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Bruch GM, Engel K, Schropp J, Grabherr S. Realistic three-dimensional imaging of injuries in forensic medicine - Survey-based method comparison of CRT and VRT. J Forensic Leg Med 2024; 103:102681. [PMID: 38588619 DOI: 10.1016/j.jflm.2024.102681] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/09/2024] [Revised: 03/14/2024] [Accepted: 03/23/2024] [Indexed: 04/10/2024]
Abstract
OBJECTIVE A comparison between Cinematic Rendering Technique (CRT) and Volume Rendering Technique (VRT) in cases with postmortem CT-angiography (PMCTA) was carried out. METHODS For different injuries seen in PMCTA, a VRT and a CRT image of exactly the same pathological section was generated. Two questionnaires were created, one with CRT and one with VRT reconstructions, with the same questions per 3D-image. The questionnaires were sent to forensic pathologists, lawyers and police officers. In total eleven different injuries had to be analyzed. RESULTS In total 109 questionnaires were answered fully. Of these returnees, 36 stated that they were forensic pathologists. Seventy-three people were assigned to the group of medical laypersons, in the study this group consists mainly of police officers, judges and lawyers. Between the two software programs CRT and VRT that were compared, no significant difference could be identified in any of the participating groups with regard to the assessment of the life-threatening nature of the injury images shown. When asked about the comprehensibility of pathology, there was a significant difference in favour of CRT. This advantage was apparent to named medical laypersons and to forensic pathologists. CONCLUSIONS The study showed a positive trend that CRT may be more understandable than VRT. Not only the medical laypersons, but also the forensic physicians found CRT to be beneficial.
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Affiliation(s)
- G M Bruch
- Institut für Rechtsmedizin, Ludwig-Maximilians-Universität, Munich, Germany.
| | - K Engel
- Medical Imaging Technologies, Siemens Healthcare Technology Center, Erlangen, Germany
| | - J Schropp
- Jonas Schropp Consulting, Switzerland
| | - S Grabherr
- Centre Universitaire Romand de Médecine Légale, Hôpitaux Universitaires de Genève, Université de Genève, Switzerland; Centre Universitaire Romand de Médecine Légale, Centre Hospitalier Universitaire Vaudois, Université de Lausanne, Switzerland
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2
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Brunet J, Cook AC, Walsh CL, Cranley J, Tafforeau P, Engel K, Berruyer C, O’Leary EB, Bellier A, Torii R, Werlein C, Jonigk DD, Ackermann M, Dollman K, Lee PD. Multidimensional Analysis of the Adult Human Heart in Health and Disease using Hierarchical Phase-Contrast Tomography (HiP-CT). bioRxiv 2023:2023.10.09.561474. [PMID: 37873359 PMCID: PMC10592740 DOI: 10.1101/2023.10.09.561474] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/25/2023]
Abstract
Cardiovascular diseases (CVDs) are a leading cause of death worldwide. Current clinical imaging modalities provide resolution adequate for diagnosis but are unable to provide detail of structural changes in the heart, across length-scales, necessary for understanding underlying pathophysiology of disease. Hierarchical Phase-Contrast Tomography (HiP-CT), using new (4th) generation synchrotron sources, potentially overcomes this limitation, allowing micron resolution imaging of intact adult organs with unprecedented detail. In this proof of principle study (n=2), we show the utility of HiP-CT to image whole adult human hearts ex-vivo: one 'control' without known cardiac disease and one with multiple known cardiopulmonary pathologies. The resulting multiscale imaging was able to demonstrate exemplars of anatomy in each cardiac segment along with novel findings in the cardiac conduction system, from gross (20 um/voxel) to cellular scale (2.2 um/voxel), non-destructively, thereby bridging the gap between macroscopic and microscopic investigations. We propose that the technique represents a significant step in virtual autopsy methods for studying structural heart disease, facilitating research into abnormalities across scales and age-groups. It opens up possibilities for understanding and treating disease; and provides a cardiac 'blueprint' with potential for in-silico simulation, device design, virtual surgical training, and bioengineered heart in the future.
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Affiliation(s)
- J. Brunet
- Department of Mechanical Engineering, University College London, London, UK
- European Synchrotron Radiation Facility, Grenoble, France
| | - A. C. Cook
- UCL Institute of Cardiovascular Science, London, UK
| | - C. L. Walsh
- Department of Mechanical Engineering, University College London, London, UK
| | - J. Cranley
- Wellcome Sanger Institute, Wellcome Genome Campus, Hinxton, Cambridge, UK
| | - P. Tafforeau
- European Synchrotron Radiation Facility, Grenoble, France
| | - K. Engel
- Siemens Healthineers, Erlangen, Germany
| | - C. Berruyer
- Department of Mechanical Engineering, University College London, London, UK
- European Synchrotron Radiation Facility, Grenoble, France
| | - E. Burke O’Leary
- Department of Mechanical Engineering, University College London, London, UK
| | - A. Bellier
- Laboratoire d’Anatomie des Alpes Françaises (LADAF), Université Grenoble Alpes, Grenoble, F
| | - R. Torii
- Department of Mechanical Engineering, University College London, London, UK
| | - C. Werlein
- Institute of Pathology, Hannover Medical School, Hannover, Germany
- Biomedical Research in End-stage and Obstructive Lung Disease Hannover (BREATH), German Lung Research Centre (DZL), Hannover, Germany
| | - D. D. Jonigk
- Biomedical Research in End-stage and Obstructive Lung Disease Hannover (BREATH), German Lung Research Centre (DZL), Hannover, Germany
- Institute of Pathology, Aachen Medical University, RWTH Aachen, Germany
| | - M. Ackermann
- Institute of Pathology and Molecular Pathology, Helios University Clinic Wuppertal, University of Witten/Herdecke, Wuppertal, Germany
- Institute of Functional and Clinical Anatomy, University Medical Center of the Johannes Gutenberg-University Mainz, Mainz, Germany
| | - K. Dollman
- European Synchrotron Radiation Facility, Grenoble, France
| | - P. D. Lee
- Department of Mechanical Engineering, University College London, London, UK
- Research Complex at Harwell, Didcot, UK
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Pasini MPB, Engel E, Engel K, Mallmann AA, Link D. BIoecology of Oncideres cervina Thomson (Coleoptera: Cerambycidae) on Persea americana Mill. (Lauraceae). BRAZ J BIOL 2023; 83:e272252. [PMID: 37672434 DOI: 10.1590/1519-6984.272252] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/21/2023] [Accepted: 06/20/2023] [Indexed: 09/08/2023] Open
Abstract
Cerambycidae beetles limit production and establishment of forest and fruit trees. Oncideres cervina Thomson, 1868 (Coleoptera: Cerambycidae) is one of the most important species. The objective was to record O. cervina girdling branches of Persea americana Mill. (Lauraceae) for the first time, check the number of oviposition incisions (Noi) as a function of the diameter of branch sections, period of emergence, and describe the larval-pupal chamber. Individuals of O. cervina were observed, for the first time, in P. americana orchards in Santa Maria, Rio Grande do Sul, Brazil. The middle section of branches (40-60 cm interval) had higher number of incisions. Girdled branches with a diameter of 40-50 mm had higher number of them. Adults emerged from November through January. Larval-pupal boreholes had diameters between 9 and 11 mm, and average tunnel length was 28 mm, with a mean volume of consumed wood of 4.3 mL. This information is useful for establishing integrated pest management practices against O. cervina in P. americana since this crop has a high added value and can be significantly compromised by attack by Cerambycidae beetles.
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Affiliation(s)
- M P B Pasini
- INTAGRO Consultoria, Pesquisa e Treinamentos, Cruz Alta, RS, Brasil
| | - E Engel
- Universidade de São Paulo, Escola Superior de Agricultura "Luiz de Queiroz", Departamento de Entomologia e Acarologia, Piracicaba, SP, Brasil
| | - K Engel
- Universidade Federal do Paraná - UFPR, Departamento de Engenharia Florestal, Curitiba, PR, Brasil
| | - A A Mallmann
- Universidade Federal do Paraná - UFPR, Departamento de Engenharia Florestal, Curitiba, PR, Brasil
| | - D Link
- Universidade Federal de Santa Maria, Centro de Ciências Rurais, Departamento de Defesa Fitossanitária, Santa Maria, RS, Brasil
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Albert A, Alfaro R, Alvarez C, Arteaga-Velázquez JC, Avila Rojas D, Ayala Solares HA, Babu R, Belmont-Moreno E, Brisbois C, Caballero-Mora KS, Capistrán T, Carramiñana A, Casanova S, Chaparro-Amaro O, Cotti U, Cotzomi J, Coutiño de León S, De la Fuente E, Diaz Hernandez R, Dingus BL, DuVernois MA, Durocher M, Díaz-Vélez JC, Ellsworth RW, Engel K, Espinoza C, Fan KL, Fang K, Fernández Alonso M, Fleischhack H, Fraija N, García-González JA, Garfias F, González MM, Goodman JA, Harding JP, Hernandez S, Hinton J, Huang D, Hueyotl-Zahuantitla F, Hüntemeyer P, Iriarte A, Joshi V, Kaufmann S, Lee J, Linnemann JT, Longinotti AL, Luis-Raya G, Malone K, Martinez O, Martínez-Castro J, Matthews JA, Miranda-Romagnoli P, Morales-Soto JA, Moreno E, Mostafá M, Nayerhoda A, Nellen L, Nisa MU, Noriega-Papaqui R, Olivera-Nieto L, Omodei N, Pérez Araujo Y, Pérez-Pérez EG, Rho CD, Rosa-González D, Ruiz-Velasco E, Salazar H, Salazar-Gallegos D, Sandoval A, Schneider M, Serna-Franco J, Smith AJ, Son Y, Springer RW, Tibolla O, Tollefson K, Torres I, Torres-Escobedo R, Turner R, Ureña-Mena F, Varela E, Villaseñor L, Wang X, Watson IJ, Willox E, Yun-Cárcamo S, Zhou H, de León C, Beacom JF, Linden T, Ng KCY, Peter AHG, Zhou B. Discovery of Gamma Rays from the Quiescent Sun with HAWC. Phys Rev Lett 2023; 131:051201. [PMID: 37595214 DOI: 10.1103/physrevlett.131.051201] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/06/2022] [Revised: 01/27/2023] [Accepted: 06/23/2023] [Indexed: 08/20/2023]
Abstract
We report the first detection of a TeV γ-ray flux from the solar disk (6.3σ), based on 6.1 years of data from the High Altitude Water Cherenkov (HAWC) observatory. The 0.5-2.6 TeV spectrum is well fit by a power law, dN/dE=A(E/1 TeV)^{-γ}, with A=(1.6±0.3)×10^{-12} TeV^{-1} cm^{-2} s^{-1} and γ=3.62±0.14. The flux shows a strong indication of anticorrelation with solar activity. These results extend the bright, hard GeV emission from the disk observed with Fermi-LAT, seemingly due to hadronic Galactic cosmic rays showering on nuclei in the solar atmosphere. However, current theoretical models are unable to explain the details of how solar magnetic fields shape these interactions. HAWC's TeV detection thus deepens the mysteries of the solar-disk emission.
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Affiliation(s)
- A Albert
- Physics Division, Los Alamos National Laboratory, Los Alamos, NM 87544, USA
| | - R Alfaro
- Instituto de F'isica, Universidad Nacional Autónoma de México, Ciudad de Mexico, Mexico
| | - C Alvarez
- Universidad Autónoma de Chiapas, Tuxtla Gutiérrez, Chiapas, México
| | | | - D Avila Rojas
- Instituto de F'isica, Universidad Nacional Autónoma de México, Ciudad de Mexico, Mexico
| | - H A Ayala Solares
- Department of Physics, Pennsylvania State University, University Park, PA, USA
| | - R Babu
- Department of Physics, Michigan Technological University, Houghton, MI, USA
| | - E Belmont-Moreno
- Instituto de F'isica, Universidad Nacional Autónoma de México, Ciudad de Mexico, Mexico
| | - C Brisbois
- Department of Physics, University of Maryland, College Park, MD, USA
| | | | - T Capistrán
- Instituto de Astronom'ia, Universidad Nacional Autónoma de México, Ciudad de Mexico, Mexico
| | - A Carramiñana
- Instituto Nacional de Astrof'isica, Óptica y Electrónica, Puebla, Mexico
| | - S Casanova
- Instytut Fizyki Jadrowej im Henryka Niewodniczanskiego Polskiej Akademii Nauk, IFJ-PAN, Krakow, Poland
| | - O Chaparro-Amaro
- Centro de Investigaci'on en Computaci'on, Instituto Polit'ecnico Nacional, M'exico City, M'exico
| | - U Cotti
- Universidad Michoacana de San Nicolás de Hidalgo, Morelia, Mexico
| | - J Cotzomi
- Facultad de Ciencias F'isico Matemáticas, Benemérita Universidad Autónoma de Puebla, Puebla, Mexico
| | - S Coutiño de León
- Department of Physics, University of Wisconsin-Madison, Madison, WI, USA
| | - E De la Fuente
- Departamento de F'isica, Centro Universitario de Ciencias Exactase Ingenierias, Universidad de Guadalajara, Guadalajara, Mexico
| | - R Diaz Hernandez
- Instituto Nacional de Astrof'isica, Óptica y Electrónica, Puebla, Mexico
| | - B L Dingus
- Physics Division, Los Alamos National Laboratory, Los Alamos, NM 87544, USA
- Department of Physics, University of Maryland, College Park, MD, USA
| | - M A DuVernois
- Department of Physics, University of Wisconsin-Madison, Madison, WI, USA
| | - M Durocher
- Physics Division, Los Alamos National Laboratory, Los Alamos, NM 87544, USA
| | - J C Díaz-Vélez
- Departamento de F'isica, Centro Universitario de Ciencias Exactase Ingenierias, Universidad de Guadalajara, Guadalajara, Mexico
| | - R W Ellsworth
- Department of Physics, University of Maryland, College Park, MD, USA
| | - K Engel
- Department of Physics, University of Maryland, College Park, MD, USA
| | - C Espinoza
- Instituto de F'isica, Universidad Nacional Autónoma de México, Ciudad de Mexico, Mexico
| | - K L Fan
- Department of Physics, University of Maryland, College Park, MD, USA
| | - K Fang
- Department of Physics, University of Wisconsin-Madison, Madison, WI, USA
| | - M Fernández Alonso
- Department of Physics, Pennsylvania State University, University Park, PA, USA
| | - H Fleischhack
- Department of Physics, Catholic University of America, 620 Michigan Avenue NE, Washington, DC 20064
- NASA Goddard Space Flight Center, Greenbelt, MD 20771, USA
- Center for Research and Exploration in Space Science and Technology, NASA/GSFC, Greenbelt, MD 20771
| | - N Fraija
- Instituto de Astronom'ia, Universidad Nacional Autónoma de México, Ciudad de Mexico, Mexico
| | - J A García-González
- Tecnologico de Monterrey, Escuela de Ingeniería y Ciencias, Avenue Eugenio Garza Sada 2501, Monterrey, N.L., Mexico, 64849
| | - F Garfias
- Instituto de Astronom'ia, Universidad Nacional Autónoma de México, Ciudad de Mexico, Mexico
| | - M M González
- Instituto de Astronom'ia, Universidad Nacional Autónoma de México, Ciudad de Mexico, Mexico
| | - J A Goodman
- Department of Physics, University of Maryland, College Park, MD, USA
| | - J P Harding
- Physics Division, Los Alamos National Laboratory, Los Alamos, NM 87544, USA
| | - S Hernandez
- Instituto de F'isica, Universidad Nacional Autónoma de México, Ciudad de Mexico, Mexico
| | - J Hinton
- Max-Planck Institute for Nuclear Physics, 69117 Heidelberg, Germany
| | - D Huang
- Department of Physics, Michigan Technological University, Houghton, MI, USA
| | | | - P Hüntemeyer
- Department of Physics, Michigan Technological University, Houghton, MI, USA
| | - A Iriarte
- Instituto de Astronom'ia, Universidad Nacional Autónoma de México, Ciudad de Mexico, Mexico
| | - V Joshi
- Erlangen Centre for Astroparticle Physics, Friedrich-Alexander-Universität Erlangen-Nürnberg, Erlangen, Germany
| | - S Kaufmann
- Universidad Politecnica de Pachuca, Pachuca, Hgo, Mexico
| | - J Lee
- University of Seoul, Seoul, Rep. of Korea
| | - J T Linnemann
- Department of Physics and Astronomy, Michigan State University, East Lansing, MI, USA
| | - A L Longinotti
- Instituto de Astronom'ia, Universidad Nacional Autónoma de México, Ciudad de Mexico, Mexico
| | - G Luis-Raya
- Universidad Politecnica de Pachuca, Pachuca, Hgo, Mexico
| | - K Malone
- Space Science and Applications Group, Los Alamos National Laboratory, Los Alamos, NM 87544, USA
| | - O Martinez
- Facultad de Ciencias F'isico Matemáticas, Benemérita Universidad Autónoma de Puebla, Puebla, Mexico
| | - J Martínez-Castro
- Centro de Investigaci'on en Computaci'on, Instituto Polit'ecnico Nacional, M'exico City, M'exico
| | - J A Matthews
- Dept of Physics and Astronomy, University of New Mexico, Albuquerque, NM, USA
| | | | - J A Morales-Soto
