sciences, Puschino, 142290 Russia (M.K., B.I.)
- Department of Plant Physiology (T.G., M.T., J.T., J.S., P.G., R.S., G.T.H.) and Department of Biophysics (K.R., H.-J.S., J.P.K.), Osnabrück University, Osnabrück 49076, Germany
- Institute for Protein Research, Osaka University, Osaka 565-0871, Japan (T.H.); and
- School of Biochemistry and Chemistry, Queen Mary University of London, London E1 4NS, United Kingdom (G.T.H.)
| | - Tatjana Goss
- Institute of Basic Biological Problems, Russian Academy of Sciences, Puschino, 142290 Russia (M.K., B.I.)
- Department of Plant Physiology (T.G., M.T., J.T., J.S., P.G., R.S., G.T.H.) and Department of Biophysics (K.R., H.-J.S., J.P.K.), Osnabrück University, Osnabrück 49076, Germany
- Institute for Protein Research, Osaka University, Osaka 565-0871, Japan (T.H.); and
- School of Biochemistry and Chemistry, Queen Mary University of London, London E1 4NS, United Kingdom (G.T.H.)
| | - Manuel Twachtmann
- Institute of Basic Biological Problems, Russian Academy of Sciences, Puschino, 142290 Russia (M.K., B.I.)
- Department of Plant Physiology (T.G., M.T., J.T., J.S., P.G., R.S., G.T.H.) and Department of Biophysics (K.R., H.-J.S., J.P.K.), Osnabrück University, Osnabrück 49076, Germany
- Institute for Protein Research, Osaka University, Osaka 565-0871, Japan (T.H.); and
- School of Biochemistry and Chemistry, Queen Mary University of London, London E1 4NS, United Kingdom (G.T.H.)
| | - Katherina Rudi
- Institute of Basic Biological Problems, Russian Academy of Sciences, Puschino, 142290 Russia (M.K., B.I.)
- Department of Plant Physiology (T.G., M.T., J.T., J.S., P.G., R.S., G.T.H.) and Department of Biophysics (K.R., H.-J.S., J.P.K.), Osnabrück University, Osnabrück 49076, Germany
- Institute for Protein Research, Osaka University, Osaka 565-0871, Japan (T.H.); and
- School of Biochemistry and Chemistry, Queen Mary University of London, London E1 4NS, United Kingdom (G.T.H.)
| | - Jennifer Trapka
- Institute of Basic Biological Problems, Russian Academy of Sciences, Puschino, 142290 Russia (M.K., B.I.)
- Department of Plant Physiology (T.G., M.T., J.T., J.S., P.G., R.S., G.T.H.) and Department of Biophysics (K.R., H.-J.S., J.P.K.), Osnabrück University, Osnabrück 49076, Germany
- Institute for Protein Research, Osaka University, Osaka 565-0871, Japan (T.H.); and
- School of Biochemistry and Chemistry, Queen Mary University of London, London E1 4NS, United Kingdom (G.T.H.)
| | - Jennifer Selinski
- Institute of Basic Biological Problems, Russian Academy of Sciences, Puschino, 142290 Russia (M.K., B.I.)
- Department of Plant Physiology (T.G., M.T., J.T., J.S., P.G., R.S., G.T.H.) and Department of Biophysics (K.R., H.-J.S., J.P.K.), Osnabrück University, Osnabrück 49076, Germany
- Institute for Protein Research, Osaka University, Osaka 565-0871, Japan (T.H.); and
- School of Biochemistry and Chemistry, Queen Mary University of London, London E1 4NS, United Kingdom (G.T.H.)
| | - Boris Ivanov
- Institute of Basic Biological Problems, Russian Academy of Sciences, Puschino, 142290 Russia (M.K., B.I.)
- Department of Plant Physiology (T.G., M.T., J.T., J.S., P.G., R.S., G.T.H.) and Department of Biophysics (K.R., H.-J.S., J.P.K.), Osnabrück University, Osnabrück 49076, Germany
- Institute for Protein Research, Osaka University, Osaka 565-0871, Japan (T.H.); and
- School of Biochemistry and Chemistry, Queen Mary University of London, London E1 4NS, United Kingdom (G.T.H.)
| | - Prashanth Garapati
- Institute of Basic Biological Problems, Russian Academy of Sciences, Puschino, 142290 Russia (M.K., B.I.)
