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Cai Z, Dai Y, Jin X, Xu H, Huang Z, Xie Z, Yu X, Luo J. Ambient temperature regulates root circumnutation in rice through the ethylene pathway: transcriptome analysis reveals key genes involved. Front Plant Sci 2024; 15:1348295. [PMID: 38525142 PMCID: PMC10957643 DOI: 10.3389/fpls.2024.1348295] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 12/02/2023] [Accepted: 02/20/2024] [Indexed: 03/26/2024]
Abstract
Plant roots are constantly prepared to adjust their growth trajectories to avoid unfavorable environments, and their ability to reorient is particularly crucial for survival. Under laboratory conditions, this continuous reorientation of the root tip is manifested as coiling or waving, which we refer to as root circumnutation. However, the effect of ambient temperature (AT) on root circumnutation remains unexplored. In this study, rice seedlings were employed to assess the impact of varying ATs on root circumnutation. The role of ethylene in mediating root circumnutation under elevated AT was examined using the ethylene biosynthesis inhibitor aminooxyacetic acid (AOA) and the ethylene perception antagonist silver thiosulfate (STS). Furthermore, transcriptome sequencing, weighted gene co-expression network analysis, and real-time quantitative PCR were utilized to analyze gene expressions in rice root tips under four distinct treatments: 25°C, 35°C, 35°C+STS, and 35°C+AOA. As a result, genes associated with ethylene synthesis and signaling (OsACOs and OsERFs), auxin synthesis and transport (OsYUCCA6, OsABCB15, and OsNPFs), cell elongation (OsEXPAs, OsXTHs, OsEGL1, and OsEXORDIUMs), as well as the inhibition of root curling (OsRMC) were identified. Notably, the expression levels of these genes increased with rising temperatures above 25°C. This study is the first to demonstrate that elevated AT can induce root circumnutation in rice via the ethylene pathway and proposes a potential molecular model through the identification of key genes. These findings offer valuable insights into the growth regulation mechanism of plant roots under elevated AT conditions.
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Affiliation(s)
- Zeping Cai
- School of Tropical Agriculture and Forestry, Hainan University, Hainan, China
| | - Yinuo Dai
- School of Tropical Agriculture and Forestry, Hainan University, Hainan, China
| | - Xia Jin
- School of Tropical Agriculture and Forestry, Hainan University, Hainan, China
| | - Hui Xu
- School of Tropical Agriculture and Forestry, Hainan University, Hainan, China
| | - Zhen Huang
- School of Tropical Agriculture and Forestry, Hainan University, Hainan, China
| | - Zhenyu Xie
- School of Tropical Agriculture and Forestry, Hainan University, Hainan, China
| | - Xudong Yu
- School of Tropical Agriculture and Forestry, Hainan University, Hainan, China
| | - Jiajia Luo
- School of Tropical Agriculture and Forestry, Hainan University, Hainan, China
- Tropical Crops Genetic Resources Institute, Chinese Academy of Tropical Agricultural Sciences, Haikou, Hainan, China
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2
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Zhu F, Wang G, Zhao C, Malhotra S, Zhao M, He Z, Shi J, Jiang Z, Zhou W. Automatic reorientation by deep learning to generate short-axis SPECT myocardial perfusion images. J Nucl Cardiol 2023; 30:1825-1835. [PMID: 36859594 DOI: 10.1007/s12350-023-03226-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/25/2022] [Accepted: 01/30/2023] [Indexed: 03/03/2023]
Abstract
BACKGROUND Single photon emission computed tomography (SPECT) myocardial perfusion images (MPI) can be displayed both in traditional short-axis (SA) cardiac planes and polar maps for interpretation and quantification. It is essential to reorient the reconstructed transaxial SPECT MPI into standard SA slices. This study is aimed to develop a deep-learning-based approach for automatic reorientation of MPI. METHODS A total of 254 patients were enrolled, including 226 stress SPECT MPIs and 247 rest SPECT MPIs. Fivefold cross-validation with 180 stress and 201 rest MPIs was used for training and internal validation; the remaining images were used for testing. The rigid transformation parameters (translation and rotation) from manual reorientation were annotated by an experienced nuclear cardiologist and used as the reference standard. A convolutional neural network (CNN) was designed to predict the transformation parameters. Then, the derived transform was applied to the grid generator and sampler in spatial transformer network (STN) to generate the reoriented image. A loss function containing mean absolute errors for translation and mean square errors for rotation was employed. A three-stage optimization strategy was adopted for model optimization: (1) optimize the translation parameters while fixing the rotation parameters; (2) optimize rotation parameters while fixing the translation parameters; (3) optimize both translation and rotation parameters together. RESULTS In the test set, the Spearman determination coefficients of the translation distances and rotation angles between the model prediction and the reference standard were 0.993 in X axis, 0.992 in Y axis, 0.994 in Z axis, 0.987 along X axis, 0.990 along Y axis and 0.996 along Z axis, respectively. For the 46 stress MPIs in the test set, the Spearman determination coefficients were 0.858 in percentage of profusion defect (PPD) and 0.858 in summed stress score (SSS); for the 46 rest MPIs in the test set, the Spearman determination coefficients were 0.9 in PPD and 0.9 in summed rest score (SRS). CONCLUSIONS Our deep learning-based LV reorientation method is able to accurately generate the SA images. Technical validations and subsequent evaluations of measured clinical parameters show that it has great promise for clinical use.
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Affiliation(s)
- Fubao Zhu
- School of Computer and Communication Engineering, Zhengzhou University of Light Industry, Zhengzhou, 450000, Henan, China
| | - Guojie Wang
- School of Computer and Communication Engineering, Zhengzhou University of Light Industry, Zhengzhou, 450000, Henan, China
| | - Chen Zhao
- Department of Applied Computing, Michigan Technological University, Houghton, MI, 49931, USA
| | - Saurabh Malhotra
- Division of Cardiology, Cook County Health and Hospitals System, Chicago, IL, 60612, USA
- Division of Cardiology, Rush Medical College, Chicago, IL, 60612, USA
| | - Min Zhao
- Department of Nuclear Medicine, Xiangya Hospital, Central South University, Changsha, 410008, China
| | - Zhuo He
- Department of Applied Computing, Michigan Technological University, Houghton, MI, 49931, USA
| | - Jianzhou Shi
- Department of Cardiology, The First Affiliated Hospital of Nanjing Medical University, Guangzhou Road 300, Nanjing, 210029, Jiangsu, China
| | - Zhixin Jiang
- Department of Cardiology, The First Affiliated Hospital of Nanjing Medical University, Guangzhou Road 300, Nanjing, 210029, Jiangsu, China.
| | - Weihua Zhou
- Department of Applied Computing, Michigan Technological University, Houghton, MI, 49931, USA.
- Center for Biocomputing and Digital Health, Institute of Computing and Cybersystems, and Health Research Institute, Michigan Technological University, 1400 Townsend Drive, Houghton, MI, 49931, USA.
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Percival N, Feeney L, Laycock A, Bailie R. Supporting reorientation of health services in Indigenous Australian communities: the health promotion systems assessment tool. Health Promot Int 2023; 38:7118415. [PMID: 37057391 DOI: 10.1093/heapro/daad021] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/15/2023] Open
Abstract
Few tools and mechanisms exist to assist the reorientation of health services, especially in the Indigenous Australian health context; where improving health status and life expectancy is a priority. We developed a health promotion systems assessment tool (HPSAT) to provide health services with the information and support they need to drive health system change. Tool development occurred using a participatory, iterative approach that included a literature review, expert input by Indigenous and non-Indigenous stakeholders and annual group workshops in four Indigenous Australian primary health care (PHC) services. Four health system components: (i) organizational environment; (ii) service delivery systems; (iii) information systems and decision support; and (iv) adaptability and integration, form the framework of the tool. A scoring system monitors system change over time. The HPSAT provides a constructive framework to support health services to collectively assess and support reorientation in Indigenous Australian PHC services. Participation of key stakeholders with an intimate knowledge about the local context was pivotal in developing a user-friendly and fit-for-purpose tool. Maximum benefits of the tool are likely to be gained when used as part of a continuous quality improvement intervention.
