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51
Aykan SA, Xie H, Lai JH, Zheng Y, Chung DY, Kura S, Anzabi M, Sugimoto K, McAllister LM, Yaseen MA, Boas DA, Whalen MJ, Sakadzic S, Ayata C. Focal Subcortical White Matter Lesions Disrupt Resting State Cortical Interhemispheric Functional Connectivity in Mice. Cereb Cortex 2021;31:4958-4969. [PMID: 34037216 PMCID: PMC8491690 DOI: 10.1093/cercor/bhab134] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/08/2020] [Revised: 04/24/2021] [Accepted: 04/25/2021] [Indexed: 02/07/2023]  Open
52
Chung DY, Oka F, Jin G, Harriott A, Kura S, Aykan SA, Qin T, Edmiston WJ, Lee H, Yaseen MA, Sakadžić S, Boas DA, Whalen MJ, Ayata C. Subarachnoid hemorrhage leads to early and persistent functional connectivity and behavioral changes in mice. J Cereb Blood Flow Metab 2021;41:975-985. [PMID: 32936728 PMCID: PMC8054726 DOI: 10.1177/0271678x20940152] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
53
Hartung G, Badr S, Mihelic S, Dunn A, Cheng X, Kura S, Boas DA, Kleinfeld D, Alaraj A, Linninger AA. Mathematical synthesis of the cortical circulation for the whole mouse brain-part II: Microcirculatory closure. Microcirculation 2021;28:e12687. [PMID: 33615601 DOI: 10.1111/micc.12687] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/30/2020] [Revised: 12/23/2020] [Accepted: 02/10/2021] [Indexed: 11/29/2022]
54
Tang J, Cheng X, Kilic K, Devor A, Lee J, Boas DA. Imaging localized fast optical signals of neural activation with optical coherence tomography in awake mice. OPTICS LETTERS 2021;46:1744-1747. [PMID: 33793533 PMCID: PMC8086197 DOI: 10.1364/ol.411897] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/07/2020] [Accepted: 03/10/2021] [Indexed: 05/05/2023]
55
Celaya-Alcala JT, Lee GV, Smith AF, Li B, Sakadžić S, Boas DA, Secomb TW. Simulation of oxygen transport and estimation of tissue perfusion in extensive microvascular networks: Application to cerebral cortex. J Cereb Blood Flow Metab 2021;41:656-669. [PMID: 32501155 PMCID: PMC7922761 DOI: 10.1177/0271678x20927100] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 11/11/2019] [Revised: 01/23/2020] [Accepted: 02/15/2020] [Indexed: 12/13/2022]
56
Cheng X, Sie EJ, Boas DA, Marsili F. Choosing an optimal wavelength to detect brain activity in functional near-infrared spectroscopy. OPTICS LETTERS 2021;46:924-927. [PMID: 33577549 DOI: 10.1364/ol.418284] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/15/2023]
57
Erdener ŞE, Tang J, Kılıç K, Postnov D, Giblin JT, Kura S, Chen ICA, Vayisoğlu T, Sakadžić S, Schaffer CB, Boas DA. Dynamic capillary stalls in reperfused ischemic penumbra contribute to injury: A hyperacute role for neutrophils in persistent traffic jams. J Cereb Blood Flow Metab 2021;41:236-252. [PMID: 32237951 PMCID: PMC8370003 DOI: 10.1177/0271678x20914179] [Citation(s) in RCA: 61] [Impact Index Per Article: 20.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
58
Tang J, Kilic K, Szabo TL, Boas DA. Improved Color Doppler for Cerebral Blood Flow Axial Velocity Imaging. IEEE TRANSACTIONS ON MEDICAL IMAGING 2021;40:758-764. [PMID: 33156785 PMCID: PMC8098776 DOI: 10.1109/tmi.2020.3036468] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/11/2023]