- Universidad Michoacana de San Nicolás de Hidalgo, Morelia, Mexico
| | - E Moreno
- Facultad de Ciencias F'isico Matemáticas, Benemérita Universidad Autónoma de Puebla, Puebla, Mexico
| | - M Mostafá
- Department of Physics, Pennsylvania State University, University Park, PA, USA
| | - A Nayerhoda
- Instytut Fizyki Jadrowej im Henryka Niewodniczanskiego Polskiej Akademii Nauk, IFJ-PAN, Krakow, Poland
| | - L Nellen
- Instituto de Ciencias Nucleares, Universidad Nacional Autónoma de Mexico, Ciudad de Mexico, Mexico
| | - M U Nisa
- Department of Physics and Astronomy, Michigan State University, East Lansing, MI, USA
| | | | - L Olivera-Nieto
- Max-Planck Institute for Nuclear Physics, 69117 Heidelberg, Germany
| | - N Omodei
- Department of Physics, Stanford University: Stanford, CA 94305-4060, USA
| | - Y Pérez Araujo
- Instituto de Astronom'ia, Universidad Nacional Autónoma de México, Ciudad de Mexico, Mexico
| | | | - C D Rho
- Department of Physics, Sungkyunkwan University, Suwon 16419, South Korea
| | - D Rosa-González
- Instituto Nacional de Astrof'isica, Óptica y Electrónica, Puebla, Mexico
| | - E Ruiz-Velasco
- Max-Planck Institute for Nuclear Physics, 69117 Heidelberg, Germany
| | - H Salazar
- Facultad de Ciencias F'isico Matemáticas, Benemérita Universidad Autónoma de Puebla, Puebla, Mexico
| | - D Salazar-Gallegos
- Department of Physics and Astronomy, Michigan State University, East Lansing, MI, USA
| | - A Sandoval
- Instituto de F'isica, Universidad Nacional Autónoma de México, Ciudad de Mexico, Mexico
| | - M Schneider
- Department of Physics, University of Maryland, College Park, MD, USA
| | - J Serna-Franco
- Instituto de F'isica, Universidad Nacional Autónoma de México, Ciudad de Mexico, Mexico
| | - A J Smith
- Department of Physics, University of Maryland, College Park, MD, USA
| | - Y Son
- University of Seoul, Seoul, Rep. of Korea
| | - R W Springer
- Department of Physics and Astronomy, University of Utah, Salt Lake City, UT, USA
| | - O Tibolla
- Universidad Politecnica de Pachuca, Pachuca, Hgo, Mexico
| | - K Tollefson
- Department of Physics and Astronomy, Michigan State University, East Lansing, MI, USA
| | - I Torres
- Instituto Nacional de Astrof'isica, Óptica y Electrónica, Puebla, Mexico
| | - R Torres-Escobedo
- Tsung-Dao Lee Institute & School of Physics and Astronomy, Shanghai Jiao Tong University, Shanghai, People's Republic of China
| | - R Turner
- Department of Physics, Michigan Technological University, Houghton, MI, USA
| | - F Ureña-Mena
- Instituto Nacional de Astrof'isica, Óptica y Electrónica, Puebla, Mexico
| | - E Varela
- Facultad de Ciencias F'isico Matemáticas, Benemérita Universidad Autónoma de Puebla, Puebla, Mexico
| | - L Villaseñor
- Facultad de Ciencias F'isico Matemáticas, Benemérita Universidad Autónoma de Puebla, Puebla, Mexico
| | - X Wang
- Department of Physics, Michigan Technological University, Houghton, MI, USA
| | - I J Watson
- University of Seoul, Seoul, Rep. of Korea
| | - E Willox
- Department of Physics, University of Maryland, College Park, MD, USA
| | - S Yun-Cárcamo
- Department of Physics, University of Maryland, College Park, MD, USA
| | - H Zhou
- Tsung-Dao Lee Institute & School of Physics and Astronomy, Shanghai Jiao Tong University, Shanghai, People's Republic of China
| | - C de León
- Universidad Michoacana de San Nicolás de Hidalgo, Morelia, Mexico
| | - J F Beacom
- Center for Cosmology and AstroParticle Physics (CCAPP), Ohio State University, Columbus, Ohio 43210, USA
- Department of Physics, Ohio State University, Columbus, Ohio 43210, USA
- Department of Astronomy, Ohio State University, Columbus, Ohio 43210, USA
| | - T Linden
- The Oskar Klein Centre, Department of Physics, Stockholm University, AlbaNova, SE-10691 Stockholm, Sweden
| | - K C Y Ng
- Department of Physics, The Chinese University of Hong Kong, Sha Tin, Hong Kong, China
| | - A H G Peter
- Center for Cosmology and AstroParticle Physics (CCAPP), Ohio State University, Columbus, Ohio 43210, USA
- Department of Physics, Ohio State University, Columbus, Ohio 43210, USA
- Department of Astronomy, Ohio State University, Columbus, Ohio 43210, USA
- School of Natural Sciences, Institute for Advanced Study, 1 Einstein Drive, Princeton, NJ 08540, USA
| | - B Zhou
- William H. Miller III Department of Physics and Astronomy, Johns Hopkins University, Baltimore, Maryland 21218, USA
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Maraci Ö, Antonatou-Papaioannou A, Jünemann S, Engel K, Castillo-Gutiérrez O, Busche T, Kalinowski J, Caspers BA. Timing matters: age-dependent impacts of the social environment and host selection on the avian gut microbiota. Microbiome 2022; 10:202. [PMID: 36434663 PMCID: PMC9700942 DOI: 10.1186/s40168-022-01401-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 05/31/2022] [Accepted: 10/25/2022] [Indexed: 06/16/2023]
Abstract
BACKGROUND The establishment of the gut microbiota in early life is a critical process that influences the development and fitness of vertebrates. However, the relative influence of transmission from the early social environment and host selection throughout host ontogeny remains understudied, particularly in avian species. We conducted conspecific and heterospecific cross-fostering experiments in zebra finches (Taeniopygia guttata) and Bengalese finches (Lonchura striata domestica) under controlled conditions and repeatedly sampled the faecal microbiota of these birds over the first 3 months of life. We thus documented the development of the gut microbiota and characterised the relative impacts of the early social environment and host selection due to species-specific characteristics and individual genetic backgrounds across ontogeny by using 16S ribosomal RNA gene sequencing. RESULTS The taxonomic composition and community structure of the gut microbiota changed across ontogenetic stages; juvenile zebra finches exhibited higher alpha diversity than adults at the post-breeding stage. Furthermore, in early development, the microbial communities of juveniles raised by conspecific and heterospecific foster parents resembled those of their foster family, emphasising the importance of the social environment. In later stages, the social environment continued to influence the gut microbiota, but host selection increased in importance. CONCLUSIONS We provided a baseline description of the developmental succession of gut microbiota in zebra finches and Bengalese finches, which is a necessary first step for understanding the impact of the early gut microbiota on host fitness. Furthermore, for the first time in avian species, we showed that the relative strengths of the two forces that shape the establishment and maintenance of the gut microbiota (i.e. host selection and dispersal from the social environment) change during development, with host selection increasing in importance. This finding should be considered when experimentally manipulating the early-life gut microbiota. Our findings also provide new insights into the mechanisms of host selection. Video Abstract.
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Affiliation(s)
- Öncü Maraci
- Department of Behavioural Ecology, Bielefeld University, Bielefeld, Germany.
| | - Anna Antonatou-Papaioannou
- Evolutionary Biology, Bielefeld University, Bielefeld, Germany
- Institute of Biology-Zoology, Freie Universität Berlin, Berlin, Germany
| | - Sebastian Jünemann
- Institute for Bio- and Geosciences, Research Center Jülich, Jülich, Germany
- Faculty of Technology, Bielefeld University, Bielefeld, Germany
| | - Kathrin Engel
- Department of Behavioural Ecology, Bielefeld University, Bielefeld, Germany
| | - Omar Castillo-Gutiérrez
- Faculty of Technology, Bielefeld University, Bielefeld, Germany
- Center for Biotechnology (CeBiTec), Bielefeld University, Bielefeld, Germany
| | - Tobias Busche
- Center for Biotechnology (CeBiTec), Bielefeld University, Bielefeld, Germany
| | - Jörn Kalinowski
- Center for Biotechnology (CeBiTec), Bielefeld University, Bielefeld, Germany
| | - Barbara A Caspers
- Department of Behavioural Ecology, Bielefeld University, Bielefeld, Germany
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Lange P, Engel K, Schleid T. Cs 3La[AsS 4] 2: a caesium-containing lanthanum thioarsenate(V). Acta Cryst Sect A 2022. [DOI: 10.1107/s2053273322092117] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 03/19/2023]
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Pachowsky M, Morf H, Simon D, Schönau V, Valor L, Knitza J, Engel K, Uder M, Hueber A, Schett G, Kleyer A. OP0293 PHOTOREALISTIC DEPICTION OF RHEUMATIC PATHOLOGIES BY CINEMATIC RENDERING FACILITATES DISEASE UNDERSTANDING OF PATIENTS WITH RHEUMATIC DISEASES. Ann Rheum Dis 2022. [DOI: 10.1136/annrheumdis-2022-eular.1463] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/04/2022]
Abstract
BackgroundTreatment success of a rheumatic disease crucially depends on whether a patient is sufficiently informed about the disease[1]. Visual methods are suitable for explaining diseases[2]. Cinematic rendering (CR) is a new method that allows to segment standard medical images into images that illustrate disease pathologies in a photorealistic way. As such, CR provides new opportunities to visualize diseases and but could therefore be a valuable tool for patients with rheumatic and musculoskeletal disease (RMD).[3]ObjectivesWe questioned, if it is possible to apply CR on images from structural lesions of patients with rheumatoid arthritis (RA), Psoriatic Arthritis (PsA) and axial Spondyloarthritis (axSpA) and to test whether such images are helpful to patients with RMDs to understand their disease process. application in doctor-patient communication.MethodsWe selected conventional computed tomography (CT) and high-resolution peripheral CT (HR-pQCT) from patients with rheumatoid arthritis (RA), Psoriatic Arthritis (PsA) and axial Spondyloarthritis (axSpA) that showed typical changes of the respective disease. HR-pQCT measurements were performed in RA and PsA at the Rheumatology Department. CT Measurements of the spine in an axSpA patient was provided from AH. All images were segmented to CR images using a prototype software by the manufacturer Siemens Healthineers. In a prospective study on consecutive patients with RA, PsA, axSpA these images were used to explain the depicted pathognomonic pathologies and compared to conventional imaging in a structured doctor-patient interview. In the last step, patients filled in a quantitative questionnaire (Likert Scale 1-5) about their perspectives answering following questions: Did you understand your disease in the provided Cinematic Rendering images? Did you understand your disease better through the presentation using Cinematic Rendering images than with a normal X-ray image? Do you think it would be reasonable to use this type of Cinematic Rendering to improve patients’ understanding of their disease? Descriptive statistical methods were used.ResultsCR images of rheumatic diseases were successfully generated from above mentioned imaging data (CT, HR-pQCT). Bone erosions, osteophytes, enthesiophytes, osteoporosis and ankylosis of the spine could be visualized in photorealistic detail. Figure 1 shows examples of a images of a patient with RA and axSpA with typical bone changes.65 patients (23 RA/23 PsA/19 axSpA; f 55%) were guided through CR images of their respective disease by an experienced rheumatologist, followed by completing the questionnaire mentioned above. Patients stated that CR was very helpful to understand their disease process (4.39±0.15), that understanding diseases by CR was better than the one obtained by conventional radiographs (4.43±0.20) and that they considered such technology helpful for improving disease understanding (4.35±0.09).ConclusionCR seems to be a promising teaching tool for RMD patients facilitating an improved understanding of their disease process and in consequence my also improve adherence of RMD patients to their anti-rheumatic treatment.References[1]Ritschl, V., et al., 2020 EULAR points to consider for the prevention, screening, assessment and management of non-adherence to treatment in people with rheumatic and musculoskeletal diseases for use in clinical practice. Ann Rheum Dis, 2020.[2]Kleyer, A., et al., Development of three-dimensional prints of arthritic joints for supporting patients’ awareness to structural damage. Arthritis Res Ther, 2017. 19(1): p. 34.[3]Berger, F., et al., Application of Cinematic Rendering in Clinical Routine CT Examination of Ankle Sprains. AJR Am J Roentgenol, 2018. 211(4): p. 887-890.AcknowledgementsSiemens Healthineers /Dr.Klaus Engel for providing CR expertiseDisclosure of InterestsNone declared
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Engel K, Pankoke H, Jünemann S, Brandl HB, Sauer J, Griffith SC, Kalinowski J, Caspers BA. Family matters: skin microbiome reflects the social group and spatial proximity in wild zebra finches. BMC Ecol 2020; 20:58. [PMID: 33187490 PMCID: PMC7664024 DOI: 10.1186/s12898-020-00326-2] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/18/2020] [Accepted: 11/02/2020] [Indexed: 01/04/2023] Open
Abstract
Background So far, large numbers of studies investigating the microbiome have focused on gut microbiota and less have addressed the microbiome of the skin. Especially in avian taxa our understanding of the ecology and function of these bacteria remains incomplete. The involvement of skin bacteria in intra-specific communication has recently received attention, and has highlighted the need to understand what information is potentially being encoded in bacterial communities. Using next generation sequencing techniques, we characterised the skin microbiome of wild zebra finches, aiming to understand the impact of sex, age and group composition on skin bacteria communities. For this purpose, we sampled skin swabs from both sexes and two age classes (adults and nestlings) of 12 different zebra finch families and analysed the bacterial communities. Results Using 16S rRNA sequencing we found no effect of age, sex and family on bacterial diversity (alpha diversity). However, when comparing the composition (beta diversity), we found that animals of social groups (families) harbour highly similar bacterial communities on their skin with respect to community composition. Within families, closely related individuals shared significantly more bacterial taxa than non-related animals. In addition, we found that age (adults vs. nestlings) affected bacterial composition. Finally, we found that spatial proximity of nest sites, and therefore individuals, correlated with the skin microbiota similarity. Conclusions Birds harbour very diverse and complex bacterial assemblages on their skin. These bacterial communities are distinguishable and characteristic for intraspecific social groups. Our findings are indicative for a family-specific skin microbiome in wild zebra finches. Genetics and the (social) environment seem to be the influential factors shaping the complex bacterial communities. Bacterial communities associated with the skin have a potential to emit volatiles and therefore these communities may play a role in intraspecific social communication, e.g. via signalling social group membership.
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Affiliation(s)
- Kathrin Engel
- Department of Behavioural Ecology, Bielefeld University, Konsequenz 45, 33615, Bielefeld, Germany.
| | - Helga Pankoke
- Evonik Nutrition & Care GmbH, Kantstr. 2, 33790, Halle, Germany
| | - Sebastian Jünemann
- Center for Biotechnology (CeBiTec), Bielefeld University, Sequenz 1, 33615, Bielefeld, Germany.,Faculty of Technology, Bielefeld University, Universitätsstraße 25, 33615, Bielefeld, Germany
| | - Hanja B Brandl
- Institute of Zoology, Behavioural Biology, University of Hamburg, Martin-Luther-King Platz 3, 20146, Hamburg, Germany.,Department of Biological Sciences, Macquarie University, Sydney, NSW, 2109, Australia
| | - Jan Sauer
- Department of Behavioural Ecology, Bielefeld University, Konsequenz 45, 33615, Bielefeld, Germany
| | - Simon C Griffith
- Department of Biological Sciences, Macquarie University, Sydney, NSW, 2109, Australia
| | - Jörn Kalinowski
- Center for Biotechnology (CeBiTec), Bielefeld University, Sequenz 1, 33615, Bielefeld, Germany
| | - Barbara A Caspers
- Department of Behavioural Ecology, Bielefeld University, Konsequenz 45, 33615, Bielefeld, Germany.