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Affiliation(s)
- Nikki Percival
- School of Public Health, Faculty of Health, University of Technology Sydney, PO Box 123, Broadway, NSW 2007Australia
| | - Lynette Feeney
- The Centre for Rural Health, University of Sydney, Sydney, Australia
| | - Alison Laycock
- The Centre for Rural Health, University of Sydney, Sydney, Australia
| | - Ross Bailie
- The Centre for Rural Health, University of Sydney, Sydney, Australia
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4
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Gagliardi CM, Normandin ME, Keinath AT, Julian JB, Lopez MR, Ramos-Alvarez MM, Epstein RA, Muzzio IA. Distinct neural mechanisms for heading retrieval and context recognition in the hippocampus during spatial reorientation. Res Sq 2023:rs.3.rs-2724785. [PMID: 37034652 PMCID: PMC10081367 DOI: 10.21203/rs.3.rs-2724785/v1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/03/2023]
Abstract
Reorientation, the process of regaining one's bearings after becoming lost, requires identification of a spatial context (context recognition) and recovery of heading direction within that context (heading retrieval). We previously showed that these processes rely on the use of features and geometry, respectively. Here, we examine reorientation behavior in a task that creates contextual ambiguity over a long timescale to demonstrate that mice learn to combine both featural and geometric cues to recover heading with experience. At the neural level, most CA1 neurons persistently align to geometry, and this alignment predicts heading behavior. However, a small subset of cells shows feature-sensitive place field remapping, which serves to predict context. Efficient heading retrieval and context recognition require integration of featural and geometric information in the active network through rate changes. These data illustrate how context recognition and heading retrieval are coded in CA1 and how these processes change with experience.
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Affiliation(s)
- Celia M Gagliardi
- Department of Neuroscience, Development, and Regenerative Biology, University of Texas at San Antonio, 1 UTSA Circle, San Antonio, TX 78249, USA
- Department of Psychological & Brain Sciences, University of Iowa, Iowa City, IA 52245, USA
| | - Marc E Normandin
- Department of Psychological & Brain Sciences, University of Iowa, Iowa City, IA 52245, USA
| | - Alexandra T Keinath
- Department of Psychiatry, Douglas Hospital Research Centre, McGill University, 6875 Boulevard LaSalle, Verdun, QC, H4H 1RS, Canada
| | - Joshua B Julian
- Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA
| | - Matthew R Lopez
- Department of Neuroscience, Development, and Regenerative Biology, University of Texas at San Antonio, 1 UTSA Circle, San Antonio, TX 78249, USA
- Department of Psychological & Brain Sciences, University of Iowa, Iowa City, IA 52245, USA
| | | | - Russell A Epstein
- Department of Psychology, University of Pennsylvania, Philadelphia, PA 19104, USA
| | - Isabel A Muzzio
- Department of Neuroscience, Development, and Regenerative Biology, University of Texas at San Antonio, 1 UTSA Circle, San Antonio, TX 78249, USA
- Department of Psychiatry, Douglas Hospital Research Centre, McGill University, 6875 Boulevard LaSalle, Verdun, QC, H4H 1RS, Canada
- Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA
- Psychology Department, University of Jaen, Campus Las Lagunillas, Jaen 23071, Spain
- Department of Psychology, University of Pennsylvania, Philadelphia, PA 19104, USA
- Department of Psychological & Brain Sciences, University of Iowa, Iowa City, IA 52245, USA
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5
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Jia YJ, Han WZ. Mechanisms of Hydride Nucleation, Growth, Reorientation, and Embrittlement in Zirconium: A Review. Materials (Basel) 2023; 16:2419. [PMID: 36984297 PMCID: PMC10059671 DOI: 10.3390/ma16062419] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 02/23/2023] [Revised: 03/16/2023] [Accepted: 03/16/2023] [Indexed: 06/18/2023]
Abstract
Zirconium (Zr) hydrides threaten the reliability of fuel assembly and have repeatedly induced failures in cladding tubes and pressure vessels. Thus, they attract a broad range of research interests. For example, delayed hydride cracking induced a severe fracture and failure in a Zircaloy-2 pressure tube in 1983, causing the emergency shutdown of the Pickering nuclear reactor. Hydride has high hardness and very low toughness, and it tends to aggregate toward cooler or tensile regions, which initiates localized hydride precipitation and results in delayed hydride cracking. Notably, hydride reorientation under tensile stress substantially decreases the fracture toughness and increases the ductile-to-brittle transition temperature of Zr alloys, which reduces the safety of the long-term storage of spent nuclear fuel. Therefore, improving our knowledge of Zr hydrides is useful for effectively controlling hydride embrittlement in fuel assembly. The aim of this review is to reorganize the mechanisms of hydride nucleation and growth behaviors, hydride reorientation under external stress, and hydride-induced embrittlement. We revisit important examples of progress of research in this field and emphasize the key future aspects of research on Zr hydrides.
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6
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Baratti G, Sovrano VA. Two Are Better Than One: Integrating Spatial Geometry with a Conspicuous Landmark in Zebrafish Reorientation Behavior. Animals (Basel) 2023; 13:ani13030537. [PMID: 36766426 PMCID: PMC9913199 DOI: 10.3390/ani13030537] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/31/2022] [Revised: 01/30/2023] [Accepted: 02/01/2023] [Indexed: 02/05/2023] Open
Abstract
Within bounded environments of a distinctive shape, zebrafish locate two geometrically equivalent corner positions, based on surface metrics and left-right directions. For instance, the corners with a short surface right/long surface left cannot be distinguished as unique spatial locations unless other cues break the symmetry. By conjoining geometry with a conspicuous landmark, such as a different-color surface, one of the two geometric twins will have a short different-colored surface right, becoming identifiable. Zebrafish spontaneously combine a rectangular white arena's shape with a blue wall landmark, but only when this landmark is near the target corner; when far, that cue triggers a steady attractiveness bias. In this study, we trained zebrafish to use a blue wall landmark in conjunction with a rectangular-shaped arena, providing them rewards over time. We found that trained zebrafish learned to locate the target corner, regardless of the landmark's length and distance, overcoming the attractiveness bias. Zebrafish preferred geometry after removing the landmark (geometric test), but not if put into conflict geometry and landmark (affine transformation). Analysis on movement patterns revealed wall-following exploration as a consistent strategy for approaching the target corner, with individual left-right direction. The capacity of zebrafish to handle different sources of information may be grounds for investigating how environmental changes affect fish spatial behavior in threatened ecosystems.
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Affiliation(s)
- Greta Baratti
- CIMeC, Center for Mind/Brain Sciences, University of Trento, 38068 Rovereto, Italy
- Correspondence: (G.B.); (V.A.S.); Tel.: +39-0464-808703 (V.A.S.)
| | - Valeria Anna Sovrano
- CIMeC, Center for Mind/Brain Sciences, University of Trento, 38068 Rovereto, Italy
- Department of Psychology and Cognitive Science, University of Trento, 38068 Rovereto, Italy
- Correspondence: (G.B.); (V.A.S.); Tel.: +39-0464-808703 (V.A.S.)
