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Fotiadis P, Parkes L, Davis KA, Satterthwaite TD, Shinohara RT, Bassett DS. Structure-function coupling in macroscale human brain networks. Nat Rev Neurosci 2024:10.1038/s41583-024-00846-6. [PMID: 39103609 DOI: 10.1038/s41583-024-00846-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 07/03/2024] [Indexed: 08/07/2024]
Abstract
Precisely how the anatomical structure of the brain gives rise to a repertoire of complex functions remains incompletely understood. A promising manifestation of this mapping from structure to function is the dependency of the functional activity of a brain region on the underlying white matter architecture. Here, we review the literature examining the macroscale coupling between structural and functional connectivity, and we establish how this structure-function coupling (SFC) can provide more information about the underlying workings of the brain than either feature alone. We begin by defining SFC and describing the computational methods used to quantify it. We then review empirical studies that examine the heterogeneous expression of SFC across different brain regions, among individuals, in the context of the cognitive task being performed, and over time, as well as its role in fostering flexible cognition. Last, we investigate how the coupling between structure and function is affected in neurological and psychiatric conditions, and we report how aberrant SFC is associated with disease duration and disease-specific cognitive impairment. By elucidating how the dynamic relationship between the structure and function of the brain is altered in the presence of neurological and psychiatric conditions, we aim to not only further our understanding of their aetiology but also establish SFC as a new and sensitive marker of disease symptomatology and cognitive performance. Overall, this Review collates the current knowledge regarding the regional interdependency between the macroscale structure and function of the human brain in both neurotypical and neuroatypical individuals.
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Affiliation(s)
- Panagiotis Fotiadis
- Department of Neuroscience, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA.
- Department of Bioengineering, University of Pennsylvania, Philadelphia, PA, USA.
- Department of Anaesthesiology, University of Michigan, Ann Arbor, MI, USA.
| | - Linden Parkes
- Department of Bioengineering, University of Pennsylvania, Philadelphia, PA, USA
| | - Kathryn A Davis
- Department of Neurology, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA
| | - Theodore D Satterthwaite
- Department of Psychiatry, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA
- Penn Statistics in Imaging and Visualization Center, Department of Biostatistics, Epidemiology, and Informatics, University of Pennsylvania, Philadelphia, PA, USA
- Center for Biomedical Image Computing & Analytics, University of Pennsylvania, Philadelphia, PA, USA
- Penn Lifespan Informatics and Neuroimaging Center, University of Pennsylvania, Philadelphia, PA, USA
| | - Russell T Shinohara
- Penn Statistics in Imaging and Visualization Center, Department of Biostatistics, Epidemiology, and Informatics, University of Pennsylvania, Philadelphia, PA, USA
- Center for Biomedical Image Computing & Analytics, University of Pennsylvania, Philadelphia, PA, USA
| | - Dani S Bassett
- Department of Bioengineering, University of Pennsylvania, Philadelphia, PA, USA.
- Department of Neurology, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA.
- Department of Psychiatry, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA.
- Department of Electrical & Systems Engineering, University of Pennsylvania, Philadelphia, PA, USA.
- Department of Physics & Astronomy, University of Pennsylvania, Philadelphia, PA, USA.
- Santa Fe Institute, Santa Fe, NM, USA.
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2
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Luppi AI, Singleton SP, Hansen JY, Jamison KW, Bzdok D, Kuceyeski A, Betzel RF, Misic B. Contributions of network structure, chemoarchitecture and diagnostic categories to transitions between cognitive topographies. Nat Biomed Eng 2024:10.1038/s41551-024-01242-2. [PMID: 39103509 DOI: 10.1038/s41551-024-01242-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/21/2023] [Accepted: 07/02/2024] [Indexed: 08/07/2024]
Abstract
The mechanisms linking the brain's network structure to cognitively relevant activation patterns remain largely unknown. Here, by leveraging principles of network control, we show how the architecture of the human connectome shapes transitions between 123 experimentally defined cognitive activation maps (cognitive topographies) from the NeuroSynth meta-analytic database. Specifically, we systematically integrated large-scale multimodal neuroimaging data from functional magnetic resonance imaging, diffusion tractography, cortical morphometry and positron emission tomography to simulate how anatomically guided transitions between cognitive states can be reshaped by neurotransmitter engagement or by changes in cortical thickness. Our model incorporates neurotransmitter-receptor density maps (18 receptors and transporters) and maps of cortical thickness pertaining to a wide range of mental health, neurodegenerative, psychiatric and neurodevelopmental diagnostic categories (17,000 patients and 22,000 controls). The results provide a comprehensive look-up table charting how brain network organization and chemoarchitecture interact to manifest different cognitive topographies, and establish a principled foundation for the systematic identification of ways to promote selective transitions between cognitive topographies.
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Affiliation(s)
- Andrea I Luppi
- Montreal Neurological Institute, McGill University, Montreal, Quebec, Canada.
| | - S Parker Singleton
- Department of Computational Biology, Cornell University, Ithaca, NY, USA
| | - Justine Y Hansen
- Montreal Neurological Institute, McGill University, Montreal, Quebec, Canada
| | - Keith W Jamison
- Department of Computational Biology, Cornell University, Ithaca, NY, USA
| | - Danilo Bzdok
- Montreal Neurological Institute, McGill University, Montreal, Quebec, Canada
- MILA, Quebec Artificial Intelligence Institute, Montreal, Quebec, Canada
| | - Amy Kuceyeski
- Department of Radiology, Weill Cornell Medicine, New York, NY, USA
| | - Richard F Betzel
- Psychological and Brain Sciences, Indiana University, Bloomington, IN, USA
| | - Bratislav Misic
- Montreal Neurological Institute, McGill University, Montreal, Quebec, Canada
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3
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Zhen Y, Yang Y, Zheng Y, Wang X, Liu L, Zheng Z, Zheng H, Tang S. The heritability and structural correlates of resting-state fMRI complexity. Neuroimage 2024; 296:120657. [PMID: 38810892 DOI: 10.1016/j.neuroimage.2024.120657] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/09/2024] [Revised: 05/24/2024] [Accepted: 05/26/2024] [Indexed: 05/31/2024] Open
Abstract
The complexity of fMRI signals quantifies temporal dynamics of spontaneous neural activity, which has been increasingly recognized as providing important insights into cognitive functions and psychiatric disorders. However, its heritability and structural underpinnings are not well understood. Here, we utilize multi-scale sample entropy to extract resting-state fMRI complexity in a large healthy adult sample from the Human Connectome Project. We show that fMRI complexity at multiple time scales is heritable in broad brain regions. Heritability estimates are modest and regionally variable. We relate fMRI complexity to brain structure including surface area, cortical myelination, cortical thickness, subcortical volumes, and total brain volume. We find that surface area is negatively correlated with fine-scale complexity and positively correlated with coarse-scale complexity in most cortical regions, especially the association cortex. Most of these correlations are related to common genetic and environmental effects. We also find positive correlations between cortical myelination and fMRI complexity at fine scales and negative correlations at coarse scales in the prefrontal cortex, lateral temporal lobe, precuneus, lateral parietal cortex, and cingulate cortex, with these correlations mainly attributed to common environmental effects. We detect few significant associations between fMRI complexity and cortical thickness. Despite the non-significant association with total brain volume, fMRI complexity exhibits significant correlations with subcortical volumes in the hippocampus, cerebellum, putamen, and pallidum at certain scales. Collectively, our work establishes the genetic basis and structural correlates of resting-state fMRI complexity across multiple scales, supporting its potential application as an endophenotype for psychiatric disorders.
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Affiliation(s)
- Yi Zhen
- School of Mathematical Sciences, Beihang University, Beijing 100191, China; Key laboratory of Mathematics, Informatics and Behavioral Semantics, Beihang University, Beijing 100191, China
| | - Yaqian Yang
- School of Mathematical Sciences, Beihang University, Beijing 100191, China; Key laboratory of Mathematics, Informatics and Behavioral Semantics, Beihang University, Beijing 100191, China
| | - Yi Zheng
- School of Mathematical Sciences, Beihang University, Beijing 100191, China; Key laboratory of Mathematics, Informatics and Behavioral Semantics, Beihang University, Beijing 100191, China
| | - Xin Wang
- Institute of Artificial Intelligence, Beihang University, Beijing 100191, China; Key laboratory of Mathematics, Informatics and Behavioral Semantics, Beihang University, Beijing 100191, China; Zhongguancun Laboratory, Beijing 100094, China; Beijing Advanced Innovation Center for Future Blockchain and Privacy Computing, Beihang University, Beijing 100191, China; PengCheng Laboratory, Shenzhen 518055, China
| | - Longzhao Liu
- Institute of Artificial Intelligence, Beihang University, Beijing 100191, China; Key laboratory of Mathematics, Informatics and Behavioral Semantics, Beihang University, Beijing 100191, China; Zhongguancun Laboratory, Beijing 100094, China; Beijing Advanced Innovation Center for Future Blockchain and Privacy Computing, Beihang University, Beijing 100191, China; PengCheng Laboratory, Shenzhen 518055, China
| | - Zhiming Zheng
- Institute of Artificial Intelligence, Beihang University, Beijing 100191, China; Key laboratory of Mathematics, Informatics and Behavioral Semantics, Beihang University, Beijing 100191, China; Institute of Medical Artificial Intelligence, Binzhou Medical University, Yantai 264003, China; Zhongguancun Laboratory, Beijing 100094, China; Beijing Advanced Innovation Center for Future Blockchain and Privacy Computing, Beihang University, Beijing 100191, China; PengCheng Laboratory, Shenzhen 518055, China; State Key Lab of Software Development Environment, Beihang University, Beijing 100191, China
| | - Hongwei Zheng
- Beijing Academy of Blockchain and Edge Computing, Beijing 100085, China.
| | - Shaoting Tang
- Institute of Artificial Intelligence, Beihang University, Beijing 100191, China; Key laboratory of Mathematics, Informatics and Behavioral Semantics, Beihang University, Beijing 100191, China; Institute of Medical Artificial Intelligence, Binzhou Medical University, Yantai 264003, China; Zhongguancun Laboratory, Beijing 100094, China; Beijing Advanced Innovation Center for Future Blockchain and Privacy Computing, Beihang University, Beijing 100191, China; PengCheng Laboratory, Shenzhen 518055, China; State Key Lab of Software Development Environment, Beihang University, Beijing 100191, China.
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4
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Parkes L, Kim JZ, Stiso J, Brynildsen JK, Cieslak M, Covitz S, Gur RE, Gur RC, Pasqualetti F, Shinohara RT, Zhou D, Satterthwaite TD, Bassett DS. A network control theory pipeline for studying the dynamics of the structural connectome. Nat Protoc 2024:10.1038/s41596-024-01023-w. [PMID: 39075309 DOI: 10.1038/s41596-024-01023-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/23/2023] [Accepted: 05/16/2024] [Indexed: 07/31/2024]
Abstract
Network control theory (NCT) is a simple and powerful tool for studying how network topology informs and constrains the dynamics of a system. Compared to other structure-function coupling approaches, the strength of NCT lies in its capacity to predict the patterns of external control signals that may alter the dynamics of a system in a desired way. An interesting development for NCT in the neuroscience field is its application to study behavior and mental health symptoms. To date, NCT has been validated to study different aspects of the human structural connectome. NCT outputs can be monitored throughout developmental stages to study the effects of connectome topology on neural dynamics and, separately, to test the coherence of empirical datasets with brain function and stimulation. Here, we provide a comprehensive pipeline for applying NCT to structural connectomes by following two procedures. The main procedure focuses on computing the control energy associated with the transitions between specific neural activity states. The second procedure focuses on computing average controllability, which indexes nodes' general capacity to control the dynamics of the system. We provide recommendations for comparing NCT outputs against null network models, and we further support this approach with a Python-based software package called 'network control theory for python'. The procedures in this protocol are appropriate for users with a background in network neuroscience and experience in dynamical systems theory.
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Affiliation(s)
- Linden Parkes
- Department of Psychiatry, Rutgers University, Piscataway, NJ, USA.
- Department of Bioengineering, University of Pennsylvania, Philadelphia, PA, USA.
- Lifespan Informatics and Neuroimaging Center (PennLINC), Department of Psychiatry, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA.
| | - Jason Z Kim
- Department of Physics, Cornell University, Ithaca, NY, USA
| | - Jennifer Stiso
- Department of Bioengineering, University of Pennsylvania, Philadelphia, PA, USA
| | - Julia K Brynildsen
- Department of Bioengineering, University of Pennsylvania, Philadelphia, PA, USA
| | - Matthew Cieslak
- Lifespan Informatics and Neuroimaging Center (PennLINC), Department of Psychiatry, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA
- Penn/CHOP Lifespan Brain Institute, Perelman School of Medicine, Children's Hospital of Philadelphia Research Institute, Philadelphia, PA, USA
- Department of Psychiatry, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA
| | - Sydney Covitz
- Lifespan Informatics and Neuroimaging Center (PennLINC), Department of Psychiatry, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA
- Penn/CHOP Lifespan Brain Institute, Perelman School of Medicine, Children's Hospital of Philadelphia Research Institute, Philadelphia, PA, USA
- Department of Psychiatry, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA
| | - Raquel E Gur
- Penn/CHOP Lifespan Brain Institute, Perelman School of Medicine, Children's Hospital of Philadelphia Research Institute, Philadelphia, PA, USA
- Department of Psychiatry, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA
| | - Ruben C Gur
- Penn/CHOP Lifespan Brain Institute, Perelman School of Medicine, Children's Hospital of Philadelphia Research Institute, Philadelphia, PA, USA
- Department of Psychiatry, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA
| | - Fabio Pasqualetti
- Department of Mechanical Engineering, University of California, Riverside, Riverside, CA, USA
| | - Russell T Shinohara
- Department of Biostatistics, Epidemiology, and Informatics, Perelman School of Medicine, Philadelphia, PA, USA
- Center for Biomedical Image Computation and Analytics, University of Pennsylvania, Philadelphia, PA, USA
- Penn Statistics in Imaging and Visualization Endeavor (PennSIVE), Center for Clinical Epidemiology and Biostatistics, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA
| | - Dale Zhou
- Department of Bioengineering, University of Pennsylvania, Philadelphia, PA, USA
| | - Theodore D Satterthwaite
- Lifespan Informatics and Neuroimaging Center (PennLINC), Department of Psychiatry, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA
- Penn/CHOP Lifespan Brain Institute, Perelman School of Medicine, Children's Hospital of Philadelphia Research Institute, Philadelphia, PA, USA
- Department of Psychiatry, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA
- Center for Biomedical Image Computation and Analytics, University of Pennsylvania, Philadelphia, PA, USA
| | - Dani S Bassett
- Department of Bioengineering, University of Pennsylvania, Philadelphia, PA, USA
- Department of Psychiatry, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA
- Department of Neurology, Perelman School of Medicine, Philadelphia, PA, USA
- Department of Electrical and Systems Engineering, University of Pennsylvania, Philadelphia, PA, USA
- Department of Physics and Astronomy, University of Pennsylvania, Philadelphia, PA, USA
- Santa Fe Institute, Santa Fe, NM, USA
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5
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Sun Y, Wang P, Zhao K, Chen P, Qu Y, Li Z, Zhong S, Zhou B, Lu J, Zhang X, Wang D, Han Y, Yao H, Liu Y. Structure-function coupling reveals the brain hierarchical structure dysfunction in Alzheimer's disease: A multicenter study. Alzheimers Dement 2024. [PMID: 39072981 DOI: 10.1002/alz.14123] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/03/2024] [Revised: 06/10/2024] [Accepted: 06/13/2024] [Indexed: 07/30/2024]
Abstract
BACKGROUND Alzheimer's disease (AD) is a neurodegenerative condition characterized by cognitive decline. To date, the specific dysfunction in the brain's hierarchical structure in AD remains unclear. METHODS We introduced the structural decoupling index (SDI), based on a multi-site data set comprising functional and diffusion-weighted magnetic resonance imaging data from 793 subjects, to assess their brain hierarchy. RESULTS Compared to normal controls (NCs), individuals with AD exhibited increased SDI within the posterior superior temporal sulcus, insular gyrus, precuneus, hippocampus, amygdala, postcentral gyrus, and cingulate gyrus; meanwhile, the patients with AD demonstrated decreased SDI in the frontal lobe. The SDI in those regions also showed a significant correlation with cognitive ability. Moreover, the SDI was a robust AD neuroimaging biomarker capable of accurately distinguishing diagnostic status (area under the curve [AUC] = 0.86). DISCUSSION Our findings revealed the dysfunction of the brain's hierarchical structure in AD. Furthermore, the SDI could serve as a promising neuroimaging biomarker for AD. HIGHLIGHTS This study utilized multi-center, multi-modal data from East Asian populations. We found an increased spatial gradient of the structure decoupling index (SDI) from sensory-motor to higher-order cognitive regions. Changes in SDI are associated with energy metabolism and mitochondria. SDI can identify Alzheimer's disease (AD) and further uncover the disease mechanisms of AD.