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Simon D, Tascilar K, Kleyer A, Bayat S, Kampylafka E, Hueber A, Rech J, Schuster L, Engel K, Sticherling M, Schett G. OP0051 STRUCTURAL ENTHESEAL LESIONS IN PSORIASIS PATIENTS ARE ASSOCIATED WITH AN INCREASED RISK OF PROGRESSION TO PSORIATIC ARTHRITIS - A PROSPECTIVE COHORT STUDY. Ann Rheum Dis 2020. [DOI: 10.1136/annrheumdis-2020-eular.1524] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/04/2022]
Abstract
Background:We have previously reported that the presence of musculoskeletal pain in psoriasis patients is associated with a higher risk of developing psoriatic arthritis (PsA) (1). Furthermore, a subset of psoriasis patients shows evidence for structural entheseal lesions (SEL) in their hand joints (2), sometimes also referred as “Deep Koebner Phenomenon”, which are highly specific for psoriatic disease and virtually absent in healthy controls, rheumatoid arthritis and hand osteoarthritis patients (2-4). However, it remains unclear whether SEL alone or in combination with musculoskeletal pain are associated with the development of PsA.Objectives:To test whether the presence of SEL in psoriasis patients increases the risk for progression to PsA and how this is related to the presence of musculoskeletal pain.Methods:Psoriasis patients without evidence of PsA were enrolled in a prospective cohort study between 2011 and 2018. All patients underwent baseline assessment of SEL in their 2ndand 3rdMCP joints by high-resolution peripheral quantitative computed tomography (HR-pQCT). The risk of PsA development associated with SEL and arthralgia was explored using survival analyses and multivariable Cox regression models.Results:114 psoriasis patients (72 men/42 women) with a mean (SD) follow-up duration of 28.2 (17.7) months were included, 24 of whom developed PsA (9.7 /100 patient-years, 95%CI 6.2 to 14.5) during the observation period. Patients with SEL (N=41) were at higher risk of developing PsA compared to patients without such lesions (21.4/100 patient-years, 95%CI 12.5 to 34.3, HR 5.10, 95%CI 1.53 to 16.99, p=0.008) (Kaplan Meier plot A). Furthermore, while patients without arthralgia and without SEL had a very low progression rate to PsA (1/29; 3.4%), patients with arthralgia but no SEL showed higher progression (5/33; 15.2%), which was in line with previous observations (1) (Kaplan Meier plot B). Presence of SEL further enhanced the risk for progression to PsA both in the absence (6/16; 37.5%) and presence (6/14; 42.8%) of arthralgia with the highest progression rate in those subjects with both arthralgia and SEL (p<0.001 by log rank test for trend) (Kaplan Meier plot B).Conclusion:Presence of SEL is associated with an increased risk of developing PsA in patients with psoriasis. If used together with pain, SEL allow defining subsets of psoriasis patients with very low and very high risk to develop PsA.References:[1]Faustini F et al. Ann Rheum Dis. 2016;75:2068-2074[2]Simon D et al. Ann Rheum Dis. 2016;75:660-6[3]Finzel S et al. Ann Rheum Dis. 2011;70:122-7[4]Finzel S et al. Arthritis Rheum. 2011;63:1231-6Disclosure of Interests:David Simon Grant/research support from: Else Kröner-Memorial Scholarship, Novartis, Consultant of: Novartis, Lilly, Koray Tascilar: None declared, Arnd Kleyer Consultant of: Lilly, Gilead, Novartis,Abbvie, Speakers bureau: Novartis, Lilly, Sara Bayat Speakers bureau: Novartis, Eleni Kampylafka Speakers bureau: Novartis, BMS, Janssen, Axel Hueber Grant/research support from: Novartis, Lilly, Pfizer, Consultant of: Abbvie, BMS, Celgene, Gilead, GSK, Lilly, Novartis, Speakers bureau: GSK, Lilly, Novartis, Jürgen Rech Consultant of: BMS, Celgene, Novartis, Roche, Chugai, Speakers bureau: AbbVie, Biogen, BMS, Celgene, MSD, Novartis, Roche, Chugai, Pfizer, Lilly, Louis Schuster: None declared, Klaus Engel: None declared, Michael Sticherling Grant/research support from: Novartis, Consultant of: Advisory boards Abbvie, Celgene, Janssen Cilag, Lilly, Pfizer, MSD, Novartis, Amgen, Leo, Sanofi, UCB, Speakers bureau: Abbvie, Celgene, Janssen Cilag, Leo, MSD, Novartis, Pfizer, Georg Schett Speakers bureau: AbbVie, BMS, Celgene, Janssen, Eli Lilly, Novartis, Roche and UCB
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Albert A, Alfaro R, Alvarez C, Angeles Camacho JR, Arteaga-Velázquez JC, Arunbabu KP, Avila Rojas D, Ayala Solares HA, Baghmanyan V, Belmont-Moreno E, BenZvi SY, Brisbois C, Caballero-Mora KS, Capistrán T, Carramiñana A, Casanova S, Cotti U, Cotzomi J, Coutiño de León S, De la Fuente E, de León C, Dingus BL, DuVernois MA, Díaz-Vélez JC, Ellsworth RW, Engel K, Espinoza C, Fleischhack H, Fraija N, Galván-Gámez A, Garcia D, García-González JA, Garfias F, González MM, Goodman JA, Harding JP, Hernandez S, Hona B, Huang D, Hueyotl-Zahuantitla F, Hüntemeyer P, Iriarte A, Joshi V, Lara A, Lee WH, León Vargas H, Linnemann JT, Longinotti AL, Luis-Raya G, Lundeen J, López-Coto R, Malone K, Marinelli SS, Martinez-Castellanos I, Martínez-Castro J, Martínez-Huerta H, Matthews JA, Miranda-Romagnoli P, Morales-Soto JA, Moreno E, Nayerhoda A, Nellen L, Newbold M, Nisa MU, Noriega-Papaqui R, Omodei N, Peisker A, Pérez-Pérez EG, Rho CD, Rivière C, Rosa-González D, Rosenberg M, Ruiz-Velasco E, Salazar H, Salesa Greus F, Sandoval A, Schneider M, Schoorlemmer H, Sinnis G, Smith AJ, Springer RW, Surajbali P, Tabachnick E, Tanner M, Tibolla O, Tollefson K, Torres I, Torres-Escobedo R, Weisgarber T, Yodh G, Zepeda A, Zhou H. Constraints on Lorentz Invariance Violation from HAWC Observations of Gamma Rays above 100 TeV. Phys Rev Lett 2020; 124:131101. [PMID: 32302173 DOI: 10.1103/physrevlett.124.131101] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/18/2019] [Revised: 02/07/2020] [Accepted: 03/04/2020] [Indexed: 06/11/2023]
Abstract
Because of the high energies and long distances to the sources, astrophysical observations provide a unique opportunity to test possible signatures of Lorentz invariance violation (LIV). Superluminal LIV enables the decay of photons at high energy. The high altitude water Cherenkov (HAWC) observatory is among the most sensitive gamma-ray instruments currently operating above 10 TeV. HAWC finds evidence of 100 TeV photon emission from at least four astrophysical sources. These observations exclude, for the strongest of the limits set, the LIV energy scale to 2.2×10^{31} eV, over 1800 times the Planck energy and an improvement of 1 to 2 orders of magnitude over previous limits.
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Affiliation(s)
- A Albert
- Physics Division, Los Alamos National Laboratory, Los Alamos, New Mexico 87545, USA
| | - R Alfaro
- Instituto de Física, Universidad Nacional Autónoma de México, Ciudad de Mexico 04510, Mexico
| | - C Alvarez
- Universidad Autónoma de Chiapas, Tuxtla Gutiérrez, Chiapas 29050, Mexico
| | - J R Angeles Camacho
- Instituto de Física, Universidad Nacional Autónoma de México, Ciudad de Mexico 04510, Mexico
| | | | - K P Arunbabu
- Instituto de Geofísica, Universidad Nacional Autónoma de México, Ciudad de Mexico 04510, Mexico
| | - D Avila Rojas
- Instituto de Física, Universidad Nacional Autónoma de México, Ciudad de Mexico 04510, Mexico
| | - H A Ayala Solares
- Department of Physics, Pennsylvania State University, University Park, Pennsylvania 16802, USA
| | - V Baghmanyan
- Institute of Nuclear Physics Polish Academy of Sciences, PL-31342 IFJ-PAN, Krakow 31342, Poland
| | - E Belmont-Moreno
- Instituto de Física, Universidad Nacional Autónoma de México, Ciudad de Mexico 04510, Mexico
| | - S Y BenZvi
- Department of Physics & Astronomy, University of Rochester, Rochester, New York 14627, USA
| | - C Brisbois
- Department of Physics, Michigan Technological University, Houghton, Michigan 49931-1295, USA
| | - K S Caballero-Mora
- Universidad Autónoma de Chiapas, Tuxtla Gutiérrez, Chiapas 29050, Mexico
| | - T Capistrán
- Instituto Nacional de Astrofísica, Óptica y Electrónica, Puebla 72840, Mexico
| | - A Carramiñana
- Instituto Nacional de Astrofísica, Óptica y Electrónica, Puebla 72840, Mexico
| | - S Casanova
- Institute of Nuclear Physics Polish Academy of Sciences, PL-31342 IFJ-PAN, Krakow 31342, Poland
| | - U Cotti
- Universidad Michoacana de San Nicolás de Hidalgo, Morelia 58040, Mexico
| | - J Cotzomi
- Facultad de Ciencias Físico Matemáticas, Benemérita Universidad Autónoma de Puebla, Puebla 72570, Mexico
| | - S Coutiño de León
- Instituto Nacional de Astrofísica, Óptica y Electrónica, Puebla 72840, Mexico
| | - E De la Fuente
- Departamento de Física, CUCEI, Universidad de Guadalajara, Guadalajara 44430, Mexico
| | - C de León
- Universidad Michoacana de San Nicolás de Hidalgo, Morelia 58040, Mexico
| | - B L Dingus
- Physics Division, Los Alamos National Laboratory, Los Alamos, New Mexico 87545, USA
| | - M A DuVernois
- Department of Physics, University of Wisconsin-Madison, Madison, Wisconsin 53706, USA
| | - J C Díaz-Vélez
- Departamento de Física, Centro Universitario de los Valles, Universidad de Guadalajara, Guadalajara 46600, Mexico
| | - R W Ellsworth
- Department of Physics, University of Maryland, College Park, Maryland 20742-4111, USA
| | - K Engel
- Department of Physics, University of Maryland, College Park, Maryland 20742-4111, USA
| | - C Espinoza
- Instituto de Física, Universidad Nacional Autónoma de México, Ciudad de Mexico 04510, Mexico
| | - H Fleischhack
- Department of Physics, Michigan Technological University, Houghton, Michigan 49931-1295, USA
| | - N Fraija
- Instituto de Astronomía, Universidad Nacional Autónoma de México, Ciudad de Mexico 04510, Mexico
| | - A Galván-Gámez
- Instituto de Astronomía, Universidad Nacional Autónoma de México, Ciudad de Mexico 04510, Mexico
| | - D Garcia
- Instituto de Física, Universidad Nacional Autónoma de México, Ciudad de Mexico 04510, Mexico
| | - J A García-González
- Instituto de Física, Universidad Nacional Autónoma de México, Ciudad de Mexico 04510, Mexico
| | - F Garfias
- Instituto de Astronomía, Universidad Nacional Autónoma de México, Ciudad de Mexico 04510, Mexico
| | - M M González
- Instituto de Astronomía, Universidad Nacional Autónoma de México, Ciudad de Mexico 04510, Mexico
| | - J A Goodman
- Department of Physics, University of Maryland, College Park, Maryland 20742-4111, USA
| | - J P Harding
- Physics Division, Los Alamos National Laboratory, Los Alamos, New Mexico 87545, USA
| | - S Hernandez
- Instituto de Física, Universidad Nacional Autónoma de México, Ciudad de Mexico 04510, Mexico
| | - B Hona
- Department of Physics, Michigan Technological University, Houghton, Michigan 49931-1295, USA
| | - D Huang
- Department of Physics, Michigan Technological University, Houghton, Michigan 49931-1295, USA
| | | | - P Hüntemeyer
- Department of Physics, Michigan Technological University, Houghton, Michigan 49931-1295, USA
| | - A Iriarte
- Instituto de Astronomía, Universidad Nacional Autónoma de México, Ciudad de Mexico 04510, Mexico
| | - V Joshi
- Erlangen Centre for Astroparticle Physics, Friedrich-Alexander-Universität Erlangen-Nürnberg, 91058 Erlangen, Germany
| | - A Lara
- Instituto de Geofísica, Universidad Nacional Autónoma de México, Ciudad de Mexico 04510, Mexico
| | - W H Lee
- Instituto de Astronomía, Universidad Nacional Autónoma de México, Ciudad de Mexico 04510, Mexico
| | - H León Vargas
- Instituto de Física, Universidad Nacional Autónoma de México, Ciudad de Mexico 04510, Mexico
| | - J T Linnemann
- Department of Physics and Astronomy, Michigan State University, East Lansing, Michigan 48824, USA
| | - A L Longinotti
- Instituto Nacional de Astrofísica, Óptica y Electrónica, Puebla 72840, Mexico
| | - G Luis-Raya
- Universidad Politecnica de Pachuca, Pachuca, Hgo 42083, Mexico
| | - J Lundeen
- Department of Physics and Astronomy, Michigan State University, East Lansing, Michigan 48824, USA
| | - R López-Coto
- INFN and Universita di Padova, via Marzolo 8, I-35131, Padova, Italy
| | - K Malone
- Physics Division, Los Alamos National Laboratory, Los Alamos, New Mexico 87545, USA
| | - S S Marinelli
- Department of Physics and Astronomy, Michigan State University, East Lansing, Michigan 48824, USA
| | | | - J Martínez-Castro
- Centro de Investigación en Computación, Instituto Politécnico Nacional, México City 07738, Mexico
| | - H Martínez-Huerta
- Instituto de Física de São Carlos, Universidade de São Paulo, São Carlos, Sao Paolo 13566-590, Brasil
| | - J A Matthews
- Dept of Physics and Astronomy, University of New Mexico, Albuquerque, New Mexico 87131, USA
| | | | - J A Morales-Soto
- Universidad Michoacana de San Nicolás de Hidalgo, Morelia 58040, Mexico
| | - E Moreno
- Facultad de Ciencias Físico Matemáticas, Benemérita Universidad Autónoma de Puebla, Puebla 72570, Mexico
| | - A Nayerhoda
- Institute of Nuclear Physics Polish Academy of Sciences, PL-31342 IFJ-PAN, Krakow 31342, Poland
| | - L Nellen
- Instituto de Ciencias Nucleares, Universidad Nacional Autónoma de Mexico, Ciudad de Mexico 04510, Mexico
| | - M Newbold
- Department of Physics and Astronomy, University of Utah, Salt Lake City, Utah 84112, USA
| | - M U Nisa
- Department of Physics and Astronomy, Michigan State University, East Lansing, Michigan 48824, USA
| | | | - N Omodei
- Stanford University, Stanford, California 94305, USA
| | - A Peisker
- Department of Physics and Astronomy, Michigan State University, East Lansing, Michigan 48824, USA
| | - E G Pérez-Pérez
- Universidad Politecnica de Pachuca, Pachuca, Hgo 42083, Mexico
| | - C D Rho
- Department of Physics & Astronomy, University of Rochester, Rochester, New York 14627, USA
| | - C Rivière
- Department of Physics, University of Maryland, College Park, Maryland 20742-4111, USA
| | - D Rosa-González
- Instituto Nacional de Astrofísica, Óptica y Electrónica, Puebla 72840, Mexico
| | - M Rosenberg
- Department of Physics, Pennsylvania State University, University Park, Pennsylvania 16802, USA
| | - E Ruiz-Velasco
- Max-Planck Institute for Nuclear Physics, 69117 Heidelberg, Germany
| | - H Salazar
- Facultad de Ciencias Físico Matemáticas, Benemérita Universidad Autónoma de Puebla, Puebla 72570, Mexico
| | - F Salesa Greus
- Institute of Nuclear Physics Polish Academy of Sciences, PL-31342 IFJ-PAN, Krakow 31342, Poland
| | - A Sandoval
- Instituto de Física, Universidad Nacional Autónoma de México, Ciudad de Mexico 04510, Mexico
| | - M Schneider
- Department of Physics, University of Maryland, College Park, Maryland 20742-4111, USA
| | - H Schoorlemmer
- Max-Planck Institute for Nuclear Physics, 69117 Heidelberg, Germany
| | - G Sinnis
- Physics Division, Los Alamos National Laboratory, Los Alamos, New Mexico 87545, USA
| | - A J Smith
- Department of Physics, University of Maryland, College Park, Maryland 20742-4111, USA
| | - R W Springer
- Department of Physics and Astronomy, University of Utah, Salt Lake City, Utah 84112, USA
| | - P Surajbali
- Max-Planck Institute for Nuclear Physics, 69117 Heidelberg, Germany
| | - E Tabachnick
- Department of Physics, University of Maryland, College Park, Maryland 20742-4111, USA
| | - M Tanner
- Department of Physics, Pennsylvania State University, University Park, Pennsylvania 16802, USA
| | - O Tibolla
- Universidad Politecnica de Pachuca, Pachuca, Hgo 42083, Mexico
| | - K Tollefson
- Department of Physics and Astronomy, Michigan State University, East Lansing, Michigan 48824, USA
| | - I Torres
- Instituto Nacional de Astrofísica, Óptica y Electrónica, Puebla 72840, Mexico
| | - R Torres-Escobedo
- Departamento de Física, CUCEI, Universidad de Guadalajara, Guadalajara 44430, Mexico
- Department of Physics and Astronomy, Texas Tech University, Lubbock, Texas 79409-1051, USA
| | - T Weisgarber
- Department of Physics, University of Wisconsin-Madison, Madison, Wisconsin 53706, USA
| | - G Yodh
- Department of Physics and Astronomy, University of California, Irvine, Irvine, California 92697, USA
| | - A Zepeda
- Physics Department, Centro de Investigacion y de Estudios Avanzados del IPN, Mexico City 07360, Mexico
| | - H Zhou
- Physics Division, Los Alamos National Laboratory, Los Alamos, New Mexico 87545, USA
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Abeysekara AU, Albert A, Alfaro R, Angeles Camacho JR, Arteaga-Velázquez JC, Arunbabu KP, Avila Rojas D, Ayala Solares HA, Baghmanyan V, Belmont-Moreno E, BenZvi SY, Brisbois C, Caballero-Mora KS, Capistrán T, Carramiñana A, Casanova S, Cotti U, Cotzomi J, Coutiño de León S, De la Fuente E, de León C, Dichiara S, Dingus BL, DuVernois MA, Díaz-Vélez JC, Ellsworth RW, Engel K, Espinoza C, Fleischhack H, Fraija N, Galván-Gámez A, Garcia D, García-González JA, Garfias F, González MM, Goodman JA, Harding JP, Hernandez S, Hinton J, Hona B, Huang D, Hueyotl-Zahuantitla F, Hüntemeyer P, Iriarte A, Jardin-Blicq A, Joshi V, Kaufmann S, Kieda D, Lara A, Lee WH, León Vargas H, Linnemann JT, Longinotti AL, Luis-Raya G, Lundeen J, López-Coto R, Malone K, Marinelli SS, Martinez O, Martinez-Castellanos I, Martínez-Castro J, Martínez-Huerta H, Matthews JA, Miranda-Romagnoli P, Morales-Soto JA, Moreno E, Mostafá M, Nayerhoda A, Nellen L, Newbold M, Nisa MU, Noriega-Papaqui R, Peisker A, Pérez-Pérez EG, Pretz J, Ren Z, Rho CD, Rivière C, Rosa-González D, Rosenberg M, Ruiz-Velasco E, Salesa Greus F, Sandoval A, Schneider M, Schoorlemmer H, Sinnis G, Smith AJ, Springer RW, Surajbali P, Tabachnick E, Tanner M, Tibolla O, Tollefson K, Torres I, Torres-Escobedo R, Villaseñor L, Weisgarber T, Wood J, Yapici T, Zhang H, Zhou H. Multiple Galactic Sources with Emission Above 56 TeV Detected by HAWC. Phys Rev Lett 2020; 124:021102. [PMID: 32004015 DOI: 10.1103/physrevlett.124.021102] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/18/2019] [Revised: 11/21/2019] [Indexed: 06/10/2023]
Abstract
We present the first catalog of gamma-ray sources emitting above 56 and 100 TeV with data from the High Altitude Water Cherenkov Observatory, a wide field-of-view observatory capable of detecting gamma rays up to a few hundred TeV. Nine sources are observed above 56 TeV, all of which are likely galactic in origin. Three sources continue emitting past 100 TeV, making this the highest-energy gamma-ray source catalog to date. We report the integral flux of each of these objects. We also report spectra for three highest-energy sources and discuss the possibility that they are PeVatrons.