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7
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Baratti G, Boffelli S, Potrich D, Sovrano VA. Spatial Learning by Using Non-Visual Geometry and a Visual 3D Landmark in Zebrafish (Danio rerio). Animals (Basel) 2023; 13. [PMID: 36766329 DOI: 10.3390/ani13030440] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/14/2022] [Revised: 01/21/2023] [Accepted: 01/23/2023] [Indexed: 02/02/2023] Open
Abstract
Fish conjoin environmental geometry with conspicuous landmarks to reorient towards foraging sites and social stimuli. Zebrafish (Danio rerio) can merge a rectangular opaque arena with a 2D landmark (a blue-colored wall) but cannot merge a rectangular transparent arena with a 3D landmark (a blue cylinder) without training to "feel" the environment thanks to other-than-sight pathways. Thus, their success is linked to tasks differences (spontaneous vs. rewarded). This study explored the reorientation behavior of zebrafish within a rectangular transparent arena, with a blue cylinder outside, proximal to/distal from a target corner position, on the short/long side of the arena. Adult males were extensively trained to distinguish the correct corner from the rotational one, sharing an equivalent metric-sense relationship (short surface left, long surface right), to access food and companions. Results showed that zebrafish's reorientation behavior was driven by both the non-visual geometry and the visual landmark, partially depending on the landmark's proximity and surface length. Better accuracy was attained when the landmark was proximal to the target corner. When long-term experience was allowed, zebrafish handled non-visual and visual sensory stimulations over time for reorienting. We advance the possibility that multisensory processes affect fish's reorientation behavior and spatial learning, providing a link through which to investigate animals' exploratory strategies to face situations of visual deprivation or impairments.
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8
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Normandin ME, Garza MC, Ramos-Alvarez MM, Julian JB, Eresanara T, Punjaala N, Vasquez JH, Lopez MR, Muzzio IA. Navigable Space and Traversable Edges Differentially Influence Reorientation in Sighted and Blind Mice. Psychol Sci 2022; 33:925-947. [PMID: 35536866 PMCID: PMC9343889 DOI: 10.1177/09567976211055373] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022] Open
Abstract
Reorientation enables navigators to regain their bearings after becoming lost. Disoriented individuals primarily reorient themselves using the geometry of a layout, even when other informative cues, such as landmarks, are present. Yet the specific strategies that animals use to determine geometry are unclear. Moreover, because vision allows subjects to rapidly form precise representations of objects and background, it is unknown whether it has a deterministic role in the use of geometry. In this study, we tested sighted and congenitally blind mice (Ns = 8-11) in various settings in which global shape parameters were manipulated. Results indicated that the navigational affordances of the context-the traversable space-promote sampling of boundaries, which determines the effective use of geometric strategies in both sighted and blind mice. However, blind animals can also effectively reorient themselves using 3D edges by extensively patrolling the borders, even when the traversable space is not limited by these boundaries.
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Affiliation(s)
| | - Maria C Garza
- Department of Biology, The University of Texas at San Antonio
| | | | | | - Tuoyo Eresanara
- Department of Biology, The University of Texas at San Antonio
| | | | - Juan H Vasquez
- Department of Biology, The University of Texas at San Antonio
| | - Matthew R Lopez
- Department of Biology, The University of Texas at San Antonio
| | - Isabel A Muzzio
- Department of Biology, The University of Texas at San Antonio
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Luo C, Chung C, Yakacki CM, Long K, Yu K. Real-Time Alignment and Reorientation of Polymer Chains in Liquid Crystal Elastomers. ACS Appl Mater Interfaces 2022; 14:1961-1972. [PMID: 34931796 DOI: 10.1021/acsami.1c20082] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/14/2023]
Abstract
Liquid crystal elastomers (LCEs) exhibit soft elasticity due to the alignment and reorientation of mesogens upon mechanical loading, which provides additional mechanisms to absorb and dissipate energy. This enhanced response makes LCEs potentially transformative materials for biomedical devices, tissue replacements, and protective equipment. However, there is a critical knowledge gap in understanding the highly rate-dependent dissipative behaviors of LCEs due to the lack of real-time characterization techniques that probe the microscale network structure and link it to the mechanical deformation of LCEs. In this work, we employ in situ optical measurements to evaluate the alignment and reorientation degree of mesogens in LCEs. The data are correlated to the quantitative physical analysis using polarized Fourier-transform infrared spectroscopy. The time scale of mesogen alignment is determined at different strain levels and loading rates. The mesogen reorientation kinetics is characterized to establish its relationship with the macroscale tensile strain, and compared to theoretical predictions. Overall, this work provides the first detailed study on the time-dependent evolution of mesogen alignment and reorientation in deformed LCEs. It also provides an effective and more accessible approach for other researchers to investigate the structural-property relationships of different types of polymers.
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Affiliation(s)
- Chaoqian Luo
- Department of Mechanical Engineering, University of Colorado Denver, Denver, Colorado 80217, United States
| | - Christopher Chung
- Department of Mechanical Engineering, University of Colorado Denver, Denver, Colorado 80217, United States
| | - Christopher M Yakacki
- Department of Mechanical Engineering, University of Colorado Denver, Denver, Colorado 80217, United States
| | - Kevin Long
- Materials and Failure Modeling Department, Sandia National Laboratories, Albuquerque, New Mexico 87123, United States
| | - Kai Yu
- Department of Mechanical Engineering, University of Colorado Denver, Denver, Colorado 80217, United States
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Olovnikov AM. Role of the Earth's Motions in Plant Orientation - Planetary Mechanism. Biochemistry Moscow 2021; 86:1388-1394. [PMID: 34906043 DOI: 10.1134/s0006297921110031] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/06/2021] [Revised: 10/06/2021] [Accepted: 10/07/2021] [Indexed: 06/14/2023]
Abstract
According to the proposed theory, the starch-rich particles (statoliths) help the plant to convert the signals from Earth's motions into the signals necessary for the plant to perceive its orientation relative to the gravity vector while moving freely because of inertia in the sensory cells (statocytes) of roots and stems. Motions of the Earth are never constant, which, in particular, refers to the so-called polar motions and oscillations of the planet's rotation axis. Statoliths at any given moment move in the cytoplasmic liquid of statocytes due to inertial motion initiated by the action of the Earth's movements, maintaining the trajectory set by the previous movement of the oscillating planet. Unlike statoliths, the walls of a statocyte move in space along with the entire plant and with the Earth, in strict accordance with the current direction of motion of the planet's axis. This leads to the inevitable collision of statoliths with the statocytic wall/membrane. Cytoplasmic liquid, as a substance that is not able to maintain its shape, does not interfere with the inertial motions of the statoliths and collision with the wall of the statocyte. By striking the membrane, statoliths cause the release of ions and other factors at the impact site, which further participate in the gravitropic process. Pressure of the sediment of statoliths at the bottom of the statocyte, as well as position of this sediment, are not the defining factors of gravitropism.
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Affiliation(s)
- Alexey M Olovnikov
- Emanuel Institute of Biochemical Physics, Russian Academy of Sciences, Moscow, 119334, Russia.