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Affiliation(s)
- Yibao Sun
- Center for Artificial Intelligence in Medical Imaging, School of Artificial Intelligence, Beijing University of Posts and Telecommunications, Beijing, China
| | - Pan Wang
- Department of Neurology, Tianjin Huanhu Hospital, Tianjin, China
| | - Kun Zhao
- Center for Artificial Intelligence in Medical Imaging, School of Artificial Intelligence, Beijing University of Posts and Telecommunications, Beijing, China
| | - Pindong Chen
- School of Artificial Intelligence, University of Chinese Academy of Sciences & Brainnetome Center, Institute of Automation, Chinese Academy of Sciences, Beijing, China
| | - Yida Qu
- School of Artificial Intelligence, University of Chinese Academy of Sciences & Brainnetome Center, Institute of Automation, Chinese Academy of Sciences, Beijing, China
| | - Zhuangzhuang Li
- Center for Artificial Intelligence in Medical Imaging, School of Artificial Intelligence, Beijing University of Posts and Telecommunications, Beijing, China
| | - Suyu Zhong
- Center for Artificial Intelligence in Medical Imaging, School of Artificial Intelligence, Beijing University of Posts and Telecommunications, Beijing, China
| | - Bo Zhou
- Department of Neurology, the Second Medical Centre, National Clinical Research Centre for Geriatric Diseases, Chinese PLA General Hospital, Beijing, China
| | - Jie Lu
- Department of Radiology, Xuanwu Hospital of Capital Medical University, Beijing, China
| | - Xi Zhang
- Department of Neurology, the Second Medical Centre, National Clinical Research Centre for Geriatric Diseases, Chinese PLA General Hospital, Beijing, China
| | - Dawei Wang
- Department of Radiology, School of Public Health, Qilu Hospital of Shandong University & Department of Epidemiology and Health Statistics, Jinan, China
| | - Ying Han
- School of Biomedical Engineering, Hainan University, Haikou, China
- Department of Neurology, Xuanwu Hospital of Capital Medical University, Beijing, China
- National Clinical Research Center for Geriatric Diseases, Beijing, China
| | - Hongxiang Yao
- Department of Radiology, the Second Medical Centre, National Clinical Research Centre for Geriatric Diseases, Chinese PLA General Hospital, Beijing, China
| | - Yong Liu
- Center for Artificial Intelligence in Medical Imaging, School of Artificial Intelligence, Beijing University of Posts and Telecommunications, Beijing, China
- School of Artificial Intelligence, University of Chinese Academy of Sciences & Brainnetome Center, Institute of Automation, Chinese Academy of Sciences, Beijing, China
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6
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Luppi AI, Mediano PAM, Rosas FE, Allanson J, Pickard J, Carhart-Harris RL, Williams GB, Craig MM, Finoia P, Owen AM, Naci L, Menon DK, Bor D, Stamatakis EA. A synergistic workspace for human consciousness revealed by Integrated Information Decomposition. eLife 2024; 12:RP88173. [PMID: 39022924 PMCID: PMC11257694 DOI: 10.7554/elife.88173] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 07/20/2024] Open
Abstract
How is the information-processing architecture of the human brain organised, and how does its organisation support consciousness? Here, we combine network science and a rigorous information-theoretic notion of synergy to delineate a 'synergistic global workspace', comprising gateway regions that gather synergistic information from specialised modules across the human brain. This information is then integrated within the workspace and widely distributed via broadcaster regions. Through functional MRI analysis, we show that gateway regions of the synergistic workspace correspond to the human brain's default mode network, whereas broadcasters coincide with the executive control network. We find that loss of consciousness due to general anaesthesia or disorders of consciousness corresponds to diminished ability of the synergistic workspace to integrate information, which is restored upon recovery. Thus, loss of consciousness coincides with a breakdown of information integration within the synergistic workspace of the human brain. This work contributes to conceptual and empirical reconciliation between two prominent scientific theories of consciousness, the Global Neuronal Workspace and Integrated Information Theory, while also advancing our understanding of how the human brain supports consciousness through the synergistic integration of information.
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Affiliation(s)
- Andrea I Luppi
- Department of Clinical Neurosciences, University of CambridgeCambridgeUnited Kingdom
- University Division of Anaesthesia, School of Clinical Medicine, University of CambridgeCambridgeUnited Kingdom
| | - Pedro AM Mediano
- Department of Psychology, University of CambridgeCambridgeUnited Kingdom
| | - Fernando E Rosas
- Center for Psychedelic Research, Department of Brain Science, Imperial College LondonLondonUnited Kingdom
- Center for Complexity Science, Imperial College LondonLondonUnited Kingdom
- Data Science Institute, Imperial College LondonLondonUnited Kingdom
| | - Judith Allanson
- Department of Clinical Neurosciences, University of CambridgeCambridgeUnited Kingdom
- Department of Neurosciences, Cambridge University Hospitals NHS Foundation, Addenbrooke's HospitalCambridgeUnited Kingdom
| | - John Pickard
- Department of Clinical Neurosciences, University of CambridgeCambridgeUnited Kingdom
- Wolfson Brain Imaging Centre, University of CambridgeCambridgeUnited Kingdom
- Division of Neurosurgery, School of Clinical Medicine, University of Cambridge, Addenbrooke's HospitalCambridgeUnited Kingdom
| | - Robin L Carhart-Harris
- Center for Psychedelic Research, Department of Brain Science, Imperial College LondonLondonUnited Kingdom
- Psychedelics Division - Neuroscape, Department of Neurology, University of CaliforniaSan FranciscoUnited States
| | - Guy B Williams
- Department of Clinical Neurosciences, University of CambridgeCambridgeUnited Kingdom
- Wolfson Brain Imaging Centre, University of CambridgeCambridgeUnited Kingdom
| | - Michael M Craig
- Department of Clinical Neurosciences, University of CambridgeCambridgeUnited Kingdom
- University Division of Anaesthesia, School of Clinical Medicine, University of CambridgeCambridgeUnited Kingdom
| | - Paola Finoia
- Department of Clinical Neurosciences, University of CambridgeCambridgeUnited Kingdom
| | - Adrian M Owen
- Department of Psychology and Department of Physiology and Pharmacology, The Brain and Mind Institute, University of Western OntarioLondonCanada
| | - Lorina Naci
- Trinity College Institute of Neuroscience, School of Psychology, Lloyd Building, Trinity CollegeDublinIreland
| | - David K Menon
- University Division of Anaesthesia, School of Clinical Medicine, University of CambridgeCambridgeUnited Kingdom
- Wolfson Brain Imaging Centre, University of CambridgeCambridgeUnited Kingdom
| | - Daniel Bor
- Department of Psychology, University of CambridgeCambridgeUnited Kingdom
| | - Emmanuel A Stamatakis
- University Division of Anaesthesia, School of Clinical Medicine, University of CambridgeCambridgeUnited Kingdom
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7
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Li J, Jin S, Li Z, Zeng X, Yang Y, Luo Z, Xu X, Cui Z, Liu Y, Wang J. Morphological Brain Networks of White Matter: Mapping, Evaluation, Characterization, and Application. ADVANCED SCIENCE (WEINHEIM, BADEN-WURTTEMBERG, GERMANY) 2024:e2400061. [PMID: 39005232 DOI: 10.1002/advs.202400061] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/03/2024] [Revised: 06/27/2024] [Indexed: 07/16/2024]
Abstract
Although white matter (WM) accounts for nearly half of adult brain, its wiring diagram is largely unknown. Here, an approach is developed to construct WM networks by estimating interregional morphological similarity based on structural magnetic resonance imaging. It is found that morphological WM networks showed nontrivial topology, presented good-to-excellent test-retest reliability, accounted for phenotypic interindividual differences in cognition, and are under genetic control. Through integration with multimodal and multiscale data, it is further showed that morphological WM networks are able to predict the patterns of hamodynamic coherence, metabolic synchronization, gene co-expression, and chemoarchitectonic covariance, and associated with structural connectivity. Moreover, the prediction followed WM functional connectomic hierarchy for the hamodynamic coherence, is related to genes enriched in the forebrain neuron development and differentiation for the gene co-expression, and is associated with serotonergic system-related receptors and transporters for the chemoarchitectonic covariance. Finally, applying this approach to multiple sclerosis and neuromyelitis optica spectrum disorders, it is found that both diseases exhibited morphological dysconnectivity, which are correlated with clinical variables of patients and are able to diagnose and differentiate the diseases. Altogether, these findings indicate that morphological WM networks provide a reliable and biologically meaningful means to explore WM architecture in health and disease.
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Affiliation(s)
- Junle Li
- Institute for Brain Research and Rehabilitation, South China Normal University, Guangzhou, 510631, China
| | - Suhui Jin
- Institute for Brain Research and Rehabilitation, South China Normal University, Guangzhou, 510631, China
| | - Zhen Li
- Institute for Brain Research and Rehabilitation, South China Normal University, Guangzhou, 510631, China
| | - Xiangli Zeng
- Institute for Brain Research and Rehabilitation, South China Normal University, Guangzhou, 510631, China
| | - Yuping Yang
- Institute for Brain Research and Rehabilitation, South China Normal University, Guangzhou, 510631, China
| | - Zhenzhen Luo
- Institute for Brain Research and Rehabilitation, South China Normal University, Guangzhou, 510631, China
| | - Xiaoyu Xu
- State Key Laboratory of Cognitive Neuroscience and Learning, Beijing Normal University, Beijing, 100875, China
- Chinese Institute for Brain Research, Beijing, 102206, China
| | - Zaixu Cui
- Chinese Institute for Brain Research, Beijing, 102206, China
| | - Yaou Liu
- Department of Radiology, Beijing Tiantan Hospital, Beijing, 100070, China
| | - Jinhui Wang
- Institute for Brain Research and Rehabilitation, South China Normal University, Guangzhou, 510631, China
- Key Laboratory of Brain, Cognition and Education Sciences, Ministry of Education, Guangzhou, 510631, China
- Center for Studies of Psychological Application, South China Normal University, Guangzhou, 510631, China
- Guangdong Key Laboratory of Mental Health and Cognitive Science, South China Normal University, Guangzhou, 510631, China
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8
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Wu X, Zhang Y, Xue M, Li J, Li X, Cui Z, Gao JH, Yang G. Heritability of functional gradients in the human subcortico-cortical connectivity. Commun Biol 2024; 7:854. [PMID: 38997510 PMCID: PMC11245549 DOI: 10.1038/s42003-024-06551-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/23/2023] [Accepted: 07/04/2024] [Indexed: 07/14/2024] Open
Abstract
The human subcortex plays a pivotal role in cognition and is widely implicated in the pathophysiology of many psychiatric disorders. However, the heritability of functional gradients based on subcortico-cortical functional connectivity remains elusive. Here, leveraging twin functional MRI (fMRI) data from both the Human Connectome Project (n = 1023) and the Adolescent Brain Cognitive Development study (n = 936) datasets, we construct large-scale subcortical functional gradients and delineate an increased principal functional gradient pattern from unimodal sensory/motor networks to transmodal association networks. We observed that this principal functional gradient is heritable, and the strength of heritability exhibits a heterogeneous pattern along a hierarchical unimodal-transmodal axis in subcortex for both young adults and children. Furthermore, employing a machine learning framework, we show that this heterogeneous pattern of the principal functional gradient in subcortex can accurately discern the relationship between monozygotic twin pairs and dizygotic twin pairs with an accuracy of 76.2% (P < 0.001). The heritability of functional gradients is associated with the anatomical myelin proxied by MRI-derived T1-weighted/T2-weighted (T1w/T2w) ratio mapping in subcortex. This study provides new insights into the biological basis of subcortical functional hierarchy by revealing the structural and genetic properties of the subcortical functional gradients.
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Affiliation(s)
- Xinyu Wu
- Advanced Research Institute of Multidisciplinary Sciences, Beijing Institute of Technology, Beijing, China
| | - Yu Zhang
- Advanced Research Institute of Multidisciplinary Sciences, Beijing Institute of Technology, Beijing, China
| | - Mufan Xue
- Advanced Research Institute of Multidisciplinary Sciences, Beijing Institute of Technology, Beijing, China
| | - Jinlong Li
- School of Computer Science and Technology, Beijing Institute of Technology, Beijing, China
| | - Xuesong Li
- School of Computer Science and Technology, Beijing Institute of Technology, Beijing, China
| | - Zaixu Cui
- Chinese Institute for Brain Research, Beijing, China
| | - Jia-Hong Gao
- Beijing City Key Lab for Medical Physics and Engineering, Institution of Heavy Ion Physics, School of Physics, Peking University, Beijing, China.
- Center for MRI Research, Academy for Advanced Interdisciplinary Studies, Peking University, Beijing, China.
- McGovern Institute for Brain Research, Peking University, Beijing, China.
- Institute of Artificial Intelligence, Hefei Comprehensive National Science Center, Hefei, China.
| | - Guoyuan Yang
- Advanced Research Institute of Multidisciplinary Sciences, Beijing Institute of Technology, Beijing, China.
- School of Medical Technology, Beijing Institute of Technology, Beijing, China.
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9
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Tanner J, Faskowitz J, Teixeira AS, Seguin C, Coletta L, Gozzi A, Mišić B, Betzel RF. A multi-modal, asymmetric, weighted, and signed description of anatomical connectivity. Nat Commun 2024; 15:5865. [PMID: 38997282 PMCID: PMC11245624 DOI: 10.1038/s41467-024-50248-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/08/2023] [Accepted: 07/01/2024] [Indexed: 07/14/2024] Open
Abstract
The macroscale connectome is the network of physical, white-matter tracts between brain areas. The connections are generally weighted and their values interpreted as measures of communication efficacy. In most applications, weights are either assigned based on imaging features-e.g. diffusion parameters-or inferred using statistical models. In reality, the ground-truth weights are unknown, motivating the exploration of alternative edge weighting schemes. Here, we explore a multi-modal, regression-based model that endows reconstructed fiber tracts with directed and signed weights. We find that the model fits observed data well, outperforming a suite of null models. The estimated weights are subject-specific and highly reliable, even when fit using relatively few training samples, and the networks maintain a number of desirable features. In summary, we offer a simple framework for weighting connectome data, demonstrating both its ease of implementation while benchmarking its utility for typical connectome analyses, including graph theoretic modeling and brain-behavior associations.
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Affiliation(s)
- Jacob Tanner
- Cognitive Science Program, Indiana University, Bloomington, IN, USA
- School of Informatics, Computing, and Engineering, Indiana University, Bloomington, IN, USA
| | - Joshua Faskowitz
- Department of Psychological and Brain Sciences, Indiana University, Bloomington, IN, USA
| | - Andreia Sofia Teixeira
- LASIGE, Departamento de Informática, Faculdade de Ciências, Universidade de Lisboa, Lisboa, Portugal
| | - Caio Seguin
- Department of Psychological and Brain Sciences, Indiana University, Bloomington, IN, USA
| | | | - Alessandro Gozzi
- Functional Neuroimaging Lab, Istituto Italiano di Tecnologia, Center for Neuroscience and Cognitive Systems, Rovereto, Italy
| | - Bratislav Mišić
- McConnell Brain Imaging Centre, Montréal Neurological Institute, McGill University, Montréal, Canada
| | - Richard F Betzel
- Cognitive Science Program, Indiana University, Bloomington, IN, USA.
- School of Informatics, Computing, and Engineering, Indiana University, Bloomington, IN, USA.
- Department of Psychological and Brain Sciences, Indiana University, Bloomington, IN, USA.
- Program in Neuroscience, Indiana University, Bloomington, IN, USA.
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10
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Larivière S, Park BY, Royer J, DeKraker J, Ngo A, Sahlas E, Chen J, Rodríguez-Cruces R, Weng Y, Frauscher B, Liu R, Wang Z, Shafiei G, Mišić B, Bernasconi A, Bernasconi N, Fox MD, Zhang Z, Bernhardt BC. Connectome reorganization associated with temporal lobe pathology and its surgical resection. Brain 2024; 147:2483-2495. [PMID: 38701342 PMCID: PMC11224603 DOI: 10.1093/brain/awae141] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/20/2023] [Revised: 03/23/2024] [Accepted: 04/05/2024] [Indexed: 05/05/2024] Open
Abstract
Network neuroscience offers a unique framework to understand the organizational principles of the human brain. Despite recent progress, our understanding of how the brain is modulated by focal lesions remains incomplete. Resection of the temporal lobe is the most effective treatment to control seizures in pharmaco-resistant temporal lobe epilepsy (TLE), making this syndrome a powerful model to study lesional effects on network organization in young and middle-aged adults. Here, we assessed the downstream consequences of a focal lesion and its surgical resection on the brain's structural connectome, and explored how this reorganization relates to clinical variables at the individual patient level. We included adults with pharmaco-resistant TLE (n = 37) who underwent anterior temporal lobectomy between two imaging time points, as well as age- and sex-matched healthy controls who underwent comparable imaging (n = 31). Core to our analysis was the projection of high-dimensional structural connectome data-derived from diffusion MRI tractography from each subject-into lower-dimensional gradients. We then compared connectome gradients in patients relative to controls before surgery, tracked surgically-induced connectome reconfiguration from pre- to postoperative time points, and examined associations to patient-specific clinical and imaging phenotypes. Before surgery, individuals with TLE presented with marked connectome changes in bilateral temporo-parietal regions, reflecting an increased segregation of the ipsilateral anterior temporal lobe from the rest of the brain. Surgery-induced connectome reorganization was localized to this temporo-parietal subnetwork, but primarily involved postoperative integration of contralateral regions with the rest of the brain. Using a partial least-squares analysis, we uncovered a latent clinical imaging signature underlying this pre- to postoperative connectome reorganization, showing that patients who displayed postoperative integration in bilateral fronto-occipital cortices also had greater preoperative ipsilateral hippocampal atrophy, lower seizure frequency and secondarily generalized seizures. Our results bridge the effects of focal brain lesions and their surgical resections with large-scale network reorganization and interindividual clinical variability, thus offering new avenues to examine the fundamental malleability of the human brain.
