Sustained effects of volcanic ash on biofilm stoichiometry, enzyme activity and community composition in North- Patagonia streams

Volcanic eruptions are extreme perturbations that affect ecosystems. These events can also produce persistent effects in the environment for several years after the eruption, with increased concentrations of suspended particles and the introduction of elements in the water column. On 4th June 2011, the Puyehue-Cordón Caulle Volcanic Complex (40.59°S-72.11°W, 2200m.a.s.l.) erupted explosively in southern Chile. The area affected by the volcano was devastated; a thick layer of volcanic ash (up to 30cm) was deposited in areas 50 km east of the volcano towards Argentina. The aim of the present study was to evaluate the effect of volcanic ash deposits on stream ecosystems four years after the eruption, comparing biofilm stoichiometry, alkaline phosphatase activity, and primary producer's assemblage in streams which were severely affected by the volcano with unaffected streams. We confirmed in the laboratory that ash deposited in the catchment of affected streams still leach phosphorus (P) into the water four years after eruption. Results indicate that affected streams still receive volcanic particles and that these particles release P, thus stream water exhibits high P concentration. Biofilm P content was higher and the C:P ratio lower in affected streams compared to unaffected streams. As a consequence of less P in unaffected streams, the alkaline phosphatase activity was higher compared to affected streams. Cyanobacteria increased their abundances (99.9% of total algal biovolume) in the affected streams suggesting that the increase in P may positively affect this group. On the contrary, unaffected streams contained a diatom dominant biofilm. In this way, local heterogeneity was created between sub-catchments located within 30 km of each other. These types of events should be seen as opportunities to gather valuable ecological information about how severe disturbances, like volcanic eruptions, shape landscapes and lotic systems for several years after the event.

Assessing the disturbance potential of small unoccupied aircraft systems (UAS) on gray seals (Halichoerus grypus) at breeding colonies in Nova Scotia, Canada

The use of small unoccupied aircraft systems (UAS) for ecological studies and wildlife population assessments is increasing. These methods can provide significant benefits in terms of costs and reductions in human risk, but little is known if UAS-based approaches cause disturbance of animals during operations. To address this knowledge gap, we conducted a series of UAS flights at gray seal breeding colonies on Hay and Saddle Islands in Nova Scotia, Canada. Using a small fixed-wing UAS, we assessed both immediate and short-term effects of surveys using sequential image analysis and between-flight seal counts in ten, 50 m² random quadrats at each colony. Counts of adult gray seals and young-of-the-year animals between first and second flights revealed no changes in abundance in quadrats (matched pair t-test p > 0.69) and slopes approaching 1 for linear regression comparisons (r² > 0.80). Sequential image analysis revealed no changes in orientation or posture of imaged animals. We also assessed the acoustic properties of the small UAS in relation to low ambient noise conditions using sound equivalent level (Leq) measurements with a calibrated U-MIK 1 and a 1/3 octave band soundscape approach. The results of Leq measurements indicate that small fixed-wing UAS are quiet, with most energy above 160 Hz, and that levels across 1/3 octave bands do not greatly exceed ambient acoustic measurements in a quiet field during operations at standard survey altitudes. As such, this platform is unlikely to acoustically disturb gray seals at breeding colonies during population surveys. The results of the present study indicate that the effects of small fixed-wing UAS on gray seals at breeding colonies are negligible, and that fixed-wing UAS-based approaches should be considered amongst best practices for assessing gray seal colonies.

Shifting stream planform state decreases stream productivity yet increases riparian animal production

In the Colorado Front Range (USA), disturbance history dictates stream planform. Undisturbed, old-growth streams have multiple channels and large amounts of wood and depositional habitat. Disturbed streams (wildfires and logging < 200 years ago) are single-channeled with mostly erosional habitat. We tested how these opposing stream states influenced organic matter, benthic macroinvertebrate secondary production, emerging aquatic insect flux, and riparian spider biomass. Organic matter and macroinvertebrate production did not differ among sites per unit area (m^-2), but values were 2 ×-21 × higher in undisturbed reaches per unit of stream valley (m^-1 valley) because total stream area was higher in undisturbed reaches. Insect emergence was similar among streams at the per unit area and per unit of stream valley. However, rescaling insect emergence to per meter of stream bank showed that the emerging insect biomass reaching the stream bank was lower in undisturbed sites because multi-channel reaches had 3 × more stream bank than single-channel reaches. Riparian spider biomass followed the same pattern as emerging aquatic insects, and we attribute this to bottom-up limitation caused by the multi-channeled undisturbed sites diluting prey quantity (emerging insects) reaching the stream bank (riparian spider habitat). These results show that historic landscape disturbances continue to influence stream and riparian communities in the Colorado Front Range. However, these legacy effects are only weakly influencing habitat-specific function and instead are primarily influencing stream-riparian community productivity by dictating both stream planform (total stream area, total stream bank length) and the proportional distribution of specific habitat types (pools vs riffles).

Quantifying deforestation and forest degradation with thermal response

Deforestation and forest degradation cause the deterioration of resources and ecosystem services. However, there are still no operational indicators to measure forest status, especially for forest degradation. In the present study, we analysed the thermal response number (TRN, calculated by daily total net radiation divided by daily temperature range) of 163 sites including mature forest, disturbed forest, planted forest, shrubland, grassland, savanna vegetation and cropland. TRN generally increased with latitude, however the regression of TRN against latitude differed among vegetation types. Mature forests are superior as thermal buffers, and had significantly higher TRN than disturbed and planted forests. There was a clear boundary between TRN of forest and non-forest vegetation (i.e. grassland and savanna) with the exception of shrubland, whose TRN overlapped with that of forest vegetation. We propose to use the TRN of local mature forest as the optimal TRN (TRN_opt). A forest with lower than 75% of TRN_opt was identified as subjected to significant disturbance, and forests with 66% of TRN_opt was the threshold for deforestation within the absolute latitude from 30° to 55°. Our results emphasized the irreplaceable thermal buffer capacity of mature forest. TRN can be used for early warning of deforestation and degradation risk. It is therefore a valuable tool in the effort to protect forests and prevent deforestation.

Fire and grazing modulate the structure and resistance of plant-floral visitor networks in a tallgrass prairie

Significant loss of pollinator taxa and their interactions with flowering plants has resulted in growing reductions to pollination services globally. Ecological network analysis is a useful tool for evaluating factors that alter the interaction structure and resistance of systems to species loss, but is rarely applied across multiple empirical networks sampled within the same study. The non-random arrangement of species interactions within a community, or "network structure" such as nested or modular organization, is predicted to prevent extinction cascades in ecological networks. How ecological gradients such as disturbance regimes shape network structural properties remains poorly understood despite significant efforts to quantify interaction structure in natural systems. Here, we examine changes in the structure of plant-floral visitor networks in a tallgrass prairie using a decadal and landscape-scale experiment that manipulates prescribed burn frequency and ungulate grazing, resulting in different grassland states. Plant and floral visitor communities and accompanying network structure were impacted by grassland fire and grazing regimes. The presence of grazers increased flowering plant species richness, network floral visitor species richness, and decreased network nestedness. Fire frequency affected flowering plant and floral visitor community composition; community composition impacted network specialization and modularity. Grassland state resulting from fire-grazing interactions has important implications for the resistance of flowering plant and floral visitor communities to species loss.