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11
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Agudelo J, Bossa GV, May S. Incorporation of Molecular Reorientation into Modeling Surface Pressure-Area Isotherms of Langmuir Monolayers. Molecules 2021; 26:4372. [PMID: 34299646 PMCID: PMC8303322 DOI: 10.3390/molecules26144372] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/24/2021] [Revised: 07/08/2021] [Accepted: 07/16/2021] [Indexed: 11/16/2022] Open
Abstract
Langmuir monolayers can be assembled from molecules that change from a low-energy orientation occupying a large cross-sectional area to a high-energy orientation of small cross-sectional area as the lateral pressure grows. Examples include cyclosporin A, amphotericin B, nystatin, certain alpha-helical peptides, cholesterol oxydation products, dumbbell-shaped amphiphiles, organic-inorganic nanoparticles and hybrid molecular films. The transition between the two orientations leads to a shoulder in the surface pressure-area isotherm. We propose a theoretical model that describes the shoulder and can be used to extract the energy cost per molecule for the reorientation. Our two-state model is based on a lattice-sublattice approximation that hosts the two orientations and a corresponding free energy expression which we minimize with respect to the orientational distribution. Inter-molecular interactions other than steric repulsion are ignored. We provide an analysis of the model, including an analytic solution for one specific lateral pressure near a point of inflection in the surface pressure-area isotherm, and an approximate solution for the entire range of the lateral pressures. We also use our model to estimate energy costs associated with orientational transitions from previously reported experimental surface pressure-area isotherms.
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Affiliation(s)
- José Agudelo
- Department of Physics, North Dakota State University, Fargo, ND 58108-6050, USA
| | - Guilherme Volpe Bossa
- Department of Physics, Institute of Biosciences, Humanities and Exact Sciences, São Paulo State University (UNESP), São José do Rio Preto 15054-000, SP, Brazil
| | - Sylvio May
- Department of Physics, North Dakota State University, Fargo, ND 58108-6050, USA
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12
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McGee OM, Nolan DR, Mathieu PS, Lally C. An in-silico Investigation Into the Role of Strain and Structure on Vascular Smooth Muscle Cell Growth. Front Bioeng Biotechnol 2021; 9:641794. [PMID: 33959595 PMCID: PMC8093633 DOI: 10.3389/fbioe.2021.641794] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/14/2020] [Accepted: 03/25/2021] [Indexed: 11/15/2022] Open
Abstract
The orientation of vascular cells can greatly influence the in vivo mechanical properties and functionality of soft vascular tissues. How cell orientation mediates the growth response of cells is of critical importance in understanding the response of soft tissues to mechanical stimuli or injury. To date, considerable evidence has shown that cells align with structural cues such as collagen fibers. However, in the presence of uniaxial cyclic strain on unstructured substrates, cells generally align themselves perpendicularly to the mechanical stimulus, such as strain, a phenomenon known as “strain avoidance.” The cellular response to this interplay between structural cues and a mechanical stimulus is poorly understood. A recent in vitro experimental study in our lab has investigated both the individual and collective response of rat aortic smooth muscle cells (RASMC) to structural (collagenous aligned constructs) and mechanical (cyclic strain) cues. In this study, a 2D agent-based model (ABM) is developed to simulate the collective response of RASMC to varying amplitudes of cyclic strain (0–10%, 2–8%, 4–6%) when seeded on unstructured (PDMS) and structured (decellularized collagenous tissue) constructs. An ABM is presented that is fit to the experimental outcomes in terms of cellular alignment and cell growth on PDMS substrates, under cyclic strain amplitudes of (4–6%, 2–8%, 0–10%) at 24 and 72 h timepoints. Furthermore, the ABM can predict RASMC alignment and change in cell number on a structured construct at a cyclic strain amplitude of 0–10% after 10 days. The ABM suggests that strain avoidance behavior observed in cells is dominated by selective cell proliferation and apoptosis at these early time points, as opposed to cell re-orientation, i.e., cells perpendicular to the strain increase their rate of proliferation, whilst the rate of apoptosis simultaneously increases in cells parallel to the strain direction. The development of in-silico modeling platforms, such as that presented here, allow for further understanding of the response of cells to changes in their mechanical environment. Such models offer an efficient and robust means to design and optimize the compliance and topological structure of implantable devices and could be used to aid the design of next-generation vascular grafts and stents.
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Affiliation(s)
- Orla M McGee
- Trinity Centre for Biomedical Engineering, Trinity College Dublin, Trinity Biomedical Sciences Institute, Dublin, Ireland.,Department of Mechanical, Manufacturing & Biomedical Engineering, School of Engineering, Trinity College Dublin, Dublin, Ireland
| | - David R Nolan
- Trinity Centre for Biomedical Engineering, Trinity College Dublin, Trinity Biomedical Sciences Institute, Dublin, Ireland.,Department of Mechanical, Manufacturing & Biomedical Engineering, School of Engineering, Trinity College Dublin, Dublin, Ireland
| | - Pattie S Mathieu
- Trinity Centre for Biomedical Engineering, Trinity College Dublin, Trinity Biomedical Sciences Institute, Dublin, Ireland.,Department of Mechanical, Manufacturing & Biomedical Engineering, School of Engineering, Trinity College Dublin, Dublin, Ireland
| | - Caitríona Lally
- Trinity Centre for Biomedical Engineering, Trinity College Dublin, Trinity Biomedical Sciences Institute, Dublin, Ireland.,Department of Mechanical, Manufacturing & Biomedical Engineering, School of Engineering, Trinity College Dublin, Dublin, Ireland.,Advanced Materials and Bioengineering Research Centre (AMBER), Royal College of Surgeons in Ireland & Trinity College Dublin, Dublin, Ireland
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Staynor JMD, Alderson JA, Byrne S, Rossi M, Donnelly CJ. By failing to prepare, you are preparing your anterior cruciate ligament to fail. Scand J Med Sci Sports 2020; 30:303-311. [PMID: 31605551 DOI: 10.1111/sms.13571] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/03/2018] [Revised: 09/17/2019] [Accepted: 10/07/2019] [Indexed: 01/14/2023]
Abstract
There is strong evidence linking an athlete's movement technique during sidestepping with anterior cruciate ligament (ACL) injury risk. However, it is unclear how these injurious postures are influenced by prior movement. We aim to describe preparatory trunk and thigh kinematics at toe-off of the penultimate-step and flight-phase angular momenta, and explore their associations with frontal-plane risk factors during unplanned sidestepping maneuvers. We analyzed kinematic and kinetic data of 33 male Australian Football players performing unplanned sidestepping tasks (103 trials). Linear mixed models tested for reliable associations between ACL injury risk during weight acceptance of the execution-step, with preparatory kinematics and angular momenta of the trunk and thigh during the penultimate-step. Multi-planar flight-phase trunk momenta along with hip abduction angle at penultimate-step toe-off were significantly associated with peak knee valgus moments during the execution-step (R2 = .21, P < .01). Execution-step trunk lateral flexion was significantly predicted by frontal and sagittal-plane preparatory trunk positioning at toe-off of the penultimate-step (R2 = .44, P < .01). Multi-planar flight-phase trunk momenta as well as multi-planar trunk and hip positioning at penultimate-step toe-off were associated with hip abduction during the execution-step (R2 = .53, P < .01). Preparatory positioning of the trunk and hip, along with flight-phase trunk momentum adjusting this positioning are linked to known ACL injury risk factors. We recommend that during the penultimate-step athletes maintain an upright trunk, as well as minimize frontal-plane trunk momentum and transverse-plane trunk momentum toward the sidestep direction to reduce risk of ACL injury during unplanned sidesteps.