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Affiliation(s)
- Sara Larivière
- Multimodal Imaging and Connectome Analysis Laboratory, McConnell Brain Imaging Centre, Montreal Neurological Institute and Hospital, McGill University, Montreal, QC H3A 2B4, Canada
- Center for Brain Circuit Therapeutics, Brigham and Women’s Hospital, Harvard University, Boston, MA 02115, USA
| | - Bo-yong Park
- Department of Data Science, Inha University, Incheon 22212, Republic of Korea
- Center for Neuroscience Imaging Research, Institute for Basic Science, Suwon 34126, Republic of Korea
| | - Jessica Royer
- Multimodal Imaging and Connectome Analysis Laboratory, McConnell Brain Imaging Centre, Montreal Neurological Institute and Hospital, McGill University, Montreal, QC H3A 2B4, Canada
| | - Jordan DeKraker
- Multimodal Imaging and Connectome Analysis Laboratory, McConnell Brain Imaging Centre, Montreal Neurological Institute and Hospital, McGill University, Montreal, QC H3A 2B4, Canada
| | - Alexander Ngo
- Multimodal Imaging and Connectome Analysis Laboratory, McConnell Brain Imaging Centre, Montreal Neurological Institute and Hospital, McGill University, Montreal, QC H3A 2B4, Canada
| | - Ella Sahlas
- Multimodal Imaging and Connectome Analysis Laboratory, McConnell Brain Imaging Centre, Montreal Neurological Institute and Hospital, McGill University, Montreal, QC H3A 2B4, Canada
| | - Judy Chen
- Multimodal Imaging and Connectome Analysis Laboratory, McConnell Brain Imaging Centre, Montreal Neurological Institute and Hospital, McGill University, Montreal, QC H3A 2B4, Canada
| | - Raúl Rodríguez-Cruces
- Multimodal Imaging and Connectome Analysis Laboratory, McConnell Brain Imaging Centre, Montreal Neurological Institute and Hospital, McGill University, Montreal, QC H3A 2B4, Canada
| | - Yifei Weng
- Department of Medical Imaging, Jinling Hospital, Nanjing University School of Medicine, Nanjing 210002, China
| | - Birgit Frauscher
- Analytical Neurophysiology Laboratory, Montreal Neurological Institute, McGill University, Montreal, QC H3A 2B4, Canada
| | - Ruoting Liu
- Department of Medical Imaging, Jinling Hospital, Nanjing University School of Medicine, Nanjing 210002, China
| | - Zhengge Wang
- Department of Radiology, Nanjing Drum Tower Hospital, Affiliated Hospital of Nanjing University Medical School, Nanjing 210008, China
| | - Golia Shafiei
- Department of Psychiatry, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA 19104, USA
| | - Bratislav Mišić
- Department of Neurology and Neurosurgery, McConnell Brain Imaging Centre, Montreal Neurological Institute and Hospital, McGill University, Montreal, QC H3A 2B4, Canada
| | - Andrea Bernasconi
- Neuroimaging of Epilepsy Laboratory, McConnell Brain Imaging Centre, Montreal Neurological Institute, McGill University, Montreal, QC H3A 2B4, Canada
| | - Neda Bernasconi
- Neuroimaging of Epilepsy Laboratory, McConnell Brain Imaging Centre, Montreal Neurological Institute, McGill University, Montreal, QC H3A 2B4, Canada
| | - Michael D Fox
- Center for Brain Circuit Therapeutics, Brigham and Women’s Hospital, Harvard University, Boston, MA 02115, USA
| | - Zhiqiang Zhang
- Department of Medical Imaging, Jinling Hospital, Nanjing University School of Medicine, Nanjing 210002, China
| | - Boris C Bernhardt
- Multimodal Imaging and Connectome Analysis Laboratory, McConnell Brain Imaging Centre, Montreal Neurological Institute and Hospital, McGill University, Montreal, QC H3A 2B4, Canada
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11
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Luppi AI, Rosas FE, Mediano PAM, Demertzi A, Menon DK, Stamatakis EA. Unravelling consciousness and brain function through the lens of time, space, and information. Trends Neurosci 2024; 47:551-568. [PMID: 38824075 DOI: 10.1016/j.tins.2024.05.007] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/15/2024] [Revised: 04/29/2024] [Accepted: 05/09/2024] [Indexed: 06/03/2024]
Abstract
Disentangling how cognitive functions emerge from the interplay of brain dynamics and network architecture is among the major challenges that neuroscientists face. Pharmacological and pathological perturbations of consciousness provide a lens to investigate these complex challenges. Here, we review how recent advances about consciousness and the brain's functional organisation have been driven by a common denominator: decomposing brain function into fundamental constituents of time, space, and information. Whereas unconsciousness increases structure-function coupling across scales, psychedelics may decouple brain function from structure. Convergent effects also emerge: anaesthetics, psychedelics, and disorders of consciousness can exhibit similar reconfigurations of the brain's unimodal-transmodal functional axis. Decomposition approaches reveal the potential to translate discoveries across species, with computational modelling providing a path towards mechanistic integration.
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Affiliation(s)
- Andrea I Luppi
- Division of Anaesthesia, University of Cambridge, Cambridge, UK; Department of Clinical Neurosciences, University of Cambridge, Cambridge, UK; Montreal Neurological Institute, McGill University, Montreal, QC, Canada; St John's College, University of Cambridge, Cambridge, UK; Center for Eudaimonia and Human Flourishing, Linacre College, University of Oxford, Oxford, UK.
| | - Fernando E Rosas
- Center for Eudaimonia and Human Flourishing, Linacre College, University of Oxford, Oxford, UK; Department of Informatics, University of Sussex, Brighton, UK; Center for Psychedelic Research, Imperial College London, London, UK
| | | | - Athena Demertzi
- Physiology of Cognition Lab, GIGA-Cyclotron Research Center In Vivo Imaging, University of Liège, Liège 4000, Belgium; Psychology and Neuroscience of Cognition Research Unit, University of Liège, Liège 4000, Belgium; National Fund for Scientific Research (FNRS), Brussels 1000, Belgium
| | - David K Menon
- Division of Anaesthesia, University of Cambridge, Cambridge, UK
| | - Emmanuel A Stamatakis
- Division of Anaesthesia, University of Cambridge, Cambridge, UK; Department of Clinical Neurosciences, University of Cambridge, Cambridge, UK
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12
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Fukushima M, Leibnitz K. Effects of packetization on communication dynamics in brain networks. Netw Neurosci 2024; 8:418-436. [PMID: 38952819 PMCID: PMC11142457 DOI: 10.1162/netn_a_00360] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/01/2023] [Accepted: 01/18/2024] [Indexed: 07/03/2024] Open
Abstract
Computational studies in network neuroscience build models of communication dynamics in the connectome that help us understand the structure-function relationships of the brain. In these models, the dynamics of cortical signal transmission in brain networks are approximated with simple propagation strategies such as random walks and shortest path routing. Furthermore, the signal transmission dynamics in brain networks can be associated with the switching architectures of engineered communication systems (e.g., message switching and packet switching). However, it has been unclear how propagation strategies and switching architectures are related in models of brain network communication. Here, we investigate the effects of the difference between packet switching and message switching (i.e., whether signals are packetized or not) on the transmission completion time of propagation strategies when simulating signal propagation in mammalian brain networks. The results show that packetization in the connectome with hubs increases the time of the random walk strategy and does not change that of the shortest path strategy, but decreases that of more plausible strategies for brain networks that balance between communication speed and information requirements. This finding suggests an advantage of packet-switched communication in the connectome and provides new insights into modeling the communication dynamics in brain networks.
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Affiliation(s)
- Makoto Fukushima
- Graduate School of Advanced Science and Engineering, Hiroshima University, Hiroshima, Japan
| | - Kenji Leibnitz
- Center for Information and Neural Networks, National Institute of Information and Communications Technology, Osaka, Japan
- Graduate School of Information Science and Technology, Osaka University, Osaka, Japan
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13
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Nick Q, Gale DJ, Areshenkoff C, De Brouwer A, Nashed J, Wammes J, Zhu T, Flanagan R, Smallwood J, Gallivan J. Reconfigurations of cortical manifold structure during reward-based motor learning. eLife 2024; 12:RP91928. [PMID: 38916598 PMCID: PMC11198988 DOI: 10.7554/elife.91928] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/26/2024] Open
Abstract
Adaptive motor behavior depends on the coordinated activity of multiple neural systems distributed across the brain. While the role of sensorimotor cortex in motor learning has been well established, how higher-order brain systems interact with sensorimotor cortex to guide learning is less well understood. Using functional MRI, we examined human brain activity during a reward-based motor task where subjects learned to shape their hand trajectories through reinforcement feedback. We projected patterns of cortical and striatal functional connectivity onto a low-dimensional manifold space and examined how regions expanded and contracted along the manifold during learning. During early learning, we found that several sensorimotor areas in the dorsal attention network exhibited increased covariance with areas of the salience/ventral attention network and reduced covariance with areas of the default mode network (DMN). During late learning, these effects reversed, with sensorimotor areas now exhibiting increased covariance with DMN areas. However, areas in posteromedial cortex showed the opposite pattern across learning phases, with its connectivity suggesting a role in coordinating activity across different networks over time. Our results establish the neural changes that support reward-based motor learning and identify distinct transitions in the functional coupling of sensorimotor to transmodal cortex when adapting behavior.
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Affiliation(s)
- Qasem Nick
- Centre for Neuroscience Studies, Queen’s UniversityKingstonCanada
- Department of Psychology, Queen’s UniversityKingstonCanada
| | - Daniel J Gale
- Centre for Neuroscience Studies, Queen’s UniversityKingstonCanada
| | - Corson Areshenkoff
- Centre for Neuroscience Studies, Queen’s UniversityKingstonCanada
- Department of Psychology, Queen’s UniversityKingstonCanada
| | - Anouk De Brouwer
- Centre for Neuroscience Studies, Queen’s UniversityKingstonCanada
| | - Joseph Nashed
- Centre for Neuroscience Studies, Queen’s UniversityKingstonCanada
- Department of Medicine, Queen's UniversityKingstonCanada
| | - Jeffrey Wammes
- Centre for Neuroscience Studies, Queen’s UniversityKingstonCanada
- Department of Psychology, Queen’s UniversityKingstonCanada
| | - Tianyao Zhu
- Centre for Neuroscience Studies, Queen’s UniversityKingstonCanada
| | - Randy Flanagan
- Centre for Neuroscience Studies, Queen’s UniversityKingstonCanada
- Department of Psychology, Queen’s UniversityKingstonCanada
| | - Jonny Smallwood
- Centre for Neuroscience Studies, Queen’s UniversityKingstonCanada
- Department of Psychology, Queen’s UniversityKingstonCanada
| | - Jason Gallivan
- Centre for Neuroscience Studies, Queen’s UniversityKingstonCanada
- Department of Psychology, Queen’s UniversityKingstonCanada
- Department of Biomedical and Molecular Sciences, Queen’s UniversityKingstonCanada
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14
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Taylor NL, Whyte CJ, Munn BR, Chang C, Lizier JT, Leopold DA, Turchi JN, Zaborszky L, Műller EJ, Shine JM. Causal evidence for cholinergic stabilization of attractor landscape dynamics. Cell Rep 2024; 43:114359. [PMID: 38870015 PMCID: PMC11255396 DOI: 10.1016/j.celrep.2024.114359] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/18/2023] [Revised: 04/24/2024] [Accepted: 05/30/2024] [Indexed: 06/15/2024] Open
Abstract
There is substantial evidence that neuromodulatory systems critically influence brain state dynamics; however, most work has been purely descriptive. Here, we quantify, using data combining local inactivation of the basal forebrain with simultaneous measurement of resting-state fMRI activity in the macaque, the causal role of long-range cholinergic input to the stabilization of brain states in the cerebral cortex. Local inactivation of the nucleus basalis of Meynert (nbM) leads to a decrease in the energy barriers required for an fMRI state transition in cortical ongoing activity. Moreover, the inactivation of particular nbM sub-regions predominantly affects information transfer in cortical regions known to receive direct anatomical projections. We demonstrate these results in a simple neurodynamical model of cholinergic impact on neuronal firing rates and slow hyperpolarizing adaptation currents. We conclude that the cholinergic system plays a critical role in stabilizing macroscale brain state dynamics.
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Affiliation(s)
- Natasha L Taylor
- Brain and Mind Centre, The University of Sydney, Sydney, NSW, Australia; Centre for Complex Systems, The University of Sydney, Sydney, NSW, Australia
| | - Christopher J Whyte
- Brain and Mind Centre, The University of Sydney, Sydney, NSW, Australia; Centre for Complex Systems, The University of Sydney, Sydney, NSW, Australia
| | - Brandon R Munn
- Brain and Mind Centre, The University of Sydney, Sydney, NSW, Australia; Centre for Complex Systems, The University of Sydney, Sydney, NSW, Australia
| | - Catie Chang
- Vanderbilt School of Engineering, Vanderbilt University, Nashville, TN, USA
| | - Joseph T Lizier
- Centre for Complex Systems, The University of Sydney, Sydney, NSW, Australia; School of Computer Science, The University of Sydney, Sydney, NSW, Australia
| | - David A Leopold
- Neurophysiology Imaging Facility, National Institute of Mental Health, Washington DC, USA; Laboratory of Neuropsychology, National Institute of Mental Health, Bethesda MD, USA
| | - Janita N Turchi
- Laboratory of Neuropsychology, National Institute of Mental Health, Bethesda MD, USA
| | - Laszlo Zaborszky
- Centre for Molecular & Behavioral Neuroscience, Rutgers, The State University of New Jersey, Newark, NJ, USA
| | - Eli J Műller
- Brain and Mind Centre, The University of Sydney, Sydney, NSW, Australia; Centre for Complex Systems, The University of Sydney, Sydney, NSW, Australia
| | - James M Shine
- Brain and Mind Centre, The University of Sydney, Sydney, NSW, Australia; Centre for Complex Systems, The University of Sydney, Sydney, NSW, Australia.
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15
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Feng G, Wang Y, Huang W, Chen H, Cheng J, Shu N. Spatial and temporal pattern of structure-function coupling of human brain connectome with development. eLife 2024; 13:RP93325. [PMID: 38900563 PMCID: PMC11189631 DOI: 10.7554/elife.93325] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/21/2024] Open
Abstract
Brain structural circuitry shapes a richly patterned functional synchronization, supporting for complex cognitive and behavioural abilities. However, how coupling of structural connectome (SC) and functional connectome (FC) develops and its relationships with cognitive functions and transcriptomic architecture remain unclear. We used multimodal magnetic resonance imaging data from 439 participants aged 5.7-21.9 years to predict functional connectivity by incorporating intracortical and extracortical structural connectivity, characterizing SC-FC coupling. Our findings revealed that SC-FC coupling was strongest in the visual and somatomotor networks, consistent with evolutionary expansion, myelin content, and functional principal gradient. As development progressed, SC-FC coupling exhibited heterogeneous alterations dominated by an increase in cortical regions, broadly distributed across the somatomotor, frontoparietal, dorsal attention, and default mode networks. Moreover, we discovered that SC-FC coupling significantly predicted individual variability in general intelligence, mainly influencing frontoparietal and default mode networks. Finally, our results demonstrated that the heterogeneous development of SC-FC coupling is positively associated with genes in oligodendrocyte-related pathways and negatively associated with astrocyte-related genes. This study offers insight into the maturational principles of SC-FC coupling in typical development.
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Affiliation(s)
- Guozheng Feng
- State Key Laboratory of Cognitive Neuroscience and Learning & IDG/McGovern Institute for Brain Research, Beijing Normal UniversityBeijingChina
- BABRI Centre, Beijing Normal UniversityBeijingChina
- Beijing Key Laboratory of Brain Imaging and Connectomics, Beijing Normal UniversityBeijingChina
| | - Yiwen Wang
- State Key Laboratory of Cognitive Neuroscience and Learning & IDG/McGovern Institute for Brain Research, Beijing Normal UniversityBeijingChina
- BABRI Centre, Beijing Normal UniversityBeijingChina
- Beijing Key Laboratory of Brain Imaging and Connectomics, Beijing Normal UniversityBeijingChina
| | - Weijie Huang
- State Key Laboratory of Cognitive Neuroscience and Learning & IDG/McGovern Institute for Brain Research, Beijing Normal UniversityBeijingChina
- BABRI Centre, Beijing Normal UniversityBeijingChina
- Beijing Key Laboratory of Brain Imaging and Connectomics, Beijing Normal UniversityBeijingChina
| | - Haojie Chen
- State Key Laboratory of Cognitive Neuroscience and Learning & IDG/McGovern Institute for Brain Research, Beijing Normal UniversityBeijingChina
- BABRI Centre, Beijing Normal UniversityBeijingChina
- Beijing Key Laboratory of Brain Imaging and Connectomics, Beijing Normal UniversityBeijingChina
| | - Jian Cheng
- School of Computer Science and Engineering, Beihang UniversityBeijingChina
| | - Ni Shu
- State Key Laboratory of Cognitive Neuroscience and Learning & IDG/McGovern Institute for Brain Research, Beijing Normal UniversityBeijingChina
- BABRI Centre, Beijing Normal UniversityBeijingChina
- Beijing Key Laboratory of Brain Imaging and Connectomics, Beijing Normal UniversityBeijingChina
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16
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Corredor D, Segobin S, Hinault T, Eustache F, Dayan J, Guillery-Girard B, Naveau M. The multiscale topological organization of the functional brain network in adolescent PTSD. Cereb Cortex 2024; 34:bhae246. [PMID: 38864573 PMCID: PMC11167567 DOI: 10.1093/cercor/bhae246] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/04/2024] [Revised: 05/17/2024] [Accepted: 05/18/2024] [Indexed: 06/13/2024] Open
Abstract
The experience of an extremely aversive event can produce enduring deleterious behavioral, and neural consequences, among which posttraumatic stress disorder (PTSD) is a representative example. Although adolescence is a period of great exposure to potentially traumatic events, the effects of trauma during adolescence remain understudied in clinical neuroscience. In this exploratory work, we aim to study the whole-cortex functional organization of 14 adolescents with PTSD using a data-driven method tailored to our population of interest. To do so, we built on the network neuroscience framework and specifically on multilayer (multisubject) community analysis to study the functional connectivity of the brain. We show, across different topological scales (the number of communities composing the cortex), a hyper-colocalization between regions belonging to occipital and pericentral regions and hypo-colocalization in middle temporal, posterior-anterior medial, and frontal cortices in the adolescent PTSD group compared to a nontrauma exposed group of adolescents. These preliminary results raise the question of an altered large-scale cortical organization in adolescent PTSD, opening an interesting line of research for future investigations.
