Arbuscular mycorrhizal trees influence the latitudinal beta-diversity gradient of tree communities in forests worldwide

Arbuscular mycorrhizal (AM) and ectomycorrhizal (EcM) associations are critical for host-tree performance. However, how mycorrhizal associations correlate with the latitudinal tree beta-diversity remains untested. Using a global dataset of 45 forest plots representing 2,804,270 trees across 3840 species, we test how AM and EcM trees contribute to total beta-diversity and its components (turnover and nestedness) of all trees. We find AM rather than EcM trees predominantly contribute to decreasing total beta-diversity and turnover and increasing nestedness with increasing latitude, probably because wide distributions of EcM trees do not generate strong compositional differences among localities. Environmental variables, especially temperature and precipitation, are strongly correlated with beta-diversity patterns for both AM trees and all trees rather than EcM trees. Results support our hypotheses that latitudinal beta-diversity patterns and environmental effects on these patterns are highly dependent on mycorrhizal types. Our findings highlight the importance of AM-dominated forests for conserving global forest biodiversity.

Tree mode of death and mortality risk factors across Amazon forests

The carbon sink capacity of tropical forests is substantially affected by tree mortality. However, the main drivers of tropical tree death remain largely unknown. Here we present a pan-Amazonian assessment of how and why trees die, analysing over 120,000 trees representing > 3800 species from 189 long-term RAINFOR forest plots. While tree mortality rates vary greatly Amazon-wide, on average trees are as likely to die standing as they are broken or uprooted-modes of death with different ecological consequences. Species-level growth rate is the single most important predictor of tree death in Amazonia, with faster-growing species being at higher risk. Within species, however, the slowest-growing trees are at greatest risk while the effect of tree size varies across the basin. In the driest Amazonian region species-level bioclimatic distributional patterns also predict the risk of death, suggesting that these forests are experiencing climatic conditions beyond their adaptative limits. These results provide not only a holistic pan-Amazonian picture of tree death but large-scale evidence for the overarching importance of the growth-survival trade-off in driving tropical tree mortality.

Sky-canopy border length, exposure and thresholding influence accuracy of hemispherical photography for complex plant canopies

BACKGROUND

Hemispherical photography (HP) is a popular method to estimate canopy structure and understorey light environment, which analyses photographs acquired with wide view-angle lens (i.e. fisheye lens). To increase HP accuracy, the approaches of most previous studies were to increase the preciseness of exposure and thresholding of photographs, while ours quantified effects of canopy properties (gap fraction and length of sky-canopy border (SCB)) and errors of exposure and thresholding on the accuracy of HP.

RESULTS

Through analysing photographs of real and model canopies, it was showed that HP inaccuracy resulted from the mismatch between exposure and thresholding rather than exposure or thresholding errors alone. HP inaccuracy was a function of the SCB length and the extent of exposure and thresholding errors, but independent of gap fraction.

DISCUSSION

In photographs, SCBs are recorded as grey pixels which greyness is in between that of sky and canopy pixels. When there are exposure and thresholding errors, grey pixels are those prone to be misclassified in image analysis. Longer (vegetation with taller canopies) and wider (lower image sharpness) SCBs in photographs can both result in a higher amount of grey pixels and ultimately higher HP inaccuracy for a given extent of exposure and threshold errors.

CONCLUSIONS

Using lenses with view angle narrower rather than that of fisheye lens can shorten the SCB length in photographs and in turn reduce HP estimation inaccuracy for canopy structure and understorey light environment. Since short SCBs and low levels of exposure and thresholding errors can both result in low HP inaccuracy, to identify the true performance of new exposure and thresholding methods for HP, photographs recording canopies with long SCBs and acquired with fisheye lenses should be used. Because HP inaccuracy in a function of the amount of grey pixels resulting from SCBs, the amount of these pixels in photographs can be used as a universal parameter to quantify canopy properties influential to HP estimation and in turn make cross-study comparisons feasible.

Characteristics of tropical human-modified forests after 20 years of natural regeneration

BACKGROUND

Abandoned human-modified forests are refuges for remnant biodiversity. However, there are very few studies on the biodiversity and regeneration of native species in human-modified forests which are rich in exotic trees. Our research aim is to evaluate the regeneration status and biodiversity of two adjacent human-modified forests. The two forests have distinct overstorey exotic species richness prior to abandonment: one is an exotic tree plantation low in species richness, and the other is an exotic arboretum high in species richness. The original management practices of the two forests have been neglected for more than 20 years. A primary forest was selected as a reference forest to compare their diversity and regeneration status. We asked: (1) Is there a structural difference among the three forests? (2) What are the proportions of native saplings in the human-modified forests? (3) Are the introduced exotic species able to naturalize?

RESULTS

We recorded 1316 individuals from 88 species, belonging to 69 genera and 34 families in the three forests [each sampled 16 quadrats (10 m × 5 m)]. Both human-modified forests were similar in their height structure, diameter structure, and sapling density, but differed in species diversity (characterized by rarefaction curves) and floristic composition (indicated by a quantitative similarity index). In the arboretum, only 50% of the sapling individuals were native. Surprisingly, when sampling efforts were standardized, the arboretum had higher native sapling species richness than the exotic species-poor plantation. Moreover, both human-modified forests had conserved a few rare and endemic species. Nevertheless, some exotic species in the arboretum had escaped to the nearby plantation.