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Affiliation(s)
- A U Abeysekara
- Department of Physics and Astronomy, University of Utah, Salt Lake City, Utah, USA
| | - A Albert
- Physics Division, Los Alamos National Laboratory, Los Alamos, New Mexico, USA
| | - R Alfaro
- Instituto de Física, Universidad Nacional Autónoma de México, Ciudad de Mexico, Mexico
| | - J R Angeles Camacho
- Instituto de Física, Universidad Nacional Autónoma de México, Ciudad de Mexico, Mexico
| | | | - K P Arunbabu
- Instituto de Geofísica, Universidad Nacional Autónoma de México, Ciudad de Mexico, Mexico
| | - D Avila Rojas
- Instituto de Física, Universidad Nacional Autónoma de México, Ciudad de Mexico, Mexico
| | - H A Ayala Solares
- Department of Physics, Pennsylvania State University, University Park, Pennsylvania, USA
| | - V Baghmanyan
- Institute of Nuclear Physics Polish Academy of Sciences, IFJ-PAN, Krakow, Poland
| | - E Belmont-Moreno
- Instituto de Física, Universidad Nacional Autónoma de México, Ciudad de Mexico, Mexico
| | - S Y BenZvi
- Department of Physics & Astronomy, University of Rochester, Rochester, New York, USA
| | - C Brisbois
- Department of Physics, University of Maryland, College Park, Maryland, USA
| | | | - T Capistrán
- Instituto Nacional de Astrofísica, Óptica y Electrónica, Puebla, Mexico
| | - A Carramiñana
- Instituto Nacional de Astrofísica, Óptica y Electrónica, Puebla, Mexico
| | - S Casanova
- Institute of Nuclear Physics Polish Academy of Sciences, IFJ-PAN, Krakow, Poland
| | - U Cotti
- Universidad Michoacana de San Nicolás de Hidalgo, Morelia, Mexico
| | - J Cotzomi
- Facultad de Ciencias Físico Matemáticas, Benemérita Universidad Autónoma de Puebla, Puebla, Mexico
| | - S Coutiño de León
- Instituto Nacional de Astrofísica, Óptica y Electrónica, Puebla, Mexico
| | - E De la Fuente
- Departamento de Física, Centro Universitario de Ciencias Exactase Ingenierias, Universidad de Guadalajara, Guadalajara, Mexico
- Department of Physics and Astronomy, Texas Tech University, Lubbock, Texas, USA
| | - C de León
- Universidad Michoacana de San Nicolás de Hidalgo, Morelia, Mexico
| | - S Dichiara
- Instituto de Astronomía, Universidad Nacional Autónoma de México, Ciudad de Mexico, Mexico
| | - B L Dingus
- Physics Division, Los Alamos National Laboratory, Los Alamos, New Mexico, USA
| | - M A DuVernois
- Department of Physics, University of Wisconsin-Madison, Madison, Wisconsin, USA
| | - J C Díaz-Vélez
- Departamento de Física, Centro Universitario de Ciencias Exactase Ingenierias, Universidad de Guadalajara, Guadalajara, Mexico
- Department of Physics and Astronomy, Texas Tech University, Lubbock, Texas, USA
| | - R W Ellsworth
- Department of Physics, University of Maryland, College Park, Maryland, USA
| | - K Engel
- Department of Physics, University of Maryland, College Park, Maryland, USA
| | - C Espinoza
- Instituto de Física, Universidad Nacional Autónoma de México, Ciudad de Mexico, Mexico
| | - H Fleischhack
- Department of Physics, Michigan Technological University, Houghton, Michigan, USA
| | - N Fraija
- Instituto de Astronomía, Universidad Nacional Autónoma de México, Ciudad de Mexico, Mexico
| | - A Galván-Gámez
- Instituto de Astronomía, Universidad Nacional Autónoma de México, Ciudad de Mexico, Mexico
| | - D Garcia
- Instituto de Física, Universidad Nacional Autónoma de México, Ciudad de Mexico, Mexico
| | - J A García-González
- Instituto de Física, Universidad Nacional Autónoma de México, Ciudad de Mexico, Mexico
| | - F Garfias
- Instituto de Astronomía, Universidad Nacional Autónoma de México, Ciudad de Mexico, Mexico
| | - M M González
- Instituto de Astronomía, Universidad Nacional Autónoma de México, Ciudad de Mexico, Mexico
| | - J A Goodman
- Department of Physics, University of Maryland, College Park, Maryland, USA
| | - J P Harding
- Physics Division, Los Alamos National Laboratory, Los Alamos, New Mexico, USA
| | - S Hernandez
- Instituto de Física, Universidad Nacional Autónoma de México, Ciudad de Mexico, Mexico
| | - J Hinton
- Max-Planck Institute for Nuclear Physics, Heidelberg, Germany
| | - B Hona
- Department of Physics, Michigan Technological University, Houghton, Michigan, USA
| | - D Huang
- Department of Physics, Michigan Technological University, Houghton, Michigan, USA
| | | | - P Hüntemeyer
- Department of Physics, Michigan Technological University, Houghton, Michigan, USA
| | - A Iriarte
- Instituto de Astronomía, Universidad Nacional Autónoma de México, Ciudad de Mexico, Mexico
| | - A Jardin-Blicq
- Max-Planck Institute for Nuclear Physics, Heidelberg, Germany
| | - V Joshi
- Erlangen Centre for Astroparticle Physics, Friedrich-Alexander-Universität Erlangen-Nürnberg, Erlangen, Germany
| | - S Kaufmann
- Universidad Politecnica de Pachuca, Pachuca, Hgo, Mexico
| | - D Kieda
- Department of Physics and Astronomy, University of Utah, Salt Lake City, Utah, USA
| | - A Lara
- Instituto de Geofísica, Universidad Nacional Autónoma de México, Ciudad de Mexico, Mexico
| | - W H Lee
- Instituto de Astronomía, Universidad Nacional Autónoma de México, Ciudad de Mexico, Mexico
| | - H León Vargas
- Instituto de Física, Universidad Nacional Autónoma de México, Ciudad de Mexico, Mexico
| | - J T Linnemann
- Department of Physics and Astronomy, Michigan State University, East Lansing, Michigan, USA
| | - A L Longinotti
- Instituto Nacional de Astrofísica, Óptica y Electrónica, Puebla, Mexico
| | - G Luis-Raya
- Universidad Politecnica de Pachuca, Pachuca, Hgo, Mexico
| | - J Lundeen
- Department of Physics and Astronomy, Michigan State University, East Lansing, Michigan, USA
| | - R López-Coto
- INFN and Universita di Padova, via Marzolo 8, Padova, Italy
| | - K Malone
- Physics Division, Los Alamos National Laboratory, Los Alamos, New Mexico, USA
- Department of Physics, Pennsylvania State University, University Park, Pennsylvania, USA
| | - S S Marinelli
- Department of Physics and Astronomy, Michigan State University, East Lansing, Michigan, USA
| | - O Martinez
- Facultad de Ciencias Físico Matemáticas, Benemérita Universidad Autónoma de Puebla, Puebla, Mexico
| | | | - J Martínez-Castro
- Centro de Investigación en Computación, Instituto Politécnico Nacional, México City, México
| | - H Martínez-Huerta
- Instituto de Física de São Carlos, Universidade de São Paulo, São Carlos, São Paulo, Brasil
| | - J A Matthews
- Dept of Physics and Astronomy, University of New Mexico, Albuquerque, New Mexico, USA
| | | | - J A Morales-Soto
- Universidad Michoacana de San Nicolás de Hidalgo, Morelia, Mexico
| | - E Moreno
- Facultad de Ciencias Físico Matemáticas, Benemérita Universidad Autónoma de Puebla, Puebla, Mexico
| | - M Mostafá
- Department of Physics, Pennsylvania State University, University Park, Pennsylvania, USA
| | - A Nayerhoda
- Institute of Nuclear Physics Polish Academy of Sciences, IFJ-PAN, Krakow, Poland
| | - L Nellen
- Instituto de Ciencias Nucleares, Universidad Nacional Autónoma de Mexico, Ciudad de Mexico, Mexico
| | - M Newbold
- Department of Physics and Astronomy, University of Utah, Salt Lake City, Utah, USA
| | - M U Nisa
- Department of Physics and Astronomy, Michigan State University, East Lansing, Michigan, USA
| | | | - A Peisker
- Department of Physics and Astronomy, Michigan State University, East Lansing, Michigan, USA
| | | | - J Pretz
- Department of Physics, Pennsylvania State University, University Park, Pennsylvania, USA
| | - Z Ren
- Dept of Physics and Astronomy, University of New Mexico, Albuquerque, New Mexico, USA
| | - C D Rho
- Department of Physics & Astronomy, University of Rochester, Rochester, New York, USA
| | - C Rivière
- Department of Physics, University of Maryland, College Park, Maryland, USA
| | - D Rosa-González
- Instituto Nacional de Astrofísica, Óptica y Electrónica, Puebla, Mexico
| | - M Rosenberg
- Department of Physics, Pennsylvania State University, University Park, Pennsylvania, USA
| | - E Ruiz-Velasco
- Max-Planck Institute for Nuclear Physics, Heidelberg, Germany
| | - F Salesa Greus
- Institute of Nuclear Physics Polish Academy of Sciences, IFJ-PAN, Krakow, Poland
| | - A Sandoval
- Instituto de Física, Universidad Nacional Autónoma de México, Ciudad de Mexico, Mexico
| | - M Schneider
- Department of Physics, University of Maryland, College Park, Maryland, USA
| | - H Schoorlemmer
- Max-Planck Institute for Nuclear Physics, Heidelberg, Germany
| | - G Sinnis
- Physics Division, Los Alamos National Laboratory, Los Alamos, New Mexico, USA
| | - A J Smith
- Department of Physics, University of Maryland, College Park, Maryland, USA
| | - R W Springer
- Department of Physics and Astronomy, University of Utah, Salt Lake City, Utah, USA
| | - P Surajbali
- Max-Planck Institute for Nuclear Physics, Heidelberg, Germany
| | - E Tabachnick
- Department of Physics, University of Maryland, College Park, Maryland, USA
| | - M Tanner
- Department of Physics, Pennsylvania State University, University Park, Pennsylvania, USA
| | - O Tibolla
- Universidad Politecnica de Pachuca, Pachuca, Hgo, Mexico
| | - K Tollefson
- Department of Physics and Astronomy, Michigan State University, East Lansing, Michigan, USA
| | - I Torres
- Instituto Nacional de Astrofísica, Óptica y Electrónica, Puebla, Mexico
| | - R Torres-Escobedo
- Departamento de Física, Centro Universitario de Ciencias Exactase Ingenierias, Universidad de Guadalajara, Guadalajara, Mexico
- Department of Physics and Astronomy, Texas Tech University, Lubbock, Texas, USA
| | - L Villaseñor
- Facultad de Ciencias Físico Matemáticas, Benemérita Universidad Autónoma de Puebla, Puebla, Mexico
| | - T Weisgarber
- Department of Physics, University of Wisconsin-Madison, Madison, Wisconsin, USA
| | - J Wood
- NASA Marshall Space Flight Center, Hunstville, Alabama, USA
| | - T Yapici
- Department of Physics & Astronomy, University of Rochester, Rochester, New York, USA
| | - H Zhang
- Department of Physics and Astronomy, Purdue University, West Lafayette, Indiana, USA
| | - H Zhou
- Physics Division, Los Alamos National Laboratory, Los Alamos, New Mexico, USA
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12
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Abeysekara AU, Albert A, Alfaro R, Alvarez C, Álvarez JD, Arceo R, Arteaga-Velázquez JC, Avila Rojas D, Ayala Solares HA, Belmont-Moreno E, BenZvi SY, Brisbois C, Caballero-Mora KS, Capistrán T, Carramiñana A, Casanova S, Castillo M, Cotti U, Cotzomi J, Coutiño de León S, De León C, De la Fuente E, Díaz-Vélez JC, Dichiara S, Dingus BL, DuVernois MA, Ellsworth RW, Engel K, Espinoza C, Fang K, Fleischhack H, Fraija N, Galván-Gámez A, García-González JA, Garfias F, González-Muñoz A, González MM, Goodman JA, Hampel-Arias Z, Harding JP, Hernandez S, Hinton J, Hona B, Hueyotl-Zahuantitla F, Hui CM, Hüntemeyer P, Iriarte A, Jardin-Blicq A, Joshi V, Kaufmann S, Kar P, Kunde GJ, Lauer RJ, Lee WH, León Vargas H, Li H, Linnemann JT, Longinotti AL, Luis-Raya G, López-Coto R, Malone K, Marinelli SS, Martinez O, Martinez-Castellanos I, Martínez-Castro J, Matthews JA, Miranda-Romagnoli P, Moreno E, Mostafá M, Nayerhoda A, Nellen L, Newbold M, Nisa MU, Noriega-Papaqui R, Pretz J, Pérez-Pérez EG, Ren Z, Rho CD, Rivière C, Rosa-González D, Rosenberg M, Ruiz-Velasco E, Salesa Greus F, Sandoval A, Schneider M, Schoorlemmer H, Seglar Arroyo M, Sinnis G, Smith AJ, Springer RW, Surajbali P, Taboada I, Tibolla O, Tollefson K, Torres I, Vianello G, Villaseñor L, Weisgarber T, Werner F, Westerhoff S, Wood J, Yapici T, Yodh G, Zepeda A, Zhang H, Zhou H. Publisher Correction: Very-high-energy particle acceleration powered by the jets of the microquasar SS 433. Nature 2018; 564:E38. [PMID: 30482938 DOI: 10.1038/s41586-018-0688-8] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Abstract
In this Letter, owing to a production error, the penultimate version of the PDF was published. The HTML version was always correct. The PDF has been corrected online.