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Affiliation(s)
- David Corredor
- Centre Cyceron, CHU de Caen, Neuropsychologie et Imagerie de la Mémoire Humaine, Normandie Université, UNICAEN, PSL Université Paris, EPHE, INSERM, U1077, Caen 14000, France
| | - Shailendra Segobin
- Centre Cyceron, CHU de Caen, Neuropsychologie et Imagerie de la Mémoire Humaine, Normandie Université, UNICAEN, PSL Université Paris, EPHE, INSERM, U1077, Caen 14000, France
| | - Thomas Hinault
- Centre Cyceron, CHU de Caen, Neuropsychologie et Imagerie de la Mémoire Humaine, Normandie Université, UNICAEN, PSL Université Paris, EPHE, INSERM, U1077, Caen 14000, France
| | - Francis Eustache
- Centre Cyceron, CHU de Caen, Neuropsychologie et Imagerie de la Mémoire Humaine, Normandie Université, UNICAEN, PSL Université Paris, EPHE, INSERM, U1077, Caen 14000, France
| | - Jacques Dayan
- Centre Cyceron, CHU de Caen, Neuropsychologie et Imagerie de la Mémoire Humaine, Normandie Université, UNICAEN, PSL Université Paris, EPHE, INSERM, U1077, Caen 14000, France
- Pôle Hospitalo-Universitaire de Psychiatrie de l’Enfant et de l’Adolescent, Centre Hospitalier Guillaume Régnier, Université Rennes 1, Rennes 35700, France
| | - Bérengère Guillery-Girard
- Centre Cyceron, CHU de Caen, Neuropsychologie et Imagerie de la Mémoire Humaine, Normandie Université, UNICAEN, PSL Université Paris, EPHE, INSERM, U1077, Caen 14000, France
| | - Mikaël Naveau
- UNICAEN, CNRS, INSERM, CEA, UAR3408 CYCERON, Normandie Université, Caen 14000, France
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17
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Zhang Z, Wei W, Wang S, Li M, Li X, Li X, Wang Q, Yu H, Zhang Y, Guo W, Ma X, Zhao L, Deng W, Sham PC, Sun Y, Li T. Dynamic structure-function coupling across three major psychiatric disorders. Psychol Med 2024; 54:1629-1640. [PMID: 38084608 DOI: 10.1017/s0033291723003525] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 05/29/2024]
Abstract
BACKGROUND Convergent evidence has suggested atypical relationships between brain structure and function in major psychiatric disorders, yet how the abnormal patterns coincide and/or differ across different disorders remains largely unknown. Here, we aim to investigate the common and/or unique dynamic structure-function coupling patterns across major depressive disorder (MDD), bipolar disorder (BD), and schizophrenia (SZ). METHODS We quantified the dynamic structure-function coupling in 452 patients with psychiatric disorders (MDD/BD/SZ = 166/168/118) and 205 unaffected controls at three distinct brain network levels, such as global, meso-, and local levels. We also correlated dynamic structure-function coupling with the topological features of functional networks to examine how the structure-function relationship facilitates brain information communication over time. RESULTS The dynamic structure-function coupling is preserved for the three disorders at the global network level. Similar abnormalities in the rich-club organization are found in two distinct functional configuration states at the meso-level and are associated with the disease severity of MDD, BD, and SZ. At the local level, shared and unique alterations are observed in the brain regions involving the visual, cognitive control, and default mode networks. In addition, the relationships between structure-function coupling and the topological features of functional networks are altered in a manner indicative of state specificity. CONCLUSIONS These findings suggest both transdiagnostic and illness-specific alterations in the dynamic structure-function relationship of large-scale brain networks across MDD, BD, and SZ, providing new insights and potential biomarkers into the neurodevelopmental basis underlying the behavioral and cognitive deficits observed in these disorders.
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Affiliation(s)
- Zhe Zhang
- Department of Biomedical Engineering, & Department of Neurobiology, Key Laboratory for Biomedical Engineering of Ministry of Education, Affiliated Mental Health Center & Hangzhou Seventh People's Hospital, Zhejiang University, Hangzhou, China
- School of Physics, Hangzhou Normal University, Hangzhou, China
- Institute of Brain Science, School of Basic Medical Sciences, Hangzhou Normal University, Hangzhou, China
| | - Wei Wei
- Department of Biomedical Engineering, & Department of Neurobiology, Key Laboratory for Biomedical Engineering of Ministry of Education, Affiliated Mental Health Center & Hangzhou Seventh People's Hospital, Zhejiang University, Hangzhou, China
- Translational Psychiatry Research Laboratory, Affiliated Mental Health Center & Hangzhou Seventh People's Hospital, Zhejiang University School of Medicine, Hangzhou, China
- Liangzhu Laboratory, MOE Frontier Science Center for Brain Science and Brain-machine Integration, State Key Laboratory of Brain-machine Intelligence, Zhejiang University, Hangzhou, China
- NHC and CAMS Key Laboratory of Medical Neurobiology, Zhejiang University, Hangzhou, China
| | - Sujie Wang
- Department of Biomedical Engineering, & Department of Neurobiology, Key Laboratory for Biomedical Engineering of Ministry of Education, Affiliated Mental Health Center & Hangzhou Seventh People's Hospital, Zhejiang University, Hangzhou, China
| | - Mingli Li
- Mental Health Center and Psychiatric Laboratory, West China Hospital of Sichuan University, Chengdu, China
| | - Xiaojing Li
- Department of Biomedical Engineering, & Department of Neurobiology, Key Laboratory for Biomedical Engineering of Ministry of Education, Affiliated Mental Health Center & Hangzhou Seventh People's Hospital, Zhejiang University, Hangzhou, China
- Translational Psychiatry Research Laboratory, Affiliated Mental Health Center & Hangzhou Seventh People's Hospital, Zhejiang University School of Medicine, Hangzhou, China
- Liangzhu Laboratory, MOE Frontier Science Center for Brain Science and Brain-machine Integration, State Key Laboratory of Brain-machine Intelligence, Zhejiang University, Hangzhou, China
- NHC and CAMS Key Laboratory of Medical Neurobiology, Zhejiang University, Hangzhou, China
| | - Xiaoyu Li
- Department of Biomedical Engineering, & Department of Neurobiology, Key Laboratory for Biomedical Engineering of Ministry of Education, Affiliated Mental Health Center & Hangzhou Seventh People's Hospital, Zhejiang University, Hangzhou, China
| | - Qiang Wang
- Mental Health Center and Psychiatric Laboratory, West China Hospital of Sichuan University, Chengdu, China
| | - Hua Yu
- Department of Biomedical Engineering, & Department of Neurobiology, Key Laboratory for Biomedical Engineering of Ministry of Education, Affiliated Mental Health Center & Hangzhou Seventh People's Hospital, Zhejiang University, Hangzhou, China
- Translational Psychiatry Research Laboratory, Affiliated Mental Health Center & Hangzhou Seventh People's Hospital, Zhejiang University School of Medicine, Hangzhou, China
- Liangzhu Laboratory, MOE Frontier Science Center for Brain Science and Brain-machine Integration, State Key Laboratory of Brain-machine Intelligence, Zhejiang University, Hangzhou, China
- NHC and CAMS Key Laboratory of Medical Neurobiology, Zhejiang University, Hangzhou, China
| | - Yamin Zhang
- Department of Biomedical Engineering, & Department of Neurobiology, Key Laboratory for Biomedical Engineering of Ministry of Education, Affiliated Mental Health Center & Hangzhou Seventh People's Hospital, Zhejiang University, Hangzhou, China
- Translational Psychiatry Research Laboratory, Affiliated Mental Health Center & Hangzhou Seventh People's Hospital, Zhejiang University School of Medicine, Hangzhou, China
- Liangzhu Laboratory, MOE Frontier Science Center for Brain Science and Brain-machine Integration, State Key Laboratory of Brain-machine Intelligence, Zhejiang University, Hangzhou, China
- NHC and CAMS Key Laboratory of Medical Neurobiology, Zhejiang University, Hangzhou, China
| | - Wanjun Guo
- Department of Biomedical Engineering, & Department of Neurobiology, Key Laboratory for Biomedical Engineering of Ministry of Education, Affiliated Mental Health Center & Hangzhou Seventh People's Hospital, Zhejiang University, Hangzhou, China
- Translational Psychiatry Research Laboratory, Affiliated Mental Health Center & Hangzhou Seventh People's Hospital, Zhejiang University School of Medicine, Hangzhou, China
- Liangzhu Laboratory, MOE Frontier Science Center for Brain Science and Brain-machine Integration, State Key Laboratory of Brain-machine Intelligence, Zhejiang University, Hangzhou, China
- NHC and CAMS Key Laboratory of Medical Neurobiology, Zhejiang University, Hangzhou, China
| | - Xiaohong Ma
- Mental Health Center and Psychiatric Laboratory, West China Hospital of Sichuan University, Chengdu, China
| | - Liansheng Zhao
- Mental Health Center and Psychiatric Laboratory, West China Hospital of Sichuan University, Chengdu, China
| | - Wei Deng
- Department of Biomedical Engineering, & Department of Neurobiology, Key Laboratory for Biomedical Engineering of Ministry of Education, Affiliated Mental Health Center & Hangzhou Seventh People's Hospital, Zhejiang University, Hangzhou, China
- Translational Psychiatry Research Laboratory, Affiliated Mental Health Center & Hangzhou Seventh People's Hospital, Zhejiang University School of Medicine, Hangzhou, China
- Liangzhu Laboratory, MOE Frontier Science Center for Brain Science and Brain-machine Integration, State Key Laboratory of Brain-machine Intelligence, Zhejiang University, Hangzhou, China
- NHC and CAMS Key Laboratory of Medical Neurobiology, Zhejiang University, Hangzhou, China
| | - Pak C Sham
- Department of Psychiatry, Li Ka Shing Faculty of Medicine, The University of Hong Kong, Hong Kong SAR, China
- Centre for PanorOmic Sciences, The University of Hong Kong, Hong Kong SAR, China
- State Key Laboratory of Brain and Cognitive Sciences, The University of Hong Kong, Hong Kong SAR, China
| | - Yu Sun
- Department of Biomedical Engineering, & Department of Neurobiology, Key Laboratory for Biomedical Engineering of Ministry of Education, Affiliated Mental Health Center & Hangzhou Seventh People's Hospital, Zhejiang University, Hangzhou, China
- Department of Neurology, Sir Run Run Shaw Hospital, Zhejiang University School of Medicine, Hangzhou, China
| | - Tao Li
- Department of Biomedical Engineering, & Department of Neurobiology, Key Laboratory for Biomedical Engineering of Ministry of Education, Affiliated Mental Health Center & Hangzhou Seventh People's Hospital, Zhejiang University, Hangzhou, China
- Translational Psychiatry Research Laboratory, Affiliated Mental Health Center & Hangzhou Seventh People's Hospital, Zhejiang University School of Medicine, Hangzhou, China
- Liangzhu Laboratory, MOE Frontier Science Center for Brain Science and Brain-machine Integration, State Key Laboratory of Brain-machine Intelligence, Zhejiang University, Hangzhou, China
- NHC and CAMS Key Laboratory of Medical Neurobiology, Zhejiang University, Hangzhou, China
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18
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Ding Z, Shang T, Ding Z, Yang X, Qi J, Qin X, Chen Y, Lv D, Li T, Ma J, Zhan C, Xiao J, Sun Z, Wang N, Yu Z, Li C, Li P. Two multimodal neuroimaging subtypes of obsessive-compulsive disorder disclosed by semi-supervised machine learning. J Affect Disord 2024; 354:293-301. [PMID: 38494136 DOI: 10.1016/j.jad.2024.03.011] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 06/24/2023] [Revised: 02/25/2024] [Accepted: 03/04/2024] [Indexed: 03/19/2024]
Abstract
BACKGROUND Obsessive-compulsive disorder (OCD) is a highly heterogeneous mental condition with a diverse symptom. Existing studies classified OCD on the basis of conventional phenomenology-based taxonomy ignoring the fact that the same subtype identified in accordance with clinical symptom may have different mechanisms and treatment responses. METHODS This research involved 50 medicine-free patients with OCD and 50 matched healthy controls (HCs). All the participants were subjected to structural and functional magnetic resonance imaging (MRI). Voxel-based morphometry (VBM) and amplitude of low frequency fluctuation (ALFF) were used to evaluate gray matter volume (GMV) and spontaneous neuronal activities at rest respectively. Similarity network fusion (SNF) was utilized to integrate GMVs and spontaneous neuronal activities, and heterogeneity by discriminant analysis was applied to characterise OCD subtypes. RESULTS Two OCD subtypes were identified: Subtype 1 exhibited decreased GMVs (i.e., left inferior temporal gyrus, right supplementary motor area and right lingual gyrus) and increased ALFF value (i.e., right orbitofrontal cortex), whereas subtype 2 exhibited increased GMVs (i.e., left cuneus, right precentral gyrus, left postcentral gyrus and left hippocampus) and decreased ALFF value (i.e., right caudate nucleus). Furthermore, the altered GMVs was negatively correlated with abnormal ALFF values in both subtype 1 and 2. LIMITATIONS This study requires further validation via a larger, independent dataset and should consider the potential influences of psychotropic medication on OCD patients' brain activities. CONCLUSIONS Results revealed two reproducible subtypes of OCD based on underlying multimodal neuroimaging and provided new perspectives on the classification of OCD.
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Affiliation(s)
- Zhipeng Ding
- Medical Technology Department, Qiqihar Medical University, Qiqihar, Heilongjiang 161006, China
| | - Tinghuizi Shang
- Department of Psychiatry, Qiqihar Medical University, Qiqihar, Heilongjiang 161006, China
| | - Zhenning Ding
- Medical Technology Department, Qiqihar Medical University, Qiqihar, Heilongjiang 161006, China
| | - Xu Yang
- Medical Technology Department, Qiqihar Medical University, Qiqihar, Heilongjiang 161006, China
| | - Jiale Qi
- Medical Technology Department, Qiqihar Medical University, Qiqihar, Heilongjiang 161006, China
| | - Xiaoqing Qin
- Medical Technology Department, Qiqihar Medical University, Qiqihar, Heilongjiang 161006, China
| | - Yunhui Chen
- Department of Psychiatry, Qiqihar Medical University, Qiqihar, Heilongjiang 161006, China
| | - Dan Lv
- Department of Psychiatry, Qiqihar Medical University, Qiqihar, Heilongjiang 161006, China
| | - Tong Li
- Department of Psychiatry, Qiqihar Medical University, Qiqihar, Heilongjiang 161006, China
| | - Jidong Ma
- Department of Psychiatry, Baiyupao Psychiatric Hospital of Harbin, Harbin, Heilongjiang 150050, China
| | - Chuang Zhan
- Department of Psychiatry, Baiyupao Psychiatric Hospital of Harbin, Harbin, Heilongjiang 150050, China
| | - Jian Xiao
- Department of Psychiatry, Qiqihar Medical University, Qiqihar, Heilongjiang 161006, China
| | - Zhenghai Sun
- Department of Psychiatry, Qiqihar Medical University, Qiqihar, Heilongjiang 161006, China
| | - Na Wang
- Department of Psychiatry, Qiqihar Medical University, Qiqihar, Heilongjiang 161006, China
| | - Zengyan Yu
- Department of Psychiatry, Qiqihar Medical University, Qiqihar, Heilongjiang 161006, China
| | - Chengchong Li
- Department of Psychiatry, Qiqihar Medical University, Qiqihar, Heilongjiang 161006, China.
| | - Ping Li
- Department of Psychiatry, Qiqihar Medical University, Qiqihar, Heilongjiang 161006, China.
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19
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Shain C, Kean H, Casto C, Lipkin B, Affourtit J, Siegelman M, Mollica F, Fedorenko E. Distributed Sensitivity to Syntax and Semantics throughout the Language Network. J Cogn Neurosci 2024; 36:1427-1471. [PMID: 38683732 DOI: 10.1162/jocn_a_02164] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/02/2024]
Abstract
Human language is expressive because it is compositional: The meaning of a sentence (semantics) can be inferred from its structure (syntax). It is commonly believed that language syntax and semantics are processed by distinct brain regions. Here, we revisit this claim using precision fMRI methods to capture separation or overlap of function in the brains of individual participants. Contrary to prior claims, we find distributed sensitivity to both syntax and semantics throughout a broad frontotemporal brain network. Our results join a growing body of evidence for an integrated network for language in the human brain within which internal specialization is primarily a matter of degree rather than kind, in contrast with influential proposals that advocate distinct specialization of different brain areas for different types of linguistic functions.
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Affiliation(s)
| | - Hope Kean
- Massachusetts Institute of Technology
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20
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Smolders L, De Baene W, Rutten GJ, van der Hofstad R, Florack L. Can structure predict function at individual level in the human connectome? Brain Struct Funct 2024; 229:1209-1223. [PMID: 38656375 PMCID: PMC11147846 DOI: 10.1007/s00429-024-02796-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/10/2024] [Accepted: 03/25/2024] [Indexed: 04/26/2024]
Abstract
Several studies predicting Functional Connectivity (FC) from Structural Connectivity (SC) at individual level have been published in recent years, each promising increased performance and utility. We investigated three of these studies, analyzing whether the results truly represent a meaningful individual-level mapping from SC to FC. Using data from the Human Connectome Project shared accross the three studies, we constructed a predictor by averaging FC of training data and analyzed its performance in the same way. In each case, we found that group average FC is an equivalent or better predictor of individual FC than the predictive models in terms of raw prediction performance. Furthermore, we showed that additional analyses performed by the authors of the three studies, in which they attempt to show that their predicted FC has value beyond raw prediction performance, could also be reproduced using the group average FC predictor. This makes it unclear whether any of the three methods represent a meaningful individual-level predictive model. We conclude that either the methods are not appropriate for the data, that the sample size is too small, or that the data does not contain sufficient information to learn a mapping from SC to FC. We advise future individual-level studies to explicitly report results in comparison to the performance of the group average, and carefully demonstrate that their predictions contain meaningful individual-level information. Finally, we believe that investigating alternatives for the construction of SC and FC may improve the chances of developing a meaningful individual-level mapping from SC to FC.
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Affiliation(s)
- Lars Smolders
- Eindhoven University of Technology , Department of Mathematics and Computer Science, PO Box 513, Eindhoven, 5600 MB, Netherlands.