- Department of Plant Physiology (T.G., M.T., J.T., J.S., P.G., R.S., G.T.H.) and Department of Biophysics (K.R., H.-J.S., J.P.K.), Osnabrück University, Osnabrück 49076, Germany
- Institute for Protein Research, Osaka University, Osaka 565-0871, Japan (T.H.); and
- School of Biochemistry and Chemistry, Queen Mary University of London, London E1 4NS, United Kingdom (G.T.H.)
| | - Heinz-Juergen Steinhoff
- Institute of Basic Biological Problems, Russian Academy of Sciences, Puschino, 142290 Russia (M.K., B.I.)
- Department of Plant Physiology (T.G., M.T., J.T., J.S., P.G., R.S., G.T.H.) and Department of Biophysics (K.R., H.-J.S., J.P.K.), Osnabrück University, Osnabrück 49076, Germany
- Institute for Protein Research, Osaka University, Osaka 565-0871, Japan (T.H.); and
- School of Biochemistry and Chemistry, Queen Mary University of London, London E1 4NS, United Kingdom (G.T.H.)
| | - Toshiharu Hase
- Institute of Basic Biological Problems, Russian Academy of Sciences, Puschino, 142290 Russia (M.K., B.I.)
- Department of Plant Physiology (T.G., M.T., J.T., J.S., P.G., R.S., G.T.H.) and Department of Biophysics (K.R., H.-J.S., J.P.K.), Osnabrück University, Osnabrück 49076, Germany
- Institute for Protein Research, Osaka University, Osaka 565-0871, Japan (T.H.); and
- School of Biochemistry and Chemistry, Queen Mary University of London, London E1 4NS, United Kingdom (G.T.H.)
| | - Renate Scheibe
- Institute of Basic Biological Problems, Russian Academy of Sciences, Puschino, 142290 Russia (M.K., B.I.)
- Department of Plant Physiology (T.G., M.T., J.T., J.S., P.G., R.S., G.T.H.) and Department of Biophysics (K.R., H.-J.S., J.P.K.), Osnabrück University, Osnabrück 49076, Germany
- Institute for Protein Research, Osaka University, Osaka 565-0871, Japan (T.H.); and
- School of Biochemistry and Chemistry, Queen Mary University of London, London E1 4NS, United Kingdom (G.T.H.)
| | - Johann P Klare
- Institute of Basic Biological Problems, Russian Academy of Sciences, Puschino, 142290 Russia (M.K., B.I.)
- Department of Plant Physiology (T.G., M.T., J.T., J.S., P.G., R.S., G.T.H.) and Department of Biophysics (K.R., H.-J.S., J.P.K.), Osnabrück University, Osnabrück 49076, Germany
- Institute for Protein Research, Osaka University, Osaka 565-0871, Japan (T.H.); and
- School of Biochemistry and Chemistry, Queen Mary University of London, London E1 4NS, United Kingdom (G.T.H.)
| | - Guy T Hanke
- Institute of Basic Biological Problems, Russian Academy of Sciences, Puschino, 142290 Russia (M.K., B.I.);
- Department of Plant Physiology (T.G., M.T., J.T., J.S., P.G., R.S., G.T.H.) and Department of Biophysics (K.R., H.-J.S., J.P.K.), Osnabrück University, Osnabrück 49076, Germany;
- Institute for Protein Research, Osaka University, Osaka 565-0871, Japan (T.H.); and
- School of Biochemistry and Chemistry, Queen Mary University of London, London E1 4NS, United Kingdom (G.T.H.)
