1
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Tandon D, Curlewis K, Vusirikala A, Subramanian P, Patel A. The impact of electronic pathways and digital systems on neck of femur fracture outcomes globally: a systematic review. Ann R Coll Surg Engl 2023; 105:685-691. [PMID: 36927067 PMCID: PMC10618033 DOI: 10.1308/rcsann.2022.0152] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/18/2023] Open
Abstract
INTRODUCTION Electronic pathways (e-pathways) and digital systems are novel interventions with several uses in healthcare, ranging from clinical decision support systems to checklists for care delivery. Their application in the management of neck of femur (NOF) fractures is evolving and they may play a key role in facilitating improvements in care delivery. The primary aim of this review was to outline the impact of e-pathways/digital systems on NOF fracture outcomes. METHODS A systematic literature search was performed using the PRISMA (Preferred Reporting Items for Systematic reviews and Meta-Analyses) guidelines. A total of 698 citations were evaluated, of which 38 passed the inclusion/exclusion criteria. Six studies were then finalised following full-text review. Heterogenous data meant a narrative synthesis was undertaken. Risk of bias for each paper was assessed using the Downs and Black scale. RESULTS A statistically significant improvement was demonstrated for time to theatre (3/6 studies), length of hospital stay (2/6 studies) and secondary fracture prevention (2/6 studies). Although postoperative delirium and mortality improved with the introduction of e-pathways/digital systems, statistical significance was not achieved. No outcome measures were adversely affected. CONCLUSIONS This systematic review of the literature demonstrates that e-pathways and digital systems are promising novel interventions, displaying a significant positive impact on several NOF fracture outcomes. Owing to the novel nature of e-pathways and digital systems in orthopaedics, a limited number of studies were identified for review, each with variable study design. More high quality homogenous prospective cohort studies with a standardised primary outcome measure are required for more definitive conclusions of efficacy to be drawn.
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Affiliation(s)
| | - K Curlewis
- Royal Free London NHS Foundation Trust, UK
| | - A Vusirikala
- Royal National Orthopaedic Hospital NHS Trust, UK
| | | | - A Patel
- University College London, UK
- Royal Free London NHS Foundation Trust, UK
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V. KK, Mahendiran R, Subramanian P, Karthikeyan S, Surendrakumar A, Kumargouda V, Y. R, Choudhary S, Singh R, Verma AK. Optimization of biogas potential using kinetic models, response surface methodology, and instrumental evidence for biodegradation of tannery fleshings during anaerobic digestion. Open Life Sci 2023; 18:20220721. [PMID: 37744453 PMCID: PMC10512448 DOI: 10.1515/biol-2022-0721] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/23/2023] [Revised: 06/01/2023] [Accepted: 08/16/2023] [Indexed: 09/26/2023] Open
Abstract
The optimization of the batch size experiment was run for a hydraulic retention time of 45 days using proteolytic enzyme pretreatment. The highest amounts of biogas were produced in comparison to conventional BDS (25:75), which is not processed with enzymes, and there was an increase in the biogas generation of 13.9 and 18.57%. The kinetic models show the goodness of fit between 0.993 and 0.998 and the correlation coefficient's value domain was [-1, 1] from a statistical perspective. The Box-Behnken design was carried out using the response surface methodology at different levels of independent parameters to optimize the process. Different instruments were evaluated to determine the chemical structure change and the contamination of the different treatments and the raw sample of tannery fleshings was determined. Thermogravimetric analysis was conducted to determine the loss of weight on thermal degradation. The Fourier transform infrared spectrometry was carried out to determine the different functional groups, such as -OH, -CH, -NH, and C-O, present in the samples of tannery fleshings. Scanning electron microscopy and energy dispersive X-ray analysis were carried out to determine the morphological alterations in the substrate, digestate, enzyme-pretreated fleshings, and the chemical composition of samples.
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Affiliation(s)
- Kavan Kumar V.
- Department of Renewable Energy Engineering, CTAE, MPUAT, Udaipur, Rajasthan, 313001, India
| | - R. Mahendiran
- Department of Renewable Energy Engineering, Agricultural Engineering College and Research Institute, TNAU, Coimbatore, Tamil Nadu, 641003, India
| | - P. Subramanian
- Department of Agricultural Engineering, Agricultural Engineering College and Research Institute, TNAU, Coimbatore, Tamil Nadu, 641003, India
| | - S. Karthikeyan
- Post Harvest Technology Centre, Agricultural Engineering College and Research Institute, TNAU, Coimbatore, Tamil Nadu, 641003, India
| | - A. Surendrakumar
- Department of Farm Machinery and Power, Agricultural Engineering College and Research Institute, TNAU, Coimbatore, Tamil Nadu, 641003, India
| | - V. Kumargouda
- Department of Processing and Food Engineering, College of Agricultural Engineering, UAS, GKVK, Bangalore, Karnataka, 560065, India
| | - Ravi Y.
- ICAR-National Research Centre Seed Spices, Ajmer, Rajasthan, 305206, India
| | - Sharda Choudhary
- ICAR-National Research Centre Seed Spices, Ajmer, Rajasthan, 305206, India
| | - Ravindra Singh
- ICAR-National Research Centre Seed Spices, Ajmer, Rajasthan, 305206, India
| | - Arvind K. Verma
- ICAR-National Research Centre Seed Spices, Ajmer, Rajasthan, 305206, India
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Rossi SL, Subramanian P, Bovenkamp DE. The future is precision medicine-guided diagnoses, preventions and treatments for neurodegenerative diseases. Front Aging Neurosci 2023; 15:1128619. [PMID: 37009453 PMCID: PMC10065404 DOI: 10.3389/fnagi.2023.1128619] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/20/2022] [Accepted: 02/20/2023] [Indexed: 03/19/2023] Open
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Kumar DP, Ramesh D, Vikraman VK, Subramanian P. Synthesis of carbon molecular sieves from agricultural residues: Status, challenges and prospects. Environ Res 2022; 214:114022. [PMID: 35977589 DOI: 10.1016/j.envres.2022.114022] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/28/2022] [Revised: 07/26/2022] [Accepted: 07/29/2022] [Indexed: 06/15/2023]
Abstract
Adsorption is the most promising technology used in the gas separation and purification process. The key success of this technology relies on the selection of an adsorbent. Activated carbon and zeolites are the most commonly used adsorbents in the separation of particular gas from gaseous mixtures. Activated carbon deriving from fossil and biomass-based resources has wide pore size distribution and thereby results in lower selectivity. Whereas, zeolites synthesized from natural minerals are expensive which increases the cost of the purification process. Taking this into concern, the quest for synthesizing low-cost and effective adsorbents has gained greater attention in recent years. Carbon Molecular Sieves (CMSs), are considered as an attractive alternative to replace the conventional adsorbents. Furthermore, CMSs exhibit higher selectivity and adsorption capacity, due to their narrow micropore size distribution (0.3-0.5 nm). CMSs are synthesized from any organic carbonaceous precursor with low inorganic content. Since most of the agricultural residues fall under this category, they can be used as a feedstock for CMSs production. The synthesis of CMSs involves three stages: carbonization, activation, and pore modification. In this review, physicochemical characteristics of various agricultural residues, the effects of carbonization process parameters, activation methods, and pore modification techniques adopted for producing CMSs are comprehensively discussed. The effect of deposition temperature, time, and flow rate of depositing agent on pore characteristics of CMSs is briefed. The prospects and challenges in CMSs production are also studied. The insights in this review provide guidelines for synthesizing CMSs from agro-residues.
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Affiliation(s)
- D Praveen Kumar
- Department of Renewable Energy Engineering, Agricultural Engineering College and Research Institute, Tamil Nadu Agricultural University, Coimbatore, Tamil Nadu, 641003, India
| | - D Ramesh
- Department of Renewable Energy Engineering, Agricultural Engineering College and Research Institute, Tamil Nadu Agricultural University, Coimbatore, Tamil Nadu, 641003, India.