59
Kılıç K, Desjardins M, Tang J, Thunemann M, Sunil S, Erdener ŞE, Postnov DD, Boas DA, Devor A. Chronic Cranial Windows for Long Term Multimodal Neurovascular Imaging in Mice. Front Physiol 2021;11:612678. [PMID: 33551837 PMCID: PMC7862556 DOI: 10.3389/fphys.2020.612678] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/30/2020] [Accepted: 12/18/2020] [Indexed: 01/18/2023]  Open
60
Tahir W, Kura S, Zhu J, Cheng X, Damseh R, Tadesse F, Seibel A, Lee BS, Lesage F, Sakadžic S, Boas DA, Tian L. Anatomical Modeling of Brain Vasculature in Two-Photon Microscopy by Generalizable Deep Learning. BME FRONTIERS 2021. [DOI: 10.34133/2021/8620932] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]  Open
61
Sunil S, Evren Erdener S, Cheng X, Kura S, Tang J, Jiang J, Karrobi K, Kılıç K, Roblyer D, Boas DA. Stroke core revealed by tissue scattering using spatial frequency domain imaging. NEUROIMAGE-CLINICAL 2020;29:102539. [PMID: 33385882 PMCID: PMC7779322 DOI: 10.1016/j.nicl.2020.102539] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 07/18/2020] [Revised: 12/14/2020] [Accepted: 12/15/2020] [Indexed: 12/26/2022]
62
Tahir W, Kura S, Zhu J, Cheng X, Damseh R, Tadesse F, Seibel A, Lee BS, Lesage F, Sakadžic S, Boas DA, Tian L. Anatomical Modeling of Brain Vasculature in Two-Photon Microscopy by Generalizable Deep Learning. BME FRONTIERS 2020;2020:8620932. [PMID: 37849965 PMCID: PMC10521669 DOI: 10.34133/2020/8620932] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/14/2020] [Accepted: 11/12/2020] [Indexed: 10/19/2023]  Open
63
Bordoni L, Li B, Kura S, Boas DA, Sakadžić S, Østergaard L, Frische S, Gutiérrez-Jiménez E. Quantification of Capillary Perfusion in an Animal Model of Acute Intracranial Hypertension. J Neurotrauma 2020;38:446-454. [PMID: 32998634 DOI: 10.1089/neu.2019.6901] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/18/2023]  Open
64
Postnov DD, Tang J, Erdener SE, Kılıç K, Boas DA. Dynamic light scattering imaging. SCIENCE ADVANCES 2020;6:6/45/eabc4628. [PMID: 33158865 PMCID: PMC7673709 DOI: 10.1126/sciadv.abc4628] [Citation(s) in RCA: 56] [Impact Index Per Article: 14.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/28/2020] [Accepted: 09/17/2020] [Indexed: 05/18/2023]
65
Yang J, Chen IA, Chang S, Tang J, Lee B, Kılıç K, Sunil S, Wang H, Varadarajan D, Magnain C, Chen SC, Costantini I, Pavone F, Fischl B, Boas DA. Improving the characterization of ex vivo human brain optical properties using high numerical aperture optical coherence tomography by spatially constraining the confocal parameters. NEUROPHOTONICS 2020;7:045005. [PMID: 33094126 PMCID: PMC7575831 DOI: 10.1117/1.nph.7.4.045005] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/23/2020] [Accepted: 09/30/2020] [Indexed: 05/24/2023]
66
Xue Y, Davison IG, Boas DA, Tian L. Single-shot 3D wide-field fluorescence imaging with a Computational Miniature Mesoscope. SCIENCE ADVANCES 2020;6:eabb7508. [PMID: 33087364 PMCID: PMC7577725 DOI: 10.1126/sciadv.abb7508] [Citation(s) in RCA: 28] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/26/2020] [Accepted: 09/09/2020] [Indexed: 05/20/2023]
67