Current remote sensing approaches to monitoring forest degradation in support of countries measurement, reporting and verification (MRV) systems for REDD

Forest degradation is a global phenomenon and while being an important indicator and precursor to further forest loss, carbon emissions due to degradation should also be accounted for in national reporting within the frame of UN REDD+. At regional to country scales, methods have been progressively developed to detect and map forest degradation, with these based on multi-resolution optical, synthetic aperture radar (SAR) and/or LiDAR data. However, there is no one single method that can be applied to monitor forest degradation, largely due to the specific nature of the degradation type or process and the timeframe over which it is observed. The review assesses two main approaches to monitoring forest degradation: first, where detection is indicated by a change in canopy cover or proxies, and second, the quantification of loss (or gain) in above ground biomass (AGB). The discussion only considers degradation that has a visible impact on the forest canopy and is thus detectable by remote sensing. The first approach encompasses methods that characterise the type of degradation and track disturbance, detect gaps in, and fragmentation of, the forest canopy, and proxies that provide evidence of forestry activity. Progress in these topics has seen the extension of methods to higher resolution (both spatial and temporal) data to better capture the disturbance signal, distinguish degraded and intact forest, and monitor regrowth. Improvements in the reliability of mapping methods are anticipated by SAR-optical data fusion and use of very high resolution data. The second approach exploits EO sensors with known sensitivity to forest structure and biomass and discusses monitoring efforts using repeat LiDAR and SAR data. There has been progress in the capacity to discriminate forest age and growth stage using data fusion methods and LiDAR height metrics. Interferometric SAR and LiDAR have found new application in linking forest structure change to degradation in tropical forests. Estimates of AGB change have been demonstrated at national level using SAR and LiDAR-assisted approaches. Future improvements are anticipated with the availability of next generation LiDAR sensors. Improved access to relevant satellite data and best available methods are key to operational forest degradation monitoring. Countries will need to prioritise their monitoring efforts depending on the significance of the degradation, balanced against available resources. A better understanding of the drivers and impacts of degradation will help guide monitoring and restoration efforts. Ultimately we want to restore ecosystem service and function in degraded forests before the change is irreversible.

Determining the size of a complete disturbance landscape: multi-scale, continental analysis of forest change

The scale of investigation for disturbance-influenced processes plays a critical role in theoretical assumptions about stability, variance, and equilibrium, as well as conservation reserve and long-term monitoring program design. Critical consideration of scale is required for robust planning designs, especially when anticipating future disturbances whose exact locations are unknown. This research quantified disturbance proportion and pattern (as contagion) at multiple scales across North America. This pattern of scale-associated variability can guide selection of study and management extents, for example, to minimize variance (measured as standard deviation) between any landscapes within an ecoregion. We identified the proportion and pattern of forest disturbance (30 m grain size) across multiple landscape extents up to 180 km². We explored the variance in proportion of disturbed area and the pattern of that disturbance between landscapes (within an ecoregion) as a function of the landscape extent. In many ecoregions, variance between landscapes within an ecoregion was minimal at broad landscape extents (low standard deviation). Gap-dominated regions showed the least variance, while fire-dominated showed the largest. Intensively managed ecoregions displayed unique patterns. A majority of the ecoregions showed low variance between landscapes at some scale, indicating an appropriate extent for incorporating natural regimes and unknown future disturbances was identified. The quantification of the scales of disturbance at the ecoregion level provides guidance for individuals interested in anticipating future disturbances which will occur in unknown spatial locations. Information on the extents required to incorporate disturbance patterns into planning is crucial for that process.

Stand structure, recruitment and growth dynamics in mixed subalpine spruce and Swiss stone pine forests in the Eastern Carpathians

Natural subalpine forests are considered to be sensitive to climate change, and forest characteristics are assumed to reflect the prevalent disturbance regime. We hypothesize that stand history determines different stand structures. Based on large full inventory datasets (including tree biometric data, spatial coordinates, tree age, and basal area increment) we assessed the size structure, tree recruitment dynamics and radial growth patterns in three permanent plots along an altitudinal gradient in a mixed coniferous forest (Picea abies and Pinus cembra) in the Eastern Carpathians. Both discrete disturbances (large scale or small scale) and chronic disturbances (climate change) were identified as drivers of stand structure development in the studied plots. A stand replacing wind disturbance generated a unimodal bell-shaped size and age distribution for both species characterized by a sharp increase in post-disturbance recruitment. By contrast, small-scale wind-caused gaps led to a negative exponential diameter distribution for spruce and a left-asymmetric unimodal for pine. Climate-driven infilling processes in the upper subalpine forest were reflected as J-shaped size and age distributions for both species, but with pine predating spruce. The growth patterns for both species demonstrated an increased basal area increment since the early 1900s, with an emphasis in the last few decades, irrespective of stand history. Pine demonstrated a competitive advantage compared to spruce due to the higher growth rate and size at the same age. Recognition of combined discrete and chronic disturbances as drivers of the tree layer characteristics in a subalpine coniferous forest is essential in both stand history analyses and growth predictions.

Effects of Long-Term Anthropogenic Disturbance on the Benthic Episammic Diatom Community of an Ancient, Tropical Lake

Habitat homogenization, nutrient enrichment and loss of biodiversity are broadly recognized as the consequences of human activity in aquatic systems. Diatoms (Bacillariophyceae) are frequently used in aquatic environmental assessment and impact monitoring, but in unique habitats dominated by endemic taxa, traditional approaches may not be appropriate. We examined the impacts of long term anthropogenic impacts upon the littoral episammic diatom community around the town of Soroako, located on Lake Matano, an ancient tropical lake. Lake Matano is located on central Sulawesi Island, Indonesia, and socio-economic conditions are typical of developing nations. Although differences in nutrient concentrations were undetectable with field-based spectroscopy approaches, mean Shannon diversity was decreased in association with proximity the town-site. However, mean ß-diversity was maintained despite several decades of shoreline modification at Soroako. Elevated abundances of early-successional diatom taxa in the disturbed area drove differences between areas immediately offshore of Soroako and those farther away. These findings suggest that increased physical disturbance and TSS loads around Soroako, rather than increased nutrient loading, influenced shifts in the diatom community. These results suggest that microscopy-based biomonitoring approaches are sensitive indicators of environmental modification that could be useful in areas where access to cutting-edge analytical equipment is limited.

Effect of copper on multiple successional stages of a marine fouling assemblage

Copper based paints are used to prevent fouling on the hulls of ships. The widely documented effect of copper on hull assemblages may be primarily due to direct effects on the invertebrates themselves or indirect effects from copper absorbed into the microbial biofilm before settlement has commenced. Artificial units of habitat were exposed to varied regimes of copper to examine (1) the photosynthetic efficiency and pigments of early-colonising biofilms, and (2) subsequent macroinvertebrate assemblage change in response to the different regimes of copper. Macroinvertebrate assemblages were found to be less sensitive to the direct effects of copper than indirect effects as delivered through biofilms that have been historically exposed to copper, with some species more tolerant than others. This raises further concern for the efficacy of copper as a universal antifoulant on the hulls of ships, which may continue to assist the invasion of copper-tolerant invertebrate species.

Rodent herbivory differentially affects mortality rates of 14 native plant species with contrasting life history and growth form traits

Ecosystems are transformed by changes in disturbance regimes including wildfire and herbivory. Rodent consumers can have strong top-down effects on plant community assembly through seed predation, but their impacts on post-germination seedling establishment via seedling herbivory need better characterization, particularly in deserts. To test the legacy effects of fire history, and native rodent consumers on seedling establishment, we evaluated factorial combinations of experimental exclusion of rodents and fire history (burned vs. unburned) on seedling survival of 14 native plant species that vary in their life history strategies and growth form in the Mojave Desert. Seedlings were placed into the experimental plots, and seedling survival was monitored daily for 8 days. The legacy effects of fire history had minimal effects on seedling survival, but rodent exclusion, year, and their interaction were strongly significant. Seedling survival rates were nearly sixfold greater in rodent exclusion plots compared to control plots in 2012 (53 vs. 9%) and 17-fold greater in 2013 (17 vs. 1%). The dramatic increase in seedling mortality from 2012 to 2013 was likely driven by an increase in rodent abundance and an outbreak of grasshoppers that appears to have intensified the rodent effect. There was strong variability in plant species survival in response to rodent herbivory with annual plants and forb species showing lower survival than perennial plants and shrub species. These results indicate that rodent consumers can strongly regulate seedling survival of native plant species with potentially strong regulatory effects on plant community development.