| | - V Karuppasamy Vikraman
- Department of Renewable Energy Engineering, Agricultural Engineering College and Research Institute, Tamil Nadu Agricultural University, Coimbatore, Tamil Nadu, 641003, India
| | - P Subramanian
- Department of Renewable Energy Engineering, Agricultural Engineering College and Research Institute, Tamil Nadu Agricultural University, Coimbatore, Tamil Nadu, 641003, India
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Rossi SL, Subramanian P, Bu G, Di Polo A, Golde TE, Bovenkamp DE. Common features of neurodegenerative disease: exploring the brain-eye connection and beyond (part 2): the 2021 pre-symposium of the 15th international conference on Alzheimer's and Parkinson's diseases. Mol Neurodegener 2022; 17:69. [PMID: 36316783 PMCID: PMC9623952 DOI: 10.1186/s13024-022-00571-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Key Words] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/15/2022] [Accepted: 09/23/2022] [Indexed: 11/28/2022] Open
Affiliation(s)
- Sharyn L. Rossi
- grid.453152.40000 0000 8621 6363BrightFocus Foundation, 22512 Gateway Center Dr, Clarksburg, 20871 MD USA
| | - Preeti Subramanian
- grid.453152.40000 0000 8621 6363BrightFocus Foundation, 22512 Gateway Center Dr, Clarksburg, 20871 MD USA
| | - Guojun Bu
- grid.417467.70000 0004 0443 9942Department of Neuroscience, Mayo Clinic, Jacksonville, FL USA
| | - Adriana Di Polo
- grid.14848.310000 0001 2292 3357Departments of Neuroscience and Ophthalmology, Centre de recherche du Centre Hospitalier de l’Université de Montréal (CRCHUM), University of Montreal, Montreal, QC Canada
| | - Todd E. Golde
- grid.15276.370000 0004 1936 8091Departments of Neuroscience and Neurology, Norman Fixel Institute for Neurological Diseases, Center for Translational Research in Neurodegenerative Disease, Evelyn F. and William L. McKnight Brain Institute, University of Florida, Gainesville, Fl USA ,grid.189967.80000 0001 0941 6502Departments of Pharmacology & Chemical Biology, and Neurology, Center for Neurodegenerative Disease, Emory University, School of Medicine, Atlanta, GA USA
| | - Diane E. Bovenkamp
- grid.453152.40000 0000 8621 6363BrightFocus Foundation, 22512 Gateway Center Dr, Clarksburg, 20871 MD USA
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6
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Rossi SL, Subramanian P, Bu G, Di Polo A, Golde TE, Bovenkamp DE. Common features of neurodegenerative disease: exploring the brain-eye connection and beyond (Part 1): the 2021 pre-symposium of the 15th international conference on Alzheimer's and Parkinson's diseases. Mol Neurodegener 2022; 17:68. [PMID: 36310167 PMCID: PMC9620636 DOI: 10.1186/s13024-022-00570-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Key Words] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/17/2022] [Accepted: 09/23/2022] [Indexed: 11/05/2022] Open
Affiliation(s)
- Sharyn L. Rossi
- grid.453152.40000 0000 8621 6363BrightFocus Foundation, 22512 Gateway Center Dr, 20871 Clarksburg, MD USA
| | - Preeti Subramanian
- grid.453152.40000 0000 8621 6363BrightFocus Foundation, 22512 Gateway Center Dr, 20871 Clarksburg, MD USA
| | - Guojun Bu
- grid.417467.70000 0004 0443 9942Department of Neuroscience, Mayo Clinic, Jacksonville, FL USA
| | - Adriana Di Polo
- grid.14848.310000 0001 2292 3357Departments of Neuroscience and Ophthalmology, Centre de recherche du Centre Hospitalier de l’Université de Montréal (CRCHUM), University of Montreal, Montreal, QC Canada
| | - Todd E. Golde
- grid.189967.80000 0001 0941 6502Departments of Pharmacology & Chemical Biology, and Neurology, Center for Neurodegenerative Disease, Emory University, School of Medicine, Atlanta, GA USA
| | - Diane E. Bovenkamp
- grid.453152.40000 0000 8621 6363BrightFocus Foundation, 22512 Gateway Center Dr, 20871 Clarksburg, MD USA
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7
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Subramanian P, Knobloch E, Kevrekidis PG. Forced symmetry breaking as a mechanism for rogue bursts in a dissipative nonlinear dynamical lattice. Phys Rev E 2022; 106:014212. [PMID: 35974514 DOI: 10.1103/physreve.106.014212] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/18/2022] [Accepted: 05/31/2022] [Indexed: 06/15/2023]
Abstract
We propose an alternative to the standard mechanisms for the formation of rogue waves in a nonconservative, nonlinear lattice dynamical system. We consider an ordinary differential equation (ODE) system that features regular periodic bursting arising from forced symmetry breaking. We then connect such potentially exploding units via a diffusive lattice coupling and investigate the resulting spatiotemporal dynamics for different types of initial conditions (localized or extended). We find that in both cases, particular oscillators undergo extremely fast and large amplitude excursions, resembling a rogue wave burst. Furthermore, the probability distribution of different amplitudes exhibits bimodality, with peaks at both vanishing and very large amplitude. While this phenomenology arises over a range of coupling strengths, for large values thereof the system eventually synchronizes and the above phenomenology is suppressed. We use both distributed (such as a synchronization order parameter) and individual oscillator diagnostics to monitor the dynamics and identify potential precursors to large amplitude excursions. We also examine similar behavior with amplitude-dependent diffusive coupling.
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Affiliation(s)
- P Subramanian
- Department of Mathematics, University of Auckland, 38 Princes Street, Auckland 1010, New Zealand
- Mathematical Institute, University of Oxford, Oxford OX2 6GG, United Kingdom
| | - E Knobloch
- Department of Physics, University of California at Berkeley, Berkeley, California 94720, USA
| | - P G Kevrekidis
- Department of Mathematics and Statistics, University of Massachusetts, Amherst, Massachusetts 01003-4515, USA
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8
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Wareham LK, Liddelow SA, Temple S, Benowitz LI, Di Polo A, Wellington C, Goldberg JL, He Z, Duan X, Bu G, Davis AA, Shekhar K, Torre AL, Chan DC, Canto-Soler MV, Flanagan JG, Subramanian P, Rossi S, Brunner T, Bovenkamp DE, Calkins DJ. Solving neurodegeneration: common mechanisms and strategies for new treatments. Mol Neurodegener 2022; 17:23. [PMID: 35313950 PMCID: PMC8935795 DOI: 10.1186/s13024-022-00524-0] [Citation(s) in RCA: 72] [Impact Index Per Article: 36.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/17/2021] [Accepted: 02/18/2022] [Indexed: 02/06/2023] Open
Abstract
Across neurodegenerative diseases, common mechanisms may reveal novel therapeutic targets based on neuronal protection, repair, or regeneration, independent of etiology or site of disease pathology. To address these mechanisms and discuss emerging treatments, in April, 2021, Glaucoma Research Foundation, BrightFocus Foundation, and the Melza M. and Frank Theodore Barr Foundation collaborated to bring together key opinion leaders and experts in the field of neurodegenerative disease for a virtual meeting titled "Solving Neurodegeneration". This "think-tank" style meeting focused on uncovering common mechanistic roots of neurodegenerative disease and promising targets for new treatments, catalyzed by the goal of finding new treatments for glaucoma, the world's leading cause of irreversible blindness and the common interest of the three hosting foundations. Glaucoma, which causes vision loss through degeneration of the optic nerve, likely shares early cellular and molecular events with other neurodegenerative diseases of the central nervous system. Here we discuss major areas of mechanistic overlap between neurodegenerative diseases of the central nervous system: neuroinflammation, bioenergetics and metabolism, genetic contributions, and neurovascular interactions. We summarize important discussion points with emphasis on the research areas that are most innovative and promising in the treatment of neurodegeneration yet require further development. The research that is highlighted provides unique opportunities for collaboration that will lead to efforts in preventing neurodegeneration and ultimately vision loss.
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Affiliation(s)
- Lauren K Wareham
- Department of Ophthalmology and Visual Sciences, Vanderbilt Eye Institute, Vanderbilt University Medical Center, Nashville, TN, USA
| | - Shane A Liddelow
- Neuroscience Institute, NYU Grossman School of Medicine, New York, NY, USA
| | - Sally Temple
- Neural Stem Cell Institute, NY, 12144, Rensselaer, USA
| | - Larry I Benowitz
- Department of Neurosurgery and F.M. Kirby Neurobiology Center, Boston Children's Hospital, Harvard Medical School, Boston, MA, USA
| | - Adriana Di Polo
- Department of Neuroscience, University of Montreal, Montreal, QC, Canada
| | - Cheryl Wellington
- Department of Pathology and Laboratory Medicine, University of British Columbia, Vancouver, BC, Canada
| | - Jeffrey L Goldberg
- Spencer Center for Vision Research, Byers Eye Institute, Stanford University, CA, Palo Alto, USA
| | - Zhigang He
- F.M. Kirby Neurobiology Center, Boston Children's Hospital, MA, Boston, USA
| | - Xin Duan
- Department of Ophthalmology, University of California San Francisco, San Francisco, CA, USA
| | - Guojun Bu
- Department of Neuroscience, Mayo Clinic, Jacksonville, FL, USA
| | - Albert A Davis
- Department of Neurology, Washington University in St. Louis, St. Louis, Missouri, USA
| | - Karthik Shekhar
- Department of Chemical and Biomolecular Engineering and Helen Wills Neuroscience Institute, University of California Berkeley, Berkeley, CA, USA
| | - Anna La Torre
- Department of Cell Biology and Human Anatomy, University of California Davis, Davis, CA, USA
| | - David C Chan
- Division of Biology and Biological Engineering, California Institute of Technology, CA, 91125, Pasadena, USA
| | - M Valeria Canto-Soler
- CellSight Ocular Stem Cell and Regeneration Research Program, Department of Ophthalmology, Sue Anschutz-Rodgers Eye Center, University of Colorado, Aurora, CO, USA
| | - John G Flanagan
- Herbert Wertheim School of Optometry and Vision Science, University of California Berkeley, Berkeley, CA, USA
| | | | | | | | | | - David J Calkins
- Department of Ophthalmology and Visual Sciences, Vanderbilt Eye Institute, Vanderbilt University Medical Center, Nashville, TN, USA.
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9
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McDowell CM, Kizhatil K, Elliott MH, Overby DR, van Batenburg-Sherwood J, Millar JC, Kuehn MH, Zode G, Acott TS, Anderson MG, Bhattacharya SK, Bertrand JA, Borras T, Bovenkamp DE, Cheng L, Danias J, De Ieso ML, Du Y, Faralli JA, Fuchshofer R, Ganapathy PS, Gong H, Herberg S, Hernandez H, Humphries P, John SWM, Kaufman PL, Keller KE, Kelley MJ, Kelly RA, Krizaj D, Kumar A, Leonard BC, Lieberman RL, Liton P, Liu Y, Liu KC, Lopez NN, Mao W, Mavlyutov T, McDonnell F, McLellan GJ, Mzyk P, Nartey A, Pasquale LR, Patel GC, Pattabiraman PP, Peters DM, Raghunathan V, Rao PV, Rayana N, Raychaudhuri U, Reina-Torres E, Ren R, Rhee D, Chowdhury UR, Samples JR, Samples EG, Sharif N, Schuman JS, Sheffield VC, Stevenson CH, Soundararajan A, Subramanian P, Sugali CK, Sun Y, Toris CB, Torrejon KY, Vahabikashi A, Vranka JA, Wang T, Willoughby CE, Xin C, Yun H, Zhang HF, Fautsch MP, Tamm ER, Clark AF, Ethier CR, Stamer WD. Consensus Recommendation for Mouse Models of Ocular Hypertension to Study Aqueous Humor Outflow and Its Mechanisms. Invest Ophthalmol Vis Sci 2022; 63:12. [PMID: 35129590 PMCID: PMC8842499 DOI: 10.1167/iovs.63.2.12] [Citation(s) in RCA: 19] [Impact Index Per Article: 9.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/03/2021] [Accepted: 12/08/2021] [Indexed: 01/07/2023] Open
Abstract
Due to their similarities in anatomy, physiology, and pharmacology to humans, mice are a valuable model system to study the generation and mechanisms modulating conventional outflow resistance and thus intraocular pressure. In addition, mouse models are critical for understanding the complex nature of conventional outflow homeostasis and dysfunction that results in ocular hypertension. In this review, we describe a set of minimum acceptable standards for developing, characterizing, and utilizing mouse models of open-angle ocular hypertension. We expect that this set of standard practices will increase scientific rigor when using mouse models and will better enable researchers to replicate and build upon previous findings.