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Affiliation(s)
- A U Abeysekara
- Department of Physics and Astronomy, University of Utah, Salt Lake City, UT, USA
| | - A Albert
- Physics and Theoretical Divisions, Los Alamos National Laboratory, Los Alamos, NM, USA
| | - R Alfaro
- Instituto de Física, Universidad Nacional Autónoma de México, Mexico City, Mexico
| | - C Alvarez
- Universidad Autónoma de Chiapas, Tuxtla Gutiérrez, Mexico
| | - J D Álvarez
- Universidad Michoacana de San Nicolás de Hidalgo, Morelia, Mexico
| | - R Arceo
- Universidad Autónoma de Chiapas, Tuxtla Gutiérrez, Mexico
| | | | - D Avila Rojas
- Instituto de Física, Universidad Nacional Autónoma de México, Mexico City, Mexico
| | - H A Ayala Solares
- Department of Physics, Pennsylvania State University, University Park, PA, USA
| | - E Belmont-Moreno
- Instituto de Física, Universidad Nacional Autónoma de México, Mexico City, Mexico
| | - S Y BenZvi
- Department of Physics and Astronomy, University of Rochester, Rochester, NY, USA
| | - C Brisbois
- Department of Physics, Michigan Technological University, Houghton, MI, USA
| | | | - T Capistrán
- Instituto Nacional de Astrofísica, Óptica y Electrónica, Puebla, Mexico
| | - A Carramiñana
- Instituto Nacional de Astrofísica, Óptica y Electrónica, Puebla, Mexico
| | - S Casanova
- Institute of Nuclear Physics Polish Academy of Sciences, IFJ-PAN, Krakow, Poland.,Max-Planck Institute for Nuclear Physics, Heidelberg, Germany
| | - M Castillo
- Universidad Michoacana de San Nicolás de Hidalgo, Morelia, Mexico
| | - U Cotti
- Universidad Michoacana de San Nicolás de Hidalgo, Morelia, Mexico
| | - J Cotzomi
- Facultad de Ciencias Físico Matemáticas, Benemérita Universidad Autónoma de Puebla, Puebla, Mexico
| | - S Coutiño de León
- Instituto Nacional de Astrofísica, Óptica y Electrónica, Puebla, Mexico
| | - C De León
- Facultad de Ciencias Físico Matemáticas, Benemérita Universidad Autónoma de Puebla, Puebla, Mexico
| | - E De la Fuente
- Departamento de Física, Centro Universitario de Ciencias Exactas e Ingenierías, Universidad de Guadalajara, Guadalajara, Mexico
| | - J C Díaz-Vélez
- Departamento de Física, Centro Universitario de Ciencias Exactas e Ingenierías, Universidad de Guadalajara, Guadalajara, Mexico.,Department of Physics and Wisconsin IceCube Particle Astrophysics Center, University of Wisconsin-Madison, Madison, WI, USA
| | - S Dichiara
- Instituto de Astronomía, Universidad Nacional Autónoma de México, Mexico City, Mexico
| | - B L Dingus
- Physics and Theoretical Divisions, Los Alamos National Laboratory, Los Alamos, NM, USA
| | - M A DuVernois
- Department of Physics and Wisconsin IceCube Particle Astrophysics Center, University of Wisconsin-Madison, Madison, WI, USA
| | - R W Ellsworth
- School of Physics, Astronomy, and Computational Sciences, George Mason University, Fairfax, VA, USA
| | - K Engel
- Department of Physics, University of Maryland, College Park, MD, USA
| | - C Espinoza
- Instituto de Física, Universidad Nacional Autónoma de México, Mexico City, Mexico
| | - K Fang
- Department of Astronomy, University of Maryland, College Park, MD, USA.,Joint Space-Science Institute, University of Maryland, College Park, MD, USA
| | - H Fleischhack
- Department of Physics, Michigan Technological University, Houghton, MI, USA
| | - N Fraija
- Instituto de Astronomía, Universidad Nacional Autónoma de México, Mexico City, Mexico
| | - A Galván-Gámez
- Instituto de Astronomía, Universidad Nacional Autónoma de México, Mexico City, Mexico
| | - J A García-González
- Instituto de Física, Universidad Nacional Autónoma de México, Mexico City, Mexico
| | - F Garfias
- Instituto de Astronomía, Universidad Nacional Autónoma de México, Mexico City, Mexico
| | - A González-Muñoz
- Departamento de Física, Centro Universitario de Ciencias Exactas e Ingenierías, Universidad de Guadalajara, Guadalajara, Mexico
| | - M M González
- Instituto de Astronomía, Universidad Nacional Autónoma de México, Mexico City, Mexico
| | - J A Goodman
- Department of Physics, University of Maryland, College Park, MD, USA
| | - Z Hampel-Arias
- Department of Physics and Wisconsin IceCube Particle Astrophysics Center, University of Wisconsin-Madison, Madison, WI, USA.,Inter-university Institute for High Energies, Université Libre de Bruxelles, Brussels, Belgium
| | - J P Harding
- Physics and Theoretical Divisions, Los Alamos National Laboratory, Los Alamos, NM, USA
| | - S Hernandez
- Instituto de Física, Universidad Nacional Autónoma de México, Mexico City, Mexico
| | - J Hinton
- Max-Planck Institute for Nuclear Physics, Heidelberg, Germany
| | - B Hona
- Department of Physics, Michigan Technological University, Houghton, MI, USA
| | | | - C M Hui
- NASA Marshall Space Flight Center, Astrophysics Office, Huntsville, AL, USA
| | - P Hüntemeyer
- Department of Physics, Michigan Technological University, Houghton, MI, USA
| | - A Iriarte
- Instituto de Astronomía, Universidad Nacional Autónoma de México, Mexico City, Mexico
| | - A Jardin-Blicq
- Max-Planck Institute for Nuclear Physics, Heidelberg, Germany
| | - V Joshi
- Max-Planck Institute for Nuclear Physics, Heidelberg, Germany
| | - S Kaufmann
- Universidad Autónoma de Chiapas, Tuxtla Gutiérrez, Mexico
| | - P Kar
- Department of Physics and Astronomy, University of Utah, Salt Lake City, UT, USA
| | - G J Kunde
- Physics and Theoretical Divisions, Los Alamos National Laboratory, Los Alamos, NM, USA
| | - R J Lauer
- Department of Physics and Astronomy, University of New Mexico, Albuquerque, NM, USA
| | - W H Lee
- Instituto de Astronomía, Universidad Nacional Autónoma de México, Mexico City, Mexico
| | - H León Vargas
- Instituto de Física, Universidad Nacional Autónoma de México, Mexico City, Mexico
| | - H Li
- Physics and Theoretical Divisions, Los Alamos National Laboratory, Los Alamos, NM, USA
| | - J T Linnemann
- Department of Physics and Astronomy, Michigan State University, East Lansing, MI, USA
| | - A L Longinotti
- Instituto Nacional de Astrofísica, Óptica y Electrónica, Puebla, Mexico
| | - G Luis-Raya
- Universidad Politecnica de Pachuca, Pachuca, Mexico
| | | | - K Malone
- Department of Physics, Pennsylvania State University, University Park, PA, USA
| | - S S Marinelli
- Department of Physics and Astronomy, Michigan State University, East Lansing, MI, USA
| | - O Martinez
- Facultad de Ciencias Físico Matemáticas, Benemérita Universidad Autónoma de Puebla, Puebla, Mexico
| | | | - J Martínez-Castro
- Centro de Investigación en Computación, Instituto Politécnico Nacional, Mexico City, Mexico
| | - J A Matthews
- Department of Physics and Astronomy, University of New Mexico, Albuquerque, NM, USA
| | | | - E Moreno
- Facultad de Ciencias Físico Matemáticas, Benemérita Universidad Autónoma de Puebla, Puebla, Mexico
| | - M Mostafá
- Department of Physics, Pennsylvania State University, University Park, PA, USA
| | - A Nayerhoda
- Institute of Nuclear Physics Polish Academy of Sciences, IFJ-PAN, Krakow, Poland
| | - L Nellen
- Instituto de Ciencias Nucleares, Universidad Nacional Autónoma de Mexico, Mexico City, Mexico
| | - M Newbold
- Department of Physics and Astronomy, University of Utah, Salt Lake City, UT, USA
| | - M U Nisa
- Department of Physics and Astronomy, University of Rochester, Rochester, NY, USA
| | | | - J Pretz
- Department of Physics, Pennsylvania State University, University Park, PA, USA
| | | | - Z Ren
- Department of Physics and Astronomy, University of New Mexico, Albuquerque, NM, USA
| | - C D Rho
- Department of Physics and Astronomy, University of Rochester, Rochester, NY, USA.
| | - C Rivière
- Department of Physics, University of Maryland, College Park, MD, USA
| | - D Rosa-González
- Instituto Nacional de Astrofísica, Óptica y Electrónica, Puebla, Mexico
| | - M Rosenberg
- Department of Physics, Pennsylvania State University, University Park, PA, USA
| | - E Ruiz-Velasco
- Max-Planck Institute for Nuclear Physics, Heidelberg, Germany
| | - F Salesa Greus
- Institute of Nuclear Physics Polish Academy of Sciences, IFJ-PAN, Krakow, Poland
| | - A Sandoval
- Instituto de Física, Universidad Nacional Autónoma de México, Mexico City, Mexico
| | - M Schneider
- Santa Cruz Institute for Particle Physics, University of California, Santa Cruz, Santa Cruz, CA, USA
| | - H Schoorlemmer
- Max-Planck Institute for Nuclear Physics, Heidelberg, Germany
| | - M Seglar Arroyo
- Department of Physics, Pennsylvania State University, University Park, PA, USA
| | - G Sinnis
- Physics and Theoretical Divisions, Los Alamos National Laboratory, Los Alamos, NM, USA
| | - A J Smith
- Department of Physics, University of Maryland, College Park, MD, USA
| | - R W Springer
- Department of Physics and Astronomy, University of Utah, Salt Lake City, UT, USA
| | - P Surajbali
- Max-Planck Institute for Nuclear Physics, Heidelberg, Germany
| | - I Taboada
- School of Physics and Center for Relativistic Astrophysics, Georgia Institute of Technology, Atlanta, GA, USA
| | - O Tibolla
- Universidad Autónoma de Chiapas, Tuxtla Gutiérrez, Mexico
| | - K Tollefson
- Department of Physics and Astronomy, Michigan State University, East Lansing, MI, USA
| | - I Torres
- Instituto Nacional de Astrofísica, Óptica y Electrónica, Puebla, Mexico
| | - G Vianello
- Department of Physics, Stanford University, Stanford, CA, USA
| | - L Villaseñor
- Facultad de Ciencias Físico Matemáticas, Benemérita Universidad Autónoma de Puebla, Puebla, Mexico
| | - T Weisgarber
- Department of Physics and Wisconsin IceCube Particle Astrophysics Center, University of Wisconsin-Madison, Madison, WI, USA
| | - F Werner
- Max-Planck Institute for Nuclear Physics, Heidelberg, Germany
| | - S Westerhoff
- Department of Physics and Wisconsin IceCube Particle Astrophysics Center, University of Wisconsin-Madison, Madison, WI, USA
| | - J Wood
- Department of Physics and Wisconsin IceCube Particle Astrophysics Center, University of Wisconsin-Madison, Madison, WI, USA
| | - T Yapici
- Department of Physics and Astronomy, University of Rochester, Rochester, NY, USA
| | - G Yodh
- Department of Physics and Astronomy, University of California, Irvine, Irvine, CA, USA
| | - A Zepeda
- Universidad Autónoma de Chiapas, Tuxtla Gutiérrez, Mexico.,Physics Department, Centro de Investigación y de Estudios Avanzados del IPN, Mexico City, Mexico
| | - H Zhang
- Department of Physics and Astronomy, Purdue University, West Lafayette, IN, USA
| | - H Zhou
- Physics and Theoretical Divisions, Los Alamos National Laboratory, Los Alamos, NM, USA.
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Engel K, Sauer J, Jünemann S, Winkler A, Wibberg D, Kalinowski J, Tauch A, Caspers BA. Individual- and Species-Specific Skin Microbiomes in Three Different Estrildid Finch Species Revealed by 16S Amplicon Sequencing. Microb Ecol 2018; 76:518-529. [PMID: 29282519 DOI: 10.1007/s00248-017-1130-8] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/13/2017] [Accepted: 12/12/2017] [Indexed: 05/16/2023]
Abstract
An animals' body is densely populated with bacteria. Although a large number of investigations on physiological microbial colonisation have emerged in recent years, our understanding of the composition, ecology and function of the microbiota remains incomplete. Here, we investigated whether songbirds have an individual-specific skin microbiome that is similar across different body regions. We collected skin microbe samples from three different bird species (Taeniopygia gutatta, Lonchura striata domestica and Stagonopleura gutatta) at two body locations (neck region, preen gland area). To characterise the skin microbes and compare the bacterial composition, we used high-throughput 16S rRNA amplicon sequencing. This method proved suitable for identifying the skin microbiome of birds, even though the bacterial load on the skin appeared to be relatively low. We found that across all species, the two evaluated skin areas of each individual harboured very similar microbial communities, indicative of an individual-specific skin microbiome. Despite experiencing the same environmental conditions and consuming the same diet, significant differences in the skin microbe composition were identified among the three species. The bird species differed both quantitatively and qualitatively regarding the observed bacterial taxa. Although each species harboured its own unique set of skin microbes, we identified a core skin microbiome among the studied species. As microbes are known to influence the host's body odour, our findings of an individual-specific skin microbiome might suggest that the skin microbiome in birds is involved in the odour production and could encode information on the host's genotype.
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Affiliation(s)
- Kathrin Engel
- Department of Animal Behaviour, Research Group Chemical Signalling, Bielefeld University, Konsequenz 45, 33615, Bielefeld, Germany.
| | - Jan Sauer
- Department of Animal Behaviour, Research Group Chemical Signalling, Bielefeld University, Konsequenz 45, 33615, Bielefeld, Germany.
| | - Sebastian Jünemann
- Center for Biotechnology (CeBiTec), Bielefeld University, Sequenz 1, 33615, Bielefeld, Germany
- Faculty of Technology, Bielefeld University, Universitätsstraße 25, 33615, Bielefeld, Germany
| | - Anika Winkler
- Center for Biotechnology (CeBiTec), Bielefeld University, Sequenz 1, 33615, Bielefeld, Germany
| | - Daniel Wibberg
- Center for Biotechnology (CeBiTec), Bielefeld University, Sequenz 1, 33615, Bielefeld, Germany
| | - Jörn Kalinowski
- Center for Biotechnology (CeBiTec), Bielefeld University, Sequenz 1, 33615, Bielefeld, Germany
| | - Andreas Tauch
- Center for Biotechnology (CeBiTec), Bielefeld University, Sequenz 1, 33615, Bielefeld, Germany
| | - Barbara A Caspers
- Department of Animal Behaviour, Research Group Chemical Signalling, Bielefeld University, Konsequenz 45, 33615, Bielefeld, Germany
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14
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Maraci Ö, Engel K, Caspers BA. Olfactory Communication via Microbiota: What Is Known in Birds? Genes (Basel) 2018; 9:E387. [PMID: 30065222 PMCID: PMC6116157 DOI: 10.3390/genes9080387] [Citation(s) in RCA: 27] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/31/2018] [Revised: 07/27/2018] [Accepted: 07/27/2018] [Indexed: 12/11/2022] Open
Abstract
Animal bodies harbour a complex and diverse community of microorganisms and accumulating evidence has revealed that microbes can influence the hosts' behaviour, for example by altering body odours. Microbial communities produce odorant molecules as metabolic by-products and thereby modulate the biochemical signalling profiles of their animal hosts. As the diversity and the relative abundance of microbial species are influenced by several factors including host-specific factors, environmental factors and social interactions, there are substantial individual variations in the composition of microbial communities. In turn, the variations in microbial communities would consequently affect social and communicative behaviour by influencing recognition cues of the hosts. Therefore, microbiota studies have a great potential to expand our understanding of recognition of conspecifics, group members and kin. In this review, we aim to summarize existing knowledge of the factors influencing the microbial communities and the effect of microbiota on olfactory cue production and social and communicative behaviour. We concentrate on avian taxa, yet we also include recent research performed on non-avian species when necessary.
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Affiliation(s)
- Öncü Maraci
- Research Group Chemical Signalling, Department of Animal Behaviour, Bielefeld University, Konsequenz 45, 33615 Bielefeld, Germany.
| | - Kathrin Engel
- Research Group Chemical Signalling, Department of Animal Behaviour, Bielefeld University, Konsequenz 45, 33615 Bielefeld, Germany.
| | - Barbara A Caspers
- Research Group Chemical Signalling, Department of Animal Behaviour, Bielefeld University, Konsequenz 45, 33615 Bielefeld, Germany.
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Abeysekara A, Albert A, Alfaro R, Alvarez C, Álvarez J, Arceo R, Arteaga-Velázquez J, Avila Rojas D, Ayala Solares H, Belmont-Moreno E, BenZvi S, Braun J, Brisbois C, Caballero-Mora K, Capistrán T, Carramiñana A, Casanova S, Castillo M, Cotti U, Cotzomi J, Coutiño de León S, De León C, De la Fuente E, Diaz Hernandez R, Dichiara S, Dingus B, DuVernois M, Ellsworth R, Engel K, Enríquez-Rivera O, Fleischhack H, Fraija N, Galván-Gámez A, García-González J, González Muñoz A, González M, Hampel-Arias Z, Harding J, Hernandez S, Hona B, Hueyotl-Zahuantitla F, Hui C, Hüntemeyer P, Iriarte A, Jardin-Blicq A, Joshi V, Kaufmann S, Lara A, Lee W, León Vargas H, Linnemann J, Longinotti A, Luis-Raya G, Luna-García R, López-Coto R, Malone K, Marinelli S, Martinez O, Martinez-Castellanos I, Martínez-Castro J, Martínez-Huerta H, Matthews J, Miranda-Romagnoli P, Moreno E, Mostafá M, Nellen L, Newbold M, Nisa M, Noriega-Papaqui R, Pelayo R, Pretz J, Pérez-Pérez E, Ren Z, Rho C, Rivière C, Rosa-González D, Rosenberg M, Ruiz-Velasco E, Salesa Greus F, Sandoval A, Schneider M, Schoorlemmer H, Seglar Arroyo M, Sinnis G, Smith A, Springer R, Surajbali P, Taboada I, Tibolla O, Torres I, Villaseñor L, Weisgarber T, Westerhoff S, Wood J, Yapici T, Yodh G, Zepeda A, Zhou H. Constraining the
p¯/p
ratio in TeV cosmic rays with observations of the Moon shadow by HAWC. Int J Clin Exp Med 2018. [DOI: 10.1103/physrevd.97.102005] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
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17
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Abeysekara AU, Albert A, Alfaro R, Alvarez C, Álvarez JD, Arceo R, Arteaga-Velázquez JC, Avila Rojas D, Ayala Solares HA, Barber AS, Bautista-Elivar N, Becerril A, Belmont-Moreno E, BenZvi SY, Berley D, Bernal A, Braun J, Brisbois C, Caballero-Mora KS, Capistrán T, Carramiñana A, Casanova S, Castillo M, Cotti U, Cotzomi J, Coutiño de León S, De León C, De la Fuente E, Dingus BL, DuVernois MA, Díaz-Vélez JC, Ellsworth RW, Engel K, Enríquez-Rivera O, Fiorino DW, Fraija N, García-González JA, Garfias F, Gerhardt M, González Muñoz A, González MM, Goodman JA, Hampel-Arias Z, Harding JP, Hernández S, Hernández-Almada A, Hinton J, Hona B, Hui CM, Hüntemeyer P, Iriarte A, Jardin-Blicq A, Joshi V, Kaufmann S, Kieda D, Lara A, Lauer RJ, Lee WH, Lennarz D, Vargas HL, Linnemann JT, Longinotti AL, Luis Raya G, Luna-García R, López-Coto R, Malone K, Marinelli SS, Martinez O, Martinez-Castellanos I, Martínez-Castro J, Martínez-Huerta H, Matthews JA, Miranda-Romagnoli P, Moreno E, Mostafá M, Nellen L, Newbold M, Nisa MU, Noriega-Papaqui R, Pelayo R, Pretz J, Pérez-Pérez EG, Ren Z, Rho CD, Rivière C, Rosa-González D, Rosenberg M, Ruiz-Velasco E, Salazar H, Salesa Greus F, Sandoval A, Schneider M, Schoorlemmer H, Sinnis G, Smith AJ, Springer RW, Surajbali P, Taboada I, Tibolla O, Tollefson K, Torres I, Ukwatta TN, Vianello G, Weisgarber T, Westerhoff S, Wisher IG, Wood J, Yapici T, Yodh G, Younk PW, Zepeda A, Zhou H, Guo F, Hahn J, Li H, Zhang H. Extended gamma-ray sources around pulsars constrain the origin of the positron flux at Earth. Science 2018; 358:911-914. [PMID: 29146808 DOI: 10.1126/science.aan4880] [Citation(s) in RCA: 211] [Impact Index Per Article: 35.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/20/2017] [Accepted: 10/09/2017] [Indexed: 11/02/2022]
Abstract
The unexpectedly high flux of cosmic-ray positrons detected at Earth may originate from nearby astrophysical sources, dark matter, or unknown processes of cosmic-ray secondary production. We report the detection, using the High-Altitude Water Cherenkov Observatory (HAWC), of extended tera-electron volt gamma-ray emission coincident with the locations of two nearby middle-aged pulsars (Geminga and PSR B0656+14). The HAWC observations demonstrate that these pulsars are indeed local sources of accelerated leptons, but the measured tera-electron volt emission profile constrains the diffusion of particles away from these sources to be much slower than previously assumed. We demonstrate that the leptons emitted by these objects are therefore unlikely to be the origin of the excess positrons, which may have a more exotic origin.