Landscape, Climate and Hantavirus Cardiopulmonary Syndrome Outbreaks

We performed a literature review in order to improve our understanding of how landscape and climate drivers affect HCPS outbreaks. Anthropogenic landscape changes such as forest loss, fragmentation and agricultural land uses are related with a boost in hantavirus reservoir species abundance and hantavirus prevalence in tropical areas, increasing HCPS risk. Additionally, higher precipitation, especially in arid regions, favors an increase in vegetational biomass, which augments the resources for reservoir rodents, also increasing HCPS risk. Although these relationships were observed, few studies described it so far, and the ones that did it are concentrated in few places. To guide future research on this issue, we build a conceptual model relating landscape and climate variables with HCPS outbreaks and identified research opportunities. We point out the need for studies addressing the effects of landscape configuration, temperature and the interaction between climate and landscape variables. Critical landscape thresholds are also highly relevant, once HCPS risk transmission can increase rapidly above a certain degree of landscape degradation. These studies could be relevant to implement preventive measures, creating landscapes that can mitigate disease spread risk.

Clonal integration increases tolerance of a phalanx clonal plant to defoliation

Defoliation by herbivores commonly imposes negative effects on plants, and physiological integration (resource sharing) can enhance the ability of guerilla clonal plants to tolerate stresses. Here we examined whether physiological integration can increase the ability of phalanx clonal plants to withstand defoliation. On a high mountain grassland in southwestern China, we subjected the phalanx clonal plant Iris delavayi within 10cm×10cm plots to three levels of defoliation intensity, i.e., control (no defoliation), moderate (50% shoot removal to simulate moderate herbivory) and heavy defoliation (100% shoot removal to simulate heavy herbivory), and kept rhizomes at the plot edges connected (allowing physiological integration) or disconnected (preventing integration) with intact ramets outside the plots. Defoliation significantly reduced leaf biomass, root biomass and ramet number of I. delavayi. Clonal integration did not affect the growth of I. delavayi under control, but significantly increased total biomass, rhizome and root biomass under heavy defoliation, and leaf biomass and ramet number under moderate defoliation. We conclude that clonal integration associated with resource reallocation plays an important role in maintaining the productivity of the alpine and subalpine grassland ecosystems in SW China where clonal plants are a dominant component of the grasslands and are commonly extensively managed with moderate grazing intensity. Our results also help to better understand the adaption and tolerance of phalanx clonal plants subjected to long-term grazing in the high mountain environment.

Assessing the impacts of bait collection on inter-tidal sediment and the associated macrofaunal and bird communities: The importance of appropriate spatial scales

Bait collection is a multibillion dollar worldwide activity that is often managed ineffectively. For managers to understand the impacts on protected inter-tidal mudflats and waders at appropriate spatial scales macrofaunal surveys combined with video recordings of birds and bait collectors were undertaken at two UK sites. Dug sediment constituted approximately 8% of the surveyed area at both sites and is less muddy (lower organic content) than undug sediment. This may have significant implications for turbidity. Differences in the macrofaunal community between dug and undug areas if the same shore height is compared as well as changes in the dispersion of the community occurred at one site. Collection also induces a 'temporary loss of habitat' for some birds as bait collector numbers negatively correlate with wader and gull abundance. Bait collection changes the coherence and ecological structure of inter-tidal mudflats as well as directly affecting wading birds. However, as β diversity increased we suggest that management at appropriate hectare/site scales could maximise biodiversity/function whilst still supporting collection.

Macrofaunal community structure in Bahía Concepción (Chile) before and after the 8.8 Mw Maule mega-earthquake and tsunami

Faunal assemblages of subtidal sedimentary environments are key components of coastal ecosystems. Benthic communities inhabiting the coastal zone near urban centers in Concepción Bay (Chile) have been described as highly disturbed (i.e. impoverished in diversity and species richness). This is due to the frequent presence of hypoxic conditions at the bottom due to the intrusion of low oxygen Equatorial Subsurface Water, high natural productivity and the high load of organic matter generated by several anthropogenic activities. A mega-earthquake (8.8 Mw) and subsequent tsunami occurred on the coast of south-central Chile on February 27, 2010 (27F), heavily impacting Concepción Bay, which is located 30 km south of the epicenter. The objectives of the present study are: (i) to evaluate the effect produced by the mega-earthquake and tsunami on the benthic community, and (ii) to assess dissimilarity in macrofauna composition and abundance in Concepción Bay at an inter-decadal time scale based on a comparison between our sampling conducted between 2010 and 2013 and information published since 1969. Our results show that the benthic macrofauna of Concepción Bay was disturbed by the 27F (i.e. high community dissimilarity in 2010). Changes in community structure were observed at an inter-annual scale (i.e. diminished community dissimilarity in 2013), suggesting a recovery post-27F. At an inter-decadal scale, community structure post-27F was dissimilar to the structure described for the 1980's and 1990's but more similar to that reported for 1969. The reducing conditions of the sediments due to the high input of organic matter that took place in the 1980's and 1990's may explain this dissimilarity.

Resilience of benthic deep-sea fauna to mining activities

With increasing demand for mineral resources, extraction of polymetallic sulphides at hydrothermal vents, cobalt-rich ferromanganese crusts at seamounts, and polymetallic nodules on abyssal plains may be imminent. Here, we shortly introduce ecosystem characteristics of mining areas, report on recent mining developments, and identify potential stress and disturbances created by mining. We analyze species' potential resistance to future mining and perform meta-analyses on population density and diversity recovery after disturbances most similar to mining: volcanic eruptions at vents, fisheries on seamounts, and experiments that mimic nodule mining on abyssal plains. We report wide variation in recovery rates among taxa, size, and mobility of fauna. While densities and diversities of some taxa can recover to or even exceed pre-disturbance levels, community composition remains affected after decades. The loss of hard substrata or alteration of substrata composition may cause substantial community shifts that persist over geological timescales at mined sites.

Defining Disturbance for Microbial Ecology

Disturbance can profoundly modify the structure of natural communities. However, microbial ecologists' concept of "disturbance" has often deviated from conventional practice. Definitions (or implicit usage) have frequently included climate change and other forms of chronic environmental stress, which contradict the macrobiologist's notion of disturbance as a discrete event that removes biomass. Physical constraints and disparate biological characteristics were compared to ask whether disturbances fundamentally differ in microbial and macroorganismal communities. A definition of "disturbance" for microbial ecologists is proposed that distinguishes from "stress" and other competing terms, and that is in accord with definitions accepted by plant and animal ecologists.

Frequency and Management of Sleep Disturbance in Adults with Atopic Dermatitis: A Systematic Review

Introduction

Intense nocturnal pruritus as well as the complex pathophysiology of atopic dermatitis (AD) can severely affect sleep and become a major factor in negatively impacting quality of life in adults. However, much of the literature on sleep disturbance in AD patients is on the pediatric population, and it is not well studied in adults. Furthermore, limited studies are available to guide effective management of sleep disturbance in AD in general. We review the literature to present the studies that have investigated the relationship between AD and its effect on sleep in adults and provide an approach for clinicians caring for this population.

Methods

A systematic literature search was conducted through the PubMed and EMBASE databases using the search terms “atopic dermatitis” OR “eczema” AND “sleep.” The articles generated by the search and their references were reviewed.

Results

A high prevalence of sleep disturbance is experienced by adults with AD. The likelihood of sleep disturbance is much higher in patients with AD compared to those without AD. Sleep disturbance appears to worsen with AD severity. Pruritus and scratching appear to be large contributors to sleep disturbance in adult patients with AD.

Conclusion

It is important that clinicians evaluate the severity of AD and ask general questions about itching, sleep, impact on daily activities, and persistence of disease during each patient visit and follow-up with the complaint of sleep disturbance. Management of sleep disturbance in AD should focus on adequate disease control of AD as well as possible medical interventions to help improve sleep. The pathophysiology of sleep disturbance in AD is extremely complex, and further research is needed to better understand the interplay of the immune system, circadian rhythm, and environmental factors implicated in both AD and sleep.

The nocturnal acoustical intensity of the intensive care environment: an observational study

Background

The intensive care unit (ICU) environment exposes patients to noise levels that may result in substantial sleep disruption. There is a need to accurately describe the intensity pattern and source of noise in the ICU in order to develop effective sound abatement strategies. The objectives of this study were to determine nocturnal noise levels and their variability and the related sources of noise within an Australian tertiary ICU.

Methods

An observational cross-sectional study was conducted in a 24-bed open-plan ICU. Sound levels were recorded overnight during three nights at 5-s epochs using Extech (SDL 600) sound monitors. Noise sources were concurrently logged by two research assistants.