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Affiliation(s)
- Colleen M. McDowell
- Department of Ophthalmology and Visual Sciences, University of Wisconsin–Madison, Madison, Wisconsin, United States
| | | | - Michael H. Elliott
- University of Oklahoma Health Sciences Center, Oklahoma City, Oklahoma, United States
| | - Darryl R. Overby
- Department of Bioengineering, Imperial College London, United Kingdom
| | | | - J. Cameron Millar
- Department of Pharmacology & Neuroscience, and North Texas Eye Research Institute, University of North Texas Health Science Center, Fort Worth, Texas, United States
| | - Markus H. Kuehn
- Department of Ophthalmology and Visual Sciences and Institute for Vision Research, The University of Iowa; Center for the Prevention and Treatment of Visual Loss, Veterans Affairs Medical Center, Iowa City, Iowa, United States
| | - Gulab Zode
- Department of Pharmacology & Neuroscience, and North Texas Eye Research Institute, University of North Texas Health Science Center, Fort Worth, Texas, United States
| | - Ted S. Acott
- Ophthalmology and Biochemistry and Molecular Biology, Casey Eye Institute, Oregon Health & Science University, Portland, Oregon, United States
| | - Michael G. Anderson
- Department of Molecular Physiology and Biophysics and Department of Ophthalmology and Visual Sciences, The University of Iowa; Center for the Prevention and Treatment of Visual Loss, Veterans Affairs Medical Center, Iowa City, Iowa, United States
| | | | - Jacques A. Bertrand
- Department of Bioengineering, Imperial College London, London, United Kingdom
| | - Terete Borras
- University of North Carolina at Chapel Hill, Chapel Hill, North Carolina, United States
| | | | - Lin Cheng
- Department of Ophthalmology and Visual Sciences, University of Iowa, Iowa City, Iowa, United States
| | - John Danias
- SUNY Downstate Health Sciences University, Brooklyn, New York, United States
| | - Michael Lucio De Ieso
- Department of Ophthalmology, Duke Eye Center, Duke University, Durham, North Carolina, United States
| | - Yiqin Du
- Department of Ophthalmology, University of Pittsburgh, Pennsylvania, United States
| | - Jennifer A. Faralli
- Department of Pathology and Laboratory Medicine, University of Wisconsin–Madison, Madison, Wisconsin, United States
| | - Rudolf Fuchshofer
- Institute of Human Anatomy and Embryology, University of Regensburg, Regensburg, Germany
| | - Preethi S. Ganapathy
- Department of Ophthalmology and Visual Sciences, SUNY Upstate Medical University, Syracuse, New York, United States
| | - Haiyan Gong
- Department of Ophthalmology, Boston University School of Medicine, Boston, Massachusetts, United States
| | - Samuel Herberg
- Department of Ophthalmology and Visual Sciences, SUNY Upstate Medical University, Syracuse, New York, United States
| | | | - Peter Humphries
- Smurfit Institute of Genetics, Trinity College Dublin, Dublin, Ireland
| | - Simon W. M. John
- Department of Ophthalmology, Columbia University, New York, New York, United States
| | - Paul L. Kaufman
- Department of Ophthalmology and Visual Sciences, University of Wisconsin–Madison, Madison, Wisconsin, United States
| | - Kate E. Keller
- Casey Eye Institute, Oregon Health & Science University, Portland, Oregon, United States
| | - Mary J. Kelley
- Department of Ophthalmology and Department of Integrative Biosciences, Oregon Health & Science University, Portland, Oregon, United States
| | - Ruth A. Kelly
- Ocular Genetics Unit, Smurfit Institute of Genetics, Trinity College Dublin, Dublin, Ireland
| | - David Krizaj
- Department of Ophthalmology, University of Utah School of Medicine, Salt Lake City, Utah, United States
| | - Ajay Kumar
- Department of Ophthalmology, University of Pittsburgh, Pennsylvania, United States
| | - Brian C. Leonard
- Department of Surgical and Radiological Sciences, University of California, Davis, Davis, California, United States
| | - Raquel L. Lieberman
- Department of Chemistry and Biochemistry, Georgia Institute of Technology, Atlanta, Georgia, United States
| | - Paloma Liton
- Department of Ophthalmology and Department of Pathology, Duke University, Durham, North Carolina, United States
| | - Yutao Liu
- Department of Cellular Biology and Anatomy, James & Jean Culver Vision Discovery Institute, Augusta University, Augusta, Georgia, United States
| | - Katy C. Liu
- Duke Eye Center, Duke Health, Durham, North Carolina, United States
| | - Navita N. Lopez
- Department of Neurobiology, University of Utah, Salt Lake City, Utah, United States
| | - Weiming Mao
- Department of Ophthalmology, Indiana University School of Medicine, Indianapolis, Indiana, United States
| | - Timur Mavlyutov
- Department of Ophthalmology and Visual Sciences, University of Wisconsin–Madison, Madison, Wisconsin, United States
| | - Fiona McDonnell
- Duke Eye Center, Duke Health, Durham, North Carolina, United States
| | - Gillian J. McLellan
- Department of Surgical Sciences and Department of Ophthalmology and Visual Sciences, University of Wisconsin–Madison, Madison, Wisconsin, United States
| | - Philip Mzyk
- Department of Ophthalmology and Visual Sciences, University of Wisconsin–Madison, Madison, Wisconsin, United States
| | - Andrews Nartey
- College of Optometry, University of Houston, Houston, Texas, United States
| | - Louis R. Pasquale
- Department of Ophthalmology, Icahn School of Medicine at Mount Sinai, New York, New York, United States
| | - Gaurang C. Patel
- Ophthalmology Research, Regeneron Pharmaceuticals, Tarreytown, New York, United States
| | | | - Donna M. Peters
- Department of Pathology and Laboratory Medicine, University of Wisconsin–Madison, Madison, Wisconsin, United States
| | | | - Ponugoti Vasantha Rao
- Department of Ophthalmology, Duke University School of Medicine, Durham, North Carolina, United States
| | - Naga Rayana
- Department of Ophthalmology, Indiana University School of Medicine, Indianapolis, Indiana, United States
| | - Urmimala Raychaudhuri
- Department of Neurobiology, University of California, Irvine, Irvine, California, United States
| | - Ester Reina-Torres
- Department of Bioengineering, Imperial College London, London, United Kingdom
| | - Ruiyi Ren
- Department of Ophthalmology, Boston University School of Medicine, Boston, Massachusetts, United States
| | - Douglas Rhee
- Case Western Reserve University School of Medicine, Cleveland, Ohio, United States
| | - Uttio Roy Chowdhury
- Department of Ophthalmology, Mayo Clinic, Rochester, Minnesota, United States
| | - John R. Samples
- Washington State University, Floyd Elson College of Medicine, Spokane, Washington, United States
| | | | - Najam Sharif
- Santen Inc., Emeryville, California, United States
| | - Joel S. Schuman
- Department of Ophthalmology and Department of Physiology and Neuroscience, NYU Grossman School of Medicine, NYU Langone Health, New York University, New York, New York, United States; Departments of Biomedical Engineering and Electrical and Computer Engineering, New York University Tandon School of Engineering, Brooklyn, New York, United States; Center for Neural Science, College of Arts and Science, New York University, New York, New York, United States
| | - Val C. Sheffield
- Department of Pediatrics and Department of Ophthalmology and Visual Sciences, University of Iowa Carver College of Medicine, Iowa City, Iowa, United States
| | - Cooper H. Stevenson
- Department of Pharmacology & Neuroscience, and North Texas Eye Research Institute, University of North Texas Health Science Center, Fort Worth, Texas, United States
| | - Avinash Soundararajan
- Department of Ophthalmology, Indiana University School of Medicine, Indianapolis, Indiana, United States
| | | | - Chenna Kesavulu Sugali
- Department of Ophthalmology, Indiana University School of Medicine, Indianapolis, Indiana, United States
| | - Yang Sun
- Veterans Affairs Palo Alto Health Care System, Stanford University, Palo Alto, California, United States
| | - Carol B. Toris
- Department of Ophthalmology and Visual Sciences, University of Nebraska Medical Center, Omaha, Nebraska, United States; Department of Ophthalmology and Vision Sciences, The Ohio State University, Columbus, Ohio, United States
| | | | - Amir Vahabikashi
- Cell and Developmental Biology Department, Northwestern University, Chicago, Illinois, United States
| | - Janice A. Vranka
- Department of Ophthalmology, Casey Eye Institute, Oregon Health & Science University, Portland, Oregon, United States
| | - Ting Wang
- Department of Ophthalmology, Indiana University School of Medicine, Indianapolis, Indiana, United States
| | - Colin E. Willoughby
- Genomic Medicine, Biomedical Sciences Research Institute, Ulster University, Coleraine, Northern Ireland, United Kingdom
| | - Chen Xin
- Beijing Institute of Ophthalmology, Beijing Tongren Eye Center, Beijing Tongren Hospital, Capital Medical University, Beijing, China
| | - Hongmin Yun
- Department of Ophthalmology, University of Pittsburgh, Pittsburgh, Pennsylvania, United States
| | - Hao F. Zhang
- Biomedical Engineering Department, Northwestern University, Evanston, Illinois, United States
| | - Michael P. Fautsch
- Biomedical Engineering Department, Northwestern University, Evanston, Illinois, United States
| | | | - Abbot F. Clark
- Department of Pharmacology and Neuroscience, North Texas Eye Research Institute, University of North Texas Health Science Center, Fort Worth, Texas, United States
| | - C. Ross Ethier
- Wallace H. Coulter Department of Biomedical Engineering, Georgia Institute of Technology; Emory University School of Medicine, Emory University, Atlanta, Georgia, United States
| | - W. Daniel Stamer
- Duke Ophthalmology, Duke University, Durham, North Carolina, United States
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Kavan Kumar V, Mahendiran R, Subramanian P, Karthikeyan S, Surendrakumar A. Optimization of inoculum to substrate ratio for enhanced methane yield from leather fleshings in a batch study. J INDIAN CHEM SOC 2022. [DOI: 10.1016/j.jics.2022.100384] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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Subramanian P, David SA. Biogenesis of Zirconium Oxide Nanoparticles by Momordica charantia (Bitter Gourd) Leaf Extract: Characterization and their Antimicrobial Activities. JPRI 2021. [DOI: 10.9734/jpri/2021/v33i61b35608] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Abstract
Aims: To determine the antimicrobial activity of zirconium oxide nanoparticles (ZrO2 NPs) synthesized by Justicia Adhatoda leaf extract.
Study Design: Synthesis, characterization and antibacterial activity determination of ZrO2 NPs.