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Affiliation(s)
- A U Abeysekara
- Department of Physics and Astronomy, University of Utah, Salt Lake City, UT, USA
| | - A Albert
- Los Alamos National Laboratory, Los Alamos, NM, USA
| | - R Alfaro
- Instituto de Física, Universidad Nacional Autónoma de México, Mexico City, Mexico
| | - C Alvarez
- Universidad Autónoma de Chiapas, Tuxtla Gutiérrez, Chiapas, Mexico
| | - J D Álvarez
- Universidad Michoacana de San Nicolás de Hidalgo, Morelia, Mexico
| | - R Arceo
- Universidad Autónoma de Chiapas, Tuxtla Gutiérrez, Chiapas, Mexico
| | | | - D Avila Rojas
- Instituto de Física, Universidad Nacional Autónoma de México, Mexico City, Mexico
| | - H A Ayala Solares
- Department of Physics, Michigan Technological University, Houghton, MI, USA
| | - A S Barber
- Department of Physics and Astronomy, University of Utah, Salt Lake City, UT, USA
| | | | - A Becerril
- Instituto de Física, Universidad Nacional Autónoma de México, Mexico City, Mexico
| | - E Belmont-Moreno
- Instituto de Física, Universidad Nacional Autónoma de México, Mexico City, Mexico
| | - S Y BenZvi
- Department of Physics and Astronomy, University of Rochester, Rochester, NY, USA
| | - D Berley
- Department of Physics, University of Maryland, College Park, MD, USA
| | - A Bernal
- Instituto de Astronomía, Universidad Nacional Autónoma de México, Mexico City, Mexico
| | - J Braun
- Department of Physics, University of Wisconsin-Madison, Madison, WI, USA
| | - C Brisbois
- Department of Physics, Michigan Technological University, Houghton, MI, USA
| | | | - T Capistrán
- Instituto Nacional de Astrofísica, Óptica y Electrónica, Puebla, Mexico
| | - A Carramiñana
- Instituto Nacional de Astrofísica, Óptica y Electrónica, Puebla, Mexico
| | - S Casanova
- Institute of Nuclear Physics Polish Academy of Sciences, Krakow, Poland.,Max-Planck Institute for Nuclear Physics, Heidelberg, Germany
| | - M Castillo
- Universidad Michoacana de San Nicolás de Hidalgo, Morelia, Mexico
| | - U Cotti
- Universidad Michoacana de San Nicolás de Hidalgo, Morelia, Mexico
| | - J Cotzomi
- Facultad de Ciencias Físico Matemáticas, Benemérita Universidad Autónoma de Puebla, Puebla, Mexico
| | - S Coutiño de León
- Instituto Nacional de Astrofísica, Óptica y Electrónica, Puebla, Mexico
| | - C De León
- Facultad de Ciencias Físico Matemáticas, Benemérita Universidad Autónoma de Puebla, Puebla, Mexico
| | - E De la Fuente
- Departamento de Física, Centro Universitario de Ciencias Exactas e Ingenierías, Universidad de Guadalajara, Guadalajara, Mexico
| | - B L Dingus
- Los Alamos National Laboratory, Los Alamos, NM, USA
| | - M A DuVernois
- Department of Physics, University of Wisconsin-Madison, Madison, WI, USA
| | - J C Díaz-Vélez
- Departamento de Física, Centro Universitario de Ciencias Exactas e Ingenierías, Universidad de Guadalajara, Guadalajara, Mexico
| | - R W Ellsworth
- School of Physics, Astronomy, and Computational Sciences, George Mason University, Fairfax, VA, USA
| | - K Engel
- Department of Physics, University of Maryland, College Park, MD, USA
| | - O Enríquez-Rivera
- Instituto de Geofísica, Universidad Nacional Autónoma de México, Mexico City, Mexico
| | - D W Fiorino
- Department of Physics, University of Maryland, College Park, MD, USA
| | - N Fraija
- Instituto de Astronomía, Universidad Nacional Autónoma de México, Mexico City, Mexico
| | - J A García-González
- Instituto de Física, Universidad Nacional Autónoma de México, Mexico City, Mexico
| | - F Garfias
- Instituto de Astronomía, Universidad Nacional Autónoma de México, Mexico City, Mexico
| | - M Gerhardt
- Department of Physics, Michigan Technological University, Houghton, MI, USA
| | - A González Muñoz
- Instituto de Física, Universidad Nacional Autónoma de México, Mexico City, Mexico
| | - M M González
- Instituto de Astronomía, Universidad Nacional Autónoma de México, Mexico City, Mexico
| | - J A Goodman
- Department of Physics, University of Maryland, College Park, MD, USA
| | - Z Hampel-Arias
- Department of Physics, University of Wisconsin-Madison, Madison, WI, USA
| | - J P Harding
- Los Alamos National Laboratory, Los Alamos, NM, USA
| | - S Hernández
- Instituto de Física, Universidad Nacional Autónoma de México, Mexico City, Mexico
| | - A Hernández-Almada
- Instituto de Física, Universidad Nacional Autónoma de México, Mexico City, Mexico
| | - J Hinton
- Max-Planck Institute for Nuclear Physics, Heidelberg, Germany
| | - B Hona
- Department of Physics, Michigan Technological University, Houghton, MI, USA
| | - C M Hui
- Astrophysics Office, NASA Marshall Space Flight Center Huntsville, AL, USA
| | - P Hüntemeyer
- Department of Physics, Michigan Technological University, Houghton, MI, USA
| | - A Iriarte
- Instituto de Astronomía, Universidad Nacional Autónoma de México, Mexico City, Mexico
| | - A Jardin-Blicq
- Max-Planck Institute for Nuclear Physics, Heidelberg, Germany
| | - V Joshi
- Max-Planck Institute for Nuclear Physics, Heidelberg, Germany
| | - S Kaufmann
- Universidad Autónoma de Chiapas, Tuxtla Gutiérrez, Chiapas, Mexico
| | - D Kieda
- Department of Physics and Astronomy, University of Utah, Salt Lake City, UT, USA
| | - A Lara
- Instituto de Geofísica, Universidad Nacional Autónoma de México, Mexico City, Mexico
| | - R J Lauer
- Department of Physics and Astronomy, University of New Mexico, Albuquerque, NM, USA
| | - W H Lee
- Instituto de Astronomía, Universidad Nacional Autónoma de México, Mexico City, Mexico
| | - D Lennarz
- School of Physics and Center for Relativistic Astrophysics, Georgia Institute of Technology, Atlanta, GA, USA
| | - H León Vargas
- Instituto de Física, Universidad Nacional Autónoma de México, Mexico City, Mexico
| | - J T Linnemann
- Department of Physics and Astronomy, Michigan State University, East Lansing, MI, USA
| | - A L Longinotti
- Instituto Nacional de Astrofísica, Óptica y Electrónica, Puebla, Mexico
| | - G Luis Raya
- Universidad Politecnica de Pachuca, Pachuca, Hidalgo, Mexico
| | - R Luna-García
- Centro de Investigación en Computación, Instituto Politécnico Nacional, Mexico City, Mexico
| | - R López-Coto
- Max-Planck Institute for Nuclear Physics, Heidelberg, Germany.
| | - K Malone
- Department of Physics, Pennsylvania State University, University Park, PA, USA
| | - S S Marinelli
- Department of Physics and Astronomy, Michigan State University, East Lansing, MI, USA
| | - O Martinez
- Facultad de Ciencias Físico Matemáticas, Benemérita Universidad Autónoma de Puebla, Puebla, Mexico
| | | | - J Martínez-Castro
- Centro de Investigación en Computación, Instituto Politécnico Nacional, Mexico City, Mexico
| | - H Martínez-Huerta
- Physics Department, Centro de Investigacion y de Estudios Avanzados del IPN, Mexico City, Mexico
| | - J A Matthews
- Department of Physics and Astronomy, University of New Mexico, Albuquerque, NM, USA
| | | | - E Moreno
- Facultad de Ciencias Físico Matemáticas, Benemérita Universidad Autónoma de Puebla, Puebla, Mexico
| | - M Mostafá
- Department of Physics, Pennsylvania State University, University Park, PA, USA
| | - L Nellen
- Instituto de Ciencias Nucleares, Universidad Nacional Autónoma de México, Mexico City, Mexico
| | - M Newbold
- Department of Physics and Astronomy, University of Utah, Salt Lake City, UT, USA
| | - M U Nisa
- Department of Physics and Astronomy, University of Rochester, Rochester, NY, USA
| | | | - R Pelayo
- Centro de Investigación en Computación, Instituto Politécnico Nacional, Mexico City, Mexico
| | - J Pretz
- Department of Physics, Pennsylvania State University, University Park, PA, USA
| | - E G Pérez-Pérez
- Universidad Politecnica de Pachuca, Pachuca, Hidalgo, Mexico
| | - Z Ren
- Department of Physics and Astronomy, University of New Mexico, Albuquerque, NM, USA
| | - C D Rho
- Department of Physics and Astronomy, University of Rochester, Rochester, NY, USA
| | - C Rivière
- Department of Physics, University of Maryland, College Park, MD, USA
| | - D Rosa-González
- Instituto Nacional de Astrofísica, Óptica y Electrónica, Puebla, Mexico
| | - M Rosenberg
- Department of Physics, Pennsylvania State University, University Park, PA, USA
| | - E Ruiz-Velasco
- Instituto de Física, Universidad Nacional Autónoma de México, Mexico City, Mexico
| | - H Salazar
- Facultad de Ciencias Físico Matemáticas, Benemérita Universidad Autónoma de Puebla, Puebla, Mexico
| | - F Salesa Greus
- Institute of Nuclear Physics Polish Academy of Sciences, Krakow, Poland.
| | - A Sandoval
- Instituto de Física, Universidad Nacional Autónoma de México, Mexico City, Mexico
| | - M Schneider
- Santa Cruz Institute for Particle Physics, University of California, Santa Cruz, Santa Cruz, CA, USA
| | - H Schoorlemmer
- Max-Planck Institute for Nuclear Physics, Heidelberg, Germany
| | - G Sinnis
- Los Alamos National Laboratory, Los Alamos, NM, USA
| | - A J Smith
- Department of Physics, University of Maryland, College Park, MD, USA
| | - R W Springer
- Department of Physics and Astronomy, University of Utah, Salt Lake City, UT, USA
| | - P Surajbali
- Max-Planck Institute for Nuclear Physics, Heidelberg, Germany
| | - I Taboada
- School of Physics and Center for Relativistic Astrophysics, Georgia Institute of Technology, Atlanta, GA, USA
| | - O Tibolla
- Universidad Autónoma de Chiapas, Tuxtla Gutiérrez, Chiapas, Mexico
| | - K Tollefson
- Department of Physics and Astronomy, Michigan State University, East Lansing, MI, USA
| | - I Torres
- Instituto Nacional de Astrofísica, Óptica y Electrónica, Puebla, Mexico
| | - T N Ukwatta
- Los Alamos National Laboratory, Los Alamos, NM, USA
| | - G Vianello
- Hansen Experimental Physics Laboratory Stanford University, Stanford, CA, USA
| | - T Weisgarber
- Department of Physics, University of Wisconsin-Madison, Madison, WI, USA
| | - S Westerhoff
- Department of Physics, University of Wisconsin-Madison, Madison, WI, USA
| | - I G Wisher
- Department of Physics, University of Wisconsin-Madison, Madison, WI, USA
| | - J Wood
- Department of Physics, University of Wisconsin-Madison, Madison, WI, USA
| | - T Yapici
- Department of Physics and Astronomy, Michigan State University, East Lansing, MI, USA
| | - G Yodh
- Department of Physics and Astronomy, University of California, Irvine, Irvine, CA, USA
| | - P W Younk
- Los Alamos National Laboratory, Los Alamos, NM, USA
| | - A Zepeda
- Physics Department, Centro de Investigacion y de Estudios Avanzados del IPN, Mexico City, Mexico.,Universidad Autónoma de Chiapas, Tuxtla Gutiérrez, Chiapas, Mexico
| | - H Zhou
- Los Alamos National Laboratory, Los Alamos, NM, USA.
| | - F Guo
- Los Alamos National Laboratory, Los Alamos, NM, USA
| | - J Hahn
- Max-Planck Institute for Nuclear Physics, Heidelberg, Germany
| | - H Li
- Los Alamos National Laboratory, Los Alamos, NM, USA
| | - H Zhang
- Los Alamos National Laboratory, Los Alamos, NM, USA
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18
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Abstract
Summary
Objectives:
To meet the challenge for high quality and efficient care, highly specialized and distributed healthcare establishments have to communicate and co-operate in a semantically interoperable way. Information and communication technology must be open, flexible, scalable, knowledge-based and service-oriented as well as secure and safe.
Methods:
For enabling semantic interoperability, a unified process for defining and implementing the architecture, i.e. structure and functions of the cooperating systems’ components, as well as the approach for knowledge representation, i.e. the used information and its interpretation, algorithms, etc. have to be defined in a harmonized way. Deploying the Generic Component Model, systems and their components, underlying concepts and applied constraints must be formally modeled, strictly separating platform-independent from platform-specific models.
Results:
As HL7 Version 3 claims to represent the most successful standard for semantic interoperability, HL7 has been analyzed regarding the requirements for model-driven, service-oriented design of semantic interoperable information systems, thereby moving from a communication to an architecture paradigm. The approach is compared with advanced architectural approaches for information systems such as OMG’s CORBA 3 or EHR systems such as GEHR/openEHR and CEN EN 13606 Electronic Health Record Communication.
Conclusion:
HL7 Version 3 is maturing towards an architectural approach for semantic interoperability. Despite current differences, there is a close collaboration between the teams involved guaranteeing a convergence between competing approaches.
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19
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Matthies C, Lilla N, Engel K, Hummel M, Nickl R, Solymosi L, Ernestus RI. Contrast-Enhanced CISS MRI Improves Visualization and Planning in Vestibular Schwannomas. Skull Base Surg 2018. [DOI: 10.1055/s-0038-1633503] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/28/2022]
Affiliation(s)
- Cordula Matthies
- Department of Neurosurgery, Wuerzburg University Hospital, Wuerzburg, Germany
| | - Nadine Lilla
- Department of Neurosurgery, Wuerzburg University Hospital, Wuerzburg, Germany
| | - Kathrin Engel
- Department of Neurosurgery, Wuerzburg University Hospital, Wuerzburg, Germany
| | - Maria Hummel
- Department of Neurosurgery, Wuerzburg University Hospital, Wuerzburg, Germany
| | - Robert Nickl
- Department of Neurosurgery, Wuerzburg University Hospital, Wuerzburg, Germany
| | - Laszlo Solymosi
- Center of Neuroradiology, Wuerzburg University Hospital, Wuerzburg, Germany
| | - Ralf-Ingo Ernestus
- Department of Neurosurgery, Wuerzburg University Hospital, Wuerzburg, Germany
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20
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Krause ET, Bischof HJ, Engel K, Golüke S, Maraci Ö, Mayer U, Sauer J, Caspers BA. Olfaction in the Zebra Finch ( Taeniopygia guttata ): What Is Known and Further Perspectives. Advances in the Study of Behavior 2018. [DOI: 10.1016/bs.asb.2017.11.001] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
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21
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Kurz S, Thieme R, Amberg R, Groth M, Jahnke HG, Pieroh P, Horn LC, Kolb M, Huse K, Platzer M, Volke D, Dehghani F, Buzdin A, Engel K, Robitzki A, Hoffmann R, Gockel I, Birkenmeier G. The anti-tumorigenic activity of A2M-A lesson from the naked mole-rat. PLoS One 2017; 12:e0189514. [PMID: 29281661 PMCID: PMC5744951 DOI: 10.1371/journal.pone.0189514] [Citation(s) in RCA: 32] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/25/2017] [Accepted: 11/28/2017] [Indexed: 12/30/2022] Open
Abstract
Cancer resistance is a major cause for longevity of the naked mole-rat. Recent liver transcriptome analysis in this animal compared to wild-derived mice revealed higher expression of alpha2-macroglobulin (A2M) and cell adhesion molecules, which contribute to the naked mole-rat’s cancer resistance. Notably, A2M is known to dramatically decrease with age in humans. We hypothesize that this might facilitate tumour development. Here we found that A2M modulates tumour cell adhesion, migration and growth by inhibition of tumour promoting signalling pathways, e.g. PI3K / AKT, SMAD and up-regulated PTEN via down-regulation of miR-21, in vitro and in tumour xenografts. A2M increases the expression of CD29 and CD44 but did not evoke EMT. Transcriptome analysis of A2M-treated tumour cells, xenografts and mouse liver demonstrated a multifaceted regulation of tumour promoting signalling pathways indicating a less tumorigenic environment mediated by A2M. By virtue of these multiple actions the naturally occurring A2M has strong potential as a novel therapeutic agent.