Results

The mean recorded ambient noise level in the ICU was 52.85 decibels (dB) (standard deviation (SD) 5.89), with a maximum noise recording at 98.3 dB (A). All recorded measurements exceeded the WHO recommendations. Noise variability per minute ranged from 9.9 to 44 dB (A), with peak noise levels >70 dB (A) occurring 10 times/hour (SD 11.4). Staff were identified as the most common source accounting for 35% of all noise. Mean noise levels in single-patient rooms compared with open-bed areas were 53.5 vs 53 dB (p = 0.37), respectively.

Conclusion

Mean noise levels exceeded those recommended by the WHO resulting in an acoustical intensity of 193 times greater than the recommended and demonstrated a high degree of unpredictable variability, with the primary noise sources coming from staff conversations. The lack of protective effects of single rooms and the contributing effects that staffs have on noise levels are important factors when considering sound abatement strategies.

Electronic supplementary material

The online version of this article (doi:10.1186/s40560-017-0237-9) contains supplementary material, which is available to authorized users.

How Networks of Informal Trails Cause Landscape Level Damage to Vegetation

When visitors are not constrained to remain on formal trails, informal trail networks can develop and damage plant communities in protected areas. These networks can form in areas with low growing vegetation, where formal trails are limited, where there is limited regulation and where vegetation is slow to recover once disturbed. To demonstrate the extent of impacts from unregulated recreational use, we assessed damage to alpine vegetation by hikers and pack animals in the highest protected area in the southern Hemisphere: Aconcagua Park, in the Andes. Within the 237 ha area surveyed in the Horcones Valley, over 19 km of trails were found, nearly all of which (94%) were informal. This network of trails resulted in the direct loss of 11.5 ha of vegetation and extensive fragmentation of alpine meadows (21 fragments) and steppe vegetation (68 fragments). When levels of disturbance off these trails were quantified using rapid visual assessments, 81% of 102 randomly located plots showed evidence of disturbance, with the severity of disturbance greatest close to trails. As a result, vegetation in 90% of the Valley has been damaged by visitor use, nearly all of it from unregulated use. These results highlight the extent to which informal trails and trampling off-trail can cause landscape damage to areas of high conservation value, and hence the importance of better regulation of visitor use. The methodology used for off-trail impact assessment can be easily applied or adapted for other popular protected areas where trampling off-trail is also an issue.

Plant species richness sustains higher trophic levels of soil nematode communities after consecutive environmental perturbations

The magnitude and frequency of extreme weather events are predicted to increase in the future due to ongoing climate change. In particular, floods and droughts resulting from climate change are thought to alter the ecosystem functions and stability. However, knowledge of the effects of these weather events on soil fauna is scarce, although they are key towards functioning of terrestrial ecosystems. Plant species richness has been shown to affect the stability of ecosystem functions and food webs. Here, we used the occurrence of a natural flood in a biodiversity grassland experiment that was followed by a simulated summer drought experiment, to investigate the interactive effects of plant species richness, a natural flood, and a subsequent summer drought on nematode communities. Three and five months after the natural flooding, effects of flooding severity were still detectable in the belowground system. We found that flooding severity decreased soil nematode food-web structure (loss of K-strategists) and the abundance of plant feeding nematodes. However, high plant species richness maintained higher diversity and abundance of higher trophic levels compared to monocultures throughout the flood. The subsequent summer drought seemed to be of lower importance but reversed negative flooding effects in some cases. This probably occurred because the studied grassland system is well adapted to drought, or because drought conditions alleviated the negative impact of long-term soil waterlogging. Using soil nematodes as indicator taxa, this study suggests that high plant species richness can maintain soil food web complexity after consecutive environmental perturbations.

Gamebird responses to anthropogenic forest fragmentation and degradation in a southern Amazonian landscape

Although large-bodied tropical forest birds are impacted by both habitat loss and fragmentation, their patterns of habitat occupancy will also depend on the degree of forest habitat disturbance, which may interact synergistically or additively with fragmentation effects. Here, we examine the effects of forest patch and landscape metrics, and levels of forest disturbance on the patterns of persistence of six gamebird taxa in the southern Brazilian Amazon. We use both interview data conducted with long-term residents and/or landowners from 129 remnant forest patches and 15 continuous forest sites and line-transect census data from a subset of 21 forest patches and two continuous forests. Forest patch area was the strongest predictor of species persistence, explaining as much as 46% of the overall variation in gamebird species richness. Logistic regression models showed that anthropogenic disturbance—including surface wildfires, selective logging and hunting pressure—had a variety of effects on species persistence. Most large-bodied gamebird species were sensitive to forest fragmentation, occupying primarily large, high-quality forest patches in higher abundances, and were typically absent from patches <100 ha. Our findings highlight the importance of large (>10,000 ha), relatively undisturbed forest patches to both maximize persistence and maintain baseline abundances of large neotropical forest birds.

THE DYNAMICS OF TWO HYBRID ZONES IN APPALACHIAN SALAMANDERS OF THE GENUS PLETHODON

Two zones of intergradation between populations of Plethodon have been studied for 18 and 20 years, respectively. The data consist of systematic scores of colors, made at least twice annually. Near Heintooga Overlook in the Balsam Mountains (Great Smoky Mountains National Park), the salamanders' cheeks are gray. Proceeding north toward the Smokies, there is increasing frequency and intensity of red color at two, four, and six miles. There has been no change in the scores at any location. The width of the zone and our failure to detect any change can be explained by assuming neutrality of the character and random diffusion during the probable time since contact between the two intergrading forms, which most likely took place after the Hypsithermal Interval, 8,000-5,000 BP. At Coweeta Hydrologic Laboratory in the Nantahala Mountains, Plethodon jordani and P. glutinosus hybridize at intermediate elevations. The lateral white spots of glutinosus decrease and the red on the legs of jordani increases with elevation from 685 m to 1,052 m. At the higher elevation, the proportion of animals scored as "pure" jordani declined significantly from 1974 to 1990, an indication that the hybrid zone is spreading upward. The rate of spread is too great to be explained by random diffusion, so selection for glutinosus characters is the best explanation. The rate of spread of the hybrid zone indicates that hybridization began 60-65 years ago, at the end of the time of intense timbering. Such human disturbances have caused hybridization in other organisms.

Transience after disturbance: Obligate species recovery dynamics depend on disturbance duration

After a disturbance event, population recovery becomes an important species response that drives ecosystem dynamics. Yet, it is unclear how interspecific interactions impact species recovery from a disturbance and which role the disturbance duration (pulse or press) plays. Here, we analytically derive conditions that govern the transient recovery dynamics from disturbance of a host and its obligately dependent partner in a two-species metapopulation model. We find that, after disturbance, species recovery dynamics depend on the species' role (i.e. host or obligately dependent species) as well as the duration of disturbance. Host recovery starts immediately after the disturbance. In contrast, for obligate species, recovery depends on disturbance duration. After press disturbance, which allows dynamics to equilibrate during disturbance, obligate species immediately start to recover. Yet, after pulse disturbance, obligate species continue declining although their hosts have already begun to increase. Effectively, obligate species recovery is delayed until a necessary host threshold occupancy is reached. Obligates' delayed recovery arises solely from interspecific interactions independent of dispersal limitations, which contests previous explanations. Delayed recovery exerts a two-fold negative effect, because populations continue declining to even smaller population sizes and the phase of increased risk from demographic stochastic extinction in small populations is prolonged. We argue that delayed recovery and its determinants -species interactions and disturbance duration - have to be considered in biodiversity management.

Habitat fragmentation has some impacts on aspects of ecosystem functioning in a sub-tropical seagrass bed

Habitat fragmentation impacts ecosystem functioning in many ways, including reducing the availability of suitable habitat for animals and altering resource dynamics. Fragmentation in seagrass ecosystems caused by propeller scarring is a major source of habitat loss, but little is known about how scars impact ecosystem functioning. Propeller scars were simulated in seagrass beds of Abaco, Bahamas, to explore potential impacts. To determine if plant-herbivore interactions were altered by fragmentation, amphipod grazers were excluded from half the experimental plots, and epiphyte biomass and community composition were compared between grazer control and exclusion plots. We found a shift from light limitation to phosphorus limitation at seagrass patch edges. Fragmentation did not impact top-down control on epiphyte biomass or community composition, despite reduced amphipod density in fragmented habitats. Seagrass and amphipod responses to propeller scarring suggest that severely scarred seagrass beds could be subject to changes in internal nutrient stores and amphipod distribution.