Place and Duration of Study: PG and Research Department of Chemistry, V.O.Chidambaram College, Tuticorin, Tamilnadu, India, between April 2020 and April 2021.
Methodology: Justicia adhatoda leaf extract was used to synthesize ZrO2 NPs. UV-Visible spectroscopy was used to characterize ZrO2 NPs. Using Fourier transform infrared spectroscopy, the function of biomolecules in plant extract in the synthesis of ZrO2 NPs was identified. XRD was used to determine the particle size of nanparticles. ZrO2 NPs were evaluated for antimicrobial activity.
Results: The synthesis of ZrO2 NPs was clearly visible in an absorbance band at 321 nm in the UV–visible spectrum. The absorption peak of ZrO2 NPs in the FTIR was 880 cm-1, confirming the Zr–O vibrational mode in ZrO2 NPs. As evidenced by XRD measurements, the average crystallite size of ZrO2 NPs was found to be 40 nm. The biosynthesized ZrO2 NPs were found to have potent antibacterial action against Escherichia coli bacteria and Staphylococcus aureus bacteria.
Conclusion: ZrO2 NPs mediated by Justicia adhatoda leaf extract have demonstrated substantial antibacterial activity
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David SA, Subramanian P. Antibacterial Activity of CuO Nanoparticles Synthesized by Justicia adhatoda Leaf Extract. JPRI 2021. [DOI: 10.9734/jpri/2021/v33i56b33941] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Abstract
Aims: To determine the antibacterial activity of CuO nanoparticles (CuO NPs) synthesized by Justicia adhatoda leaf extract.
Study Design: Synthesis, characterization and antibacterial activity determination of CuO NPs.
Place and Duration of Study: PG and Research Department of Chemistry, V.O.Chidambaram College, Tuticorin, Tamilnadu, India, between April 2019 and April 2020.
Methodology: CuO NPs were synthesised using Justicia adhatoda leaf extract. UV-Visible spectroscopy was used to characterize CuO NPs. The role of biomolecules in plant extract in the formation of the CuO NPs was identified using Fourier transform infrared spectroscopy. The particle size and lattice properties of CuO NPs were determined using XRD. The surface morphology of CuO NPs was studied using SEM. The presence of Cu and O in CuO NPs was confirmed using EDAX analysis. Bacterial antimicrobial activity was investigated.
Results: An absorbance band at 285 nm in the UV–visible spectrum clearly revealed the formation of CuO NPs. In the FTIR, CuO NPs had a distinct absorption peak at 608 cm-1, confirming metal–oxygen stretching in Cu-O nanostructures. The presence of crystalline CuO NPs was confirmed by XRD patterns, and they were found to be spherical in shape with a size range of 23.21–37.57 nm, as evidenced by FESEM. The biosynthesized CuO NPs exhibited a strong antibacterial activity against Staphylococcus epidermidis and Bacillus cereus bacteria.
Conclusion: Justicia adhatoda leaf extract mediated CuO NPs have shown significant antibacterial activity and they are considered potent antibacterial agents.
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Karuppasamy Vikraman V, Praveen Kumar D, Boopathi G, Subramanian P. Kinetic and thermodynamic study of finger millet straw pyrolysis through thermogravimetric analysis. Bioresour Technol 2021; 342:125992. [PMID: 34583115 DOI: 10.1016/j.biortech.2021.125992] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/02/2021] [Revised: 09/17/2021] [Accepted: 09/18/2021] [Indexed: 06/13/2023]
Abstract
Pyrolysis kinetics of finger millet straw (FMS) was studied using a thermogravimetric analyzer under N2 environment. Physico-chemical characteristics of FMS were comparable with the established pyrolysis feedstocks. FMS thermally decomposed in three stages: drying, active pyrolysis, and char formation resulting in 70.37% overall weight loss. Average activation energy determined by Friedman and Starink methods was 177.80 and 172.18 kJ mol-1, respectively. Frequency factor was found to be in the range of 108 to 1029. Reaction pathway followed diffusion, nucleation, and order-based mechanisms. The pyrolysis of FMS was characterized by empirical modeling and predicted well with model adequacy of 97.55%. Thermodynamic parameters (ΔG and ΔH) revealed the non-spontaneous and endothermic nature of FMS pyrolysis. The biochar obtained at multiple heating rates were characterized for its physicochemical, functional, and morphological characteristics. The kinetic and thermodynamic analyses illustrate the feasibility of exploiting finger millet straw as a pyrolysis feedstock to derive biofuels.
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Affiliation(s)
- V Karuppasamy Vikraman
- Department of Renewable Energy Engineering, Agricultural Engineering College and Research Institute, Tamil Nadu Agricultural University, Coimbatore, Tamil Nadu 641003, India
| | - D Praveen Kumar
- Department of Renewable Energy Engineering, Agricultural Engineering College and Research Institute, Tamil Nadu Agricultural University, Coimbatore, Tamil Nadu 641003, India
| | - G Boopathi
- Department of Agricultural Engineering, Amrita School of Agricultural Sciences, Amrita Vishwa Vidyapeetham, Coimbatore, Tamil Nadu 642109, India.
| | - P Subramanian
- Department of Renewable Energy Engineering, Agricultural Engineering College and Research Institute, Tamil Nadu Agricultural University, Coimbatore, Tamil Nadu 641003, India
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Subramanian P, Ratliff DJ, Rucklidge AM, Archer AJ. Density Distribution in Soft Matter Crystals and Quasicrystals. Phys Rev Lett 2021; 126:218003. [PMID: 34114856 DOI: 10.1103/physrevlett.126.218003] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/13/2020] [Revised: 04/15/2021] [Accepted: 04/20/2021] [Indexed: 06/12/2023]
Abstract
The density distribution in solids is often represented as a sum of Gaussian peaks (or similar functions) centered on lattice sites or via a Fourier sum. Here, we argue that representing instead the logarithm of the density distribution via a Fourier sum is better. We show that truncating such a representation after only a few terms can be highly accurate for soft matter crystals. For quasicrystals, this sum does not truncate so easily, nonetheless, representing the density profile in this way is still of great use, enabling us to calculate the phase diagram for a three-dimensional quasicrystal-forming system using an accurate nonlocal density functional theory.
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Affiliation(s)
- P Subramanian
- Mathematical Institute, University of Oxford, Oxford OX2 6GG, United Kingdom
| | - D J Ratliff
- Department of Mathematical Sciences and Interdisciplinary Centre for Mathematical Modelling, Loughborough University, Loughborough LE11 3TU, United Kingdom
- Department of Mathematics, Physics and Electrical Engineering, Northumbria University, Newcastle upon Tyne NE1 8ST, United Kingdom
| | - A M Rucklidge
- School of Mathematics, University of Leeds, Leeds LS2 9JT, United Kingdom
| | - A J Archer
- Department of Mathematical Sciences and Interdisciplinary Centre for Mathematical Modelling, Loughborough University, Loughborough LE11 3TU, United Kingdom
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Madanipour S, Al-Obaedi O, Ayub A, Iranpour F, Subramanian P. Resuming elective hip and knee arthroplasty in the COVID-19 era: a unique insight into patient risk aversion and sentiment. Ann R Coll Surg Engl 2021; 103:104-109. [PMID: 33185459 PMCID: PMC9773923 DOI: 10.1308/rcsann.2020.7012] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022] Open
Abstract
INTRODUCTION There has been guidance from the government and orthopaedic community on how best to ensure the safety of our patients and colleagues as we recommence elective surgery in the UK. The primary aim was to determine what proportion of patients feel they should proceed with their elective hip and knee arthroplasty surgery during the COVID-19 climate. The secondary aim was to investigate what variables affected this decision. METHODS Patient information from a single surgeon's waiting list in a district general hospital were recorded. A standardised telephone discussion was had with all the patients noting the severity of pain and the potential reasons for not wanting to proceed with surgery. RESULTS A total of 70.6% (96/136) of patients wished to proceed with surgery; 29.4% (40/136) did not wish to proceed. The decision to proceed with surgery was not correlated with sex, American Society of Anesthesiologists grade or COVID-19 risk. Those who wished to proceed with surgery had a mean age of 68.5 years while those who did not had a mean age of 72.4 years (P = 0.03). Within the matched subgroups, patients under the age of 70 years were more willing to proceed with primary hip arthroplasty surgery (87.9%) compared with primary knee arthroplasty surgery (57.1%; P = 0.007); 75% of the patients who did not wish to proceed with surgery expressed concerns about perioperative COVID-19 infection. CONCLUSION There is a significant proportion of arthroplasty patients on waiting lists who would be willing to accept the increased risks associated with COVID-19 to undergo surgery on an urgent basis. The subgroup of younger patients awaiting hip arthroplasty is more willing than those awaiting knee arthroplasty to proceed with surgery.
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Affiliation(s)
- S Madanipour
- Trauma and Orthopaedics, Royal Free NHS Trust (Barnet and Chase Farm Hospitals), Barnet, UK
| | - O Al-Obaedi
- Trauma and Orthopaedics, Royal Free NHS Trust (Barnet and Chase Farm Hospitals), Barnet, UK
| | - A Ayub
- Trauma and Orthopaedics, Royal Free NHS Trust (Barnet and Chase Farm Hospitals), Barnet, UK
| | - F Iranpour
- Trauma and Orthopaedics, Royal Free NHS Trust (Barnet and Chase Farm Hospitals), Barnet, UK
| | - P Subramanian
- Trauma and Orthopaedics, Royal Free NHS Trust (Barnet and Chase Farm Hospitals), Barnet, UK
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Patel AB, Iranpour F, Subramanian P. The Mayo cover washout technique. Ann R Coll Surg Engl 2021; 103:141-142. [PMID: 33559546 PMCID: PMC9773913 DOI: 10.1308/rcsann.2020.7054] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022] Open
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17
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Burns S, Subramanian P. The 'double scalpel' scar excision technique. Ann R Coll Surg Engl 2020; 103:77. [PMID: 32981354 DOI: 10.1308/rcsann.2020.0208] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022] Open
Affiliation(s)
- S Burns
- Whittington Hospital, London, UK
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Subramanian P, Juliet sheela K, Radha Krishnan S, Shanmugam V. Elucidation of site symmetry, location, bond, ground state of Cu2+ ions in lithium sulphate monohydrate single crystal through EPR and optical studies. J Mol Struct 2020. [DOI: 10.1016/j.molstruc.2019.127586] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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Ratliff DJ, Archer AJ, Subramanian P, Rucklidge AM. Which Wave Numbers Determine the Thermodynamic Stability of Soft Matter Quasicrystals? Phys Rev Lett 2019; 123:148004. [PMID: 31702194 DOI: 10.1103/physrevlett.123.148004] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/15/2019] [Indexed: 06/10/2023]
Abstract
For soft matter to form quasicrystals an important ingredient is to have two characteristic length scales in the interparticle interactions. To be more precise, for stable quasicrystals, periodic modulations of the local density distribution with two particular wave numbers should be favored, and the ratio of these wave numbers should be close to certain special values. So, for simple models, the answer to the title question is that only these two ingredients are needed. However, for more realistic models, where in principle all wave numbers can be involved, other wave numbers are also important, specifically those of the second and higher reciprocal lattice vectors. We identify features in the particle pair interaction potentials that can suppress or encourage density modes with wave numbers associated with one of the regular crystalline orderings that compete with quasicrystals, enabling either the enhancement or suppression of quasicrystals in a generic class of systems.