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Affiliation(s)
- Jonathan M D Staynor
- School of Human Sciences (Exercise and Sport Science), University of Western Australia, Crawley, WA, Australia
| | - Jacqueline A Alderson
- School of Human Sciences (Exercise and Sport Science), University of Western Australia, Crawley, WA, Australia
- Auckland University of Technology, Sports Performance Research Institute New Zealand (SPRINZ), Auckland, New Zealand
| | - Sean Byrne
- School of Human Sciences (Exercise and Sport Science), University of Western Australia, Crawley, WA, Australia
| | - Marcel Rossi
- School of Human Sciences (Exercise and Sport Science), University of Western Australia, Crawley, WA, Australia
- Singapore Sports Institute, Singapore Sports, Singapore, Singapore
| | - Cyril J Donnelly
- School of Human Sciences (Exercise and Sport Science), University of Western Australia, Crawley, WA, Australia
- Rehabilitation Research Institute of Singapore, Nanyang Technological University, Singapore, Singapore
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White KI, Bugris V, McCarthy AA, Ravelli RBG, Csankó K, Cassetta A, Brockhauser S. Calibration of rotation axes for multi-axis goniometers in macromolecular crystallography. J Appl Crystallogr 2018; 51:1421-1427. [PMID: 30279641 PMCID: PMC6157707 DOI: 10.1107/s1600576718010956] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/10/2018] [Accepted: 07/31/2018] [Indexed: 11/10/2022] Open
Abstract
An easy to perform rotation calibration procedure has been developed for miniKappa and/or other multi-axis goniometers used in macromolecular crystallography to enhance the precision of experiments involving crystal reorientations. The installation of multi-axis goniometers such as the ESRF/EMBL miniKappa goniometer system has allowed the increased use of sample reorientation in macromolecular crystallography. Old and newly appearing data collection methods require precision and accuracy in crystal reorientation. The proper use of such multi-axis systems has necessitated the development of rapid and easy to perform methods for establishing and evaluating device calibration. A new diffraction-based method meeting these criteria has been developed for the calibration of the motors responsible for rotational motion. This method takes advantage of crystal symmetry by comparing the orientations of a sample rotated about a given axis and checking that the magnitude of the real rotation fits the calculated angle between these two orientations. Hence, the accuracy and precision of rotational motion can be assessed. This rotation calibration procedure has been performed on several beamlines at the ESRF and other synchrotrons. Some resulting data are presented here for reference.
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Affiliation(s)
- K Ian White
- Department of Molecular and Cellular Physiology, Stanford University, Campus Drive, Stanford, CA 94305, USA.,European Molecular Biology Laboratory, Grenoble Outstation, 71 avenue des Martyrs, Grenoble, 38042, France.,Howard Hughes Medical Institute, Stanford University, Stanford, CA 94305, USA
| | - Valeria Bugris
- Biological Research Centre (BRC), Hungarian Academy of Sciences, Temesvári körút 62, Szeged, Csongrad 6726, Hungary
| | - Andrew A McCarthy
- European Molecular Biology Laboratory, Grenoble Outstation, 71 avenue des Martyrs, Grenoble, 38042, France
| | - Raimond B G Ravelli
- European Molecular Biology Laboratory, Grenoble Outstation, 71 avenue des Martyrs, Grenoble, 38042, France.,M4I Division of Nanoscopy, Maastricht University, PO Box 616, MD Maastricht, 6200, The Netherlands
| | - Krisztián Csankó
- Biological Research Centre (BRC), Hungarian Academy of Sciences, Temesvári körút 62, Szeged, Csongrad 6726, Hungary
| | - Alberto Cassetta
- XRD1 Beamline - Elettra, CNR - Istituto di Cristallografia - Unità di Trieste, S.S. 14 Km 163,5, Trieste, Basovizza I-34012, Italy
| | - Sandor Brockhauser
- European Molecular Biology Laboratory, Grenoble Outstation, 71 avenue des Martyrs, Grenoble, 38042, France.,Biological Research Centre (BRC), Hungarian Academy of Sciences, Temesvári körút 62, Szeged, Csongrad 6726, Hungary.,European X-ray Free-Electron Laser Facility GmbH (XFEL.EU), Holzkoppel 4, Hamburg, Schenefeld 22869, Germany
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15
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Newton MD, Hartner S, Gawronski K, Maerz T. Error introduced by common reorientation algorithms in the assessment of rodent trabecular morphometry using micro-computed tomography. J Orthop Res 2018; 36:2762-2770. [PMID: 29744917 DOI: 10.1002/jor.24039] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 11/10/2017] [Accepted: 04/17/2018] [Indexed: 02/04/2023]
Abstract
Quantitative analyses of bone using micro-computed tomography (μCT) are routinely employed in preclinical research, and virtual image reorientation to a consistent reference frame is a common processing step. The purpose of this study was to quantify error introduced by common reorientation algorithms in μCT-based characterization of bone. Mouse and rat tibial metaphyses underwent μCT scanning at a range of resolutions (6-30 μm). A trabecular volume-of-interest (VOI) was manually selected. Image stacks were analyzed without rotation, following 45° In-Plane axial rotation, and following 45° Triplanar rotation. Interpolation was performed using Nearest-Neighbor, Linear, and Cubic interpolations. Densitometric (bone volume fraction, tissue mineral density, bone mineral density) and morphometric variables (trabecular thickness, trabecular spacing, trabecular number, structural model index) were computed for each combination of voxel size, rotation, and interpolation. Significant reorientation error was measured in all parameters, and was exacerbated at higher voxel sizes, with relatively low error at 6 and 12 μm (max. reorientation error in BV/TV was 2.9% at 6 μm, 7.7% at 12 μm and 36.5% at 30 μm). Considering densitometric parameters, Linear and Cubic interpolations introduced significant error while Nearest-Neighbor interpolation caused minimal error, and In-Plane rotation caused greater error than Triplanar. Morphometric error was strongly and intricately dependent on the combination of rotation and interpolation employed. Reorientation error can be eliminated by avoiding reorientation altogether or by "de-rotating" VOIs from reoriented images back to the original reference frame prior to analysis. When these are infeasible, reorientation error can be minimized through sufficiently high resolution scanning, careful selection of interpolation type, and consistent processing of all images. © 2018 Orthopaedic Research Society. Published by Wiley Periodicals, Inc. J Orthop Res 36:2762-2770, 2018.
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Affiliation(s)
- Michael D Newton
- Orthopaedic Research Laboratories, Beaumont Health, 3601 W. 13 Mile Road, Royal Oak, 48073, Michigan
| | - Samantha Hartner
- Orthopaedic Research Laboratories, Beaumont Health, 3601 W. 13 Mile Road, Royal Oak, 48073, Michigan
| | - Karissa Gawronski
- Orthopaedic Research Laboratories, Beaumont Health, 3601 W. 13 Mile Road, Royal Oak, 48073, Michigan.,Department of Orthopaedic Surgery, University of Michigan, Ann Arbor, Michigan
| | - Tristan Maerz
- Department of Orthopaedic Surgery, University of Michigan, Ann Arbor, Michigan
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16
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Caffò AO, Lopez A, Spano G, Serino S, Cipresso P, Stasolla F, Savino M, Lancioni GE, Riva G, Bosco A. Spatial reorientation decline in aging: the combination of geometry and landmarks. Aging Ment Health 2018; 22:1372-1383. [PMID: 28726502 DOI: 10.1080/13607863.2017.1354973] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
Abstract
OBJECTIVES The study is focused on the assessment of reorientation skills in a sample of community-dwelling elderly people, manipulating landmarks and geometric (layout) information. METHOD A neuropsychological assessment was administered to 286 elderly participants, divided into six groups (healthy controls, HC; four subgroups of participants with mild cognitive impairment, MCI; participants with probable dementia, Prob_D) and tested with the Virtual Reorientation Test (VReoT). VReoT manipulated different spatial cues: geometry and landmarks (proximal and distal). RESULT Compared with HC, participants with MCI and Prob_D showed to be impaired in tasks involving geometry, landmarks and a combination of them. Both single and multiple domain impairment in MCI had an impact on reorientation performance. Moreover, VReoT was marginally able to discriminate between amnesic and non-amnesic MCI. The occurrence of getting lost events seemed to be associated to learning of geometric information. CONCLUSION The associative strength between landmark and target plays an important role in affecting spatial orientation performance of cognitively impaired participants. Geometry significantly supports landmark information and becomes helpful with the increase of cognitive impairment which is linked to a decrement in landmark encoding. VReoT seems to represent a reliable evaluation supplement for spatial orientation deficits in prodromal stages of dementia.