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18
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Selinski J, Hartmann A, Höfler S, Deckers-Hebestreit G, Scheibe R. Refined method to study the posttranslational regulation of alternative oxidases from Arabidopsis thaliana in vitro. Physiol Plant 2016; 157:264-79. [PMID: 26798996 DOI: 10.1111/ppl.12418] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/28/2015] [Revised: 11/27/2015] [Accepted: 11/28/2015] [Indexed: 05/27/2023]
Abstract
In isolated membranes, posttranslational regulation of quinol oxidase activities can only be determined simultaneously for all oxidases - quinol oxidases as well as cytochrome c oxidases - because of their identical localization. In this study, a refined method to determine the specific activity of a single quinol oxidase is exemplarily described for the alternative oxidase (AOX) isoform AOX1A from Arabidopsis thaliana and its corresponding mutants, using the respiratory chain of an Escherichia coli cytochrome bo and bd-I oxidase double mutant as a source to provide electrons necessary for O2 reduction via quinol oxidases. A highly sensitive and reproducible experimental set-up with prolonged linear time intervals of up to 60 s is presented, which enables the determination of constant activity rates in E. coli membrane vesicles enriched in the quinol oxidase of interest by heterologous expression, using a Clark-type oxygen electrode to continuously follow O2 consumption. For the calculation of specific quinol oxidase activity, activity rates were correlated with quantitative signal intensity determinations of AOX1A present in a membrane-bound state by immunoblot analyses, simultaneously enabling normalization of specific activities between different AOX proteins. In summary, the method presented is a powerful tool to study specific activities of individual quinol oxidases, like the different AOX isoforms, and their corresponding mutants upon modification by addition of effectors/inhibitors, and thus to characterize their individual mode of posttranslational regulation in a membranous environment.
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Affiliation(s)
- Jennifer Selinski
- Division of Plant Physiology, Department of Biology/Chemistry, University of Osnabrueck, D-49069, Osnabrueck, Germany
| | - Andreas Hartmann
- Division of Plant Physiology, Department of Biology/Chemistry, University of Osnabrueck, D-49069, Osnabrueck, Germany
| | - Saskia Höfler
- Division of Plant Physiology, Department of Biology/Chemistry, University of Osnabrueck, D-49069, Osnabrueck, Germany
| | - Gabriele Deckers-Hebestreit
- Division of Microbiology, Department of Biology/Chemistry, University of Osnabrueck, D-49069, Osnabrueck, Germany
| | - Renate Scheibe
- Division of Plant Physiology, Department of Biology/Chemistry, University of Osnabrueck, D-49069, Osnabrueck, Germany
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19
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Vishwakarma A, Tetali SD, Selinski J, Scheibe R, Padmasree K. Importance of the alternative oxidase (AOX) pathway in regulating cellular redox and ROS homeostasis to optimize photosynthesis during restriction of the cytochrome oxidase pathway in Arabidopsis thaliana. Ann Bot 2015; 116:555-69. [PMID: 26292995 PMCID: PMC4578005 DOI: 10.1093/aob/mcv122] [Citation(s) in RCA: 85] [Impact Index Per Article: 9.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/31/2015] [Revised: 03/13/2015] [Accepted: 06/08/2015] [Indexed: 05/17/2023]
Abstract
BACKGROUND AND AIMS The importance of the alternative oxidase (AOX) pathway, particularly AOX1A, in optimizing photosynthesis during de-etiolation, under elevated CO2, low temperature, high light or combined light and drought stress is well documented. In the present study, the role of AOX1A in optimizing photosynthesis was investigated when electron transport through the cytochrome c oxidase (COX) pathway was restricted at complex III. METHODS Leaf discs of wild-type (WT) and aox1a knock-out mutants of Arabidopsis thaliana were treated with antimycin A (AA) under growth-light conditions. To identify the impact of AOX1A deficiency in optimizing photosynthesis, respiratory O2 uptake and photosynthesis-related parameters were measured along with changes in redox couples, reactive oxygen species (ROS), lipid peroxidation and expression levels of genes related to respiration, the malate valve and the antioxidative system. KEY RESULTS In the absence of AA, aox1a knock-out mutants did not show any difference in physiological, biochemical or molecular parameters compared with WT. However, after AA treatment, aox1a plants showed a significant reduction in both respiratory O2 uptake and NaHCO3-dependent O2 evolution. Chlorophyll fluorescence and P700 studies revealed that in contrast to WT, aox1a knock-out plants were incapable of maintaining electron flow in the chloroplastic electron transport chain, and thereby inefficient heat dissipation (low non-photochemical quenching) was observed. Furthermore, aox1a mutants exhibited significant disturbances in cellular redox couples of NAD(P)H and ascorbate (Asc) and consequently accumulation of ROS and malondialdehyde (MDA) content. By contrast, WT plants showed a significant increase in transcript levels of CSD1, CAT1, sAPX, COX15 and AOX1A in contrast to aox1a mutants. CONCLUSIONS These results suggest that AOX1A plays a significant role in sustaining the chloroplastic redox state and energization to optimize photosynthesis by regulating cellular redox homeostasis and ROS generation when electron transport through the COX pathway is disturbed at complex III.