- Elisabeth-TweeSteden Hospital, Department of Neurosurgery, Hilvarenbeekseweg 60, Tilburg, 5022 GC, The Netherlands.
| | - Wouter De Baene
- Tilburg University, Department of Cognitive Neuropsychology, Warandelaan 2, Tilburg, 5000 LE, Netherlands
| | - Geert-Jan Rutten
- Elisabeth-TweeSteden Hospital, Department of Neurosurgery, Hilvarenbeekseweg 60, Tilburg, 5022 GC, The Netherlands
| | - Remco van der Hofstad
- Eindhoven University of Technology , Department of Mathematics and Computer Science, PO Box 513, Eindhoven, 5600 MB, Netherlands
| | - Luc Florack
- Eindhoven University of Technology , Department of Mathematics and Computer Science, PO Box 513, Eindhoven, 5600 MB, Netherlands
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21
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Weinstein SM, Vandekar SN, Li B, Alexander‐Bloch AF, Raznahan A, Li M, Gur RE, Gur RC, Roalf DR, Park MTM, Chakravarty M, Baller EB, Linn KA, Satterthwaite TD, Shinohara RT. Network enrichment significance testing in brain-phenotype association studies. Hum Brain Mapp 2024; 45:e26714. [PMID: 38878300 PMCID: PMC11179683 DOI: 10.1002/hbm.26714] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/10/2023] [Revised: 04/08/2024] [Accepted: 05/04/2024] [Indexed: 06/19/2024] Open
Abstract
Functional networks often guide our interpretation of spatial maps of brain-phenotype associations. However, methods for assessing enrichment of associations within networks of interest have varied in terms of both scientific rigor and underlying assumptions. While some approaches have relied on subjective interpretations, others have made unrealistic assumptions about spatial properties of imaging data, leading to inflated false positive rates. We seek to address this gap in existing methodology by borrowing insight from a method widely used in genetics research for testing enrichment of associations between a set of genes and a phenotype of interest. We propose network enrichment significance testing (NEST), a flexible framework for testing the specificity of brain-phenotype associations to functional networks or other sub-regions of the brain. We apply NEST to study enrichment of associations with structural and functional brain imaging data from a large-scale neurodevelopmental cohort study.
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Affiliation(s)
- Sarah M. Weinstein
- Department of Epidemiology and BiostatisticsTemple University College of Public HealthPhiladelphiaPennsylvaniaUSA
| | - Simon N. Vandekar
- Department of BiostatisticsVanderbilt University Medical CenterNashvilleTennesseeUSA
| | - Bin Li
- Department of Computer and Information SciencesTemple University College of Science and TechnologyPhiladelphiaPennsylvaniaUSA
| | - Aaron F. Alexander‐Bloch
- Department of PsychiatryUniversity of Pennsylvania, Perelman School of MedicinePhiladelphiaPennsylvaniaUSA
- Department of Child and Adolescent Psychiatry and Behavioral ScienceChildren's Hospital of PhiladelphiaPhiladelphiaPennsylvaniaUSA
| | - Armin Raznahan
- Section on Developmental NeurogenomicsNational Institute of Mental Health Intramural Research ProgramBethesdaMarylandUSA
| | - Mingyao Li
- Department of Biostatistics, Epidemiology, and InformaticsUniversity of Pennsylvania, Perelman School of MedicinePhiladelphiaPennsylvaniaUSA
| | - Raquel E. Gur
- Department of PsychiatryUniversity of Pennsylvania, Perelman School of MedicinePhiladelphiaPennsylvaniaUSA
| | - Ruben C. Gur
- Department of PsychiatryUniversity of Pennsylvania, Perelman School of MedicinePhiladelphiaPennsylvaniaUSA
| | - David R. Roalf
- Department of PsychiatryUniversity of Pennsylvania, Perelman School of MedicinePhiladelphiaPennsylvaniaUSA
| | - Min Tae M. Park
- Department of Psychiatry, Temerty Faculty of MedicineUniversity of TorontoTorontoOntarioCanada
- Integrated Program in NeuroscienceMcGill UniversityQCCanada
| | - Mallar Chakravarty
- Department of PsychiatryMcGill UniversityQCCanada
- Cerebral Imaging Centre, Douglas Research Centre, McGill UniversityQCCanada
| | - Erica B. Baller
- Department of PsychiatryUniversity of Pennsylvania, Perelman School of MedicinePhiladelphiaPennsylvaniaUSA
| | - Kristin A. Linn
- Department of Biostatistics, Epidemiology, and InformaticsUniversity of Pennsylvania, Perelman School of MedicinePhiladelphiaPennsylvaniaUSA
| | - Theodore D. Satterthwaite
- Department of PsychiatryUniversity of Pennsylvania, Perelman School of MedicinePhiladelphiaPennsylvaniaUSA
| | - Russell T. Shinohara
- Department of Biostatistics, Epidemiology, and InformaticsUniversity of Pennsylvania, Perelman School of MedicinePhiladelphiaPennsylvaniaUSA
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22
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Wang X, Krieger-Redwood K, Lyu B, Lowndes R, Wu G, Souter NE, Wang X, Kong R, Shafiei G, Bernhardt BC, Cui Z, Smallwood J, Du Y, Jefferies E. The Brain's Topographical Organization Shapes Dynamic Interaction Patterns That Support Flexible Behavior Based on Rules and Long-Term Knowledge. J Neurosci 2024; 44:e2223232024. [PMID: 38527807 PMCID: PMC11140685 DOI: 10.1523/jneurosci.2223-23.2024] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/15/2023] [Revised: 03/14/2024] [Accepted: 03/17/2024] [Indexed: 03/27/2024] Open
Abstract
Adaptive behavior relies both on specific rules that vary across situations and stable long-term knowledge gained from experience. The frontoparietal control network (FPCN) is implicated in the brain's ability to balance these different influences on action. Here, we investigate how the topographical organization of the cortex supports behavioral flexibility within the FPCN. Functional properties of this network might reflect its juxtaposition between the dorsal attention network (DAN) and the default mode network (DMN), two large-scale systems implicated in top-down attention and memory-guided cognition, respectively. Our study tests whether subnetworks of FPCN are topographically proximal to the DAN and the DMN, respectively, and how these topographical differences relate to functional differences: the proximity of each subnetwork is anticipated to play a pivotal role in generating distinct cognitive modes relevant to working memory and long-term memory. We show that FPCN subsystems share multiple anatomical and functional similarities with their neighboring systems (DAN and DMN) and that this topographical architecture supports distinct interaction patterns that give rise to different patterns of functional behavior. The FPCN acts as a unified system when long-term knowledge supports behavior but becomes segregated into discrete subsystems with different patterns of interaction when long-term memory is less relevant. In this way, our study suggests that the topographical organization of the FPCN and the connections it forms with distant regions of cortex are important influences on how this system supports flexible behavior.
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Affiliation(s)
- Xiuyi Wang
- CAS Key Laboratory of Behavioral Science, Institute of Psychology, Chinese Academy of Sciences, Beijing 100101, China
- Department of Psychology, University of Chinese Academy of Sciences, Beijing 100049, China
- Department of Psychology, University of York, Heslington, York YO10 5DD, United Kingdom
| | - Katya Krieger-Redwood
- Department of Psychology, University of York, Heslington, York YO10 5DD, United Kingdom
| | - Baihan Lyu
- CAS Key Laboratory of Behavioral Science, Institute of Psychology, Chinese Academy of Sciences, Beijing 100101, China
- Department of Psychology, University of Chinese Academy of Sciences, Beijing 100049, China
| | - Rebecca Lowndes
- Department of Psychology, University of York, Heslington, York YO10 5DD, United Kingdom
| | - Guowei Wu
- CAS Key Laboratory of Behavioral Science, Institute of Psychology, Chinese Academy of Sciences, Beijing 100101, China
- Department of Psychology, University of Chinese Academy of Sciences, Beijing 100049, China
| | - Nicholas E Souter
- Department of Psychology, University of York, Heslington, York YO10 5DD, United Kingdom
| | - Xiaokang Wang
- Department of Biomedical Engineering, University of California, Davis, California 95616
| | - Ru Kong
- Centre for Sleep and Cognition (CSC) & Centre for Translational Magnetic Resonance Research (TMR), Yong Loo Lin School of Medicine, National University of Singapore, Singapore 117549, Singapore
| | - Golia Shafiei
- Department of Psychiatry, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania 19104
| | - Boris C Bernhardt
- McConnell Brain Imaging Centre, Montreal Neurological Institute and Hospital, McGill University, Montreal, Quebec H3A 2B4, Canada
| | - Zaixu Cui
- Chinese Institute for Brain Research, Beijing 102206, China
| | - Jonathan Smallwood
- Department of Psychology, Queens University, Kingston, Ontario K7L 3N6, Canada
| | - Yi Du
- CAS Key Laboratory of Behavioral Science, Institute of Psychology, Chinese Academy of Sciences, Beijing 100101, China
- Department of Psychology, University of Chinese Academy of Sciences, Beijing 100049, China
- Chinese Institute for Brain Research, Beijing 102206, China
- CAS Center for Excellence in Brain Science and Intelligence Technology, Shanghai 200031, China
| | - Elizabeth Jefferies
- Department of Psychology, University of York, Heslington, York YO10 5DD, United Kingdom
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23
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Chakraborty S, Haast RAM, Onuska KM, Kanel P, Prado MAM, Prado VF, Khan AR, Schmitz TW. Multimodal gradients of basal forebrain connectivity across the neocortex. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2023.05.26.541324. [PMID: 37292595 PMCID: PMC10245994 DOI: 10.1101/2023.05.26.541324] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/10/2023]
Abstract
The cholinergic innervation of the cortex originates almost entirely from populations of neurons in the basal forebrain (BF). Structurally, the ascending BF cholinergic projections are highly branched, with individual cells targeting multiple different cortical regions. However, it is not known whether the structural organization of basal forebrain projections reflects their functional integration with the cortex. We therefore used high-resolution 7T diffusion and resting state functional MRI in humans to examine multimodal gradients of BF cholinergic connectivity with the cortex. Moving from anteromedial to posterolateral BF, we observed reduced tethering between structural and functional connectivity gradients, with the most pronounced dissimilarity localized in the nucleus basalis of Meynert (NbM). The cortical expression of this structure-function gradient revealed progressively weaker tethering moving from unimodal to transmodal cortex, with the lowest tethering in midcingulo-insular cortex. We used human [ 18 F] fluoroethoxy-benzovesamicol (FEOBV) PET to demonstrate that cortical areas with higher concentrations of cholinergic innervation tend to exhibit lower tethering between BF structural and functional connectivity, suggesting a pattern of increasingly diffuse axonal arborization. Anterograde viral tracing of cholinergic projections and [ 18 F] FEOBV PET in mice confirmed a gradient of axonal arborization across individual BF cholinergic neurons. Like humans, cholinergic neurons with the highest arborization project to cingulo-insular areas of the mouse isocortex. Altogether, our findings reveal that BF cholinergic neurons vary in their branch complexity, with certain subpopulations exhibiting greater modularity and others greater diffusivity in the functional integration of their cortical targets.
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24
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Petersen SE, Seitzman BA, Nelson SM, Wig GS, Gordon EM. Principles of cortical areas and their implications for neuroimaging. Neuron 2024:S0896-6273(24)00355-6. [PMID: 38834069 DOI: 10.1016/j.neuron.2024.05.008] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/05/2023] [Revised: 04/11/2024] [Accepted: 05/08/2024] [Indexed: 06/06/2024]
Abstract
Cortical organization should constrain the study of how the brain performs behavior and cognition. A fundamental concept in cortical organization is that of arealization: that the cortex is parceled into discrete areas. In part one of this report, we review how non-human animal studies have illuminated principles of cortical arealization by revealing: (1) what defines a cortical area, (2) how cortical areas are formed, (3) how cortical areas interact with one another, and (4) what "computations" or "functions" areas perform. In part two, we discuss how these principles apply to neuroimaging research. In doing so, we highlight several examples where the commonly accepted interpretation of neuroimaging observations requires assumptions that violate the principles of arealization, including nonstationary areas that move on short time scales, large-scale gradients as organizing features, and cortical areas with singular functionality that perfectly map psychological constructs. Our belief is that principles of neurobiology should strongly guide the nature of computational explanations.
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Affiliation(s)
- Steven E Petersen
- Mallinckrodt Institute of Radiology, Washington University School of Medicine, St. Louis, MO 63110, USA; Department of Neurology, Washington University School of Medicine, St. Louis, MO 63110, USA; Department of Biomedical Engineering, Washington University in St. Louis, St. Louis, MO 63130, USA; Department of Psychological and Brain Sciences, Washington University in St. Louis, St. Louis, MO 63130, USA; Department of Pediatrics, Washington University School of Medicine, St. Louis, MO 63110, USA
| | - Benjamin A Seitzman
- Mallinckrodt Institute of Radiology, Washington University School of Medicine, St. Louis, MO 63110, USA
| | - Steven M Nelson
- Department of Pediatrics, University of Minnesota Medical School, Minneapolis, MN 55455, USA; Masonic Institute for the Developing Brain, University of Minnesota, Minneapolis, MN 55455, USA
| | - Gagan S Wig
- Center for Vital Longevity, School of Behavioral and Brain Sciences, University of Texas at Dallas, Dallas, TX 75235, USA; Department of Psychiatry, University of Texas Southwestern Medical Center, Dallas, TX 75390, USA
| | - Evan M Gordon
- Mallinckrodt Institute of Radiology, Washington University School of Medicine, St. Louis, MO 63110, USA.
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25
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Lapate RC, Heckner MK, Phan AT, Tambini A, D'Esposito M. Information-based TMS to mid-lateral prefrontal cortex disrupts action goals during emotional processing. Nat Commun 2024; 15:4294. [PMID: 38769359 PMCID: PMC11106324 DOI: 10.1038/s41467-024-48015-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/26/2023] [Accepted: 04/18/2024] [Indexed: 05/22/2024] Open
Abstract
The ability to respond to emotional events in a context-sensitive and goal-oriented manner is essential for adaptive functioning. In models of behavioral and emotion regulation, the lateral prefrontal cortex (LPFC) is postulated to maintain goal-relevant representations that promote cognitive control, an idea rarely tested with causal inference. Here, we altered mid-LPFC function in healthy individuals using a putatively inhibitory brain stimulation protocol (continuous theta burst; cTBS), followed by fMRI scanning. Participants performed the Affective Go/No-Go task, which requires goal-oriented action during affective processing. We targeted mid-LPFC (vs. a Control site) based on the individualized location of action-goal representations observed during the task. cTBS to mid-LPFC reduced action-goal representations in mid-LPFC and impaired goal-oriented action, particularly during processing of negative emotional cues. During negative-cue processing, cTBS to mid-LPFC reduced functional coupling between mid-LPFC and nodes of the default mode network, including frontopolar cortex-a region thought to modulate LPFC control signals according to internal states. Collectively, these results indicate that mid-LPFC goal-relevant representations play a causal role in governing context-sensitive cognitive control during emotional processing.
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Affiliation(s)
- R C Lapate
- Department of Psychological & Brain Sciences, University of California, Santa Barbara, Santa Barbara, CA, USA.
| | - M K Heckner
- Institute of Neuroscience and Medicine, Research Centre Jülich, Jülich, Germany
| | - A T Phan
- Harvard-MIT Division of Health Sciences and Technology, Cambridge, MA, USA
| | - A Tambini
- Center for Biomedical Imaging and Neuromodulation, Nathan S. Kline Institute for Psychiatric Research, Orangeburg, NY, USA
- Department of Psychiatry, New York University School of Medicine, New York, NY, USA
| | - M D'Esposito
- Helen Wills Neuroscience Institute and Department of Psychology, University of California, Berkeley, Berkeley, CA, USA
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26
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Liang Q, Ma J, Chen X, Lin Q, Shu N, Dai Z, Lin Y. A Hybrid Routing Pattern in Human Brain Structural Network Revealed By Evolutionary Computation. IEEE TRANSACTIONS ON MEDICAL IMAGING 2024; 43:1895-1909. [PMID: 38194401 DOI: 10.1109/tmi.2024.3351907] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/11/2024]
Abstract
The human brain functional connectivity network (FCN) is constrained and shaped by the communication processes in the structural connectivity network (SCN). The underlying communication mechanism thus becomes a critical issue for understanding the formation and organization of the FCN. A number of communication models supported by different routing strategies have been proposed, with shortest path (SP), random diffusion (DIF), and spatial navigation (NAV) as the most typical, respectively requiring network global knowledge, local knowledge, and both for path seeking. Yet these models all assumed every brain region to use one routing strategy uniformly, ignoring convergent evidence that supports the regional heterogeneity in both terms of biological substrates and functional roles. In this regard, the current study developed a hybrid communication model that allowed each brain region to choose a routing strategy from SP, DIF, and NAV independently. A genetic algorithm was designed to uncover the underlying region-wise hybrid routing strategy (namely HYB). The HYB was found to outperform the three typical routing strategies in predicting FCN and facilitating robust communication. Analyses on HYB further revealed that brain regions in lower-order functional modules inclined to route signals using global knowledge, while those in higher-order functional modules preferred DIF that requires only local knowledge. Compared to regions that used global knowledge for routing, regions using DIF had denser structural connections, participated in more functional modules, but played a less dominant role within modules. Together, our findings further evidenced that hybrid routing underpins efficient SCN communication and locally heterogeneous structure-function coupling.
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27
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Namgung JY, Park Y, Park Y, Kim CY, Park BY. Diffusion time-related structure-function coupling reveals differential association with inter-individual variations in body mass index. Neuroimage 2024; 291:120590. [PMID: 38548036 DOI: 10.1016/j.neuroimage.2024.120590] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/12/2023] [Revised: 03/11/2024] [Accepted: 03/25/2024] [Indexed: 04/13/2024] Open
Abstract
Body mass index (BMI) is an indicator of obesity, and recent neuroimaging studies have demonstrated that inter-individual variations in BMI are associated with altered brain structure and function. However, the mechanism underlying the alteration of structure-function correspondence according to BMI is under-investigated. In this study, we studied structural and functional connectivity derived from diffusion MRI tractography and inter-regional correlations of functional MRI time series, respectively. We combined the structural and functional connectivity information using the Riemannian optimization approach. First, the low-dimensional principal eigenvectors (i.e., gradients) of the structural connectivity were generated by applying diffusion map embedding with varying diffusion times. A transformation was identified so that the structural and functional embeddings share the same coordinate system, and subsequently, the functional connectivity matrix was simulated. Then, we generated gradients from the simulated functional connectivity matrix. We found the most apparent cortical hierarchical organization differentiating between low-level sensory and higher-order transmodal regions in the middle of the diffusion time, indicating that the hierarchical organization of the brain may reflect the intermediate mechanisms of mono- and polysynaptic communications. Associations between the functional gradients and BMI were strongest when the hierarchical structure was the most evident. Moreover, the gradient-BMI association map was related to the microstructural features, and the findings indicated that the BMI-related structure-function coupling was significantly associated with brain microstructure, particularly in higher-order transmodal areas. Finally, transcriptomic association analysis revealed the potential biological underpinnings specifying gene enrichment in the striatum, hypothalamus, and cortical cells. Our findings provide evidence that structure-function correspondence is strongly coupled with BMI when hierarchical organization is the most apparent and that the associations are related to the multiscale properties of the brain, leading to an advanced understanding of the neural mechanisms related to BMI.