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Affiliation(s)
- Alessandro O Caffò
- a Department of Educational Sciences, Psychology, Communication , University of Studies of Bari , Bari , Italy
| | - Antonella Lopez
- a Department of Educational Sciences, Psychology, Communication , University of Studies of Bari , Bari , Italy
| | - Giuseppina Spano
- a Department of Educational Sciences, Psychology, Communication , University of Studies of Bari , Bari , Italy
| | - Silvia Serino
- b Applied Technology for Neuro-Psychology Lab , IRCCS Istituto Auxologico Italiano , Milan , Italy.,c Department of Psychology , Università Cattolica del Sacro Cuore , Milan , Italy
| | - Pietro Cipresso
- c Department of Psychology , Università Cattolica del Sacro Cuore , Milan , Italy
| | - Fabrizio Stasolla
- d Department of Basic Medical Sciences, Neuroscience and Sense Organs , University of Studies of Bari , Bari , Italy
| | - Michelina Savino
- a Department of Educational Sciences, Psychology, Communication , University of Studies of Bari , Bari , Italy
| | - Giulio E Lancioni
- d Department of Basic Medical Sciences, Neuroscience and Sense Organs , University of Studies of Bari , Bari , Italy
| | - Giuseppe Riva
- b Applied Technology for Neuro-Psychology Lab , IRCCS Istituto Auxologico Italiano , Milan , Italy.,c Department of Psychology , Università Cattolica del Sacro Cuore , Milan , Italy
| | - Andrea Bosco
- a Department of Educational Sciences, Psychology, Communication , University of Studies of Bari , Bari , Italy
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17
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Wang G, Garvey CJ, Zhao H, Huang K, Kong L. Toward the Fabrication of Advanced Nanofiltration Membranes by Controlling Morphologies and Mesochannel Orientations of Hexagonal Lyotropic Liquid Crystals. Membranes (Basel) 2017; 7:membranes7030037. [PMID: 28753973 PMCID: PMC5618122 DOI: 10.3390/membranes7030037] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 06/14/2017] [Revised: 07/10/2017] [Accepted: 07/12/2017] [Indexed: 01/27/2023]
Abstract
Water scarcity has been recognized as one of the major threats to human activity, and, therefore, water purification technologies are increasingly drawing attention worldwide. Nanofiltration (NF) membrane technology has been proven to be an efficient and cost-effective way in terms of the size and continuity of the nanostructure. Using a template based on hexagonal lyotropic liquid crystals (LLCs) and partitioning monomer units within this structure for subsequent photo-polymerisation presents a unique path for the fabrication of NF membranes, potentially producing pores of uniform size, ranging from 1 to 5 nm, and large surface areas. The subsequent orientation of this pore network in a direction normal to a flat polymer film that provides ideal transport properties associated with continuous pores running through the membrane has been achieved by the orientation of hexagonal LLCs through various strategies. This review presents the current progresses on the strategies for structure retention from a hexagonal LLCs template and the up-to-date techniques used for the reorientation of mesochanels for continuity through the whole membrane.
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Affiliation(s)
- Guang Wang
- Institute for Frontier Materials, Deakin University, Locked Bag 20000, Geelong 3220, Australia.
| | - Christopher J Garvey
- Australian Nuclear Science and Technology Organization, Locked Bag 2001, Kirrawee DC 2232, Australia.
| | - Han Zhao
- School of Mechanical Engineering, Hefei University of Technology, No. 193 Tunxi Road, Hefei 230009, China.
| | - Kang Huang
- School of Mechanical Engineering, Hefei University of Technology, No. 193 Tunxi Road, Hefei 230009, China.
| | - Lingxue Kong
- Institute for Frontier Materials, Deakin University, Locked Bag 20000, Geelong 3220, Australia.
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18
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García-García A, Vergaz R, Algorri JF, Zito G, Cacace T, Marino A, Otón JM, Geday MA. Reorientation of single-wall carbon nanotubes in negative anisotropy liquid crystals by an electric field. Beilstein J Nanotechnol 2016; 7:825-33. [PMID: 27547599 PMCID: PMC4979768 DOI: 10.3762/bjnano.7.74] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/24/2015] [Accepted: 05/12/2016] [Indexed: 05/02/2023]
Abstract
Single-wall carbon nanotubes (SWCNT) are anisotropic nanoparticles that can cause modifications in the electrical and electro-optical properties of liquid crystals. The control of the SWCNT concentration, distribution and reorientation in such self-organized fluids allows for the possibility of tuning the liquid crystal properties. The alignment and reorientation of CNTs are studied in a system where the liquid crystal orientation effect has been isolated. Complementary studies including Raman spectroscopy, microscopic inspection and impedance studies were carried out. The results reveal an ordered reorientation of the CNTs induced by an electric field, which does not alter the orientation of the liquid crystal molecules. Moreover, impedance spectroscopy suggests a nonnegligible anchoring force between the CNTs and the liquid crystal molecules.
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Affiliation(s)
- Amanda García-García
- CEMDATIC, E.T.S.I. Telecomunicación, Universidad Politécnica de Madrid, Avda. Complutense 30, 28040 Madrid, Spain
| | - Ricardo Vergaz
- GDAF-UC3M, Departamento de Tecnología Electrónica, Universidad Carlos III de Madrid, Butarque 15, Leganés, 28911, Spain
| | - José F Algorri
- GDAF-UC3M, Departamento de Tecnología Electrónica, Universidad Carlos III de Madrid, Butarque 15, Leganés, 28911, Spain
| | - Gianluigi Zito
- CNR-ISASI and Physics Department, University of Naples Federico II, Via Cinthia Monte S. Angelo, 80126, Naples, Italy
| | - Teresa Cacace
- CNR-ISASI and Physics Department, University of Naples Federico II, Via Cinthia Monte S. Angelo, 80126, Naples, Italy
| | - Antigone Marino
- CNR-ISASI and Physics Department, University of Naples Federico II, Via Cinthia Monte S. Angelo, 80126, Naples, Italy
| | - José M Otón
- CEMDATIC, E.T.S.I. Telecomunicación, Universidad Politécnica de Madrid, Avda. Complutense 30, 28040 Madrid, Spain
| | - Morten A Geday
- CEMDATIC, E.T.S.I. Telecomunicación, Universidad Politécnica de Madrid, Avda. Complutense 30, 28040 Madrid, Spain
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Liedel C, Lewin C, Tsarkova L, Böker A. Reversible Switching of Block Copolymer Nanopatterns by Orthogonal Electric Fields. Small 2015; 11:6058-6064. [PMID: 26449286 DOI: 10.1002/smll.201502259] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/29/2015] [Revised: 09/02/2015] [Indexed: 06/05/2023]
Abstract
It is demonstrated that the orientation of striped patterns can be reversibly switched between two perpendicular in-plane orientations upon exposure to electric fields. The results on thin films of symmetric polystyrene-block-poly(2-vinyl pyridine) polymer in the intermediate segregation regime disclose two types of reorientation mechanisms from perpendicular to parallel relative to the electric field orientation. Domains orient via grain rotation and via formation of defects such as stretched undulations and temporal phase transitions. The contribution of additional fields to the structural evolution is also addressed to elucidate the generality of the observed phenomena. In particular solvent effects are considered. This study reveals the stabilization of the meta-stable in-plane oriented lamella due to sequential swelling and quenching of the film. Further, the reorientation behavior of lamella domains blended with selective nanoparticles is addressed, which affect the interfacial tensions of the blocks and hence introduce another internal field to the studied system. Switching the orientation of aligned block copolymer patterns between two orthogonal directions may open new applications of nanomaterials as switchable electric nanowires or optical gratings.