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Affiliation(s)
- Abhaypratap Vishwakarma
- Department of Plant Sciences, School of Life Sciences, University of Hyderabad, Hyderabad 500 046, India
| | - Sarada Devi Tetali
- Department of Plant Sciences, School of Life Sciences, University of Hyderabad, Hyderabad 500 046, India
| | - Jennifer Selinski
- Department of Plant Physiology, FB5, University of Osnabrück, 49069 Osnabrück, Germany and
| | - Renate Scheibe
- Department of Plant Physiology, FB5, University of Osnabrück, 49069 Osnabrück, Germany and
| | - Kollipara Padmasree
- Department of Biotechnology and Bioinformatics, University of Hyderabad, Hyderabad 500 046, India
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Selinski J, König N, Wellmeyer B, Hanke GT, Linke V, Neuhaus HE, Scheibe R. The plastid-localized NAD-dependent malate dehydrogenase is crucial for energy homeostasis in developing Arabidopsis thaliana seeds. Mol Plant 2014; 7:170-86. [PMID: 24198233 DOI: 10.1093/mp/sst151] [Citation(s) in RCA: 57] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/22/2023]
Abstract
In the absence of photosynthesis, ATP is imported into chloroplasts and non-green plastids by ATP/ADP transporters or formed during glycolysis, the latter requiring continuous regeneration of NAD(+), supplied by the plastidial isoform of NAD-MDH. During screening for T-DNA insertion mutants in the plNAD-MDH gene of Arabidopsis, only heterozygous plants could be isolated and homozygous knockout mutants grew only after complementation. These heterozygous plants show higher transcript levels of an alternative NAD(+)-regenerating enzyme, NADH-GOGAT, and, remarkably, improved growth when ammonium is the sole N-source. In situ hybridization and GUS-histochemical staining revealed that plNAD-MDH was particularly abundant in male and female gametophytes. Knockout plNAD-MDH pollen exhibit impaired tube growth in vitro, which can be overcome by adding the substrates of NADH-GOGAT. In vivo, knockout pollen is able to fertilize the egg cell. Young siliques of selfed heterozygous plants contain both green and white seeds corresponding to wild-type/heterozygous (green) and homozygous knockout mutants (white) in a (1:2):1 ratio. Embryos of the homozygous knockout seeds only reached the globular stage, did not green, and developed to tiny wrinkled seeds. Complementation with the gene under the native promoter rescued this defect, and all seeds developed as wild-type. This suggests that a blocked major physiological process in plNAD-MDH mutants stops both embryo and endosperm development, thus avoiding assimilate investment in compromised offspring.
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Affiliation(s)
- Jennifer Selinski
- Department of Plant Physiology, FB 5, University of Osnabrueck, D-49069 Osnabrueck, Germany
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Abstract
This review focuses on the energy metabolism during pollen maturation and tube growth and updates current knowledge. Pollen tube growth is essential for male reproductive success and extremely fast. Therefore, pollen development and tube growth are high energy-demanding processes. During the last years, various publications (including research papers and reviews) emphasize the importance of mitochondrial respiration and fermentation during male gametogenesis and pollen tube elongation. These pathways obviously contribute to satisfy the high energy demand, and there are many studies which suggest that respiration and fermentation are the only pathways to generate the needed energy. Here, we review data which show for the first time that in addition plastidial glycolysis and the balancing of the ATP/NAD(P)H ratio (by malate valves and NAD(+) biosynthesis) contribute to satisfy the energy demand during pollen development. Although the importance of energy generation by plastids was discounted during the last years (possibly due to the controversial opinion about their existence in pollen grains and pollen tubes), the available data underline their prime role during pollen maturation and tube growth.