The two facets of species sensitivity: Stress and disturbance on coralligenous assemblages in space and time

Marine coastal ecosystems are affected by a vast array of human-induced disturbances and stresses, which are often capable of overwhelming the effects of natural changes. Despite the conceptual and practical difficulty in differentiating between disturbance and stress, which are often used interchangeably, the two terms bear different ecological meanings. Both are external agents, but the former causes mortality or physical damage (subtraction of biomass), whereas the latter causes physiological alteration (reduction in productivity). Sensitivity of marine organisms may thus have a dual connotation, being influenced in different ways by disturbance and by stress following major environmental change. Coralligenous assemblages, which shape unique biogenic formations in the Mediterranean Sea, are considered highly sensitive to change. In this paper, we propose a method to differentiate between disturbance and stress to assess the ecological status of the coralligenous assemblages. Disturbance sensitivity level (DSL) and stress sensitivity level (SSL) of the sessile organisms thriving in the coralligenous assemblages were combined into the integrated sensitivity level of coralligenous assemblages (ISLA) index. Changes in the coralligenous status were assessed in space, along a gradient of stress (human-induced pressures) at several sites of the western Mediterranean, and in time, from a long-term series (1961-2008) at Mesco Reef (Ligurian Sea) that encompasses a mass mortality event in the 1990s. The quality of the coralligenous assemblages was lower in highly urbanised sites than that in sites in both marine protected areas and areas with low levels of urbanisation; moreover, the quality of the assemblages at Mesco Reef decreased during the last 50years. Reduction in quality was mainly due to the increase in stress-tolerant and/or opportunist species (e.g. algal turfs, hydroids and encrusting sponges), the disappearance of the most sensitive macroalgae (e.g. Udoteaceae and erect Rhodophyta) and macro-invertebrates (e.g. Savalia savaglia, Alcyonium coralloides and Smittina cervicornis), and the appearance of invasive alien algal species. Although the specific indices of SSL or DSL well illustrated the changes in the spatial or temporal datasets, respectively, their integration in the ISLA index was more effective in measuring the change experienced by the coralligenous assemblages in both space and time.

Assessing the resilience of Norway spruce forests through a model-based reanalysis of thinning trials

As a result of a rapidly changing climate the resilience of forests is an increasingly important property for ecosystem management. Recent efforts have improved the theoretical understanding of resilience, yet its operational quantification remains challenging. Furthermore, there is growing awareness that resilience is not only a means to addressing the consequences of climate change but is also affected by it, necessitating a better understanding of the climate sensitivity of resilience. Quantifying current and future resilience is thus an important step towards mainstreaming resilience thinking into ecosystem management. Here, we present a novel approach for quantifying forest resilience from thinning trials, and assess the climate sensitivity of resilience using process-based ecosystem modeling. We reinterpret the wide range of removal intensities and frequencies in thinning trials as an experimental gradient of perturbation, and estimate resilience as the recovery rate after perturbation. Our specific objectives were (i) to determine how resilience varies with stand and site conditions, (ii) to assess the climate sensitivity of resilience across a range of potential future climate scenarios, and (iii) to evaluate the robustness of resilience estimates to different focal indicators and assessment methodologies. We analyzed three long-term thinning trials in Norway spruce (Picea abies (L.) Karst.) forests across an elevation gradient in Austria, evaluating and applying the individual-based process model iLand. The resilience of Norway spruce was highest at the montane site, and decreased at lower elevations. Resilience also decreased with increasing stand age and basal area. The effects of climate change were strongly context-dependent: At the montane site, where precipitation levels were ample even under climate change, warming increased resilience in all scenarios. At lower elevations, however, rising temperatures decreased resilience, particularly at precipitation levels below 750-800 mm. Our results were largely robust to different focal variables and resilience definitions. Based on our findings management can improve the capacity to recover from partial disturbances by avoiding overmature and overstocked conditions. At increasingly water limited sites a strongly decreasing resilience of Norway spruce will require a shift towards tree species better adapted to the expected future conditions.

Forecasting Urban Forest Ecosystem Structure, Function, and Vulnerability

The benefits derived from urban forest ecosystems are garnering increasing attention in ecological research and municipal planning. However, because of their location in heterogeneous and highly-altered urban landscapes, urban forests are vulnerable and commonly suffer disproportionate and varying levels of stress and disturbance. The objective of this study is to assess and analyze the spatial and temporal changes, and potential vulnerability, of the urban forest resource in Toronto, Canada. This research was conducted using a spatially-explicit, indicator-based assessment of vulnerability and i-Tree Forecast modeling of temporal changes in forest structure and function. Nine scenarios were simulated for 45 years and model output was analyzed at the ecosystem and municipal scale. Substantial mismatches in ecological processes between spatial scales were found, which can translate into unanticipated loss of function and social inequities if not accounted for in planning and management. At the municipal scale, the effects of Asian longhorned beetle and ice storm disturbance were far less influential on structure and function than changes in management actions. The strategic goals of removing invasive species and increasing tree planting resulted in a decline in carbon storage and leaf biomass. Introducing vulnerability parameters in the modeling increased the spatial heterogeneity in structure and function while expanding the disparities of resident access to ecosystem services. There was often a variable and uncertain relationship between vulnerability and ecosystem structure and function. Vulnerability assessment and analysis can provide strategic planning initiatives with valuable insight into the processes of structural and functional change resulting from management intervention.

Larval outbreaks in West Greenland: Instant and subsequent effects on tundra ecosystem productivity and CO2 exchange

Insect outbreaks can have important consequences for tundra ecosystems. In this study, we synthesise available information on outbreaks of larvae of the noctuid moth Eurois occulta in Greenland. Based on an extensive dataset from a monitoring programme in Kobbefjord, West Greenland, we demonstrate effects of a larval outbreak in 2011 on vegetation productivity and CO₂ exchange. We estimate a decreased carbon (C) sink strength in the order of 118-143 g C m^-2, corresponding to 1210-1470 tonnes C at the Kobbefjord catchment scale. The decreased C sink was, however, counteracted the following years by increased primary production, probably facilitated by the larval outbreak increasing nutrient turnover rates. Furthermore, we demonstrate for the first time in tundra ecosystems, the potential for using remote sensing to detect and map insect outbreak events.

Application of a statistical model for the assessment of environmental quality in neotropical semi-arid reservoirs

The aim of this study was to develop a statistical model to assess the environmental quality of reservoirs located in semi-arid region using metrics of anthropogenic disturbance, water quality variables, and benthic macroinvertebrate communities as indicators. The proposed model was applied to 60 sites located in three reservoirs in the Paraíba river basin, Brazilian semi-arid region. Collections were made in December 2011. In each site, we collected one sample of benthic macroinvertebrates and one water sample for the determination of physical and chemical parameters. Characterization of the landscape was made through application of 10 physical habitat protocols on each site for the collected information on disturbance and subsequent calculation of disturbance metrics. The results showed the formation of two groups: group 1, consisting of 16 minimally altered sites, and group 2, with 44 severely altered sites. The proposed statistical model was sensitive enough to detect changes. In the minimally altered group, the Chironomids Aedokritus and Fissimentum were dominant, indicating a higher environmental quality, while Coelotanypus and Chironomus were abundant in severely altered sites with lower environmental quality. The conservation and management of reservoirs in semi-arid regions should be intensified in view of the need to maintain the environmental quality of these ecosystems.