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Affiliation(s)
- D J Ratliff
- Department of Mathematical Sciences and Interdisciplinary Centre for Mathematical Modelling, Loughborough University, Loughborough, Leicestershire LE11 3TU, United Kingdom
| | - A J Archer
- Department of Mathematical Sciences and Interdisciplinary Centre for Mathematical Modelling, Loughborough University, Loughborough, Leicestershire LE11 3TU, United Kingdom
| | - P Subramanian
- School of Mathematics, University of Leeds, Leeds LS2 9JT, United Kingdom
- Mathematical Institute, University of Oxford, Oxford OX2 6GG, United Kingdom
| | - A M Rucklidge
- School of Mathematics, University of Leeds, Leeds LS2 9JT, United Kingdom
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20
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Subramanian P. Management of IIH. J Neurol Sci 2019. [DOI: 10.1016/j.jns.2019.10.125] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
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Abstract
Oxidative stress-mediated injury of the retinal pigment epithelium (RPE) can precede progressive retinal degeneration and ultimately lead to blindness (e.g., age-related macular degeneration (AMD)). The RPE expresses the PNPLA2 gene and produces its protein product PEDF-R that exhibits lipase activity. We have shown that transient PNPLA2 overexpression decreases dead-cell proteolytic activity and that synthetic peptides derived from a central region of PEDF-R efficiently protect ARPE-19 and pig primary RPE cells from oxidative stress. This study aims to evaluate the effect of loss of PNPLA2 in RPE cells undergoing oxidative stress. Loss of PNPLA2 conferred increased resistance to cells when subjected to oxidative stress.
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Affiliation(s)
- Preeti Subramanian
- Section of Protein Structure and Function, Laboratory of Retinal Cell and Molecular Biology, NEI, National Institutes of Health, Bethesda, MD, USA
| | - S Patricia Becerra
- Section of Protein Structure and Function, Laboratory of Retinal Cell and Molecular Biology, NEI, National Institutes of Health, Bethesda, MD, USA.
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22
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Miller E, Yang X, Subramanian P, Knopp M, Pardo DAD, Williams T. Dynamic Contrast Enhanced MRI Reveals Acute Changes in Vascular Permeability/Perfusion Following Stereotactic Body Radiation Therapy in Hepatocellular Carcinoma. Int J Radiat Oncol Biol Phys 2018. [DOI: 10.1016/j.ijrobp.2018.07.488] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/28/2022]
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Walters MC, Subramanian P, Archer AJ, Evans R. Structural crossover in a model fluid exhibiting two length scales: Repercussions for quasicrystal formation. Phys Rev E 2018; 98:012606. [PMID: 30110766 DOI: 10.1103/physreve.98.012606] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/28/2018] [Indexed: 06/08/2023]
Abstract
We investigate the liquid state structure of the two-dimensional model introduced by Barkan et al. [Phys. Rev. Lett. 113, 098304 (2014)10.1103/PhysRevLett.113.098304], which exhibits quasicrystalline and other unusual solid phases, focusing on the radial distribution function g(r) and its asymptotic decay r→∞. For this particular model system, we find that as the density is increased there is a structural crossover from damped oscillatory asymptotic decay with one wavelength to damped oscillatory asymptotic decay with another distinct wavelength. The ratio of these wavelengths is ≈1.932. Following the locus in the phase diagram of this structural crossover leads directly to the region where quasicrystals are found. We argue that identifying and following such a crossover line in the phase diagram towards higher densities where the solid phase(s) occur is a good strategy for finding quasicrystals in a wide variety of systems. We also show how the pole analysis of the asymptotic decay of equilibrium fluid correlations is intimately connected with the nonequilibrium growth or decay of small-amplitude density fluctuations in a bulk fluid.
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Affiliation(s)
- M C Walters
- Department of Mathematical Sciences, Loughborough University, Loughborough, LE11 3TU, United Kingdom
| | - P Subramanian
- Department of Applied Mathematics, University of Leeds, Leeds LS2 9JT, United Kingdom
| | - A J Archer
- Department of Mathematical Sciences, Loughborough University, Loughborough, LE11 3TU, United Kingdom
| | - R Evans
- H. H. Wills Physics Laboratory, University of Bristol, Bristol, BS8 1TL, United Kingdom
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Comitato A, Subramanian P, Turchiano G, Montanari M, Becerra SP, Marigo V. Pigment epithelium-derived factor hinders photoreceptor cell death by reducing intracellular calcium in the degenerating retina. Cell Death Dis 2018; 9:560. [PMID: 29752430 PMCID: PMC5948223 DOI: 10.1038/s41419-018-0613-y] [Citation(s) in RCA: 39] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/13/2017] [Revised: 04/16/2018] [Accepted: 04/19/2018] [Indexed: 12/21/2022]
Abstract
Calcium ions play a critical role in neuronal cell death. Pigment epithelium-derived factor (PEDF) is a promising neuroprotective protein for photoreceptor cells but the mechanisms mediating its effects against retinal degeneration are still not well characterized. We addressed this question in the rd1 degenerating mouse retina that bears a mutation in the Pde6b gene encoding one subunit of the phosphodiesterase enzyme. Loss of phosphodiesterase activity in rod photoreceptor cells increases cyclic guanosine monophosphate (cGMP) levels leading to a rise in intracellular calcium. Short-term treatments with recombinant human PEDF protein decreased intracellular calcium in photoreceptors in vivo. Taking advantage of calcium pump blockers, we defined that PEDF signaling acts on PMCA calcium pumps to lower intracellular calcium. PEDF restrained cell death pathways activated by high calcium levels and engaging calpains, BAX and AIF. The neurotrophic effects were mediated by the PEDF receptor (PEDF-R), encoded by the PNPLA2 gene. Finally, peptides containing the neurotrophic domain of PEDF targeted these same cell death pathways in vivo. The findings reveal rescue from death of degenerating photoreceptor cells by a PEDF-mediated preservation of intracellular calcium homeostasis.
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Affiliation(s)
- Antonella Comitato
- Department of Life Sciences, University of Modena and Reggio Emilia, Modena, Italy
| | - Preeti Subramanian
- Section of Protein Structure and Function, Laboratory of Retinal Cell and Molecular Biology, NEI, National Institutes of Health, Bethesda, MD, 20892, USA
| | - Giandomenico Turchiano
- Department of Life Sciences, University of Modena and Reggio Emilia, Modena, Italy.,Institute for Cell and Gene Therapy & Center for Chronic Immunodeficiency - University of Freiburg, Freiburg, Germany
| | - Monica Montanari
- Department of Life Sciences, University of Modena and Reggio Emilia, Modena, Italy
| | - S Patricia Becerra
- Section of Protein Structure and Function, Laboratory of Retinal Cell and Molecular Biology, NEI, National Institutes of Health, Bethesda, MD, 20892, USA
| | - Valeria Marigo
- Department of Life Sciences, University of Modena and Reggio Emilia, Modena, Italy. .,Center for Neuroscience and Neurotechnology, University of Modena and Reggio Emilia, Modena, Italy.
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Mohanty P, Arunbabu K, Aziz T, Dugad S, Gupta S, Hariharan B, Jagadeesan P, Jain A, Morris S, Nayak P, Rakshe P, Ramesh K, Rao B, Zuberi M, Hayashi Y, Kawakami S, Subramanian P, Raha S, Ahmad S, Oshima A, Shibata S, Kojima H. Was the cosmic ray burst detected by the GRAPES-3 muon telescope on 22 June 2015 caused by a transient weakening of the geomagnetic field or by an interplanetary anisotropy? Int J Clin Exp Med 2018. [DOI: 10.1103/physrevd.97.082001] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
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26
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Juliet sheela K, Krishnan SR, Shanmugam V, Subramanian P. Analysis of spin-Hamiltonian and molecular orbital coefficients of Cu 2+ doped C 8 H 11 KO 8 single crystal through EPR technique. J Mol Struct 2018. [DOI: 10.1016/j.molstruc.2017.12.076] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
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Abstract
AIM To examine the factors associated with nurses' perceptions of the quality of end-of-life care. BACKGROUND With increasing demand for hospitals to provide end-of-life care, the low quality of palliative care provided in hospital settings is an issue of growing concern in developing countries. Most dying patients receive their care from general nurses, irrespective of the nurses' specialty or level of training. METHOD A structured cross-sectional questionnaire survey was conducted of 553 nurses working at a teaching hospital in Malaysia. RESULTS The mean scores for nurses' knowledge about end-of-life care, their attitudes towards end-of-life care and the perceived quality of end-of-life care were low. The factors identified as significantly associated with the quality of end-of-life care were nurses' levels of knowledge and their attitudes towards end-of-life care. DISCUSSION Factors that contributed to the low quality of end-of-life care were inadequate knowledge and negative attitudes. These findings may reflect that end-of-life care education is not well integrated into nursing education. CONCLUSION The findings of this study suggest that there is a need to increase the nurses' level of knowledge and improve their attitude towards end-of-life care in order to enhance the quality of care provided to dying patients. IMPLICATIONS FOR NURSING AND HEALTH POLICY Nurse managers and hospital policymakers should develop strategies to enhance nurses' level of knowledge, as well as providing adequate emotional support for nurses who care for dying patients and their families. Nurses should be proactive in increasing their knowledge and adopting more positive attitudes towards end-of-life care.