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Key Words
- 2-OG, 2-oxoglutarate
- 2-PGA, 2-phosphoglycerate
- 3-PGA, 3-phosphoglycerate
- ACS, acetyl-CoA synthase
- ADH, alcohol dehydrogenase
- ALDH, aldehyde dehydrogenase
- AOX, alternative oxidase
- BPGA, bisphosphoglyceric acid
- ENO, enolase
- GAPDH, glyceraldehyde-3-phosphate dehydrogenase
- GOGAT, glutamate synthase
- GPT, G-6-P/phosphate translocators
- Gln, glutamine
- Glu, glutamate
- MDH, malate dehydrogenase
- NDP, nucleotide diphosphate kinase
- NMNAT, nicotinate/nicotinamide mononucleotide adenyltransferase
- NTT, ATP/ADP transporters
- OAA, oxaloacetate
- OPP, oxidative pentose-phosphate pathway
- PDC, pyruvate decarboxylase
- PDH, pyruvate dehydrogenase
- PEP, phosphoenolpyruvate
- PGAM, phosphoglycerate mutase
- PGDH, 3-phosphoglycerate dehydrogenase
- PK, pyruvate kinase
- PPSB, phosphorylated pathway of serine biosynthesis
- PPT, phosphoenolpyruvate/phosphate translocator
- PSP, phosphoserine phosphatase
- RNS, reactive nitrogen species
- ROS, reactive oxygen species
- RPOT, T3/T7 phage-type RNA polymerases
- T, malate/oxaloacetate translocator
- TP, triose phosphate.
- energy metabolism
- malate
- plastidial glycolysis
- pollen tube growth
- respiration
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Affiliation(s)
- Jennifer Selinski
- Department of Plant Physiology; University of Osnabrueck; Osnabrueck, Germany
| | - Renate Scheibe
- Department of Plant Physiology; University of Osnabrueck; Osnabrueck, Germany
- Correspondence to: Renate Scheibe;
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Selinski J, Scheibe R. Lack of malate valve capacities lead to improved N-assimilation and growth in transgenic A. thaliana plants. Plant Signal Behav 2014; 9:e29057. [PMID: 25763488 PMCID: PMC4091578 DOI: 10.4161/psb.29057] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/16/2014] [Accepted: 04/29/2014] [Indexed: 05/18/2023]
Abstract
In this study we analyzed the relationship between malate valve capacities, N-assimilation, and energy metabolism. We used transgenic plants either lacking the chloroplast NADP-dependent malate dehydrogenase or mutants with a decreased transcript level of the plastid-localized NAD-dependent malate dehydrogenase. Plants were grown on nitrate or ammonium, respectively, as the sole N-source and transcripts were analyzed by qRT-PCR. We could show that the lack of malate valve capacities enhances N-assimilation and plastidial glycolysis by increasing transcript levels of Fd-GOGATs or NADH-GOGAT and plastidic NAD-GAPDHs (GapCps), respectively. Based on our results, we conclude that the lack of malate valve capacities is balanced by an increase of the activity of plastid-localized glycolysis in order to cover the high demand for plastidial ATP, stressing the importance of the plastids for energy metabolism in plant cells.