Nutrient leaching, soil pH and changes in microbial community increase with time in lead-contaminated boreal forest soil at a shooting range area

Despite the known toxicity of lead (Pb), Pb pellets are widely used at shotgun shooting ranges over the world. However, the impacts of Pb on soil nutrients and soil microbes, playing a crucial role in nutrient cycling, are poorly understood. Furthermore, it is unknown whether these impacts change with time after the cessation of shooting. To shed light on these issues, three study sites in the same coniferous forest in a shooting range area were studied: an uncontaminated control site and an active and an abandoned shooting range, both sharing a similar Pb pellet load in the soil, but the latter with a 20-year longer contamination history. Soil pH and nitrate concentration increased, whilst soil phosphate concentration and fungal phospholipid fatty acid (PLFA) decreased due to Pb contamination. Our results imply that shooting-derived Pb can influence soil nutrients and microbes not only directly but also indirectly by increasing soil pH. However, these mechanisms cannot be differentiated here. Many of the Pb-induced changes were most pronounced at the abandoned range, and nutrient leaching was increased only at that site. These results suggest that Pb disturbs the structure and functions of the soil system and impairs a crucial ecosystem service, the ability to retain nutrients. Furthermore, the risks of shooting-derived Pb to the environment increase with time.

A slow opportunist: physiological and growth responses of an obligate understory plant to patch cut harvesting

Understory light environments change rapidly following timber harvest, and while many understory species utilize and benefit from the additional light, this response is not ubiquitous in shade-obligate species. I examined the effects of patch cut timber harvest on the physiology and growth of an obligate forest understory species to determine if disturbances via timber harvest are physiological stressors or whether such disturbances provide physiological benefits and growth increases in understory species. Forest canopy structure, along with photosynthesis, respiration, water use efficiency, stomatal conductance, and growth rates of American ginseng were quantified one summer before and two summers after patch cut timber harvest. Survival following timber harvest was lower than that observed at undisturbed populations; however, growth of survivors increased post-harvesting, with growth increasing as a function of canopy openness. Light response curves as well as photosynthesis and respiration rates indicated that plants were not well acclimated to higher light levels in the growing season after timber harvest, but rather to two growing seasons after harvest. Relative growth rate formed a positive linear relationship with maximum photosynthesis following timber harvest. My study suggests that ginseng is a "slow opportunist", because while it benefits from sudden light increases, acclimation lags at least one growing season behind canopy changes. American ginseng is surprisingly resilient in the face of a discrete environmental shift and may benefit from forest management strategies that mimic the natural disturbance regimes common in mature forests throughout its range.

Floristic and vegetation successional processes within landslides in a Mediterranean environment

Floristic and vegetation analysis in seven Mediterranean landslides led to the understanding of the successional processes occurring in different landslide disturbed sectors. Our study showed that in landslides that occurred between 1996 and 2010 there is a clear differentiation between the three main landslide sectors (scarp, main body and foot) concerning floristic composition, vegetation structure, floristic richness, successional processes and plant functional type. Additional differences were found between landslide areas and undisturbed agricultural areas adjacent to landslides. In this study 48 floristic relevés were made using a stratified random sampling design. The main landslide body exhibits the highest floristic richness whereas the landslide scarp has the lowest coverage rate and the highest presence of characteristic species from ruderal and strongly perturbed habitats. Finally, the landslide foot shows a late stage in the succession (maquis or pre-forest stage) with a high dominance of vines. We further discuss the importance of landslides as reservoirs of biodiversity especially for Mediterranean orchids.

Arthropod communities in a selenium-contaminated habitat with a focus on ant species

The selenium contamination event that occurred at Kesterson Reservoir (Merced Co., CA) during the 1970-80s is a frequently cited example for the negative effects of contamination on wildlife. Despite the importance of arthropods for ecosystem services and functioning, relatively little information is available as to the impacts of pollution on arthropod community dynamics. We conducted surveys of the arthropod community present at Kesterson Reservoir to assess the impacts of selenium contamination on arthropod diversity, with a focus on ant species richness, composition and density. Trophic groups were compared to determine which arthropods were potentially receiving the greatest selenium exposure. Plant samples were analyzed to determine the selenium content by site and by location within plant. Soil concentrations varied across the study sites, but not across habitat types. Topsoil contained higher levels of selenium compared to core samples. Plants contained similar concentrations of selenium in their leaves, stems and flowers, but flowers contained the greatest range of concentrations. Individuals within the detritivores/decomposers and predators accumulated the greatest concentrations of selenium, whereas nectarivores contained the lowest concentrations. Species composition differed across the sites: Dorymyrmex bicolor was located only at the site containing the greatest soil selenium concentration, but Solenopsis xyloni was found at most sites and was predominant at six of the sites. Selenium concentrations in ants varied by species and collection sites. Nest density was also found to differ across sites, but was not related to soil selenium or any of the habitat variables measured in our study. Selenium was not found to impact species richness, but was a significant variable for the occurrence of two out of the eight native species identified.

Adaptive Capacity in Community Forest Management: A Systematic Review of Studies in East Asia

This study investigated the indicators of adaptive capacity along with disturbances in community forest management systems in the East Asian countries, China, Japan and South Korea. Although these countries have centuries-old traditions of community-based forest management, they have been less researched in light of adaptive capacity for resilient social-ecological systems. Recent social and ecological disturbances bring about new challenges and/or opportunities to the capacity of forest related communities to adapt to rapidly changing conditions. Through a systematic review of the community forestry and related adaptive capacity literature in three East Asian countries, this study addressed the role of diverse knowledge systems, such as traditional and Western scientific knowledge, and civic traditions of self-organization in local communities that characterized adaptive capacity of this region. This study extends our understanding of community-based conservation efforts and traditions of this region, and adds to the understandings gleaned from studies of community forestry in the West and sacred forests in other parts of Asia and Africa. Further research on ways to increase adaptive capacity is needed in a site-specific context.

Intensive ground vegetation growth mitigates the carbon loss after forest disturbance

AIMS

Slow or failed tree regeneration after forest disturbance is increasingly observed in the central European Alps, potentially amplifying the carbon (C) loss from disturbance. We aimed at quantifying C dynamics of a poorly regenerating disturbance site with a special focus on the role of non-woody ground vegetation.

METHODS

Soil CO₂ efflux, fine root biomass, ground vegetation biomass, tree increment and litter input were assessed in (i) an undisturbed section of a ~ 110 years old Norway spruce stand, (ii) in a disturbed section which was clear-cut six years ago (no tree regeneration), and (iii) in a disturbed section which was clear-cut three years ago (no tree regeneration).

RESULTS

Total soil CO₂ efflux was similar across all stand sections (8.5 ± 0.2 to 8.9 ± 0.3 t C ha^-1 yr.^-1). The undisturbed forest served as atmospheric C sink (2.1 t C ha^-1 yr.^-1), whereas both clearings were C sources to the atmosphere. The source strength three years after disturbance (-5.5 t C ha^-1 yr.^-1) was almost twice as high as six years after disturbance (-2.9 t C ha^-1 yr.^-1), with declining heterotrophic soil respiration and the high productivity of dense graminoid ground vegetation mitigating C loss.

CONCLUSIONS

C loss after disturbance decreases with time and ground vegetation growth. Dense non-woody ground vegetation cover can hamper tree regeneration but simultaneously decrease the ecosystem C loss. The role of ground vegetation should be more explicitly taken into account in forest C budgets assessing disturbance effects.

Anthropogenic impacts in protected areas: assessing the efficiency of conservation efforts using Mediterranean ant communities

In countries with high levels of urbanization, protected areas are often subject to human disturbance. In addition to dealing with fragmentation, land managers also have to confront the loss of characteristic ecosystems due to biotic homogenization, which is the increasing similarity of species assemblages among geographically separate regions. Using ants as a model system, we explored whether anthropogenic factors negatively affect biodiversity of protected areas of a regional network. We first analysed the effect of fragmentation and human activity on ant biodiversity within protected areas. Secondly, we tested whether homogenization could occur among protected areas. We sampled 79 plots in the most common habitats of 32 protected areas in southern Spain and calculated ant community richness and diversity indices, endemic richness, and Bray–Curtis similarity indices (between pairs of plots). We related these indices with patch fragmentation and human disturbance variables, taking into account environmental, spatial and landscape covariates. We used ANOSIM to test for differences between similarity indices, specifically among levels of anthropogenic disturbance. Species richness was positively correlated with the distance from the border of the protected areas and the number of endemic species was negatively correlated with the degree of fragmentation. Ant communities were similar within each protected area but differed across regions. Human disturbance was not correlated with community similarity among sampling points. Our approach suggests how the ability of European protected areas to sustain biodiversity is limited because they remain susceptible to anthropogenic impacts. Although ant communities maintained their biological distinctiveness, we reveal how fragmentation within protected areas is important for community richness and endemism maintenance.