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Affiliation(s)
| | - Yeongjun Park
- Department of Electrical and Computer Engineering, Sungkyunkwan University, Suwon, Republic of Korea
| | - Yunseo Park
- Department of Data Science, Inha University, Incheon, Republic of Korea
| | - Chae Yeon Kim
- Department of Data Science, Inha University, Incheon, Republic of Korea
| | - Bo-Yong Park
- Department of Data Science, Inha University, Incheon, Republic of Korea; Department of Statistics and Data Science, Inha University, Incheon, Republic of Korea; Center for Neuroscience Imaging Research, Institute for Basic Science, Suwon, Republic of Korea.
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28
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Yang Y, Zhen Y, Wang X, Liu L, Zheng Y, Zheng Z, Zheng H, Tang S. Altered asymmetry of functional connectome gradients in major depressive disorder. Front Neurosci 2024; 18:1385920. [PMID: 38745933 PMCID: PMC11092381 DOI: 10.3389/fnins.2024.1385920] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/14/2024] [Accepted: 04/11/2024] [Indexed: 05/16/2024] Open
Abstract
Introduction Major depressive disorder (MDD) is a debilitating disease involving sensory and higher-order cognitive dysfunction. Previous work has shown altered asymmetry in MDD, including abnormal lateralized activation and disrupted hemispheric connectivity. However, it remains unclear whether and how MDD affects functional asymmetries in the context of intrinsic hierarchical organization. Methods Here, we evaluate intra- and inter-hemispheric asymmetries of the first three functional gradients, characterizing unimodal-transmodal, visual-somatosensory, and somatomotor/default mode-multiple demand hierarchies, to study MDD-related alterations in overarching system-level architecture. Results We find that, relative to the healthy controls, MDD patients exhibit alterations in both primary sensory regions (e.g., visual areas) and transmodal association regions (e.g., default mode areas). We further find these abnormalities are woven in heterogeneous alterations along multiple functional gradients, associated with cognitive terms involving mind, memory, and visual processing. Moreover, through an elastic net model, we observe that both intra- and inter-asymmetric features are predictive of depressive traits measured by BDI-II scores. Discussion Altogether, these findings highlight a broad and mixed effect of MDD on functional gradient asymmetry, contributing to a richer understanding of the neurobiological underpinnings in MDD.
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Affiliation(s)
- Yaqian Yang
- School of Mathematical Sciences, Beihang University, Beijing, China
- Key Laboratory of Mathematics, Informatics and Behavioral Semantics, Beihang University, Beijing, China
| | - Yi Zhen
- School of Mathematical Sciences, Beihang University, Beijing, China
- Key Laboratory of Mathematics, Informatics and Behavioral Semantics, Beihang University, Beijing, China
| | - Xin Wang
- Key Laboratory of Mathematics, Informatics and Behavioral Semantics, Beihang University, Beijing, China
- Institute of Artificial Intelligence, Beihang University, Beijing, China
- Zhongguancun Laboratory, Beijing, China
- Beijing Advanced Innovation Center for Future Blockchain and Privacy Computing, Beihang University, Beijing, China
- PengCheng Laboratory, Shenzhen, China
| | - Longzhao Liu
- Key Laboratory of Mathematics, Informatics and Behavioral Semantics, Beihang University, Beijing, China
- Institute of Artificial Intelligence, Beihang University, Beijing, China
- Zhongguancun Laboratory, Beijing, China
- Beijing Advanced Innovation Center for Future Blockchain and Privacy Computing, Beihang University, Beijing, China
- PengCheng Laboratory, Shenzhen, China
| | - Yi Zheng
- School of Mathematical Sciences, Beihang University, Beijing, China
- Key Laboratory of Mathematics, Informatics and Behavioral Semantics, Beihang University, Beijing, China
| | - Zhiming Zheng
- Key Laboratory of Mathematics, Informatics and Behavioral Semantics, Beihang University, Beijing, China
- Institute of Artificial Intelligence, Beihang University, Beijing, China
- Zhongguancun Laboratory, Beijing, China
- Beijing Advanced Innovation Center for Future Blockchain and Privacy Computing, Beihang University, Beijing, China
- PengCheng Laboratory, Shenzhen, China
- Institute of Medical Artificial Intelligence, Binzhou Medical University, Yantai, China
- State Key Lab of Software Development Environment, Beihang University, Beijing, China
| | - Hongwei Zheng
- Beijing Academy of Blockchain and Edge Computing, Beijing, China
| | - Shaoting Tang
- Key Laboratory of Mathematics, Informatics and Behavioral Semantics, Beihang University, Beijing, China
- Institute of Artificial Intelligence, Beihang University, Beijing, China
- Zhongguancun Laboratory, Beijing, China
- Beijing Advanced Innovation Center for Future Blockchain and Privacy Computing, Beihang University, Beijing, China
- PengCheng Laboratory, Shenzhen, China
- Institute of Medical Artificial Intelligence, Binzhou Medical University, Yantai, China
- State Key Lab of Software Development Environment, Beihang University, Beijing, China
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29
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Luppi AI, Olbrich E, Finn C, Suárez LE, Rosas FE, Mediano PA, Jost J. Quantifying synergy and redundancy between networks. CELL REPORTS. PHYSICAL SCIENCE 2024; 5:101892. [PMID: 38720789 PMCID: PMC11077508 DOI: 10.1016/j.xcrp.2024.101892] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/14/2023] [Revised: 01/18/2024] [Accepted: 03/01/2024] [Indexed: 05/12/2024]
Abstract
Understanding how different networks relate to each other is key for understanding complex systems. We introduce an intuitive yet powerful framework to disentangle different ways in which networks can be (dis)similar and complementary to each other. We decompose the shortest paths between nodes as uniquely contributed by one source network, or redundantly by either, or synergistically by both together. Our approach considers the networks' full topology, providing insights at multiple levels of resolution: from global statistics to individual paths. Our framework is widely applicable across scientific domains, from public transport to brain networks. In humans and 124 other species, we demonstrate the prevalence of unique contributions by long-range white-matter fibers in structural brain networks. Across species, efficient communication also relies on significantly greater synergy between long-range and short-range fibers than expected by chance. Our framework could find applications for designing network systems or evaluating existing ones.
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Affiliation(s)
- Andrea I. Luppi
- Division of Anaesthesia and Department of Clinical Neurosciences, University of Cambridge, Cambridge, UK
- St John’s College, University of Cambridge, Cambridge, UK
- Centre for Eudaimonia and Human Flourishing, University of Oxford, Oxford, UK
- Montreal Neurological Institute, McGill University, Montreal, QC, Canada
| | - Eckehard Olbrich
- Max Planck Institute for Mathematics in the Sciences, Leipzig, Germany
| | - Conor Finn
- Max Planck Institute for Mathematics in the Sciences, Leipzig, Germany
| | - Laura E. Suárez
- Montreal Neurological Institute, McGill University, Montreal, QC, Canada
| | - Fernando E. Rosas
- Centre for Eudaimonia and Human Flourishing, University of Oxford, Oxford, UK
- Department of Informatics, University of Sussex, Brighton, UK
- Centre for Complexity Science, Imperial College London, London, UK
- Centre for Psychedelic Research, Department of Brain Sciences, Imperial College London, London, UK
| | | | - Jürgen Jost
- Max Planck Institute for Mathematics in the Sciences, Leipzig, Germany
- ScaDS.AI, Leipzig University, Leipzig, Germany
- Santa Fe Institute, Santa Fe, NM, USA
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30
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Popp JL, Thiele JA, Faskowitz J, Seguin C, Sporns O, Hilger K. Structural-functional brain network coupling predicts human cognitive ability. Neuroimage 2024; 290:120563. [PMID: 38492685 DOI: 10.1016/j.neuroimage.2024.120563] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/01/2023] [Revised: 10/14/2023] [Accepted: 03/01/2024] [Indexed: 03/18/2024] Open
Abstract
Individual differences in general cognitive ability (GCA) have a biological basis within the structure and function of the human brain. Network neuroscience investigations revealed neural correlates of GCA in structural as well as in functional brain networks. However, whether the relationship between structural and functional networks, the structural-functional brain network coupling (SC-FC coupling), is related to individual differences in GCA remains an open question. We used data from 1030 adults of the Human Connectome Project, derived structural connectivity from diffusion weighted imaging, functional connectivity from resting-state fMRI, and assessed GCA as a latent g-factor from 12 cognitive tasks. Two similarity measures and six communication measures were used to model possible functional interactions arising from structural brain networks. SC-FC coupling was estimated as the degree to which these measures align with the actual functional connectivity, providing insights into different neural communication strategies. At the whole-brain level, higher GCA was associated with higher SC-FC coupling, but only when considering path transitivity as neural communication strategy. Taking region-specific variations in the SC-FC coupling strategy into account and differentiating between positive and negative associations with GCA, allows for prediction of individual cognitive ability scores in a cross-validated prediction framework (correlation between predicted and observed scores: r = 0.25, p < .001). The same model also predicts GCA scores in a completely independent sample (N = 567, r = 0.19, p < .001). Our results propose structural-functional brain network coupling as a neurobiological correlate of GCA and suggest brain region-specific coupling strategies as neural basis of efficient information processing predictive of cognitive ability.
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Affiliation(s)
- Johanna L Popp
- Department of Psychology I, Würzburg University, Marcusstr. 9-11, Würzburg D 97070, Germany.
| | - Jonas A Thiele
- Department of Psychology I, Würzburg University, Marcusstr. 9-11, Würzburg D 97070, Germany
| | - Joshua Faskowitz
- Department of Psychological and Brain Sciences, Indiana University, 1101 E. 10th St., Bloomington 47405-7007, IN, USA
| | - Caio Seguin
- Department of Psychological and Brain Sciences, Indiana University, 1101 E. 10th St., Bloomington 47405-7007, IN, USA
| | - Olaf Sporns
- Department of Psychological and Brain Sciences, Indiana University, 1101 E. 10th St., Bloomington 47405-7007, IN, USA
| | - Kirsten Hilger
- Department of Psychology I, Würzburg University, Marcusstr. 9-11, Würzburg D 97070, Germany.
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31
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Jamison KW, Gu Z, Wang Q, Sabuncu MR, Kuceyeski A. Release the Krakencoder: A unified brain connectome translation and fusion tool. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2024.04.12.589274. [PMID: 38659856 PMCID: PMC11042193 DOI: 10.1101/2024.04.12.589274] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 04/26/2024]
Abstract
Brain connectivity can be estimated in many ways, depending on modality and processing strategy. Here we present the Krakencoder, a joint connectome mapping tool that simultaneously, bidirectionally translates between structural (SC) and functional connectivity (FC), and across different atlases and processing choices via a common latent representation. These mappings demonstrate unprecedented accuracy and individual-level identifiability; the mapping between SC and FC has identifiability 42-54% higher than existing models. The Krakencoder combines all connectome flavors via a shared low-dimensional latent space. This "fusion" representation i) better reflects familial relatedness, ii) preserves age- and sex-relevant information and iii) enhances cognition-relevant information. The Krakencoder can be applied without retraining to new, out-of-age-distribution data while still preserving inter-individual differences in the connectome predictions and familial relationships in the latent representations. The Krakencoder is a significant leap forward in capturing the relationship between multi-modal brain connectomes in an individualized, behaviorally- and demographically-relevant way.
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Affiliation(s)
- Keith W Jamison
- Department of Computational Biology, Cornell University, Ithaca, NY, USA
- Department of Radiology, Weill Cornell Medicine, New York, New York, USA
| | - Zijin Gu
- School of Electrical and Computer Engineering, Cornell University and Cornell Tech, New York, NY, USA
| | - Qinxin Wang
- Department of Biomedical Engineering, Tsinghua University, Beijing, 100084, China
| | - Mert R Sabuncu
- Department of Radiology, Weill Cornell Medicine, New York, New York, USA
- School of Electrical and Computer Engineering, Cornell University and Cornell Tech, New York, NY, USA
| | - Amy Kuceyeski
- Department of Computational Biology, Cornell University, Ithaca, NY, USA
- Department of Radiology, Weill Cornell Medicine, New York, New York, USA
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32
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Kawata NYS, Nishitani S, Yao A, Takiguchi S, Mizuno Y, Mizushima S, Makita K, Hamamura S, Saito DN, Okazawa H, Fujisawa TX, Tomoda A. Brain structures and functional connectivity in neglected children with no other types of maltreatment. Neuroimage 2024; 292:120589. [PMID: 38575041 DOI: 10.1016/j.neuroimage.2024.120589] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/19/2023] [Revised: 03/11/2024] [Accepted: 03/25/2024] [Indexed: 04/06/2024] Open
Abstract
Child maltreatment can adversely affect brain development, leading to vulnerabilities in brain structure and function and various psychiatric disorders. Among the various types of child maltreatment, neglect has the highest incidence rate (76.0%); however, data on its sole adverse influence on the brain remain limited. This case-control brain magnetic resonance imaging (MRI) study identified the changes in gray matter structure and function that distinguish neglected children with no other type of maltreatment (Neglect group, n = 23) from typically developing children (TD group, n = 140), and investigated the association between these structural and functional differences and specific psychosocial phenotypes observed in neglected children. Our results showed that the Neglect group had a larger right and left anterior cingulate cortex (R/L.ACC) and smaller left angular gyrus (L.AG) gray matter volume. The larger R/L.ACC was associated with hyperactivity and inattention. Resting-state functional analysis showed increased functional connectivity (FC) between the left supramarginal gyrus (L.SMG) in the salience network (SN) and the right middle frontal gyrus (R.MFG) simultaneously with a decrease in FC with the L.ACC for the same seed. The increased FC for the R.MFG was associated with difficulty in peer problems and depressive symptoms; a mediating effect was evident for depressive symptoms. These results suggest that the structural atypicality of the R/L.ACC indirectly contributes to the disturbed FCs within the SN, thereby exacerbating depressive symptoms in neglected children. In conclusion, exposure to neglect in childhood may lead to maladaptive brain development, particularly neural changes associated with depressive symptoms.
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Affiliation(s)
- Natasha Y S Kawata
- Research Center for Child Mental Development, University of Fukui, 23-3 Matsuoka-Shimoaizuki, Eiheiji-cho, Fukui 910-1193, Japan
| | - Shota Nishitani
- Research Center for Child Mental Development, University of Fukui, 23-3 Matsuoka-Shimoaizuki, Eiheiji-cho, Fukui 910-1193, Japan; Division of Developmental Higher Brain Functions, United Graduate School of Child Development, Osaka University, Kanazawa University, Hamamatsu University School of Medicine, Chiba University and University of Fukui, Fukui 910-1193, Japan; Life Science Innovation Center, University of Fukui, Fukui 910-8507, Japan.
| | - Akiko Yao
- Research Center for Child Mental Development, University of Fukui, 23-3 Matsuoka-Shimoaizuki, Eiheiji-cho, Fukui 910-1193, Japan
| | - Shinichiro Takiguchi
- Division of Developmental Higher Brain Functions, United Graduate School of Child Development, Osaka University, Kanazawa University, Hamamatsu University School of Medicine, Chiba University and University of Fukui, Fukui 910-1193, Japan; Life Science Innovation Center, University of Fukui, Fukui 910-8507, Japan; Department of Child and Adolescent Psychological Medicine, University of Fukui Hospital, Fukui 910-1193, Japan
| | - Yoshifumi Mizuno
- Research Center for Child Mental Development, University of Fukui, 23-3 Matsuoka-Shimoaizuki, Eiheiji-cho, Fukui 910-1193, Japan; Division of Developmental Higher Brain Functions, United Graduate School of Child Development, Osaka University, Kanazawa University, Hamamatsu University School of Medicine, Chiba University and University of Fukui, Fukui 910-1193, Japan; Department of Child and Adolescent Psychological Medicine, University of Fukui Hospital, Fukui 910-1193, Japan
| | - Sakae Mizushima
- Research Center for Child Mental Development, University of Fukui, 23-3 Matsuoka-Shimoaizuki, Eiheiji-cho, Fukui 910-1193, Japan; Division of Developmental Higher Brain Functions, United Graduate School of Child Development, Osaka University, Kanazawa University, Hamamatsu University School of Medicine, Chiba University and University of Fukui, Fukui 910-1193, Japan
| | - Kai Makita
- Research Center for Child Mental Development, University of Fukui, 23-3 Matsuoka-Shimoaizuki, Eiheiji-cho, Fukui 910-1193, Japan
| | - Shoko Hamamura
- Division of Developmental Higher Brain Functions, United Graduate School of Child Development, Osaka University, Kanazawa University, Hamamatsu University School of Medicine, Chiba University and University of Fukui, Fukui 910-1193, Japan; Department of Child and Adolescent Psychological Medicine, University of Fukui Hospital, Fukui 910-1193, Japan
| | - Daisuke N Saito
- Research Center for Child Mental Development, University of Fukui, 23-3 Matsuoka-Shimoaizuki, Eiheiji-cho, Fukui 910-1193, Japan; Division of Developmental Higher Brain Functions, United Graduate School of Child Development, Osaka University, Kanazawa University, Hamamatsu University School of Medicine, Chiba University and University of Fukui, Fukui 910-1193, Japan
| | - Hidehiko Okazawa
- Life Science Innovation Center, University of Fukui, Fukui 910-8507, Japan; Biomedical Imaging Research Center, University of Fukui, Fukui 910-1193, Japan
| | - Takashi X Fujisawa
- Research Center for Child Mental Development, University of Fukui, 23-3 Matsuoka-Shimoaizuki, Eiheiji-cho, Fukui 910-1193, Japan; Division of Developmental Higher Brain Functions, United Graduate School of Child Development, Osaka University, Kanazawa University, Hamamatsu University School of Medicine, Chiba University and University of Fukui, Fukui 910-1193, Japan; Life Science Innovation Center, University of Fukui, Fukui 910-8507, Japan
| | - Akemi Tomoda
- Research Center for Child Mental Development, University of Fukui, 23-3 Matsuoka-Shimoaizuki, Eiheiji-cho, Fukui 910-1193, Japan; Division of Developmental Higher Brain Functions, United Graduate School of Child Development, Osaka University, Kanazawa University, Hamamatsu University School of Medicine, Chiba University and University of Fukui, Fukui 910-1193, Japan; Life Science Innovation Center, University of Fukui, Fukui 910-8507, Japan; Department of Child and Adolescent Psychological Medicine, University of Fukui Hospital, Fukui 910-1193, Japan.