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Affiliation(s)
- Susanne Kurz
- Institute of Biochemistry, University of Leipzig, Medical Faculty, Leipzig, Germany
| | - René Thieme
- Department of Visceral, Transplantation, Thoracic and Vascular Surgery, University of Leipzig, Medical Faculty, Leipzig, Germany
| | - Ronny Amberg
- Institute of Biochemistry, University of Leipzig, Medical Faculty, Leipzig, Germany
| | - Marco Groth
- Leibniz Institute on Aging—Fritz Lipmann Institute (FLI), Jena, Germany
| | - Heinz-Georg Jahnke
- Centre for Biotechnology and Biomedicine, Molecular Biological-Biochemical Processing Technology, University of Leipzig, Germany
| | - Philipp Pieroh
- Department of Anatomy and Cell Biology, Martin Luther University Halle-Wittenberg, Grosse Steinstrasse 52, Halle (Saale), Germany
| | - Lars-Christian Horn
- Institute of Pathology, Division of Breast, Gynaecological and Perinatal Pathology, University of Leipzig, Leipzig, Germany
| | - Marlen Kolb
- Institute of Biochemistry, University of Leipzig, Medical Faculty, Leipzig, Germany
| | - Klaus Huse
- Leibniz Institute on Aging—Fritz Lipmann Institute (FLI), Jena, Germany
| | - Matthias Platzer
- Leibniz Institute on Aging—Fritz Lipmann Institute (FLI), Jena, Germany
| | - Daniela Volke
- Center for Biotechnology and Biomedicine, University of Leipzig, Leipzig, Germany
| | - Faramarz Dehghani
- Department of Anatomy and Cell Biology, Martin Luther University Halle-Wittenberg, Grosse Steinstrasse 52, Halle (Saale), Germany
| | - Anton Buzdin
- Pharmaceutical Artificial Intelligence Department, Insilico Medicine, Inc., Emerging Technology Centers, Johns Hopkins University at Eastern, B301, Baltimore, Maryland, United States of America
- Department of Pathway Engineering for Cancer Research, OmicsWay Corp., Walnut, CA, United States of America
- National Research Centre “Kurchatov Institute”, Centre for Convergence of Nano-, Bio-, Information and Cognitive Sciences and Technologies, 1, Akademika Kurchatova sq., Moscow, Russia
| | - Kathrin Engel
- Institute of Biochemistry, University of Leipzig, Medical Faculty, Leipzig, Germany
| | - Andrea Robitzki
- Centre for Biotechnology and Biomedicine, Molecular Biological-Biochemical Processing Technology, University of Leipzig, Germany
| | - Ralf Hoffmann
- Center for Biotechnology and Biomedicine, University of Leipzig, Leipzig, Germany
| | - Ines Gockel
- Department of Visceral, Transplantation, Thoracic and Vascular Surgery, University of Leipzig, Medical Faculty, Leipzig, Germany
| | - Gerd Birkenmeier
- Institute of Biochemistry, University of Leipzig, Medical Faculty, Leipzig, Germany
- * E-mail:
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22
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Stachs A, Engel K, Reimer T, Voigt J, Kundt G, Gerber B. Does computed tomography scan predict suboptimal primary cytoreduktion in patients with advanced ovarian cancer? Geburtshilfe Frauenheilkd 2017. [DOI: 10.1055/s-0037-1606155] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022] Open
Affiliation(s)
- A Stachs
- Universitätsfrauenklinik Rostock, Rostock
| | - K Engel
- Universitätsfrauenklinik Rostock, Rostock
| | - T Reimer
- Universitätsfrauenklinik Rostock, Rostock
| | - J Voigt
- Radiologische Praxis am Klinikum Südstadt Rostock, Rostock
| | - G Kundt
- Institut für Biostatistik und Informatik der Universität Rostock, Rostock
| | - B Gerber
- Universitätsfrauenklinik Rostock, Rostock
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Li VA, Dorrill R, Duvall MJ, Koblanski J, Negrashov S, Sakai M, Wipperfurth SA, Engel K, Jocher GR, Learned JG, Macchiarulo L, Matsuno S, McDonough WF, Mumm HP, Murillo J, Nishimura K, Rosen M, Usman SM, Varner GS. Invited Article: miniTimeCube. Rev Sci Instrum 2016; 87:021301. [PMID: 26931826 DOI: 10.1063/1.4942243] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/05/2023]
Abstract
We present the development of the miniTimeCube (mTC), a novel compact neutrino detector. The mTC is a multipurpose detector, aiming to detect not only neutrinos but also fast/thermal neutrons. Potential applications include the counterproliferation of nuclear materials and the investigation of antineutrino short-baseline effects. The mTC is a plastic 0.2% (10)B-doped scintillator (13 cm)(3) cube surrounded by 24 Micro-Channel Plate (MCP) photon detectors, each with an 8 × 8 anode totaling 1536 individual channels/pixels viewing the scintillator. It uses custom-made electronics modules which mount on top of the MCPs, making our detector compact and able to both distinguish different types of events and reject noise in real time. The detector is currently deployed and being tested at the National Institute of Standards and Technology Center for Neutron Research nuclear reactor (20 MWth) in Gaithersburg MD. A shield for further tests is being constructed, and calibration and upgrades are ongoing. The mTC's improved spatiotemporal resolution will allow for determination of incident particle directions beyond previous capabilities.
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Affiliation(s)
- V A Li
- Department of Physics and Astronomy, University of Hawaii at Manoa, Honolulu, Hawaii 96822, USA
| | - R Dorrill
- Department of Physics and Astronomy, University of Hawaii at Manoa, Honolulu, Hawaii 96822, USA
| | - M J Duvall
- Department of Physics and Astronomy, University of Hawaii at Manoa, Honolulu, Hawaii 96822, USA
| | - J Koblanski
- Department of Physics and Astronomy, University of Hawaii at Manoa, Honolulu, Hawaii 96822, USA
| | - S Negrashov
- Department of Physics and Astronomy, University of Hawaii at Manoa, Honolulu, Hawaii 96822, USA
| | - M Sakai
- Department of Physics and Astronomy, University of Hawaii at Manoa, Honolulu, Hawaii 96822, USA
| | - S A Wipperfurth
- Department of Geology, University of Maryland, College Park, Maryland 20742, USA
| | - K Engel
- Department of Geology, University of Maryland, College Park, Maryland 20742, USA
| | - G R Jocher
- Ultralytics LLC, Arlington, Virginia 22203, USA
| | - J G Learned
- Department of Physics and Astronomy, University of Hawaii at Manoa, Honolulu, Hawaii 96822, USA
| | - L Macchiarulo
- Department of Physics and Astronomy, University of Hawaii at Manoa, Honolulu, Hawaii 96822, USA
| | - S Matsuno
- Department of Physics and Astronomy, University of Hawaii at Manoa, Honolulu, Hawaii 96822, USA
| | - W F McDonough
- Department of Geology, University of Maryland, College Park, Maryland 20742, USA
| | - H P Mumm
- National Institute of Standards and Technology, 100 Bureau Dr., Gaithersburg, Maryland 20899, USA
| | - J Murillo
- Department of Physics and Astronomy, University of Hawaii at Manoa, Honolulu, Hawaii 96822, USA
| | - K Nishimura
- Ultralytics LLC, Arlington, Virginia 22203, USA
| | - M Rosen
- Department of Physics and Astronomy, University of Hawaii at Manoa, Honolulu, Hawaii 96822, USA
| | - S M Usman
- Exploratory Science and Technology Branch, National Geospatial-Intelligence Agency, Springfield, Virginia 22150, USA
| | - G S Varner
- Department of Physics and Astronomy, University of Hawaii at Manoa, Honolulu, Hawaii 96822, USA
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Kirn V, Thangarajah F, Richters L, Afheldt B, Bergauer F, Engel K, Schmidt-Petruschkat S, Theune M, Patzke J, Einzmann T, Mallmann P. Der „auffällige“ Pap-Abstrich: Belastung und Informationsbedürfnisse betroffener Frauen. Geburtshilfe Frauenheilkd 2014. [DOI: 10.1055/s-0034-1388311] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/24/2022] Open
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Yang PFF, Engel K, Sanno M, Dargel J, Wegmann K, Brüggemann GP, Rittweger J. Tibia segment deformation in response to simulated muscle forces: a cadaveric study with a novel optical segment tracking (OST) approach. J Musculoskelet Neuronal Interact 2014; 14:267-275. [PMID: 25198221] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 06/03/2023]
Abstract
OBJECTIVES A novel optical segment tracking (OST) approach reliant upon motion capturing was previously proposed to assess human tibia segment deformation. The purposes of the present study were to validate the OST approach and assess the contribution of muscular forces to the bone deformation in a well-defined ex vivo human model. METHODS A custom-made Lower Extremity Loading Device (LELD) was developed to simulate physiological muscle contractions in six human cadaveric lower extremities. Tibia segment deformation was measured by tracking the relative movement between two marker clusters which were affixed into the proximal and distal tibia, respectively. RESULTS Compared to the physiological norms, the simulated muscle forces remained at a low level. When quadriceps muscle was loaded with forces from 198 N to 505 N, posterior bending (0.12°-0.25°) and lateral bending (0.06°-0.21°) of the tibia segment were found. Large tibia bending angles were found when simulating the co-contraction of upper leg muscles and plantar flexors, and of all leg muscles, respectively. The standard deviations of the deformation angles between the repetitions remained at a low level. CONCLUSIONS We conclude that the OST approach has the potential to be applied in vivo and quantify muscle-induced bone deformations.
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Affiliation(s)
- P-F F Yang
- Key Laboratory for Space Bioscience and Biotechnology, School of Life Sciences, Northwestern Polytechnical University, Xi'an, China
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Engel K, Bassermann F. Das Ubiquitin-Proteasom-System und seine Bedeutung in der Onkologie. Dtsch Med Wochenschr 2013; 138:1178-82. [DOI: 10.1055/s-0033-1343110] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
Affiliation(s)
- K. Engel
- III. Medizinische Klinik, Klinikum rechts der Isar, Technische Universität München
| | - F. Bassermann
- III. Medizinische Klinik, Klinikum rechts der Isar, Technische Universität München
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Gauer T, Kiesel A, Engel K, Gargioni E, Petersen C. EP-1508 VALIDATION OF A LEAF SEQUENCING MODEL FOR ELECTRON IMRT PROVIDING EFFICIENT AND ROBUST DOSE DELIVERY IN BREAST CANCER. Radiother Oncol 2012. [DOI: 10.1016/s0167-8140(12)71841-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
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Neufeld JD, Engel K, Cheng J, Moreno-Hagelsieb G, Rose DR, Charles TC. Open resource metagenomics: a model for sharing metagenomic libraries. Stand Genomic Sci 2011; 5:203-10. [PMID: 22180823 PMCID: PMC3235511 DOI: 10.4056/sigs.1974654] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022] Open
Abstract
Both sequence-based and activity-based exploitation of environmental DNA have provided unprecedented access to the genomic content of cultivated and uncultivated microorganisms. Although researchers deposit microbial strains in culture collections and DNA sequences in databases, activity-based metagenomic studies typically only publish sequences from the hits retrieved from specific screens. Physical metagenomic libraries, conceptually similar to entire sequence datasets, are usually not straightforward to obtain by interested parties subsequent to publication. In order to facilitate unrestricted distribution of metagenomic libraries, we propose the adoption of open resource metagenomics, in line with the trend towards open access publishing, and similar to culture- and mutant-strain collections that have been the backbone of traditional microbiology and microbial genetics. The concept of open resource metagenomics includes preparation of physical DNA libraries, preferably in versatile vectors that facilitate screening in a diversity of host organisms, and pooling of clones so that single aliquots containing complete libraries can be easily distributed upon request. Database deposition of associated metadata and sequence data for each library provides researchers with information to select the most appropriate libraries for further research projects. As a starting point, we have established the Canadian MetaMicroBiome Library (CM(2)BL [1]). The CM(2)BL is a publicly accessible collection of cosmid libraries containing environmental DNA from soils collected from across Canada, spanning multiple biomes. The libraries were constructed such that the cloned DNA can be easily transferred to Gateway® compliant vectors, facilitating functional screening in virtually any surrogate microbial host for which there are available plasmid vectors. The libraries, which we are placing in the public domain, will be distributed upon request without restriction to members of both the academic research community and industry. This article invites the scientific community to adopt this philosophy of open resource metagenomics to extend the utility of functional metagenomics beyond initial publication, circumventing the need to start from scratch with each new research project.
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Zumpe C, Engel K, Wiedemann N, Metzger A, Pischetsrieder M, Bachmann C. Development of a STAT5 Phosphorylation Assay as a Rapid Bioassay to Assess Interleukin-7 Potency. Curr Pharm Biotechnol 2011; 12:1580-8. [DOI: 10.2174/138920111798357294] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/22/2010] [Accepted: 01/12/2011] [Indexed: 11/22/2022]
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Gargioni E, Cremers F, Gauer T, Engel K, Goy Y, Petersen C. 317 oral DOSIMETRIC COMPARISON OF IMRT USING HELICAL PHOTON BEAMS VERSUS RANGE-MODULATED ELECTRON BEAMS IN RADIOTHERAPY OF BREAST AND CHEST WALL CANCER. Radiother Oncol 2011. [DOI: 10.1016/s0167-8140(11)70439-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
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Mercimek-Mahmutoglu S, Moeslinger D, Häberle J, Engel K, Herle M, Strobl MW, Scheibenreiter S, Muehl A, Stöckler-Ipsiroglu S. Long-term outcome of patients with argininosuccinate lyase deficiency diagnosed by newborn screening in Austria. Mol Genet Metab 2010; 100:24-8. [PMID: 20236848 DOI: 10.1016/j.ymgme.2010.01.013] [Citation(s) in RCA: 43] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 01/23/2010] [Accepted: 01/24/2010] [Indexed: 11/16/2022]
Abstract
Twenty-three patients with late onset argininosuccinate lyase deficiency (ASLD) were identified during a 27-year period of newborn screening in Austria (1:95,600, 95% CI=1:68,036-1:162,531). One additional patient was identified outside the newborn screening with neonatal hyperammonemia. Long-term outcome data were available in 17 patients (median age 13 years) ascertained by newborn screening. Patients were treated with protein restricted diet and oral arginine supplementation during infancy and childhood. IQ was average/above average in 11 (65%), low average in 5 (29%), and in the mild intellectual disability range in 1 (6%) patients. Four patients had an abnormal EEG without evidence of clinical seizures and three had abnormal liver function tests and/or evidence of hepatic steatosis. Plasma citrulline levels were elevated in four patients. Plasma ammonia levels were within normal range prior and after a protein load in all patients. Seven different mutations were identified in the 16 alleles investigated. Four mutations were novel (p.E189G, p.R168C, p.R126P, and p.D423H). All mutations were associated with low argininosuccinate lyase activities (0-15%) in red blood cells. Newborn screening might be beneficial in the prevention of chronic neurologic and intellectual sequelae in late onset ASLD, but a proportion of benign variants might have contributed to the overall favorable outcome as well.
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Affiliation(s)
- S Mercimek-Mahmutoglu
- Department of Pediatrics, Division of Biochemical Diseases, British Columbia University, Vancouver, BC, Canada
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Gnoth MJ, Sandmann S, Engel K, Radtke M. In vitro to in vivo comparison of the substrate characteristics of sorafenib tosylate toward P-glycoprotein. Drug Metab Dispos 2010; 38:1341-6. [PMID: 20413726 DOI: 10.1124/dmd.110.032052] [Citation(s) in RCA: 33] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/02/2023] Open
Abstract
Sorafenib (Nexavar) is a novel oral Raf kinase and vascular endothelial growth factor receptor inhibitor. Most anticancer drugs are substrates for ATP-binding cassette efflux pumps especially for P-glycoprotein (P-gp). To evaluate the influence of P-gp on the pharmacokinetics of sorafenib substrate properties for this transporter were investigated. Therefore, permeability of sorafenib across Caco-2 and P-gp-overexpressing cells was determined. To determine the in vivo relevance of these in vitro findings, pharmacokinetics of sorafenib in mdr1a/1b(-/-) and wild-type (WT) mice was studied. Sorafenib is highly permeable and exhibits a slight efflux across Caco-2 cells. In P-gp-overexpressing cells, a small concentration-dependent efflux was observed, which was completely blocked by the addition of ivermectin. In mdr1a/1b(-/-) and WT mice, unchanged compound represented by far the majority of radioactivity in plasma. After intravenous and oral administration, brain/plasma concentration ratios in mdr1a/1b(-/-) mice were 1.3- to 1.5-fold higher than those in WT mice. However, after intravenous or oral administration, plasma concentrations were similar in both mouse strains. In conclusion, sorafenib is highly permeable and a weak P-gp substrate in vitro. These findings were confirmed by the small factor of 1.3 to 1.5 observed for the brain/plasma ratios in mdr1a/1b(-/-) versus WT mice in vivo. Based on these in vitro and in vivo results, it is unlikely that P-gp has a major effect on the plasma concentrations of sorafenib in humans. Because of the high permeability and low P-gp-mediated transport, sorafenib might be able to cross the blood-brain barrier and target tumors within the brain.
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Affiliation(s)
- M J Gnoth
- Drug Metabolism and Pharmacokinetics, Bayer Schering Pharma AG, Wuppertal, Germany.