Attribution of net carbon change by disturbance type across forest lands of the conterminous United States

BACKGROUND

Locating terrestrial sources and sinks of carbon (C) will be critical to developing strategies that contribute to the climate change mitigation goals of the Paris Agreement. Here we present spatially resolved estimates of net C change across United States (US) forest lands between 2006 and 2010 and attribute them to natural and anthropogenic processes.

RESULTS

Forests in the conterminous US sequestered -460 ± 48 Tg C year^-1, while C losses from disturbance averaged 191 ± 10 Tg C year^-1. Combining estimates of net C losses and gains results in net carbon change of -269 ± 49 Tg C year^-1. New forests gained -8 ± 1 Tg C year^-1, while deforestation resulted in losses of 6 ± 1 Tg C year^-1. Forest land remaining forest land lost 185 ± 10 Tg C year^-1 to various disturbances; these losses were compensated by net carbon gains of -452 ± 48 Tg C year^-1. C loss in the southern US was highest (105 ± 6 Tg C year^-1) with the highest fractional contributions from harvest (92%) and wind (5%). C loss in the western US (44 ± 3 Tg C year^-1) was due predominantly to harvest (66%), fire (15%), and insect damage (13%). The northern US had the lowest C loss (41 ± 2 Tg C year^-1) with the most significant proportional contributions from harvest (86%), insect damage (9%), and conversion (3%). Taken together, these disturbances reduced the estimated potential C sink of US forests by 42%.

CONCLUSION

The framework presented here allows for the integration of ground and space observations to more fully inform US forest C policy and monitoring efforts.

Attribution of net carbon change by disturbance type across forest lands of the conterminous United States

BACKGROUND

Locating terrestrial sources and sinks of carbon (C) will be critical to developing strategies that contribute to the climate change mitigation goals of the Paris Agreement. Here we present spatially resolved estimates of net C change across United States (US) forest lands between 2006 and 2010 and attribute them to natural and anthropogenic processes.

RESULTS

Forests in the conterminous US sequestered -460 ± 48 Tg C year^-1, while C losses from disturbance averaged 191 ± 10 Tg C year^-1. Combining estimates of net C losses and gains results in net carbon change of -269 ± 49 Tg C year^-1. New forests gained -8 ± 1 Tg C year^-1, while deforestation resulted in losses of 6 ± 1 Tg C year^-1. Forest land remaining forest land lost 185 ± 10 Tg C year^-1 to various disturbances; these losses were compensated by net carbon gains of -452 ± 48 Tg C year^-1. C loss in the southern US was highest (105 ± 6 Tg C year^-1) with the highest fractional contributions from harvest (92%) and wind (5%). C loss in the western US (44 ± 3 Tg C year^-1) was due predominantly to harvest (66%), fire (15%), and insect damage (13%). The northern US had the lowest C loss (41 ± 2 Tg C year^-1) with the most significant proportional contributions from harvest (86%), insect damage (9%), and conversion (3%). Taken together, these disturbances reduced the estimated potential C sink of US forests by 42%.

CONCLUSION

The framework presented here allows for the integration of ground and space observations to more fully inform US forest C policy and monitoring efforts.

Changes in the fish assemblages of a coastal lagoon subjected to gradual salinity increases

This study analyses fish data to understand how the gradual increase of salinity registered in a coastal lagoon and consequently, anthropogenic disturbance, affected the fish communities. For that, fish assemblages of the Ria de Aveiro were sampled monthly in 3 years from different decades (1988, 1997 and 2012). Dominant species were Atherina boyeri, A. presbyter, Sardina pilchardus, Dicentrarchus labrax, Liza aurata and L. ramada. Significant differences in fish communities were detected among years in both terms of density and biomass. Results pointed out to a taxonomic and functional homogenization of fish assemblages in 2012, when salinity was higher and its range of variation across the whole lagoon more uniform. Marine species were clearly associated with 2012, while some freshwater species only appeared in 1988, reflecting the gradual salinity increase in the lagoon. Overall, both the structure and function of fish assemblages of Ria de Aveiro have changed over the time, which was attributed to human activities to maintain the lagoon operational.

Hybrid controller with observer for the estimation and rejection of disturbances

In this paper, a hybrid controller with observer is introduced for the estimation and rejection of a disturbance. It is based on the combination of the sliding mode technique and the output feedback strategy. It is divided into two designs: (1) the observer and (2) the controller with observer. The observer is selected to reach two objectives: (a) to assure its stability and (b) for the estimation of a disturbance. The controller with observer is selected to reach three objectives: (a) to assure its stability, (b) for the rejection of a disturbance, and (c) for the decreasing of chattering in the sliding mode behavior. The proposed method is applied for the estimation and rejection of the disturbance in a plotter and a suspension system.

Does regional diversity recover after disturbance? A field experiment in constructed ponds

The effects of disturbance on local species diversity have been well documented, but less recognized is the possibility that disturbances can alter diversity at regional spatial scales. Since regional diversity can dictate which species are available for recolonization of degraded sites, the loss of diversity at regional scales may impede the recovery of biodiversity following a disturbance. To examine this we used a chemical disturbance of rotenone, a piscicide commonly used for fish removal in aquatic habitats, on small fishless freshwater ponds. We focused on the non-target effects of rotenone on aquatic invertebrates with the goal of assessing biodiversity loss and recovery at both local (within-pond) and regional (across ponds) spatial scales. We found that rotenone caused significant, large, but short-term losses of species at both local and regional spatial scales. Using a null model of random extinction, we determined that species were selectively removed from communities relative to what would be expected if species loss occurred randomly. Despite this selective loss of biodiversity, species diversity at both local and regional spatial scales recovered to reference levels one year after the addition of rotenone. The rapid recovery of local and regional diversity in this study was surprising considering the large loss of regional species diversity, however many aquatic invertebrates disperse readily or have resting stages that may persist through disturbances. We emphasize the importance of considering spatial scale when quantifying the impacts of a disturbance on an ecosystem, as well as considering how regional species loss can influence recovery from disturbance.

Deer herbivory reduces web-building spider abundance by simplifying forest vegetation structure

Indirect ecological effects are a common feature of ecological systems, arising when one species affects interactions among two or more other species. We examined how browsing by white-tailed deer (Odocoileus virginianus) indirectly affected the abundance and composition of a web-building spider guild through their effects on the structure of the ground and shrub layers of northern hardwood forests. We examined paired plots consisting of deer-free and control plots in the Allegheny Plateau region Pennsylvania and Northern Highlands region of Wisconsin. We recorded the abundance of seven types of webs, each corresponding to a family of web-building spiders. We quantified vegetation structure and habitat suitability for the spiders by computing a web scaffold availability index (WSAI) at 0.5 m and 1.0 m above the ground. At Northern Highlands sites, we recorded prey availability. Spider webs were twice as abundant in deer-free plots compared to control plots, while WSAI was 7–12 times greater in deerfree plots. Prey availability was lower in deer-free plots. With the exception of funnel web-builders, all spider web types were significantly more abundant in deer-free plots. Both deer exclusion and the geographic region of plots were significant predictors of spider community structure. In closed canopy forests with high browsing pressure, the low density of tree saplings and shrubs provides few locations for web-building spiders to anchor webs. Recruitment of these spiders may become coupled with forest disturbance events that increase tree and shrub recruitment. By modifying habitat structure, deer appear to indirectly modify arthropod food web interactions. As deer populations have increased in eastern North America over the past several decades, the effects of deer on web-building spiders may be widespread.