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Affiliation(s)
- E O D Hussin
- Department of Nursing Science, University of Malaya, Kuala Lumpur, Malaysia
| | - L P Wong
- Department of Social and Preventive Medicine, Faculty of Medicine, University of Malaya, Kuala Lumpur, Malaysia
| | - M C Chong
- Department of Nursing Science, University of Malaya, Kuala Lumpur, Malaysia
| | - P Subramanian
- Nursing Synergy Ptd Ltd. 18.USJ 1/3K, USJ 1 Subang Jaya, 47100, Malaysia
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Simmons MK, Subramanian P, Temkin JM, Sarachan BD. Combining Medical Informatics and Bioinformatics toward Tools for Personalized Medicine. Methods Inf Med 2018. [DOI: 10.1055/s-0038-1634320] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/17/2022]
Abstract
Summary
Objectives: Key bioinformatics and medical informatics research areas need to be identified to advance knowledge and understanding of disease risk factors and molecular disease pathology in the 21st century toward new diagnoses, prognoses, and treatments. Methods: Three high-impact informatics areas are identified: predictive medicine (to identify significant correlations within clinical data using statistical and artificial intelligence methods), along with pathway informatics and cellular simulations (that combine biological knowledge with advanced informatics to elucidate molecular disease pathology).
Results: Initial predictive models have been developed for a pilot study in Huntington’s disease. An initial bioinformatics platform has been developed for the reconstruction and analysis of pathways, and work has begun on pathway simulation.
Conclusions: A bioinformatics research program has been established at GE Global Research Center as an important technology toward next generation medical diagnostics. We anticipate that 21st century medical research will be a combination of informatics tools with traditional biology wet lab research, and that this will translate to increased use of informatics techniques in the clinic.
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Kontar EP, Yu S, Kuznetsov AA, Emslie AG, Alcock B, Jeffrey NLS, Melnik VN, Bian NH, Subramanian P. Imaging spectroscopy of solar radio burst fine structures. Nat Commun 2017; 8:1515. [PMID: 29142220 PMCID: PMC5688146 DOI: 10.1038/s41467-017-01307-8] [Citation(s) in RCA: 70] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/09/2017] [Accepted: 09/08/2017] [Indexed: 11/09/2022] Open
Abstract
Solar radio observations provide a unique diagnostic of the outer solar atmosphere. However, the inhomogeneous turbulent corona strongly affects the propagation of the emitted radio waves, so decoupling the intrinsic properties of the emitting source from the effects of radio wave propagation has long been a major challenge in solar physics. Here we report quantitative spatial and frequency characterization of solar radio burst fine structures observed with the Low Frequency Array, an instrument with high-time resolution that also permits imaging at scales much shorter than those corresponding to radio wave propagation in the corona. The observations demonstrate that radio wave propagation effects, and not the properties of the intrinsic emission source, dominate the observed spatial characteristics of radio burst images. These results permit more accurate estimates of source brightness temperatures, and open opportunities for quantitative study of the mechanisms that create the turbulent coronal medium through which the emitted radiation propagates. Radio observations of the solar atmosphere provide a unique view on the non-thermal processes in the outer atmosphere. Here the authors use LOFAR observations to demonstrate that the observed radio burst characteristics are dominated by propagation effects rather than underlying emission variations.
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Affiliation(s)
- E P Kontar
- School of Physics and Astronomy, University of Glasgow, Glasgow, G12 8QQ, UK.
| | - S Yu
- New Jersey Institute of Technology, Newark, NJ, 07102, USA.,Key Laboratory of Solar Activity, National Astronomical Observatories, Chinese Academy of Sciences, Beijing, 100012, China
| | - A A Kuznetsov
- Institute of Solar-Terrestrial Physics, Irkutsk, 664033, Russia
| | - A G Emslie
- Department of Physics & Astronomy, Western Kentucky University, Bowling Green, Kentucky, 42101, USA
| | - B Alcock
- School of Physics and Astronomy, University of Glasgow, Glasgow, G12 8QQ, UK
| | - N L S Jeffrey
- School of Physics and Astronomy, University of Glasgow, Glasgow, G12 8QQ, UK
| | - V N Melnik
- Institute of Radio Astronomy, National Academy of Sciences of Ukraine, Kharkiv, 61002, Ukraine
| | - N H Bian
- School of Physics and Astronomy, University of Glasgow, Glasgow, G12 8QQ, UK
| | - P Subramanian
- Indian Institute of Science Education and Research, Pune, 411008, India
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Roshaslina R, Tan MP, Gray WK, Subramanian P, Chin AV. 27PICTURE-BASED MEMORY IMPAIRMENT SCREEN FOR DEMENTIA: INFLUENCE OF ETHNICITY AND EDUCATION LEVEL AMONG THE ELDERLY IN MALAYSIA. Age Ageing 2017. [DOI: 10.1093/ageing/afx118.27] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
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Winokur PN, Subramanian P, Bullock JL, Arocas V, Becerra SP. Comparison of two neurotrophic serpins reveals a small fragment with cell survival activity. Mol Vis 2017; 23:372-384. [PMID: 28706437 PMCID: PMC5501690] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/31/2017] [Accepted: 06/30/2017] [Indexed: 10/31/2022] Open
Abstract
PURPOSE Protease nexin-1 (PN-1), a serpin encoded by the SERPINE2 gene, has serine protease inhibitory activity and neurotrophic properties in the brain. PN-1 inhibits retinal angiogenesis; however, PN-1's neurotrophic capacities in the retina have not yet been evaluated. Pigment epithelium-derived factor (PEDF) is a serpin that exhibits neurotrophic and antiangiogenic activities but lacks protease inhibitory properties. The aim of this study is to compare PN-1 and PEDF. METHODS Sequence comparisons were performed using computer bioinformatics programs. Mouse and bovine eyes, human retina tissue, and ARPE-19 cells were used to prepare RNA and protein samples. Interphotoreceptor matrix lavage was obtained from bovine eyes. Gene expression and protein levels were evaluated with reverse-transcription PCR (RT-PCR) and western blotting, respectively. Recombinant human PN-1, a version of PN-1 referred to as PN-1[R346A] lacking serine protease inhibitory activity, and PEDF proteins were used, as well as synthetic peptides designed from PEDF and PN-1 sequences. Survival activity in serum-starved, rat-derived retinal precursor (R28) cells was assessed with terminal deoxynucleotidyl transferase (TdT) dUTP nick-end labeling (TUNEL) cell death assays. Bcl2 levels were measured with RT-PCR. RESULTS PN-1 is analogous in primary and tertiary structure to PEDF. A region in PN-1 shares homology with the neurotrophic active region of PEDF, a 17-residue region within alpha helix C. The native human retina, ARPE-19 cells, and murine RPE and retina expressed the gene for PN-1 (SERPINE2 and Serpine2 mRNA). The retina, ARPE-19 cell lysates, and bovine interphotoreceptor matrix contained PN-1 protein. The addition of PN-1, PN-1[R346A], or the 17mer peptide of PN-1 to serum-starved retina cells decreased the number of TUNEL-positive nuclei relative to the untreated cells, such as PEDF. PN-1, PN-1[R346A], and PN-1-17mer treatments increased the Bcl2 transcript levels in serum-starved cells, as seen with PEDF. CONCLUSIONS PN-1 and PEDF share structural and functional features, and expression patterns in the retina. These serpins' mechanisms of action as cell survival factors are independent of serine protease inhibition. We have identified PN-1 as a novel factor for the retina that may play a neuroprotective role in vivo, and small peptides as relevant candidates for preventing retinal degeneration.
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Affiliation(s)
- Paige N. Winokur
- NIH, NEI, Section of Protein Structure and Function, Bethesda, MD
| | | | - Jeanee L. Bullock
- NIH, NEI, Section of Protein Structure and Function, Bethesda, MD,Georgetown University, Department of Biochemistry and Molecular and Cellular Biology, Washington, DC
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Manjula A, Subashini R, Punitha R, Subramanian P. Modulating effects of hesperidin on circadian pattern indices of rotenone induced redox homeostasis in clock mutant (cryb) of Drosophila melanogaster. BIOL RHYTHM RES 2017. [DOI: 10.1080/09291016.2017.1319641] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
Affiliation(s)
- A. Manjula
- Faculty of Science, Department of Biochemistry and Biotechnology, Annamalai University, Chidambaram, India
| | - R. Subashini
- Dharmapuram Gnagambigai Government Arts College for Women, Mayiladuthurai, India
| | - R. Punitha
- Faculty of Science, Department of Biochemistry and Biotechnology, Annamalai University, Chidambaram, India
| | - P. Subramanian
- Faculty of Science, Department of Biochemistry and Biotechnology, Annamalai University, Chidambaram, India
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Subramanian P, Mendez EF, Becerra SP. A Novel Inhibitor of 5-Lipoxygenase (5-LOX) Prevents Oxidative Stress-Induced Cell Death of Retinal Pigment Epithelium (RPE) Cells. Invest Ophthalmol Vis Sci 2017; 57:4581-8. [PMID: 27635633 PMCID: PMC5033602 DOI: 10.1167/iovs.15-19039] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/04/2023] Open
Abstract
PURPOSE 5-Lipoxygenase (5-LOX) oxygenates arachidonic acid to form 5-hydroperoxyeicosatetraenoic acid, which is further converted into biologically detrimental leukotrienes, such as leukotriene B4 (LTB4). The RPE and retina express the PNPLA2 gene for pigment epithelium-derived factor receptor (PEDF-R), a lipase involved in cell survival. The purpose here was to investigate the role of PEDF-R on the 5-LOX pathway in oxidative stress of RPE. METHODS Lipoxygenase activity assays were performed with soybean and potato lipoxygenase. Binding was evaluated by peptide-affinity chromatography and pull-down assays with PEDF-R-derived synthetic peptides or recombinant protein. Oxidative stress was induced in human ARPE-19 and primary pig RPE cells with indicated concentrations of H2O2/TNF-α. Reverse transcription-PCR of ALOX5 and PNPLA2 genes was performed. Cell viability and death rates were determined using respective biomarkers. Leukotriene B4 levels were measured by ELISA. RESULTS Among five peptides spanning between positions Leu159 and Met325 of human PEDF-R polypeptide, only two overlapping peptides, E5b and P1, bound and inhibited lipoxygenase activity. Human recombinant 5-LOX bound specifically to peptide P1 and to His6/Xpress-tagged PEDF-R via ionic interactions. The two inhibitor peptides E5b and P1 promoted cell viability and decreased cell death of RPE cells undergoing oxidative stress. Oxidative stress decreased the levels of PNPLA2 transcripts with no effect on ALOX5 expression. Exogenous additions of P1 peptide or overexpression of the PNPLA2 gene decreased both LTB4 levels and death of RPE cells undergoing oxidative stress. CONCLUSIONS A novel peptide region of PEDF-R inhibits 5-LOX, which intersects with RPE cell death pathways induced by oxidative stress.