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Affiliation(s)
- Clemens Liedel
- Department of Colloid Chemistry, Max Planck Institute of Colloids and Interfaces, Research Campus Golm, 14476, Potsdam, Germany
| | - Christian Lewin
- Institute of Physical Chemistry, RWTH Aachen University and DWI-Leibniz-Institute for Interactive Materials, Forckenbeckstraße 50, 52056, Aachen, Germany
| | - Larisa Tsarkova
- Institute of Physical Chemistry, RWTH Aachen University and DWI-Leibniz-Institute for Interactive Materials, Forckenbeckstraße 50, 52056, Aachen, Germany
| | - Alexander Böker
- Fraunhofer-Institut für Angewandte Polymerforschung (IAP), Lehrstuhl für Polymermaterialien und Polymertechnologien, Universität Potsdam, Geiselbergstrasse 69, 14476, Potsdam, Germany
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20
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Yen T, Khafaja M, Lam N, Crumbacher J, Schrader R, Rask J, Billstrand M, Rothfork J, Abbott CC. Post-electroconvulsive therapy recovery and reorientation time with methohexital and ketamine: a randomized, longitudinal, crossover design trial. J ECT 2015; 31:20-5. [PMID: 24755722 DOI: 10.1097/YCT.0000000000000132] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
Abstract
OBJECTIVES Methohexital, a barbiturate anesthetic commonly used for electroconvulsive therapy (ECT), possesses dose-dependent anticonvulsant properties, and its use can interfere with effective seizure therapy in patients with high seizure thresholds. Ketamine, an N-methyl-d-aspartate antagonist with epileptogenic properties not broadly used for ECT inductions, is a commonly used induction agent for general anesthesia. Recent studies suggest that the use of ketamine is effective in allowing successful ECT treatment in patients with high seizure thresholds without an increase in adverse effects. In this preliminary study, we directly compared the recovery and reorientation times of subjects receiving ketamine and methohexital for ECTs. METHODS Twenty patients were randomized in a crossover design to receive methohexital and ketamine for ECT inductions in alternating fashion in 6 trials. Primary outcome measures were recovery time (voluntary movement, respiratory effort, blood pressure, consciousness, and O2 saturation) and reorientation time. Secondary outcome measures were individual recovery variables, adverse effect occurrence, and seizure duration. RESULTS Overall recovery time was not significantly different between the 2 treatment arms (F(1, 17) = 0.72; P = 0.41). Reorientation time was faster in the methohexital arm (F(1, 17) = 9.23; P = 0.007). CONCLUSION Ketamine inductions resulted in higher number of adverse effects, higher subject dropout rates, and a longer reorientation time with respect to methohexital inductions. No significant difference in postanesthesia recovery time was found between the ketamine and methohexital arms. Intolerability to ketamine affected a significant proportion of subjects and suggests that ketamine should remain as an alternative or adjunctive agent for patients with high seizure thresholds.
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21
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Rickwood D, Van Dyke N, Telford N. Innovation in youth mental health services in Australia: common characteristics across the first headspace centres. Early Interv Psychiatry 2015; 9:29-37. [PMID: 23827044 DOI: 10.1111/eip.12071] [Citation(s) in RCA: 28] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 02/21/2013] [Accepted: 06/02/2013] [Indexed: 11/28/2022]
Abstract
AIM headspace centres comprise a significant innovation in community-based youth mental health service delivery in Australia. This paper examines the service activity of the first headspace centres to determine common and unique practice characteristics across headspace centres in this new approach to mental health service delivery. METHODS Data come from quarterly progress reports provided by the first 30 headspace centres during the 2010-2011 financial year. The information from 120 reports was analysed qualitatively using thematic analysis techniques to determine the types of activities reported by centres against key performance indicators. RESULTS The main finding was the large number and wide range of centre activity. This heterogeneity may be explained in part by the diversity of communities across Australia and the importance that headspace places on addressing the specific needs of the local community as well as drawing upon the existing capacity that is available within a community. The most common activities were community engagement, building local partnerships and providing a youth friendly environment. There was a particularly strong focus by the majority of centres on establishing and supporting a Youth Reference Group to guide centre development and implementation. CONCLUSIONS The progressive upscaling of headspace centres across Australia provides a unique opportunity to observe how a significant reorientation in health service delivery is implemented in practice to meet the needs of diverse communities. Further investigation of the headspace experience will provide critical lessons for other countries investing in new approaches to youth mental health.
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Affiliation(s)
- Debra Rickwood
- Faculty of Health, University of Canberra, Canberra, Australian Capital Territory, Australia; headspace National Youth Mental Health Foundation, Melbourne, Victoria, Australia
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22
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Abstract
In polymers, the rotation of a small solute is nonexponential. Either heterogeneity in the local friction or local anisotropy-a homogeneous process-may be responsible. A new, two-dimensional anisotropy experiment is demonstrated on this problem. In poly(dimethylsiloxane), the rotation of individual solute molecules is found to be exponential, and the observed rate dispersion is primarily due to variation in the local friction. This sample is far from its glass transition. Studies of rate heterogeneity associated with the glass transition must account for the contribution from this polymer-related mechanism.
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Affiliation(s)
- Haorui Wu
- Department of Chemistry and Biochemistry, University of South Carolina, Columbia, South Carolina 29208, United States
| | - Mark A Berg
- Department of Chemistry and Biochemistry, University of South Carolina, Columbia, South Carolina 29208, United States
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Hsieh CS, Campen RK, Okuno M, Backus EH, Nagata Y, Bonn M. Mechanism of vibrational energy dissipation of free OH groups at the air-water interface. Proc Natl Acad Sci U S A 2013; 110:18780-5. [PMID: 24191016 DOI: 10.1073/pnas.1314770110] [Citation(s) in RCA: 60] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
Abstract
Interfaces of liquid water play a critical role in a wide variety of processes that occur in biology, a variety of technologies, and the environment. Many macroscopic observations clarify that the properties of liquid water interfaces significantly differ from those of the bulk liquid. In addition to interfacial molecular structure, knowledge of the rates and mechanisms of the relaxation of excess vibrational energy is indispensable to fully understand physical and chemical processes of water and aqueous solutions, such as chemical reaction rates and pathways, proton transfer, and hydrogen bond dynamics. Here we elucidate the rate and mechanism of vibrational energy dissipation of water molecules at the air-water interface using femtosecond two-color IR-pump/vibrational sum-frequency probe spectroscopy. Vibrational relaxation of nonhydrogen-bonded OH groups occurs at a subpicosecond timescale in a manner fundamentally different from hydrogen-bonded OH groups in bulk, through two competing mechanisms: intramolecular energy transfer and ultrafast reorientational motion that leads to free OH groups becoming hydrogen bonded. Both pathways effectively lead to the transfer of the excited vibrational modes from free to hydrogen-bonded OH groups, from which relaxation readily occurs. Of the overall relaxation rate of interfacial free OH groups at the air-H2O interface, two-thirds are accounted for by intramolecular energy transfer, whereas the remaining one-third is dominated by the reorientational motion. These findings not only shed light on vibrational energy dynamics of interfacial water, but also contribute to our understanding of the impact of structural and vibrational dynamics on the vibrational sum-frequency line shapes of aqueous interfaces.