CONCLUSIONS

After 20 years of abandonment, the two human-modified forests had converged in structure, but not in diversity patterns of native saplings. This could be due to that the diversity of exotic overstorey composition can influence the natural regeneration of understorey plants. Our study also raised concerns about conserving native species and managing naturalized exotic species in these human-modified forests.

Long-term decline of the Amazon carbon sink

Atmospheric carbon dioxide records indicate that the land surface has acted as a strong global carbon sink over recent decades, with a substantial fraction of this sink probably located in the tropics, particularly in the Amazon. Nevertheless, it is unclear how the terrestrial carbon sink will evolve as climate and atmospheric composition continue to change. Here we analyse the historical evolution of the biomass dynamics of the Amazon rainforest over three decades using a distributed network of 321 plots. While this analysis confirms that Amazon forests have acted as a long-term net biomass sink, we find a long-term decreasing trend of carbon accumulation. Rates of net increase in above-ground biomass declined by one-third during the past decade compared to the 1990s. This is a consequence of growth rate increases levelling off recently, while biomass mortality persistently increased throughout, leading to a shortening of carbon residence times. Potential drivers for the mortality increase include greater climate variability, and feedbacks of faster growth on mortality, resulting in shortened tree longevity. The observed decline of the Amazon sink diverges markedly from the recent increase in terrestrial carbon uptake at the global scale, and is contrary to expectations based on models.

Drought-mortality relationships for tropical forests

*The rich ecology of tropical forests is intimately tied to their moisture status. Multi-site syntheses can provide a macro-scale view of these linkages and their susceptibility to changing climates. Here, we report pan-tropical and regional-scale analyses of tree vulnerability to drought. *We assembled available data on tropical forest tree stem mortality before, during, and after recent drought events, from 119 monitoring plots in 10 countries concentrated in Amazonia and Borneo. *In most sites, larger trees are disproportionately at risk. At least within Amazonia, low wood density trees are also at greater risk of drought-associated mortality, independent of size. For comparable drought intensities, trees in Borneo are more vulnerable than trees in the Amazon. There is some evidence for lagged impacts of drought, with mortality rates remaining elevated 2 yr after the meteorological event is over. *These findings indicate that repeated droughts would shift the functional composition of tropical forests toward smaller, denser-wooded trees. At very high drought intensities, the linear relationship between tree mortality and moisture stress apparently breaks down, suggesting the existence of moisture stress thresholds beyond which some tropical forests would suffer catastrophic tree mortality.

Drought sensitivity of the Amazon rainforest

Amazon forests are a key but poorly understood component of the global carbon cycle. If, as anticipated, they dry this century, they might accelerate climate change through carbon losses and changed surface energy balances. We used records from multiple long-term monitoring plots across Amazonia to assess forest responses to the intense 2005 drought, a possible analog of future events. Affected forest lost biomass, reversing a large long-term carbon sink, with the greatest impacts observed where the dry season was unusually intense. Relative to pre-2005 conditions, forest subjected to a 100-millimeter increase in water deficit lost 5.3 megagrams of aboveground biomass of carbon per hectare. The drought had a total biomass carbon impact of 1.2 to 1.6 petagrams (1.2 x 10(15) to 1.6 x 10(15) grams). Amazon forests therefore appear vulnerable to increasing moisture stress, with the potential for large carbon losses to exert feedback on climate change.

The changing Amazon forest

Long-term monitoring of distributed, multiple plots is the key to quantify macroecological patterns and changes. Here we examine the evidence for concerted changes in the structure, dynamics and composition of old-growth Amazonian forests in the late twentieth century. In the 1980s and 1990s, mature forests gained biomass and underwent accelerated growth and dynamics, all consistent with a widespread, long-acting stimulation of growth. Because growth on average exceeded mortality, intact Amazonian forests have been a carbon sink. In the late twentieth century, biomass of trees of more than 10cm diameter increased by 0.62+/-0.23tCha-1yr-1 averaged across the basin. This implies a carbon sink in Neotropical old-growth forest of at least 0.49+/-0.18PgCyr-1. If other biomass and necromass components are also increased proportionally, then the old-growth forest sink here has been 0.79+/-0.29PgCyr-1, even before allowing for any gains in soil carbon stocks. This is approximately equal to the carbon emissions to the atmosphere by Amazon deforestation. There is also evidence for recent changes in Amazon biodiversity. In the future, the growth response of remaining old-growth mature Amazon forests will saturate, and these ecosystems may switch from sink to source driven by higher respiration (temperature), higher mortality (as outputs equilibrate to the growth inputs and periodic drought) or compositional change (disturbances). Any switch from carbon sink to source would have profound implications for global climate, biodiversity and human welfare, while the documented acceleration of tree growth and mortality may already be affecting the interactions among millions of species.

Formation of Atomically Flat Silver Films on GaAs with a "Silver Mean" Quasi Periodicity

A flat epitaxial silver film on a gallium arsenide [GaAs(110)] surface was synthesized in a two-step process. Deposition of a critical thickness of silver at low temperature led to the formation of a dense nanocluster film. Upon annealing, all atoms rearranged themselves into an atomically flat film. This silver film has a close-packed (111) structure modulated by a "silver mean" quasi-periodic sequence. The ability to grow such epitaxial overlayers of metals on semiconductors enables the testing of theoretical models and provides a connection between metal and semiconductor technologies.