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Klaus V, Vermeulen T, Minassian B, Israelian N, Engel K, Lund AM, Roebrock K, Christensen E, Häberle J. Highly variable clinical phenotype of carbamylphosphate synthetase 1 deficiency in one family: an effect of allelic variation in gene expression? Clin Genet 2010; 76:263-9. [PMID: 19793055 DOI: 10.1111/j.1399-0004.2009.01216.x] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
Abstract
Deficiency of the urea cycle enzyme carbamylphosphate synthetase 1 (CPS1) causes hyperammonemia with a vast range of clinical severity from neonatal onset with early lethality to onset after age 40 with rare episodes of hyperammonemic confusion. The cause for this variability is not understood. We report two patients from one family with highly divergent clinical course, one presenting neonatally with a fatal form and the other at age 45 with benign diet-responsive disease. The patients are compound heterozygous for two mutations of the CPS1 gene, c.3558 + 1G > C and c.4101 + 2T > C. The haplotypes containing each mutation are identical between the two patients, as are the sequences of CPS1 exons and flanking introns. Transcriptional experiments show that the abnormal CPS1 transcripts generated by both mutations are identical in these two patients. We characterize promoter and enhancer sequences of the CPS1 gene and find also in these regions no sequence differences between patients. Finally, we perform cloning experiments and find that in the neonatal-onset case, clones of messenger RNA (mRNA) expressed from the allele carrying the c.4101 + 2T > C mutation are threefold more than clones of mRNA from the allele with the c.3558 + 1G > C mutation, whereas in the adult-onset case the two types of clones are equal, indicating skewed expression towards the c.4101 + 2T > C allele in the neonatal case. Although we are yet to understand the mechanism of this differential expression, our work suggests that allelic imbalance may explain clinical variability in CPS1 deficiency in some families.
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Affiliation(s)
- V Klaus
- Universitätsklinikum Münster, Klinik und Poliklinik für Kinder- und Jugendmedizin, 48129 Münster, Germany
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Niemier K, Schmidt S, Engel K, Steinmetz A, Herms K, Herms K, Liefring V, Maulhardt A, Wetterling T, Kosup S, Casser R, Jäger G, Törkott S, Bieneck K, Rotter G, Marnitz U, Klein A, Jahr S, Reishauer A, Seidel W. Funktionelle Diagnostik der Bewegungssteuerung, Bewegungsstabilisation und Hypermobilität. Orthopäde 2009; 38:847-54. [DOI: 10.1007/s00132-009-1474-y] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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Engel K, Kildeberg PA, Fine BP, Winters RW. Effects of Acute Respiratory Acidosis on Blood Lactate Concentration. Scandinavian Journal of Clinical and Laboratory Investigation 2009. [DOI: 10.3109/00365516709076940] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/13/2022]
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Bandelow B, Engel K, Wedekind D. [Evidence-based medicine in therapy of anxiety disorders]. MMW Fortschr Med 2009; 151:89-91. [PMID: 19504830] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/27/2023]
Affiliation(s)
- B Bandelow
- Klinik für Psychiatrie und Psychotherapie der Universität Göttingen.
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Wedekind D, Sprute A, Broocks A, Hüther G, Engel K, Falkai P, Bandelow B. Nocturnal urinary cortisol excretion over a randomized controlled trial with paroxetine vs. placebo combined with relaxation training or aerobic exercise in panic disorder. Curr Pharm Des 2009; 14:3518-24. [PMID: 19075728 DOI: 10.2174/138161208786848757] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Abstract
INTRODUCTION Data on basal hypothalamo-pituitary-adrenomedullary (HPA) function over controlled treatment trials with serotonergic drugs in anxiety disorders are still rare. METHODS 29 patients with panic disorder participating in a 10 week randomized, controlled trial (paroxetine vs. placebo with exercise or relaxation; N=60) collected urine for cortisol excretion over 3 consecutive nights before start and before termination of the treatment episode. Urinary cortisol was measured by radioimmunoassay. Efficacy measures were the Clinical Global Impression Scale (CGI) and the Panic and Agoraphobia Scale (P&A). 83% were female (p<.05 vs. males). 55% received additional aerobic exercise, and 45% relaxation. 55% received paroxetine treatment, and 45% placebo. Significantly fewer males received placebo treatment (p<.05). RESULTS All subjects improved significantly. Cortisol excretion did not differ between treatment groups or at pre-/post measurements. Females showed a significantly higher variability of cortisol excretion compared to males, at pre-(p<.005) and post (p=.015) assessments. Males displayed a trend to lower basal HPA function at end of treatment (p=.08). HPA variability after treatment showed a trend to be higher in the paroxetine (p=.052) -who clinically improved significantly better- compared to the placebo group. No relationship between HPA activity and treatment response or with exercise was detected. DISCUSSION HPA function shows significant gender differences, with females having a higher HPA function variability. Future studies on HPA function in treatment trials should address gender and medication effects.
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Affiliation(s)
- D Wedekind
- Department of Psychiatry and Psychotherapy, University of Goettingen, Von-Siebold-Strasse 5, D-37075 Goettingen, Germany.
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Oexle K, Engel K, Tinschert S, Haas D, Lee-Kirsch MA. Three-generational alkaptonuria in a non-consanguineous family. J Inherit Metab Dis 2008; 31 Suppl 2:S425-30. [PMID: 19096913 DOI: 10.1007/s10545-008-0994-7] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 07/07/2008] [Revised: 11/10/2008] [Accepted: 11/11/2008] [Indexed: 11/28/2022]
Abstract
OBJECTIVE Alkaptonuria (AKU) is a rare inborn error of metabolism of aromatic amino acids and considered to be an autosomal recessive trait caused by mutations in the homogentisate 1,2-dioxygenase (HGD) gene. A dominant pattern of inheritance has been reported but was attributed to extended consanguinity in many cases. However, we have observed a non-consanguineous family segregating AKU in a dominant manner over three generations. RESULTS All affected individuals presented with typical features of AKU including darkening of the urine, ochronosis, arthropathy, and elevated urinary excretion of homogentisic acid. Sequence analysis of the HGD gene from genomic DNA of two affected individuals, uncle and niece, revealed a heterozygous missense mutation (M368V) in the uncle that was not present in his niece. Microsatellite genotyping demonstrated that both were heterozygous at the HGD locus and shared one haplotype. This haplotype did not contain a detectable HGD mutation. The haplotype was also found in a healthy son of the niece, making a dominant HGD mutation unlikely. Moreover, sequencing of cDNA from lymphoblastoid cells of the niece did not reveal an HGD mRNA with a potentially dominant-negative effect. CONCLUSION Rare causes of the uncommon AKU inheritance in this family have to be considered, ranging from the coincidence of undetectable HGD mutations to a dominant mutation of a second, hitherto unknown AKU gene.
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Affiliation(s)
- K Oexle
- Institute of Human Genetics, Technical University Munich, Trogerstr. 32, D-81675, München, Germany.
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Wedekind D, Engel K, Bandelow B. [Social anxiety disorder--diagnostics and treatment options]. Fortschr Neurol Psychiatr 2008; 76:616-624. [PMID: 18833508 DOI: 10.1055/s-2008-1038201] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/26/2023]
Affiliation(s)
- D Wedekind
- Klinik für Psychiatrie und Psychotherapie der Georg-August-Universität Göttingen.
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Engel K, Reuter J, Seiler C, Mönting JS, Jakob T, Schempp CM. Anti-inflammatory effect of pimecrolimus in the sodium lauryl sulphate test. J Eur Acad Dermatol Venereol 2008; 22:447-50. [DOI: 10.1111/j.1468-3083.2007.02477.x] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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Engel K, Klaus V, Keyvani K, Hörnig-Franz I, Rellensmann G, Häberle J. Neugeborenes mit Knochenbrüchen: Nemaline Myopathie ist eine Differentialdiagnose zur Osteogenesis imperfecta. Z Geburtshilfe Neonatol 2008. [DOI: 10.1055/s-2008-1079045] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
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Abstract
Anxiety disorders represent a widespread illness. Those affected with initial symptoms usually seek the help of their family doctor. In many cases, considerable time passes before the diagnosis has been established and specialised treatment applied, with the result that chronification is furthered. Physical symptoms of an anxiety disorder, and fears of contracting somatic disease are almost always the first to be described. In patients abusing alcohol and/or hypnotics consideration must always be given to an anxiety disorder. Previously existing symptoms almost always include depressive moods or avoidance behavior. Stressful life events and other psychosocial stressful factors may also point the way to the early diagnosis of an anxiety disorder.
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Affiliation(s)
- D Wedekind
- Klinik für Psychiatrie und Psychotherapie, Georg-August-Universität Göttingen.
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Jacobi U, Engel K, Patzelt A, Worm M, Sterry W, Lademann J. Penetration of Pollen Proteins into the Skin. Skin Pharmacol Physiol 2007; 20:297-304. [PMID: 17851273 DOI: 10.1159/000108101] [Citation(s) in RCA: 26] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/01/2007] [Accepted: 06/15/2007] [Indexed: 11/19/2022]
Abstract
Atopic dermatitis is a chronic remittent skin disease. In the extrinsic form of atopic dermatitis, type IgE-mediated reactions play an important pathophysiological role. The aim of the present study was to examine whether type I allergens can penetrate into the skin. Therefore, pollen proteins were labeled with fluorescein isothiocyanate (FITC), and their penetration profile was studied qualitatively. Solutions of FITC-labeled pollen proteins were applied in vitro on porcine skin and in vivo on human skin. In vitro, the FITC-labeled proteins were observed within the complete stratum corneum (SC) and inside the hair follicles even 15 min after application. They were also distributed inside the dermis around the hair follicles. In vivo, a similar pattern of distribution within the SC and the hair follicles was observed. These results indicate penetration via the SC lipid layers and a faster penetration via the hair follicles. The FITC-labeled proteins entered the dermis via the follicular pathway. Therefore, the follicular penetration should be considered in the development of skin protection strategies. To evaluate such strategies, the developed method can be used, and further studies in atopic dermatitis patients are necessary to determine whether the penetration of type I allergens is increased.
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Affiliation(s)
- U Jacobi
- Department of Dermatology and Allergology, Charité - Universitätsmedizin Berlin, Berlin, Germany
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Schöneberg T, Hermsdorf T, Engemaier E, Engel K, Liebscher I, Thor D, Zierau K, Römpler H, Schulz A. Structural and functional evolution of the P2Y(12)-like receptor group. Purinergic Signal 2007; 3:255-68. [PMID: 18404440 PMCID: PMC2072910 DOI: 10.1007/s11302-007-9064-0] [Citation(s) in RCA: 35] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/06/2007] [Accepted: 07/19/2007] [Indexed: 12/11/2022] Open
Abstract
Metabotropic pyrimidine and purine nucleotide receptors (P2Y receptors) belong to the superfamily of G protein-coupled receptors (GPCR). They are distinguishable from adenosine receptors (P1) as they bind adenine and/or uracil nucleotide triphosphates or diphosphates depending on the subtype. Over the past decade, P2Y receptors have been cloned from a variety of tissues and species, and as many as eight functional subtypes have been characterized. Most recently, several members of the P2Y12-like receptor group, which includes the clopidogrel-sensitive ADP receptor P2Y12, have been deorphanized. The P2Y12-like receptor group comprises several structurally related GPCR which, however, display heterogeneous agonist specificity including nucleotides, their derivatives, and lipids. Besides the established function of P2Y12 in platelet activation, expression in macrophages, neuronal and glial cells as well as recent results from functional studies implicate that several members of this group may have specific functions in neurotransmission, inflammation, chemotaxis, and response to tissue injury. This review focuses specifically on the structure-function relation and shortly summarizes some aspects of the physiological relevance of P2Y12-like receptor members.
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Affiliation(s)
- Torsten Schöneberg
- Institute of Biochemistry, Molecular Biochemistry, Medical Faculty, University of Leipzig, Johannisallee 30, 04103, Leipzig, Germany,
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Engel K, Schmidt U, Reuter J, Weckesser S, Simon-Haarhaus B, Schempp CM. Usnea barbata extract prevents ultraviolet-B induced prostaglandin E2 synthesis and COX-2 expression in HaCaT keratinocytes. J Photochem Photobiol B 2007; 89:9-14. [PMID: 17766140 DOI: 10.1016/j.jphotobiol.2007.08.002] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/09/2007] [Revised: 08/01/2007] [Accepted: 08/01/2007] [Indexed: 10/23/2022]
Abstract
Usnea barbata and its major constituent usnic acid are potent antimicrobial agents. Here, we have investigated anti-inflammatory properties of an U. barbata extract (UBE) containing 4% usnic acid in an ultraviolet-B (UVB) model with HaCaT keratinocytes. UVB irradiation induced PGE(2) production and COX-2 expression in a time and dose-dependent manner. UBE inhibited PGE(2) production at a half-maximal concentration of 60 microg/ml (2.4 microg/ml usnic acid) that did not affect the UVB-induced upregulation of COX-2, suggesting an effect on enzyme activity rather than on protein expression. The inhibition of PGE(2) production by UBE was not due to cytotoxicity. Besides its known antimicrobial properties, UBE displays specific UVB protective effects that might be useful in the topical treatment of UVB-mediated inflammatory skin conditions.
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Affiliation(s)
- K Engel
- Department of Dermatology, University Medical Center Freiburg, Hauptstr. 7, D-79104 Freiburg, Germany
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Huyke C, Engel K, Simon-Haarhaus B, Quirin KW, Schempp CM. Composition and biological activity of different extracts from Schisandra sphenanthera and Schisandra chinensis. Planta Med 2007; 73:1116-26. [PMID: 17611932 DOI: 10.1055/s-2007-981559] [Citation(s) in RCA: 40] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/16/2023]
Abstract
Plants of the Schisandraceae family contain a variety of pharmacologically active lignans like schizandrin, deoxyschizandrin, deangeloylgomisin B, gomisin A, gomisin O, gamma-schizandrin and isogomisin O. Here we have compared the composition of different polar and non-polar extracts of Schisandra sphenanthera and Schisandra chinensis. We also have screened the extracts for antiproliferative and anti-inflammatory effects in different cell-based and cell-free assays. Extracts produced with the non-polar solvents CO(2), hexane and CO(2)/5% ethanol had a similar composition. In contrast, polar extraction with ethanol provided a considerably higher yield, but a lower content of volatiles and lignans in comparison to the non-polar extracts. The proliferation of the epidermal cell lines HaCaT and A431 was dose-dependently inhibited by both the Schisandra sphenanthera and Schisandra chinensis extracts, the non-polar extracts being superior to the polar ones. The non-polar Schisandra sphenanthera extract was the most active with a half-maximal inhibitory concentration of 20 microg/mL. In a cell-free enzyme inhibition assay with recombinant cyclooxygenase-2 (COX-2) the non-polar Schisandra sphenanthera extract dose-dependently inhibited COX-2 catalysed prostaglandin (PG) production (IC(50) = 0.2 microg/mL). It also reduced the ultraviolet-B (UVB)-induced PGE (2) production (IC(50) = 4 microg/mL) and COX-2 expression in HaCaT keratinocytes. We conclude that non-polar SChisandra extracts obtained by CO(2) extraction might be useful in the prevention and treatment of hyperproliferative and inflammatory skin diseases.
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MESH Headings
- Anti-Inflammatory Agents, Non-Steroidal/administration & dosage
- Anti-Inflammatory Agents, Non-Steroidal/chemistry
- Anti-Inflammatory Agents, Non-Steroidal/pharmacology
- Anti-Inflammatory Agents, Non-Steroidal/therapeutic use
- Antineoplastic Agents, Phytogenic/administration & dosage
- Antineoplastic Agents, Phytogenic/chemistry
- Antineoplastic Agents, Phytogenic/pharmacology
- Antineoplastic Agents, Phytogenic/therapeutic use
- Cell Line, Tumor/drug effects
- Cell Proliferation/drug effects
- Cyclooxygenase 2/biosynthesis
- Dinoprostone/biosynthesis
- Dose-Response Relationship, Drug
- Fruit
- Humans
- Keratinocytes/drug effects
- Keratinocytes/enzymology
- Phytotherapy
- Plant Extracts/administration & dosage
- Plant Extracts/chemistry
- Plant Extracts/pharmacology
- Plant Extracts/therapeutic use
- Schisandra
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Affiliation(s)
- Constance Huyke
- Department of Dermatology, University Medical Center, Freiburg, Germany
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Weckesser S, Engel K, Simon-Haarhaus B, Wittmer A, Pelz K, Schempp CM. Screening of plant extracts for antimicrobial activity against bacteria and yeasts with dermatological relevance. Phytomedicine 2007; 14:508-16. [PMID: 17291738 DOI: 10.1016/j.phymed.2006.12.013] [Citation(s) in RCA: 119] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/06/2006] [Accepted: 10/13/2006] [Indexed: 05/09/2023]
Abstract
There is cumulative resistance against antibiotics of many bacteria. Therefore, the development of new antiseptics and antimicrobial agents for the treatment of skin infections is of increasing interest. We have screened six plant extracts and isolated compounds for antimicrobial effects on bacteria and yeasts with dermatological relevance. The following plant extracts have been tested: Gentiana lutea, Harpagophytum procumbens, Boswellia serrata (dry extracts), Usnea barbata, Rosmarinus officinalis and Salvia officinalis (supercritical carbon dioxide [CO2] extracts). Additionally, the following characteristic plant substances were tested: usnic acid, carnosol, carnosic acid, ursolic acid, oleanolic acid, harpagoside, boswellic acid and gentiopicroside. The extracts and compounds were tested against 29 aerobic and anaerobic bacteria and yeasts in the agar dilution test. U. barbata-extract and usnic acid were the most active compounds, especially in anaerobic bacteria. Usnea CO2-extract effectively inhibited the growth of several Gram-positive bacteria like Staphylococcus aureus (including methicillin-resistant strains - MRSA), Propionibacterium acnes and Corynebacterium species. Growth of the dimorphic yeast Malassezia furfur was also inhibited by Usnea-extract. Besides the Usnea-extract, Rosmarinus-, Salvia-, Boswellia- and Harpagophytum-extracts proved to be effective against a panel of bacteria. It is concluded that due to their antimicrobial effects some of the plant extracts may be used for the topical treatment of skin disorders like acne vulgaris and seborrhoic eczema.
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Affiliation(s)
- S Weckesser
- Department of Dermatology, University of Freiburg, Hauptstrasse 7, 79104 Freiburg, Germany
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