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33
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Mills EP, Bosma RL, Rogachov A, Cheng JC, Osborne NR, Kim JA, Besik A, Bhatia A, Davis KD. Pretreatment Brain White Matter Integrity Associated With Neuropathic Pain Relief and Changes in Temporal Summation of Pain Following Ketamine. THE JOURNAL OF PAIN 2024:104536. [PMID: 38615801 DOI: 10.1016/j.jpain.2024.104536] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/17/2023] [Revised: 03/07/2024] [Accepted: 04/09/2024] [Indexed: 04/16/2024]
Abstract
Neuropathic pain (NP) is a prevalent condition often associated with heightened pain responsiveness suggestive of central sensitization. Neuroimaging biomarkers of treatment outcomes may help develop personalized treatment strategies, but white matter (WM) properties have been underexplored for this purpose. Here we assessed whether WM pathways of the default mode network (DMN: medial prefrontal cortex [mPFC], posterior cingulate cortex, and precuneus) and descending pain modulation system (periaqueductal gray [PAG]) are associated with ketamine analgesia and attenuated temporal summation of pain (TSP, reflecting central sensitization) in NP. We used a fixel-based analysis of diffusion-weighted imaging data to evaluate WM microstructure (fiber density [FD]) and macrostructure (fiber bundle cross-section) within the DMN and mPFC-PAG pathways in 70 individuals who underwent magnetic resonance imaging and TSP testing; 35 with NP who underwent ketamine treatment and 35 age- and sex-matched pain-free individuals. Individuals with NP were assessed before and 1 month after treatment; those with ≥30% pain relief were considered responders (n = 18), or otherwise as nonresponders (n = 17). We found that WM structure within the DMN and mPFC-PAG pathways did not differentiate responders from nonresponders. However, pretreatment FD in the anterior limb of the internal capsule correlated with pain relief (r=.48). Moreover, pretreatment FD in the DMN (left mPFC-precuneus/posterior cingulate cortex; r=.52) and mPFC-PAG (r=.42) negatively correlated with changes in TSP. This suggests that WM microstructure in the DMN and mPFC-PAG pathway is associated with the degree to which ketamine reduces central sensitization. Thus, fixel metrics of WM structure may hold promise to predict ketamine NP treatment outcomes. PERSPECTIVE: We used advanced fixel-based analyses of MRI diffusion-weighted imaging data to identify pretreatment WM microstructure associated with ketamine outcomes, including analgesia and markers of attenuated central sensitization. Exploring associations between brain structure and treatment outcomes could contribute to a personalized approach to treatment for individuals with NP.
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Affiliation(s)
- Emily P Mills
- Division of Brain, Imaging, and Behaviour, Krembil Brain Institute, University Health Network, Toronto, Ontario, Canada
| | - Rachael L Bosma
- Division of Brain, Imaging, and Behaviour, Krembil Brain Institute, University Health Network, Toronto, Ontario, Canada
| | - Anton Rogachov
- Division of Brain, Imaging, and Behaviour, Krembil Brain Institute, University Health Network, Toronto, Ontario, Canada; Institute of Medical Science, University of Toronto, Toronto, Ontario, Canada
| | - Joshua C Cheng
- Division of Brain, Imaging, and Behaviour, Krembil Brain Institute, University Health Network, Toronto, Ontario, Canada; Institute of Medical Science, University of Toronto, Toronto, Ontario, Canada
| | - Natalie R Osborne
- Division of Brain, Imaging, and Behaviour, Krembil Brain Institute, University Health Network, Toronto, Ontario, Canada; Institute of Medical Science, University of Toronto, Toronto, Ontario, Canada
| | - Junseok A Kim
- Division of Brain, Imaging, and Behaviour, Krembil Brain Institute, University Health Network, Toronto, Ontario, Canada; Institute of Medical Science, University of Toronto, Toronto, Ontario, Canada
| | - Ariana Besik
- Division of Brain, Imaging, and Behaviour, Krembil Brain Institute, University Health Network, Toronto, Ontario, Canada
| | - Anuj Bhatia
- Department of Anesthesia and Pain Management, University Health Network, Toronto, Ontario, Canada; Department of Anesthesia, University of Toronto, Toronto, Ontario, Canada
| | - Karen D Davis
- Division of Brain, Imaging, and Behaviour, Krembil Brain Institute, University Health Network, Toronto, Ontario, Canada; Institute of Medical Science, University of Toronto, Toronto, Ontario, Canada; Department of Surgery, University of Toronto, Toronto, Ontario, Canada
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Saha R, Saha DK, Fu Z, Duda M, Silva RF, Calhoun VD. Analysis of Longitudinal Change Patterns in Developing Brain Using Functional and Structural Magnetic Resonance Imaging via Multimodal Fusion. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2024.04.07.588473. [PMID: 38645216 PMCID: PMC11030394 DOI: 10.1101/2024.04.07.588473] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 04/23/2024]
Abstract
Functional and structural magnetic resonance imaging (fMRI and sMRI) are complementary approaches that can be used to study longitudinal brain changes in adolescents. Each individual modality offers distinct insights into the brain. Each individual modality may overlook crucial aspects of brain analysis. By combining them, we can uncover hidden brain connections and gain a more comprehensive understanding. In previous work, we identified multivariate patterns of change in whole-brain function during adolescence. In this work, we focus on linking functional change patterns (FCPs) to brain structure. We introduce two approaches and applied them to data from the Adolescent Brain and Cognitive Development (ABCD) dataset. First, we evaluate voxelwise sMRI-FCP coupling to identify structural patterns linked to our previously identified FCPs. Our approach revealed multiple interesting patterns in functional network connectivity (FNC) and gray matter volume (GMV) data that were linked to subject level variation. FCP components 2 and 4 exhibit extensive associations between their loadings and voxel-wise GMV data. Secondly, we leveraged a symmetric multimodal fusion technique called multiset canonical correlation analysis (mCCA) + joint independent component analysis (jICA). Using this approach, we identify structured FCPs such as one showing increased connectivity between visual and sensorimotor domains and decreased connectivity between sensorimotor and cognitive control domains, linked to structural change patterns (SCPs) including alterations in the bilateral sensorimotor cortex. Interestingly, females exhibit stronger coupling between brain functional and structural changes than males, highlighting sex-related differences. The combined results from both asymmetric and symmetric multimodal fusion methods underscore the intricate sex-specific nuances in neural dynamics. By utilizing two complementary multimodal approaches, our study enhances our understanding of the dynamic nature of brain connectivity and structure during the adolescent period, shedding light on the nuanced processes underlying adolescent brain development.
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Affiliation(s)
- Rekha Saha
- Tri-institutional Center for Translational Research in Neuroimaging and Data Science (TReNDS), Georgia State University, Georgia Institute of Technology, and Emory University 55 Park Pl NE, Atlanta, GA 30303, USA
| | - Debbrata K. Saha
- Tri-institutional Center for Translational Research in Neuroimaging and Data Science (TReNDS), Georgia State University, Georgia Institute of Technology, and Emory University 55 Park Pl NE, Atlanta, GA 30303, USA
| | - Zening Fu
- Tri-institutional Center for Translational Research in Neuroimaging and Data Science (TReNDS), Georgia State University, Georgia Institute of Technology, and Emory University 55 Park Pl NE, Atlanta, GA 30303, USA
| | - Marlena Duda
- Tri-institutional Center for Translational Research in Neuroimaging and Data Science (TReNDS), Georgia State University, Georgia Institute of Technology, and Emory University 55 Park Pl NE, Atlanta, GA 30303, USA
| | - Rogers F. Silva
- Tri-institutional Center for Translational Research in Neuroimaging and Data Science (TReNDS), Georgia State University, Georgia Institute of Technology, and Emory University 55 Park Pl NE, Atlanta, GA 30303, USA
| | - Vince D. Calhoun
- Tri-institutional Center for Translational Research in Neuroimaging and Data Science (TReNDS), Georgia State University, Georgia Institute of Technology, and Emory University 55 Park Pl NE, Atlanta, GA 30303, USA
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35
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Greaves MD, Novelli L, Razi A. Structurally informed resting-state effective connectivity recapitulates cortical hierarchy. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2024.04.03.587831. [PMID: 38617335 PMCID: PMC11014588 DOI: 10.1101/2024.04.03.587831] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 04/16/2024]
Abstract
Interregional brain communication is mediated by the brain's physical wiring (i.e., structural connectivity). Yet, it remains unclear whether models describing directed, functional interactions between latent neuronal populations-effective connectivity-benefit from incorporating macroscale structural connectivity. Here, we assess a hierarchical empirical Bayes method: structural connectivity-based priors constrain the inversion of group-level resting-state effective connectivity, using subject-level posteriors as input; subsequently, group-level posteriors serve as empirical priors for re-evaluating subject-level effective connectivity. This approach permits knowledge of the brain's structure to inform inference of (multilevel) effective connectivity. In 17 resting-state brain networks, we find that a positive, monotonic relationship between structural connectivity and the prior probability of group-level effective connectivity generalizes across sessions and samples. Providing further validation, we show that inter-network differences in the coupling between structural and effective connectivity recapitulate a well-known unimodal-transmodal hierarchy. Thus, our results provide support for the use of our method over structurally uninformed alternatives.
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Affiliation(s)
- Matthew D. Greaves
- Turner Institute for Brain and Mental Health, School of Psychological Sciences, Monash University, Clayton, 3800, Australia
- Monash Biomedical Imaging, Monash University, Clayton, 3800, Australia
| | - Leonardo Novelli
- Turner Institute for Brain and Mental Health, School of Psychological Sciences, Monash University, Clayton, 3800, Australia
- Monash Biomedical Imaging, Monash University, Clayton, 3800, Australia
| | - Adeel Razi
- Turner Institute for Brain and Mental Health, School of Psychological Sciences, Monash University, Clayton, 3800, Australia
- Monash Biomedical Imaging, Monash University, Clayton, 3800, Australia
- Wellcome Centre for Human Neuroimaging, University College London, London, WC1N 3AR, United Kingdom
- CIFAR Azrieli Global Scholars Program, CIFAR, Toronto, M5G 1M1, Canada
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Wang X, Xue L, Hua L, Shao J, Yan R, Yao Z, Lu Q. Structure-function coupling and hierarchy-specific antidepressant response in major depressive disorder. Psychol Med 2024:1-10. [PMID: 38571298 DOI: 10.1017/s0033291724000801] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 04/05/2024]
Abstract
BACKGROUND Extensive research has explored altered structural and functional networks in major depressive disorder (MDD). However, studies examining the relationships between structure and function yielded heterogeneous and inconclusive results. Recent work has suggested that the structure-function relationship is not uniform throughout the brain but varies across different levels of functional hierarchy. This study aims to investigate changes in structure-function couplings (SFC) and their relevance to antidepressant response in MDD from a functional hierarchical perspective. METHODS We compared regional SFC between individuals with MDD (n = 258) and healthy controls (HC, n = 99) using resting-state functional magnetic resonance imaging and diffusion tensor imaging. We also compared antidepressant non-responders (n = 55) and responders (n = 68, defined by a reduction in depressive severity of >50%). To evaluate variations in altered and response-associated SFC across the functional hierarchy, we ranked significantly different regions by their principal gradient values and assessed patterns of increase or decrease along the gradient axis. The principal gradient value, calculated from 219 healthy individuals in the Human Connectome Project, represents a region's position along the principal gradient axis. RESULTS Compared to HC, MDD patients exhibited increased SFC in unimodal regions (lower principal gradient) and decreased SFC in transmodal regions (higher principal gradient) (p < 0.001). Responders primarily had higher SFC in unimodal regions and lower SFC in attentional networks (median principal gradient) (p < 0.001). CONCLUSIONS Our findings reveal opposing SFC alterations in low-level unimodal and high-level transmodal networks, underscoring spatial variability in MDD pathology. Moreover, hierarchy-specific antidepressant effects provide valuable insights into predicting treatment outcomes.
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Affiliation(s)
- Xinyi Wang
- School of Biological Sciences & Medical Engineering, Southeast University, Nanjing, China
- Child Development and Learning Science, Key Laboratory of Ministry of Education, Southeast University, Nanjing, China
| | - Li Xue
- School of Biological Sciences & Medical Engineering, Southeast University, Nanjing, China
- Child Development and Learning Science, Key Laboratory of Ministry of Education, Southeast University, Nanjing, China
| | - Lingling Hua
- Department of Psychiatry, the Affiliated Brain Hospital of Nanjing Medical University, Nanjing, China
| | - Junneng Shao
- School of Biological Sciences & Medical Engineering, Southeast University, Nanjing, China
- Child Development and Learning Science, Key Laboratory of Ministry of Education, Southeast University, Nanjing, China
| | - Rui Yan
- Department of Psychiatry, the Affiliated Brain Hospital of Nanjing Medical University, Nanjing, China
| | - Zhijian Yao
- Department of Psychiatry, the Affiliated Brain Hospital of Nanjing Medical University, Nanjing, China
- Nanjing Brain Hospital, Clinical Teaching Hospital of Medical School, Nanjing University, Nanjing, China
| | - Qing Lu
- School of Biological Sciences & Medical Engineering, Southeast University, Nanjing, China
- Child Development and Learning Science, Key Laboratory of Ministry of Education, Southeast University, Nanjing, China
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Myrov V, Siebenhühner F, Juvonen JJ, Arnulfo G, Palva S, Palva JM. Rhythmicity of neuronal oscillations delineates their cortical and spectral architecture. Commun Biol 2024; 7:405. [PMID: 38570628 PMCID: PMC10991572 DOI: 10.1038/s42003-024-06083-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/05/2023] [Accepted: 03/20/2024] [Indexed: 04/05/2024] Open
Abstract
Neuronal oscillations are commonly analyzed with power spectral methods that quantify signal amplitude, but not rhythmicity or 'oscillatoriness' per se. Here we introduce a new approach, the phase-autocorrelation function (pACF), for the direct quantification of rhythmicity. We applied pACF to human intracerebral stereoelectroencephalography (SEEG) and magnetoencephalography (MEG) data and uncovered a spectrally and anatomically fine-grained cortical architecture in the rhythmicity of single- and multi-frequency neuronal oscillations. Evidencing the functional significance of rhythmicity, we found it to be a prerequisite for long-range synchronization in resting-state networks and to be dynamically modulated during event-related processing. We also extended the pACF approach to measure 'burstiness' of oscillatory processes and characterized regions with stable and bursty oscillations. These findings show that rhythmicity is double-dissociable from amplitude and constitutes a functionally relevant and dynamic characteristic of neuronal oscillations.
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Affiliation(s)
- Vladislav Myrov
- Department of Neuroscience and Biomedical Engineering, Aalto University, Espoo, Finland.
| | - Felix Siebenhühner
- Neuroscience Center, Helsinki Institute of Life Science, University of Helsinki, Helsinki, Finland
- BioMag Laboratory, HUS Medical Imaging Center, Helsinki, Finland
| | - Joonas J Juvonen
- Department of Neuroscience and Biomedical Engineering, Aalto University, Espoo, Finland
- Neuroscience Center, Helsinki Institute of Life Science, University of Helsinki, Helsinki, Finland
| | - Gabriele Arnulfo
- Neuroscience Center, Helsinki Institute of Life Science, University of Helsinki, Helsinki, Finland
- Department of Informatics, Bioengineering, Robotics and System Engineering, University of Genoa, Genoa, Italy
| | - Satu Palva
- Neuroscience Center, Helsinki Institute of Life Science, University of Helsinki, Helsinki, Finland
- Centre for Cognitive Neuroimaging, School of Psychology and Neuroscience, University of Glasgow, Glasgow, UK
| | - J Matias Palva
- Department of Neuroscience and Biomedical Engineering, Aalto University, Espoo, Finland
- Neuroscience Center, Helsinki Institute of Life Science, University of Helsinki, Helsinki, Finland
- Centre for Cognitive Neuroimaging, School of Psychology and Neuroscience, University of Glasgow, Glasgow, UK
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Chakraborty S, Lee SK, Arnold SM, Haast RAM, Khan AR, Schmitz TW. Focal acetylcholinergic modulation of the human midcingulo-insular network during attention: Meta-analytic neuroimaging and behavioral evidence. J Neurochem 2024; 168:397-413. [PMID: 37864501 DOI: 10.1111/jnc.15990] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/03/2023] [Revised: 09/18/2023] [Accepted: 09/26/2023] [Indexed: 10/23/2023]
Abstract
The basal forebrain cholinergic neurons provide acetylcholine to the cortex via large projections. Recent molecular imaging work in humans indicates that the cortical cholinergic innervation is not uniformly distributed, but rather may disproportionately innervate cortical areas relevant to supervisory attention. In this study, we therefore reexamined the spatial relationship between acetylcholinergic modulation and attention in the human cortex using meta-analytic strategies targeting both pharmacological and non-pharmacological neuroimaging studies. We found that pharmaco-modulation of acetylcholine evoked both increased activity in the anterior cingulate and decreased activity in the opercular and insular cortex. In large independent meta-analyses of non-pharmacological neuroimaging research, we demonstrate that during attentional engagement these cortical areas exhibit (1) task-related co-activation with the basal forebrain, (2) task-related co-activation with one another, and (3) spatial overlap with dense cholinergic innervations originating from the basal forebrain, as estimated by multimodal positron emission tomography and magnetic resonance imaging. Finally, we provide meta-analytic evidence that pharmaco-modulation of acetylcholine also induces a speeding of responses to targets with no apparent tradeoff in accuracy. In sum, we demonstrate in humans that acetylcholinergic modulation of midcingulo-insular hubs of the ventral attention/salience network via basal forebrain afferents may coordinate selection of task relevant information, thereby facilitating cognition and behavior.