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Affiliation(s)
- Preeti Subramanian
- Section of Protein Structure and Function-Laboratory of Retinal Cell and Molecular Biology National Eye Institute, National Institutes of Health, Bethesda, Maryland, United States
| | - Emily F Mendez
- Section of Protein Structure and Function-Laboratory of Retinal Cell and Molecular Biology National Eye Institute, National Institutes of Health, Bethesda, Maryland, United States
| | - S Patricia Becerra
- Section of Protein Structure and Function-Laboratory of Retinal Cell and Molecular Biology National Eye Institute, National Institutes of Health, Bethesda, Maryland, United States
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Connelly S, Bristol JA, Hubert S, Subramanian P, Hasan NA, Colwell RR, Kaleko M. SYN-004 (ribaxamase), an oral beta-lactamase, mitigates antibiotic-mediated dysbiosis in a porcine gut microbiome model. J Appl Microbiol 2017; 123:66-79. [PMID: 28245091 DOI: 10.1111/jam.13432] [Citation(s) in RCA: 24] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/05/2016] [Revised: 02/15/2017] [Accepted: 02/21/2017] [Indexed: 12/13/2022]
Abstract
AIM To evaluate an antibiotic inactivation strategy to protect the gut microbiome from antibiotic-mediated damage. METHODS AND RESULTS SYN-004 (ribaxamase) is an orally delivered beta-lactamase intended to degrade penicillins and cephalosporins within the gastrointestinal tract to protect the microbiome. Pigs (20 kg, n = 10) were treated with ceftriaxone (CRO) (IV, 50 mg kg-1 , SID) for 7 days and a cohort (n = 5) received ribaxamase (PO, 75 mg, QID) for 9 days beginning the day before antibiotic administration. Ceftriaxone serum levels were not statistically different in the antibiotic-alone and antibiotic + ribaxamase groups, indicating ribaxamase did not alter systemic antibiotic levels. Whole-genome metagenomic analyses of pig faecal DNA revealed that CRO caused significant changes to the gut microbiome and an increased frequency of antibiotic resistance genes. With ribaxamase, the gut microbiomes were not significantly different from pretreatment and antibiotic resistance gene frequency was not increased. CONCLUSION Ribaxamase mitigated CRO-mediated gut microbiome dysbiosis and attenuated propagation of the antibiotic resistance genes in pigs. SIGNIFICANCE AND IMPACT OF THE STUDY Damage of the microbiome can lead to overgrowth of pathogenic organisms and antibiotic exposure can promote selection for antibiotic-resistant micro-organisms. Ribaxamase has the potential to become the first therapy designed to protect the gut microbiome from antibiotic-mediated dysbiosis and reduce emergence of antibiotic resistance.
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Affiliation(s)
- S Connelly
- Synthetic Biologics Inc., Rockville, MD, USA
| | - J A Bristol
- Synthetic Biologics Inc., Rockville, MD, USA
| | - S Hubert
- Synthetic Biologics Inc., Rockville, MD, USA
| | | | - N A Hasan
- CosmosID Inc., Rockville, MD, USA.,University of Maryland Institute of Advanced Computer Studies, University of Maryland, College Park, MD, USA
| | - R R Colwell
- CosmosID Inc., Rockville, MD, USA.,University of Maryland Institute of Advanced Computer Studies, University of Maryland, College Park, MD, USA
| | - M Kaleko
- Synthetic Biologics Inc., Rockville, MD, USA
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Juliet sheela K, Radha Krishnan S, Shanmugam V, Subramanian P. EPR and optical studies of VO2+ doped potassium succinate-succinic acid single crystal – Substitutional incorporation. J Mol Struct 2017. [DOI: 10.1016/j.molstruc.2016.11.005] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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Khan OH, Malviya A, Subramanian P, Agolley D, Witt JD. Minimally invasive periacetabular osteotomy using a modified Smith-Petersen approach: technique and early outcomes. Bone Joint J 2017; 99-B:22-28. [PMID: 28053253 DOI: 10.1302/0301-620x.99b1.bjj-2016-0439.r1] [Citation(s) in RCA: 36] [Impact Index Per Article: 5.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 05/15/2016] [Accepted: 09/02/2016] [Indexed: 02/06/2023]
Abstract
AIMS Periacetabular osteotomy is an effective way of treating symptomatic hip dysplasia. We describe a new minimally invasive technique using a modification of the Smith-Peterson approach. We performed a prospective, longitudinal cohort study to assess for any compromise in acetabular correction when using this approach, and to see if the procedure would have a higher complication rate than that quoted in the literature for other approaches. We also assessed for any improvement in functional outcome. PATIENTS AND METHODS From 168 consecutive patients (189 hips) who underwent acetabular correction between March 2010 and March 2013 we excluded those who had undergone previous pelvic surgery for DDH and those being treated for acetabular retroversion. The remaining 151 patients (15 men, 136 women) (166 hips) had a mean age of 32 years (15 to 56) and the mean duration of follow-up was 2.8 years (1.2 to 4.5). In all 90% of cases were Tönnis grade 0 or 1. Functional outcomes were assessed using the Non Arthritic Hip Score (NAHS), University of California, Los Angeles (UCLA) and Tegner activity scores. RESULTS The mean pre-operative lateral centre-edge angle was 14.2° (-5° to 30°) and the mean acetabular index was 18.4° (4° to 40°). Post-operatively these were 31° (18° to 46°) and 3° (-7° to 29°), respectively, a significant improvement in both (p < 0.001). Allogenic blood transfusion was required in two patients (1.2%). There were no major nerve or vascular complications, and no wound infections. At the time of last follow-up, we noted a significant improvement in functional outcome scores: UCLA improved by 2.31 points, Tegner improved by 1.08 points, and the NAHS improved by 25.4 points (p < 0.001 for each). Hypermobility and longer duration of surgery were significant negative predictors for a good post-operative UCLA score, while residual retroversion was a positive predictor of post-operative UCLA score. CONCLUSION We have found this approach to be safe and effective, facilitating early recovery from surgery. Cite this article: Bone Joint J 2017;99-B:22-8.
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Affiliation(s)
- O H Khan
- University College London Hospitals NHS Foundation Trust, 235 Euston Rd, Fitzrovia, London NW1 2BU, UK
| | - A Malviya
- Northumbria Healthcare NHS Foundation Trust, Woodhorn Lane, Ashington NE63 9JJ, UK
| | - P Subramanian
- University College London Hospitals NHS Foundation Trust, 235 Euston Rd, Fitzrovia, London NW1 2BU, UK
| | - D Agolley
- John Flynn Private Hospital, 42 Inland Drive, Tugun, Queensland, Australia
| | - J D Witt
- University College London Hospitals NHS Foundation Trust, 235 Euston Rd, Fitzrovia, London NW1 2BU, UK
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Jaafar MH, Mahadeva S, Subramanian P, Tan MP. Perceptions of Healthcare Professionals on the Usage of Percutaneous Endoscopic Gastrostomy in a Teaching Hospital from a Middle-Income South East Asian Country. J Nutr Health Aging 2017; 21:473-479. [PMID: 28346575 DOI: 10.1007/s12603-016-0774-2] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
Abstract
OBJECTIVE To explore the perceptions of healthcare professionals' (HCPs) in a South East Asian nation towards percutaneous endoscopic gastrostomy (PEG) feeding. DESIGN Semi-structured, qualitative interviews. SETTINGS A teaching hospital in Kuala Lumpur, Malaysia. PARTICIPANTS A total of 17 healthcare professionals aged 23-43 years, 82% women. RESULTS Thematic analysis revealed five themes that represent HCPs' perceptions in relation to the usage of PEG feeding: 1) knowledge of HCPs, 2) communication, 3) understanding among patients, and 4) financial and affordability. CONCLUSION The rationale for reluctance towards PEG feeding observed in this regions was explained by lack of education, knowledge, communication, team work, and financial support. Future studies should assess the effects of educational programmes among HCPs and changes in policies to promote affordability on the utilization of PEG feeding in this region.
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Affiliation(s)
- M H Jaafar
- Maw Pin Tan, MBBS, Department of Medicine, Faculty of Medicine, University of Malaya, 50603, Kuala Lumpur, Malaysia, Telephone: +6016-3328600 / +603-79493200, Email :
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Mohanty PK, Arunbabu KP, Aziz T, Dugad SR, Gupta SK, Hariharan B, Jagadeesan P, Jain A, Morris SD, Rao BS, Hayashi Y, Kawakami S, Oshima A, Shibata S, Raha S, Subramanian P, Kojima H. Transient Weakening of Earth's Magnetic Shield Probed by a Cosmic Ray Burst. Phys Rev Lett 2016; 117:171101. [PMID: 27824449 DOI: 10.1103/physrevlett.117.171101] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/16/2016] [Indexed: 06/06/2023]
Abstract
The GRAPES-3 tracking muon telescope in Ooty, India measures muon intensity at high cutoff rigidities (15-24 GV) along nine independent directions covering 2.3 sr. The arrival of a coronal mass ejection on 22 June 2015 18:40 UT had triggered a severe G4-class geomagnetic storm (storm). Starting 19:00 UT, the GRAPES-3 muon telescope recorded a 2 h high-energy (∼20 GeV) burst of galactic cosmic rays (GCRs) that was strongly correlated with a 40 nT surge in the interplanetary magnetic field (IMF). Simulations have shown that a large (17×) compression of the IMF to 680 nT, followed by reconnection with the geomagnetic field (GMF) leading to lower cutoff rigidities could generate this burst. Here, 680 nT represents a short-term change in GMF around Earth, averaged over 7 times its volume. The GCRs, due to lowering of cutoff rigidities, were deflected from Earth's day side by ∼210° in longitude, offering a natural explanation of its night-time detection by the GRAPES-3. The simultaneous occurrence of the burst in all nine directions suggests its origin close to Earth. It also indicates a transient weakening of Earth's magnetic shield, and may hold clues for a better understanding of future superstorms that could cripple modern technological infrastructure on Earth, and endanger the lives of the astronauts in space.