von Lühmann A, Li X, Gilmore N, Boas DA, Yücel MA. Open Access Multimodal fNIRS Resting State Dataset With and Without Synthetic Hemodynamic Responses. Front Neurosci 2020;14:579353. [PMID: 33132833 PMCID: PMC7550457 DOI: 10.3389/fnins.2020.579353] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/02/2020] [Accepted: 08/19/2020] [Indexed: 11/13/2022]  Open
68
Tang J, Postnov DD, Kilic K, Erdener SE, Lee B, Giblin JT, Szabo TL, Boas DA. Functional Ultrasound Speckle Decorrelation-Based Velocimetry of the Brain. ADVANCED SCIENCE (WEINHEIM, BADEN-WURTTEMBERG, GERMANY) 2020;7:2001044. [PMID: 32999839 PMCID: PMC7509671 DOI: 10.1002/advs.202001044] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/20/2020] [Revised: 05/20/2020] [Indexed: 05/25/2023]
69
Kılıç K, Tang J, Erdener ŞE, Sunil S, Giblin JT, Lee BS, Postnov DD, Chen A, Boas DA. Chronic Imaging of Mouse Brain: From Optical Systems to Functional Ultrasound. CURRENT PROTOCOLS IN NEUROSCIENCE 2020;93:e98. [PMID: 32584495 PMCID: PMC7441818 DOI: 10.1002/cpns.98] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
70
Secomb TW, Bullock KV, Boas DA, Sakadžić S. The mass transfer coefficient for oxygen transport from blood to tissue in cerebral cortex. J Cereb Blood Flow Metab 2020;40:1634-1646. [PMID: 31423930 PMCID: PMC7370375 DOI: 10.1177/0271678x19870068] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
71
Robinson MB, Carp SA, Peruch A, Boas DA, Franceschini MA, Sakadžić S. Characterization of continuous wave ultrasound for acousto-optic modulated diffuse correlation spectroscopy (AOM-DCS). BIOMEDICAL OPTICS EXPRESS 2020;11:3071-3090. [PMID: 32637242 PMCID: PMC7316011 DOI: 10.1364/boe.390322] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/11/2020] [Revised: 04/03/2020] [Accepted: 04/25/2020] [Indexed: 05/25/2023]
72
Cheng X, Sadegh S, Zilpelwar S, Devor A, Tian L, Boas DA. Comparing the fundamental imaging depth limit of two-photon, three-photon, and non-degenerate two-photon microscopy. OPTICS LETTERS 2020;45:2934-2937. [PMID: 32412504 PMCID: PMC8059139 DOI: 10.1364/ol.392724] [Citation(s) in RCA: 14] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/12/2020] [Accepted: 04/17/2020] [Indexed: 05/12/2023]
73
Xie H, Chung DY, Kura S, Sugimoto K, Aykan SA, Wu Y, Sakadžić S, Yaseen MA, Boas DA, Ayata C. Differential effects of anesthetics on resting state functional connectivity in the mouse. J Cereb Blood Flow Metab 2020;40:875-884. [PMID: 31092086 PMCID: PMC7168791 DOI: 10.1177/0271678x19847123] [Citation(s) in RCA: 20] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 02/15/2019] [Revised: 03/26/2019] [Accepted: 03/29/2019] [Indexed: 02/05/2023]
74
Tamborini D, Stephens KA, Wu MM, Farzam P, Siegel AM, Shatrovoy O, Blackwell M, Boas DA, Carp SA, Franceschini MA. Corrections to “Portable System for Time-Domain Diffuse Correlation Spectroscopy” [Nov 19 3014-3025]. IEEE Trans Biomed Eng 2020;67:1229. [DOI: 10.1109/tbme.2020.2974136] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
75
Secomb TW, Celaya-Alcala JT, Boas DA, Sakadžić S. The Problem of Estimating Tissue Perfusion from Observations of Microvascular Flow. FASEB J 2020. [DOI: 10.1096/fasebj.2020.34.s1.05843] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
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