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Abstract
This paper presents an algorithm to transform and reconstruct diffusion-weighted imaging (DWI) data for alignment of micro-structures in association with spatial transformations. The key idea is to decompose the diffusion signal profile, a function defined on a unit sphere, into a series of weighted diffusion basis functions (DBFs), reorient these weighted DBFs independently based on the local affine transformation, and then recompose the reoriented weighted DBFs to obtain the final transformed diffusion signal profile. The decomposition is performed in a sparse representation framework in recognition of the fact that each diffusion signal profile is often resulting from a small number of fiber populations. A non-negative constraint is further imposed so that noise-induced negative lobes in the profile can be avoided. The proposed framework also explicitly models the isotropic component of the diffusion signals to avoid undesirable artifacts during transformation. In contrast to existing methods, the current algorithm allows the transformation to be executed directly in the signal space, thus allowing any diffusion models to be fitted to the data after transformation.
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25
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Brockhauser S, Svensson O, Bowler MW, Nanao M, Gordon E, Leal RMF, Popov A, Gerring M, McCarthy AA, Gotz A. The use of workflows in the design and implementation of complex experiments in macromolecular crystallography. Acta Crystallogr D Biol Crystallogr 2012; 68:975-84. [PMID: 22868763 PMCID: PMC3413211 DOI: 10.1107/s090744491201863x] [Citation(s) in RCA: 34] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 10/03/2011] [Accepted: 04/25/2012] [Indexed: 11/10/2022]
Abstract
The automation of beam delivery, sample handling and data analysis, together with increasing photon flux, diminishing focal spot size and the appearance of fast-readout detectors on synchrotron beamlines, have changed the way that many macromolecular crystallography experiments are planned and executed. Screening for the best diffracting crystal, or even the best diffracting part of a selected crystal, has been enabled by the development of microfocus beams, precise goniometers and fast-readout detectors that all require rapid feedback from the initial processing of images in order to be effective. All of these advances require the coupling of data feedback to the experimental control system and depend on immediate online data-analysis results during the experiment. To facilitate this, a Data Analysis WorkBench (DAWB) for the flexible creation of complex automated protocols has been developed. Here, example workflows designed and implemented using DAWB are presented for enhanced multi-step crystal characterizations, experiments involving crystal reorientation with kappa goniometers, crystal-burning experiments for empirically determining the radiation sensitivity of a crystal system and the application of mesh scans to find the best location of a crystal to obtain the highest diffraction quality. Beamline users interact with the prepared workflows through a specific brick within the beamline-control GUI MXCuBE.
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Affiliation(s)
- Sandor Brockhauser
- European Molecular Biology Laboratory, 6 Rue Jules Horowitz, BP 181, 38042 Grenoble, France.
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Reznik C, Berg R, Foster E, Advincula R, Landes CF. Transient 3-Dimensional Orientation of Molecular Ions in an Ordered Polyelectrolyte Membrane. J Phys Chem Lett 2011; 2:10.1021/jz200065f. [PMID: 24371507 PMCID: PMC3871193 DOI: 10.1021/jz200065f] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/23/2023]
Abstract
Single-molecule fluorescence spectroscopy is employed to reveal 3-dimensional details of the mechanisms underpinning ion transport in a polyelectrolyte thin film possessing polymer-brush nanoscale order. The ability to resolve fluorescence emission over three discrete polarization angles reveals that these ordered materials impart 3-dimensional orientation to charged, diffusing molecules. The experiments, supported by simulations, report global orientation parameters for molecular transport, track dipole angle progressions over time, and identify a unique transport mechanism: translational diffusion with restricted rotation. Generally, realization of this experimental method for translational diffusion in systems exhibiting basic orientation should lend itself to evaluation of transport in a variety of important, ordered, functional materials.
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Affiliation(s)
| | | | - Ed Foster
- University of Houston, Houston, Texas 77204
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Yamashita S, Yoshida M, Takayama S, Okuyama T. Stem-righting mechanism in gymnosperm trees deduced from limitations in compression wood development. Ann Bot 2007; 99:487-93. [PMID: 17218339 PMCID: PMC2802951 DOI: 10.1093/aob/mcl270] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/13/2023]
Abstract
BACKGROUND AND AIMS In response to inclination stimuli, gymnosperm trees undergo corrective growth during which compression wood develops on the lower side of the inclined stem. High compressive growth stress is generated in the compression wood region and is an important factor in righting the stem. The aims of the study were to elucidate how the generation of compressive growth stress in the compression wood region is involved in the righting response and thus to determine a righting mechanism for tree saplings. METHODS Cryptomeria japonica saplings were grown at inclinations of 0 degrees (vertical) to 50 degrees. At each inclination angle, the growth stress on the lower side of the inclined stem was investigated, together with the degree of compression-wood development such as the width of the current growth layer and lignin content, and the upward bending moment. KEY RESULTS Growth stress, the degree of compression wood development, and the upward moment grew as the stem inclination angle increased from 0 to 30 degrees, but did not rise further at inclinations > 30 degrees. CONCLUSIONS The results suggest the following righting mechanism for gymnosperm saplings. As the stem inclination is elevated from 0 to 30 degrees, the degree of compression wood development increases to force the sapling back to its original orientation; at inclinations > 30 degrees, the maximum degree of compression wood is formed and additional time is needed for the stem to reorient itself.
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Matsuzaki J, Masumori M, Tange T. Stem phototropism of trees: a possible significant factor in determining stem inclination on forest slopes. Ann Bot 2006; 98:573-81. [PMID: 16790467 PMCID: PMC2803559 DOI: 10.1093/aob/mcl127] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/10/2023]
Abstract
BACKGROUND AND AIMS The main stems of trees on forest slopes incline down the slope to various extents that are characteristic of the species. The inclination has been explained as an active response to a horizontally asymmetrical light environment, but the contributing physiological mechanisms are unknown. The present study tested the hypothesis that stem phototropism, gravitropism, or a combination of the two determines the inclination of tree stems on forest slopes. METHODS Cryptomeria japonica, Pinus densiflora, Quercus myrsinaefolia and Q. serrata were studied. Measurements were made of stem inclination of mature trees on forest slopes in uniform plantations of each species, and changes in stem inclination of potted seedlings in response to illumination treatments (unilateral or overhead) and inclination treatments (artificially inclined or erect). Indices of phototropic and gravitropic responsiveness were evaluated for each species, calculated from the change in stem inclination in response to artificial inclination with unilateral or overhead illumination. KEY RESULTS Stem inclination on forest slopes varied significantly among species: Q. serrata inclined most in the down-slope direction, C. japonica inclined the least, and P. densiflora and Q. myrsinaefolia were intermediate. The change in stem inclination of seedlings in each treatment varied significantly among species. One-year-old stems of Q. serrata and 2-year-old stems of Q. myrsinaefolia bent toward the light source. Interspecific variation in the change in stem inclination in response to the unilateral illumination or that in the index of phototropic responsiveness was strongly correlated with the variation in stem inclination on forest slopes. CONCLUSIONS The orientation of woody stems that have finished elongation can be actively controlled by phototropism. Interspecific variation in phototropic responsiveness of trees is a possible significant determinant of interspecific variation in stem inclination on forest slopes.
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Affiliation(s)
- Jun Matsuzaki
- Department of Forest Science, Graduate School of Agricultural and Life Sciences, The University of Tokyo, Yayoi 1-1-1, Bunkyo-ku, Tokyo 113-8657, Japan.
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