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Affiliation(s)
- P K Mohanty
- Tata Institute of Fundamental Research, Homi Bhabha Road, Mumbai 400005, India†
| | - K P Arunbabu
- Tata Institute of Fundamental Research, Homi Bhabha Road, Mumbai 400005, India†
| | - T Aziz
- Tata Institute of Fundamental Research, Homi Bhabha Road, Mumbai 400005, India†
| | - S R Dugad
- Tata Institute of Fundamental Research, Homi Bhabha Road, Mumbai 400005, India†
| | - S K Gupta
- Tata Institute of Fundamental Research, Homi Bhabha Road, Mumbai 400005, India†
| | - B Hariharan
- Tata Institute of Fundamental Research, Homi Bhabha Road, Mumbai 400005, India†
| | - P Jagadeesan
- Tata Institute of Fundamental Research, Homi Bhabha Road, Mumbai 400005, India†
| | - A Jain
- Tata Institute of Fundamental Research, Homi Bhabha Road, Mumbai 400005, India†
| | - S D Morris
- Tata Institute of Fundamental Research, Homi Bhabha Road, Mumbai 400005, India†
| | - B S Rao
- Tata Institute of Fundamental Research, Homi Bhabha Road, Mumbai 400005, India†
| | - Y Hayashi
- Graduate School of Science, Osaka City University, 558-8585 Osaka, Japan†
| | - S Kawakami
- Graduate School of Science, Osaka City University, 558-8585 Osaka, Japan†
| | - A Oshima
- College of Engineering, Chubu University, Kasugai, Aichi 487-8501, Japan†
| | - S Shibata
- College of Engineering, Chubu University, Kasugai, Aichi 487-8501, Japan†
| | - S Raha
- Bose Institute, 93/1, A.P.C. Road, Kolkata 700009, India†
| | - P Subramanian
- Indian Institute of Science Education and Research, Pune 411021, India†
| | - H Kojima
- Faculty of Engineering, Aichi Institute of Technology, Toyota City, Aichi 470-0392, Japan†
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Vapiwala N, Narayan V, Subramanian P, Christodouleas J, Bekelman J, Mick R, Rajendran R, Haas N. Phase I Trial of Everolimus in Combination with Salvage Radiation Therapy (RT) for Post-prostatectomy Biochemical Recurrence (BCR) in Prostate Cancer (PC) Patients. Int J Radiat Oncol Biol Phys 2016. [DOI: 10.1016/j.ijrobp.2016.06.464] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
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Angaali N, Roy ND, Chitgupikar SR, Subramanian P, Pabbati JL. Ventilator Associated Pneumonia in an Infant Caused by Stenotrophomonas maltophila - A Case Report. J Clin Diagn Res 2016; 10:DD01-DD03. [PMID: 27790437 PMCID: PMC5071937 DOI: 10.7860/jcdr/2016/19822.8411] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/27/2016] [Accepted: 07/02/2016] [Indexed: 11/24/2022]
Abstract
Stenotrophomonas maltophila (S.maltophila) is an aerobic Gram-negative bacillus that is a frequent colonizer of fluids used in the hospital setting. The organism is known to cause life threatening infections in immuno-compromised patients especially in those who are neutropenic, on chemotherapy or on broad spectrum antibiotics. We report a case of ventilator associated pneumonia caused by Stenotrophomonas maltophila in a two-month old infant who later developed multi organ dysfunction syndrome. In seriously ill paediatric patients, S.maltophila should also be considered as a possible pathogen for Ventilator-Associated Pneumonia (VAP), hence empiric antibiotic choice should include antimicrobials that are active against S. maltophila. An early identification and treatment of VAP with Multi-Drug Resistant (MDR) strains with appropriate antibiotics has a significant impact on morbidity and mortality.
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Affiliation(s)
- Neelima Angaali
- Associate Professor, Department of Microbiology, MediCiti Institute of Medical Sciences (MIMS), Hyderabad, Telangana, India
| | - Nina Dutta Roy
- Head of Department, Department of Microbiology, Pathcare Labs, Hyderabad, Telangana, India
| | | | - Preeti Subramanian
- Assistant Professor, Department of Pediatrics, MIMS, Hyderabad, Telangana, India
| | - Jaya Lakshmi Pabbati
- Assistant Professor, Department of Pediatrics, MIMS, Hyderabad, Telangana, India
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Subramanian P, Archer AJ, Knobloch E, Rucklidge AM. Three-Dimensional Icosahedral Phase Field Quasicrystal. Phys Rev Lett 2016; 117:075501. [PMID: 27563973 DOI: 10.1103/physrevlett.117.075501] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/19/2016] [Indexed: 06/06/2023]
Abstract
We investigate the formation and stability of icosahedral quasicrystalline structures using a dynamic phase field crystal model. Nonlinear interactions between density waves at two length scales stabilize three-dimensional quasicrystals. We determine the phase diagram and parameter values required for the quasicrystal to be the global minimum free energy state. We demonstrate that traits that promote the formation of two-dimensional quasicrystals are extant in three dimensions, and highlight the characteristics required for three-dimensional soft matter quasicrystal formation.
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Affiliation(s)
- P Subramanian
- Department of Applied Mathematics, University of Leeds, Leeds LS2 9JT, United Kingdom
| | - A J Archer
- Department of Mathematical Sciences, Loughborough University, Loughborough LE11 3TU, United Kingdom
| | - E Knobloch
- Department of Physics, University of California at Berkeley, Berkeley, California 94720, USA
| | - A M Rucklidge
- Department of Applied Mathematics, University of Leeds, Leeds LS2 9JT, United Kingdom
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Bhavani P, Subramanian P, Shanmugapriya S. Modulating effects of vanillic acid on circadian pattern of indices of redox homeostasis in N-Methly-N′-Nitro-N-Nitrosoguanidine induced endometrial carcinoma in rats. BIOL RHYTHM RES 2016. [DOI: 10.1080/09291016.2016.1173362] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
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Mythili R, Subramanian P, Venkatachalam P. Art of Waste to Fortune: Conversion of Redgram Stalk into Value Added Chemicals Through Fast Pyrolysis. Natl Acad Sci Lett 2016. [DOI: 10.1007/s40009-016-0440-6] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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Shanmugapriya S, Bhavani P, Subramanian P. Effect of geraniol on temporal patterns of clock gene products during endometrial carcinogenesis in rats. BIOL RHYTHM RES 2016. [DOI: 10.1080/09291016.2016.1144500] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
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Kenealey J, Subramanian P, Comitato A, Bullock J, Keehan L, Polato F, Hoover D, Marigo V, Becerra SP. Small Retinoprotective Peptides Reveal a Receptor-binding Region on Pigment Epithelium-derived Factor. J Biol Chem 2015; 290:25241-53. [PMID: 26304116 DOI: 10.1074/jbc.m115.645846] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/13/2015] [Indexed: 11/06/2022] Open
Abstract
The cytoprotective effects of pigment epithelium-derived factor (PEDF) require interactions between an as of a yet undefined region with a distinct ectodomain on the PEDF receptor (PEDF-R). Here we characterized the area in PEDF that interacts with PEDF-R to promote photoreceptor survival. Molecular docking studies suggested that the ligand binding site of PEDF-R interacts with the neurotrophic region of PEDF (44-mer, positions 78-121). Binding assays demonstrated that PEDF-R bound the 44-mer peptide. Moreover, peptide P1 from the PEDF-R ectodomain had affinity for the 44-mer and a shorter fragment within it, 17-mer (positions 98-114). Single residue substitutions to alanine along the 17-mer sequence were designed and tested for binding and biological activity. Altered 17-mer[R99A] did not bind to the P1 peptide, whereas 17-mer[H105A] had higher affinity than the unmodified 17-mer. Peptides 17-mer, 17-mer[H105A], and 44-mer exhibited cytoprotective effects in cultured retina R28 cells. Intravitreal injections of these peptides and PEDF in the rd1 mouse model of retinal degeneration decreased the numbers of dying photoreceptors, 17-mer[H105A] being most effective. The blocking peptide P1 hindered their protective effects both in retina cells and in vivo. Thus, in addition to demonstrating that the region composed of positions 98-114 of PEDF contains critical residues for PEDF-R interaction that mediates survival effects, the findings reveal distinct small PEDF fragments with neurotrophic effects on photoreceptors.
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Affiliation(s)
| | | | - Antonella Comitato
- the Department of Life Sciences, University of Modena and Reggio Emilia, 41125 Modena, Italy, and
| | - Jeanee Bullock
- From the National Eye Institute and the Department of Biochemistry and Molecular and Cellular Biology, Georgetown University, Washington, D. C. 20057
| | | | | | - David Hoover
- the Center for Information Technology, National Institutes of Health, Bethesda, Maryland 20892
| | - Valeria Marigo
- the Department of Life Sciences, University of Modena and Reggio Emilia, 41125 Modena, Italy, and
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Seenipandi A, Subramanian P. Protective effect of atorvastatin on circadian regulation of liver marker enzymes and redox status in hyperlipidemic rats. BIOL RHYTHM RES 2015. [DOI: 10.1080/09291016.2015.1056435] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
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Ramachandram K, Vellayan R, Subramanian P, Fauzi AA, Goh HT. Social participation among individuals with physical disabilities: validation of Malay assessment of life habits (3.1). Physiotherapy 2015. [DOI: 10.1016/j.physio.2015.03.3245] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
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Subramanian P, Mendez E, Becerra SP. Identification of A Novel Inhibitor of 5‐Lipoxygenase. FASEB J 2015. [DOI: 10.1096/fasebj.29.1_supplement.lb107] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Affiliation(s)
| | - Emily Mendez
- National Eye Institute NIHBethesdaMDUnited States
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49
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Sarangapani R, Ramavat V, Reddy S, Subramanian P, Sikder A. Rheology studies of NTO–TNT based melt-cast dispersions and influence of particle–dispersant interactions. POWDER TECHNOL 2015. [DOI: 10.1016/j.powtec.2014.12.013] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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50
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Divani K, Subramanian P, Goldie B. Avoiding extensor tendon rupture after the use of palmar locking plates for distal radial fractures. J Hand Surg Eur Vol 2015; 40:215-6. [PMID: 24194612 DOI: 10.1177/1753193413511575] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 02/03/2023]
Affiliation(s)
- K Divani
- Whipps Cross University Hospital, Leytonstone, London UK
| | - P Subramanian
- Whipps Cross University Hospital, Leytonstone, London UK
| | - B Goldie
- Whipps Cross University Hospital, Leytonstone, London UK
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