Plant Host and Geographic Location Drive Endophyte Community Composition in the Face of Perturbation

All plants form symbioses with endophytic fungi, which affect host plant health and function. Most endophytic fungi are horizontally transmitted, and consequently, local environment and geographic location greatly influence endophyte community composition. Growing evidence also suggests that identity of the plant host (e.g., species, genotype) can be important in shaping endophyte communities. However, little is known about how disturbances to plants affect their fungal symbiont communities. The goal of this study was to test if disturbances, from both natural and anthropogenic sources, can alter endophyte communities independent of geographic location or plant host identity. Using the plant species white snakeroot (Ageratina altissima; Asteraceae), we conducted two experiments that tested the effect of perturbation on endophyte communities. First, we examined endophyte response to leaf mining insect activity, a natural perturbation, in three replicate populations. Second, for one population, we applied fungicide to plant leaves to test endophyte community response to an anthropogenic perturbation. Using culture-based methods and Sanger sequencing of fungal isolates, we then examined abundance, diversity, and community structure of endophytic fungi in leaves subjected to perturbations by leaf mining and fungicide application. Our results show that plant host individual and geographic location are the major determinants of endophyte community composition even in the face of perturbations. Unexpectedly, we found that leaf mining did not impact endophyte communities in white snakeroot, but fungicide treatment resulted in small but significant changes in endophyte community structure. Together, our results suggest that endophyte communities are highly resistant to biotic and anthropogenic disturbances.

Land cover changes associated with recent energy development in the Williston Basin; Northern Great Plains, USA

The Williston Basin in the Northern Great Plains has experienced rapid energy development since 2000. To evaluate the land cover changes resulting from recent (2000-2015) development, the area and previous land cover of all well pads (pads) constructed during this time were determined, the amount of disturbed and reclaimed land adjacent to pads was estimated, land cover changes were analyzed over time for three different well types, and the effects from future development were predicted. The previous land cover of the 12,990ha converted to pads was predominately agricultural (49.5%) or prairie (47.4%) with lesser amounts of developed (2.3%), aquatic (0.5%), and forest (0.4%). Additionally, 12,121ha has likely been disturbed and reclaimed. The area required per gas well remained constant through time while the land required per oil well increased initially and then decreased as development first shifted from conventional to unconventional drilling and then to multi-bore pads. For non-oil-and-gas wells (i.e. stratigraphic test wells, water wells, and injection wells), the area per well increased through time likely due to increased produced water disposal requirements. Future land cover change is expected to be 2.7 times greater than recent development with much of the development occurring in five counties in the core Bakken development area. Direct land cover change and disturbance from recent and expected development are predicted to affect 0.4% of the landscape across the basin; however, in the core Bakken development area, 2.3% of the landscape will be affected including 2.1% of the remaining grassland. Although future development will result in significant land cover change, evolving industry practices and proactive siting decisions, such as development along energy corridors and placing pads in areas previously altered by human activity, have the potential to reduce the ecological effects of future energy development in the Williston Basin.

Long-term underwater sound measurements in the shipping noise indicator bands 63Hz and 125Hz from the port of Falmouth Bay, UK

Chronic low-frequency anthropogenic sound, such as shipping noise, may be negatively affecting marine life. The EU's Marine Strategy Framework Directive (MSFD) includes a specific indicator focused on this noise. This indicator is the yearly average sound level in third-octave bands with centre frequencies at 63Hz and 125Hz. These levels are described for Falmouth Bay, UK, an active port at the entrance to the English Channel. Underwater sound was recorded for 30min h(-1) over the period June 2012 to November 2013 for a total of 435days. Mean third-octave levels were louder in the 125-Hz band (annual mean level of 96.0dB re 1μPa) than in the 63-Hz band (92.6dB re 1 μPa). These levels and variations are assessed as a function of seasons, shipping activity and wave height, providing comparison points for future monitoring activities, including the MSFD and emerging international regulation.

A limited legacy effect of copper in marine biofilms

The effects of confounding by temporal factors remains understudied in pollution ecology. For example, there is little understanding of how disturbance history affects the development of assemblages. To begin addressing this gap in knowledge, marine biofilms were subjected to temporally-variable regimes of copper exposure and depuration. It was expected that the physical and biological structure of the biofilms would vary in response to copper regime. Biofilms were examined by inductively coupled plasma optical emission spectrometry, chlorophyll-a fluorescence and field spectrometry and it was found that (1) concentrations of copper were higher in those biofilms exposed to copper, (2) concentrations of copper remain high in biofilms after the source of copper is removed, and (3) exposure to and depuration from copper might have comparable effects on the photosynthetic microbial assemblages in biofilms. The persistence of copper in biofilms after depuration reinforces the need for consideration of temporal factors in ecology.

Phytoplankton responses to temperature increases are constrained by abiotic conditions and community composition

Effects of temperature changes on phytoplankton communities seem to be highly context-specific, but few studies have analyzed whether this context specificity depends on differences in the abiotic conditions or in species composition between studies. We present an experiment that allows disentangling the contribution of abiotic and biotic differences in shaping the response to two aspects of temperature change: permanent increase of mean temperature versus pulse disturbance in form of a heat wave. We used natural communities from six different sites of a floodplain system as well as artificially mixed communities from laboratory cultures and grew both, artificial and natural communities, in water from the six different floodplain lakes (sites). All 12 contexts (2 communities × 6 sites) were first exposed to three different temperature levels (12, 18, 24 °C, respectively) and afterward to temperature pulses (4 °C increase for 7 h day(-1)). Temperature-dependent changes in biomass and community composition depended on the initial composition of phytoplankton communities. Abiotic conditions had a major effect on biomass of phytoplankton communities exposed to different temperature conditions, however, the effect of biotic and abiotic conditions together was even more pronounced. Additionally, phytoplankton community responses to pulse temperature effects depended on the warming history. By disentangling abiotic and biotic effects, our study shows that temperature-dependent effects on phytoplankton communities depend on both, biotic and abiotic constraints.

Assessment the short-term effects of wrack removal on supralittoral arthropods using the M-BACI design on Atlantic sandy beaches of Brazil and Spain

Wrack removal has been adopted indiscriminately, with no previous assessment of the ecological implications for sandy beach ecosystem. This study evaluated, through an M-BACI design, the effect of wrack removal on supralittoral arthropods on Atlantic sandy beaches receiving different types of wrack: mangrove propagules (Brazil), seagrasses and macroalgae (Spain). Impacted plots were contrasted with controls in 8 successive periods before and after experimental wrack removal. After the disturbance, drastic decreases in the densities of the amphipod Platorchestia monodi, coleopterans Cleridae, Nitidulidae and Phaleria testacea (Brazilian beaches) and amphipod Talitrus saltator (Spanish beaches) were detected in the impacted plots. The recovery patterns of arthropods might be related to wrack features (amount, composition, and degradation) combined with density and species-specific strategies (e.g. mobility, feeding preferences) in each Atlantic region. The temporary suppression of wrack and its associated fauna can have potential effects on the wrack-derived process and food-web structure on sandy beaches.

The relative importance of vertical soil nutrient heterogeneity, and mean and depth-specific soil nutrient availabilities for tree species richness in tropical forests and woodlands

The relative importance of resource heterogeneity and quantity on plant diversity is an ongoing debate among ecologists, but we have limited knowledge on relationships between tree diversity and heterogeneity in soil nutrient availability in tropical forests. We expected tree species richness to be: (1) positively related to vertical soil nutrient heterogeneity; (2) negatively related to mean soil nutrient availability; and (3) more influenced by nutrient availability in the upper than lower soil horizons. Using a data set from 60, 20 × 40-m plots in a moist forest, and 126 plots in miombo woodlands in Tanzania, we regressed tree species richness against vertical soil nutrient heterogeneity, both depth-specific (0-15, 15-30, and 30-60 cm) and mean soil nutrient availability, and soil physical properties, with elevation and measures of anthropogenic disturbance as co-variables. Overall, vertical soil nutrient heterogeneity was the best predictor of tree species richness in miombo but, contrary to our prediction, the relationships between tree species richness and soil nutrient heterogeneity were negative. In the moist forest, mean soil nutrient availability explained considerable variations in tree species richness, and in line with our expectations, these relationships were mainly negative. Soil nutrient availability in the top soil layer explained more of the variation in tree species richness than that in the middle and lower layers in both vegetation types. Our study shows that vertical soil nutrient heterogeneity and mean availability can influence tree species richness at different magnitudes in intensively utilized tropical vegetation types.