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Hebbelmann I, Selinski J, Wehmeyer C, Goss T, Voss I, Mulo P, Kangasjärvi S, Aro EM, Oelze ML, Dietz KJ, Nunes-Nesi A, Do PT, Fernie AR, Talla SK, Raghavendra AS, Linke V, Scheibe R. Multiple strategies to prevent oxidative stress in Arabidopsis plants lacking the malate valve enzyme NADP-malate dehydrogenase. J Exp Bot 2012; 63:1445-59. [PMID: 22140244 PMCID: PMC3276105 DOI: 10.1093/jxb/err386] [Citation(s) in RCA: 96] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/12/2011] [Revised: 11/01/2011] [Accepted: 11/02/2011] [Indexed: 05/18/2023]
Abstract
The nuclear-encoded chloroplast NADP-dependent malate dehydrogenase (NADP-MDH) is a key enzyme controlling the malate valve, to allow the indirect export of reducing equivalents. Arabidopsis thaliana (L.) Heynh. T-DNA insertion mutants of NADP-MDH were used to assess the role of the light-activated NADP-MDH in a typical C(3) plant. Surprisingly, even when exposed to high-light conditions in short days, nadp-mdh knockout mutants were phenotypically indistinguishable from the wild type. The photosynthetic performance and typical antioxidative systems, such as the Beck-Halliwell-Asada pathway, were barely affected in the mutants in response to high-light treatment. The reactive oxygen species levels remained low, indicating the apparent absence of oxidative stress, in the mutants. Further analysis revealed a novel combination of compensatory mechanisms in order to maintain redox homeostasis in the nadp-mdh plants under high-light conditions, particularly an increase in the NTRC/2-Cys peroxiredoxin (Prx) system in chloroplasts. There were indications of adjustments in extra-chloroplastic components of photorespiration and proline levels, which all could dissipate excess reducing equivalents, sustain photosynthesis, and prevent photoinhibition in nadp-mdh knockout plants. Such metabolic flexibility suggests that the malate valve acts in concert with other NADPH-consuming reactions to maintain a balanced redox state during photosynthesis under high-light stress in wild-type plants.
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Affiliation(s)
- Inga Hebbelmann
- Department of Plant Physiology, FB5, University of Osnabrueck, D-49069 Osnabrueck, Germany
| | - Jennifer Selinski
- Department of Plant Physiology, FB5, University of Osnabrueck, D-49069 Osnabrueck, Germany
| | - Corinna Wehmeyer
- Department of Plant Physiology, FB5, University of Osnabrueck, D-49069 Osnabrueck, Germany
| | - Tatjana Goss
- Department of Plant Physiology, FB5, University of Osnabrueck, D-49069 Osnabrueck, Germany
| | - Ingo Voss
- Department of Plant Physiology, FB5, University of Osnabrueck, D-49069 Osnabrueck, Germany
| | - Paula Mulo
- Molecular Plant Biology, Department of Biochemistry and Food Chemistry, University of Turku, FIN-20014 Turku, Finland
| | - Saijaliisa Kangasjärvi
- Molecular Plant Biology, Department of Biochemistry and Food Chemistry, University of Turku, FIN-20014 Turku, Finland
| | - Eva-Mari Aro
- Molecular Plant Biology, Department of Biochemistry and Food Chemistry, University of Turku, FIN-20014 Turku, Finland
| | - Marie-Luise Oelze
- Biochemistry and Physiology of Plants, University of Bielefeld, D-33501 Bielefeld, Germany
| | - Karl-Josef Dietz
- Biochemistry and Physiology of Plants, University of Bielefeld, D-33501 Bielefeld, Germany
| | - Adriano Nunes-Nesi
- Max Planck Institute for Molecular Plant Physiology, Am Mühlenberg 1, D-14476 Potsdam-Golm, Germany
| | - Phuc T. Do
- Max Planck Institute for Molecular Plant Physiology, Am Mühlenberg 1, D-14476 Potsdam-Golm, Germany
| | - Alisdair R. Fernie
- Max Planck Institute for Molecular Plant Physiology, Am Mühlenberg 1, D-14476 Potsdam-Golm, Germany
| | - Sai K. Talla
- Department of Plant Sciences, School of Life Sciences, University of Hyderabad, Hyderabad 500 046, India
| | - Agepati S. Raghavendra
- Department of Plant Physiology, FB5, University of Osnabrueck, D-49069 Osnabrueck, Germany
- Department of Plant Sciences, School of Life Sciences, University of Hyderabad, Hyderabad 500 046, India
| | - Vera Linke
- Department of Plant Physiology, FB5, University of Osnabrueck, D-49069 Osnabrueck, Germany
| | - Renate Scheibe
- Department of Plant Physiology, FB5, University of Osnabrueck, D-49069 Osnabrueck, Germany
- To whom correspondence should be addressed. E-mail:
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