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Affiliation(s)
- Sudesna Chakraborty
- Neuroscience Graduate Program, Western University, London, Ontario, Canada
- Department of Medical Biophysics, Western University, London, Ontario, Canada
- Robarts Research Institute, Western University, London, Ontario, Canada
- Western Institute for Neuroscience, Western University, London, Ontario, Canada
| | - Sun Kyun Lee
- Western Institute for Neuroscience, Western University, London, Ontario, Canada
- Faculty of Dentistry, University of Toronto, Toronto, Ontario, Canada
| | - Sarah M Arnold
- Western Institute for Neuroscience, Western University, London, Ontario, Canada
- Department of Chemical Engineering, McMaster University, Hamilton, Ontario, Canada
| | - Roy A M Haast
- Western Institute for Neuroscience, Western University, London, Ontario, Canada
- CRMBM, CNRS UMR 7339, Aix-Marseille University, Marseille, France
| | - Ali R Khan
- Department of Medical Biophysics, Western University, London, Ontario, Canada
- Robarts Research Institute, Western University, London, Ontario, Canada
- Western Institute for Neuroscience, Western University, London, Ontario, Canada
| | - Taylor W Schmitz
- Robarts Research Institute, Western University, London, Ontario, Canada
- Western Institute for Neuroscience, Western University, London, Ontario, Canada
- Department of Physiology and Pharmacology, Western University, London, Ontario, Canada
- Lawson Health Research Institute, London, Ontario, Canada
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Luppi AI, Rosas FE, Mediano PAM, Menon DK, Stamatakis EA. Information decomposition and the informational architecture of the brain. Trends Cogn Sci 2024; 28:352-368. [PMID: 38199949 DOI: 10.1016/j.tics.2023.11.005] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/12/2023] [Revised: 11/09/2023] [Accepted: 11/17/2023] [Indexed: 01/12/2024]
Abstract
To explain how the brain orchestrates information-processing for cognition, we must understand information itself. Importantly, information is not a monolithic entity. Information decomposition techniques provide a way to split information into its constituent elements: unique, redundant, and synergistic information. We review how disentangling synergistic and redundant interactions is redefining our understanding of integrative brain function and its neural organisation. To explain how the brain navigates the trade-offs between redundancy and synergy, we review converging evidence integrating the structural, molecular, and functional underpinnings of synergy and redundancy; their roles in cognition and computation; and how they might arise over evolution and development. Overall, disentangling synergistic and redundant information provides a guiding principle for understanding the informational architecture of the brain and cognition.
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Affiliation(s)
- Andrea I Luppi
- Division of Anaesthesia, University of Cambridge, Cambridge, UK; Department of Clinical Neurosciences, University of Cambridge, Cambridge, UK; Montreal Neurological Institute, McGill University, Montreal, QC, Canada
| | - Fernando E Rosas
- Department of Informatics, University of Sussex, Brighton, UK; Centre for Psychedelic Research, Department of Brain Sciences, Imperial College London, London, UK; Centre for Complexity Science, Imperial College London, London, UK; Centre for Eudaimonia and Human Flourishing, University of Oxford, Oxford, UK
| | - Pedro A M Mediano
- Department of Computing, Imperial College London, London, UK; Department of Psychology, University of Cambridge, Cambridge, UK
| | - David K Menon
- Department of Medicine, University of Cambridge, Cambridge, UK; Wolfson Brain Imaging Centre, University of Cambridge, Cambridge, UK
| | - Emmanuel A Stamatakis
- Division of Anaesthesia, University of Cambridge, Cambridge, UK; Department of Clinical Neurosciences, University of Cambridge, Cambridge, UK.
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40
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Chen P, Yang H, Zheng X, Jia H, Hao J, Xu X, Li C, He X, Chen R, Okubo TS, Cui Z. Group-common and individual-specific effects of structure-function coupling in human brain networks with graph neural networks. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2023.11.22.568257. [PMID: 38045396 PMCID: PMC10690242 DOI: 10.1101/2023.11.22.568257] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/05/2023]
Abstract
The human cerebral cortex is organized into functionally segregated but synchronized regions bridged by the structural connectivity of white matter pathways. While structure-function coupling has been implicated in cognitive development and neuropsychiatric disorders, studies yield inconsistent findings. The extent to which the structure-function coupling reflects reliable individual differences or primarily group-common characteristics remains unclear, at both the global and regional brain levels. By leveraging two independent, high-quality datasets, we found that the graph neural network accurately predicted unseen individuals' functional connectivity from structural connectivity, reflecting a strong structure-function coupling. This coupling was primarily driven by network topology and was substantially stronger than that of the linear models. Moreover, we observed that structure-function coupling was dominated by group-common effects, with subtle yet significant individual-specific effects. The regional group and individual effects of coupling were hierarchically organized across the cortex along a sensorimotor-association axis, with lower group and higher individual effects in association cortices. These findings emphasize the importance of considering both group and individual effects in understanding cortical structure-function coupling, suggesting insights into interpreting individual differences of the coupling and informing connectivity-guided therapeutics.
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Pedersen R, Johansson J, Nordin K, Rieckmann A, Wåhlin A, Nyberg L, Bäckman L, Salami A. Dopamine D1-Receptor Organization Contributes to Functional Brain Architecture. J Neurosci 2024; 44:e0621232024. [PMID: 38302439 PMCID: PMC10941071 DOI: 10.1523/jneurosci.0621-23.2024] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/03/2023] [Revised: 12/01/2023] [Accepted: 01/21/2024] [Indexed: 02/03/2024] Open
Abstract
Recent work has recognized a gradient-like organization in cortical function, spanning from primary sensory to transmodal cortices. It has been suggested that this axis is aligned with regional differences in neurotransmitter expression. Given the abundance of dopamine D1-receptors (D1DR), and its importance for modulation and neural gain, we tested the hypothesis that D1DR organization is aligned with functional architecture, and that inter-regional relationships in D1DR co-expression modulate functional cross talk. Using the world's largest dopamine D1DR-PET and MRI database (N = 180%, 50% female), we demonstrate that D1DR organization follows a unimodal-transmodal hierarchy, expressing a high spatial correspondence to the principal gradient of functional connectivity. We also demonstrate that individual differences in D1DR density between unimodal and transmodal regions are associated with functional differentiation of the apices in the cortical hierarchy. Finally, we show that spatial co-expression of D1DR primarily modulates couplings within, but not between, functional networks. Together, our results show that D1DR co-expression provides a biomolecular layer to the functional organization of the brain.
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Affiliation(s)
- Robin Pedersen
- Department of Integrative Medical Biology, Umeå University, Umeå S-90197, Sweden
- Wallenberg Center for Molecular Medicine (WCMM), Umeå University, Umeå S-90197, Sweden
- Umeå Center for Functional Brain Imaging (UFBI), Umeå University, Umeå S-90197, Sweden
| | - Jarkko Johansson
- Department of Integrative Medical Biology, Umeå University, Umeå S-90197, Sweden
- Wallenberg Center for Molecular Medicine (WCMM), Umeå University, Umeå S-90197, Sweden
- Umeå Center for Functional Brain Imaging (UFBI), Umeå University, Umeå S-90197, Sweden
| | - Kristin Nordin
- Umeå Center for Functional Brain Imaging (UFBI), Umeå University, Umeå S-90197, Sweden
- Aging Research Center, Karolinska Institutet & Stockholm University, Stockholm S-17165, Sweden
| | - Anna Rieckmann
- Umeå Center for Functional Brain Imaging (UFBI), Umeå University, Umeå S-90197, Sweden
- Department of Radiation Sciences, Umeå University, Umeå S-90197, Sweden
- Max-Planck-Institut für Sozialrecht und Sozialpolitik, Munich 80799, Germany
| | - Anders Wåhlin
- Department of Integrative Medical Biology, Umeå University, Umeå S-90197, Sweden
- Umeå Center for Functional Brain Imaging (UFBI), Umeå University, Umeå S-90197, Sweden
| | - Lars Nyberg
- Department of Integrative Medical Biology, Umeå University, Umeå S-90197, Sweden
- Wallenberg Center for Molecular Medicine (WCMM), Umeå University, Umeå S-90197, Sweden
- Umeå Center for Functional Brain Imaging (UFBI), Umeå University, Umeå S-90197, Sweden
- Department of Radiation Sciences, Umeå University, Umeå S-90197, Sweden
| | - Lars Bäckman
- Aging Research Center, Karolinska Institutet & Stockholm University, Stockholm S-17165, Sweden
| | - Alireza Salami
- Department of Integrative Medical Biology, Umeå University, Umeå S-90197, Sweden
- Wallenberg Center for Molecular Medicine (WCMM), Umeå University, Umeå S-90197, Sweden
- Umeå Center for Functional Brain Imaging (UFBI), Umeå University, Umeå S-90197, Sweden
- Aging Research Center, Karolinska Institutet & Stockholm University, Stockholm S-17165, Sweden
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Xia J, Liu C, Li J, Meng Y, Yang S, Chen H, Liao W. Decomposing cortical activity through neuronal tracing connectome-eigenmodes in marmosets. Nat Commun 2024; 15:2289. [PMID: 38480767 PMCID: PMC10937940 DOI: 10.1038/s41467-024-46651-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/04/2023] [Accepted: 03/06/2024] [Indexed: 03/17/2024] Open
Abstract
Deciphering the complex relationship between neuroanatomical connections and functional activity in primate brains remains a daunting task, especially regarding the influence of monosynaptic connectivity on cortical activity. Here, we investigate the anatomical-functional relationship and decompose the neuronal-tracing connectome of marmoset brains into a series of eigenmodes using graph signal processing. These cellular connectome eigenmodes effectively constrain the cortical activity derived from resting-state functional MRI, and uncover a patterned cellular-functional decoupling. This pattern reveals a spatial gradient from coupled dorsal-posterior to decoupled ventral-anterior cortices, and recapitulates micro-structural profiles and macro-scale hierarchical cortical organization. Notably, these marmoset-derived eigenmodes may facilitate the inference of spontaneous cortical activity and functional connectivity of homologous areas in humans, highlighting the potential generalizing of the connectomic constraints across species. Collectively, our findings illuminate how neuronal-tracing connectome eigenmodes constrain cortical activity and improve our understanding of the brain's anatomical-functional relationship.
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Affiliation(s)
- Jie Xia
- The Clinical Hospital of Chengdu Brain Science Institute, School of Life Science and Technology, University of Electronic Science and Technology of China, Chengdu, 611731, P.R. China
- MOE Key Lab for Neuroinformation, High-Field Magnetic Resonance Brain Imaging Key Laboratory of Sichuan Province, University of Electronic Science and Technology of China, Chengdu, 611731, P.R. China
| | - Cirong Liu
- Institute of Neuroscience, CAS Key Laboratory of Primate Neurobiology, Center for Excellence in Brain Science and Intelligence Technology, Chinese Academy of Sciences, Shanghai, 200031, P.R. China
| | - Jiao Li
- The Clinical Hospital of Chengdu Brain Science Institute, School of Life Science and Technology, University of Electronic Science and Technology of China, Chengdu, 611731, P.R. China
- MOE Key Lab for Neuroinformation, High-Field Magnetic Resonance Brain Imaging Key Laboratory of Sichuan Province, University of Electronic Science and Technology of China, Chengdu, 611731, P.R. China
| | - Yao Meng
- The Clinical Hospital of Chengdu Brain Science Institute, School of Life Science and Technology, University of Electronic Science and Technology of China, Chengdu, 611731, P.R. China
- MOE Key Lab for Neuroinformation, High-Field Magnetic Resonance Brain Imaging Key Laboratory of Sichuan Province, University of Electronic Science and Technology of China, Chengdu, 611731, P.R. China
| | - Siqi Yang
- School of Cybersecurity, Chengdu University of Information Technology, Chengdu, 610225, P.R. China
| | - Huafu Chen
- The Clinical Hospital of Chengdu Brain Science Institute, School of Life Science and Technology, University of Electronic Science and Technology of China, Chengdu, 611731, P.R. China.
- MOE Key Lab for Neuroinformation, High-Field Magnetic Resonance Brain Imaging Key Laboratory of Sichuan Province, University of Electronic Science and Technology of China, Chengdu, 611731, P.R. China.
| | - Wei Liao
- The Clinical Hospital of Chengdu Brain Science Institute, School of Life Science and Technology, University of Electronic Science and Technology of China, Chengdu, 611731, P.R. China.
- MOE Key Lab for Neuroinformation, High-Field Magnetic Resonance Brain Imaging Key Laboratory of Sichuan Province, University of Electronic Science and Technology of China, Chengdu, 611731, P.R. China.
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Feng G, Wang Y, Huang W, Chen H, Cheng J, Shu N. Spatial and temporal pattern of structure-function coupling of human brain connectome with development. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2023.09.11.557107. [PMID: 38559278 PMCID: PMC10979860 DOI: 10.1101/2023.09.11.557107] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Indexed: 04/04/2024]
Abstract
Brain structural circuitry shapes a richly patterned functional synchronization, supporting for complex cognitive and behavioural abilities. However, how coupling of structural connectome (SC) and functional connectome (FC) develops and its relationships with cognitive functions and transcriptomic architecture remain unclear. We used multimodal magnetic resonance imaging data from 439 participants aged 5.7 to 21.9 years to predict functional connectivity by incorporating intracortical and extracortical structural connectivity, characterizing SC-FC coupling. Our findings revealed that SC-FC coupling was strongest in the visual and somatomotor networks, consistent with evolutionary expansion, myelin content, and functional principal gradient. As development progressed, SC-FC coupling exhibited heterogeneous alterations dominated by an increase in cortical regions, broadly distributed across the somatomotor, frontoparietal, dorsal attention, and default mode networks. Moreover, we discovered that SC-FC coupling significantly predicted individual variability in general intelligence, mainly influencing frontoparietal and default mode networks. Finally, our results demonstrated that the heterogeneous development of SC-FC coupling is positively associated with genes in oligodendrocyte-related pathways and negatively associated with astrocyte-related genes. This study offers insight into the maturational principles of SC-FC coupling in typical development.
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Affiliation(s)
- Guozheng Feng
- State Key Laboratory of Cognitive Neuroscience and Learning & IDG/McGovern Institute for Brain Research, Beijing Normal University, Beijing, China
- BABRI Centre, Beijing Normal University, Beijing, China
- Beijing Key Laboratory of Brain Imaging and Connectomics, Beijing Normal University, Beijing, China
| | - Yiwen Wang
- State Key Laboratory of Cognitive Neuroscience and Learning & IDG/McGovern Institute for Brain Research, Beijing Normal University, Beijing, China
- BABRI Centre, Beijing Normal University, Beijing, China
- Beijing Key Laboratory of Brain Imaging and Connectomics, Beijing Normal University, Beijing, China
| | - Weijie Huang
- State Key Laboratory of Cognitive Neuroscience and Learning & IDG/McGovern Institute for Brain Research, Beijing Normal University, Beijing, China
- BABRI Centre, Beijing Normal University, Beijing, China
- Beijing Key Laboratory of Brain Imaging and Connectomics, Beijing Normal University, Beijing, China
| | - Haojie Chen
- State Key Laboratory of Cognitive Neuroscience and Learning & IDG/McGovern Institute for Brain Research, Beijing Normal University, Beijing, China
- BABRI Centre, Beijing Normal University, Beijing, China
- Beijing Key Laboratory of Brain Imaging and Connectomics, Beijing Normal University, Beijing, China
| | - Jian Cheng
- School of Computer Science and Engineering, Beihang University, Beijing, China
| | - Ni Shu
- State Key Laboratory of Cognitive Neuroscience and Learning & IDG/McGovern Institute for Brain Research, Beijing Normal University, Beijing, China
- BABRI Centre, Beijing Normal University, Beijing, China
- Beijing Key Laboratory of Brain Imaging and Connectomics, Beijing Normal University, Beijing, China
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Xu M, Li X, Teng T, Huang Y, Liu M, Long Y, Lv F, Zhi D, Li X, Feng A, Yu S, Calhoun V, Zhou X, Sui J. Reconfiguration of Structural and Functional Connectivity Coupling in Patient Subgroups With Adolescent Depression. JAMA Netw Open 2024; 7:e241933. [PMID: 38470418 PMCID: PMC10933730 DOI: 10.1001/jamanetworkopen.2024.1933] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 03/13/2024] Open
Abstract
Importance Adolescent major depressive disorder (MDD) is associated with serious adverse implications for brain development and higher rates of self-injury and suicide, raising concerns about its neurobiological mechanisms in clinical neuroscience. However, most previous studies regarding the brain alterations in adolescent MDD focused on single-modal images or analyzed images of different modalities separately, ignoring the potential role of aberrant interactions between brain structure and function in the psychopathology. Objective To examine alterations of structural and functional connectivity (SC-FC) coupling in adolescent MDD by integrating both diffusion magnetic resonance imaging (MRI) and resting-state functional MRI data. Design, Setting, and Participants This cross-sectional study recruited participants aged 10 to 18 years from January 2, 2020, to December 28, 2021. Patients with first-episode MDD were recruited from the outpatient psychiatry clinics at The First Affiliated Hospital of Chongqing Medical University. Healthy controls were recruited by local media advertisement from the general population in Chongqing, China. The sample was divided into 5 subgroup pairs according to different environmental stressors and clinical characteristics. Data were analyzed from January 10, 2022, to February 20, 2023. Main Outcomes and Measures The SC-FC coupling was calculated for each brain region of each participant using whole-brain SC and FC. Primary analyses included the group differences in SC-FC coupling and clinical symptom associations between SC-FC coupling and participants with adolescent MDD and healthy controls. Secondary analyses included differences among 5 types of MDD subgroups: with or without suicide attempt, with or without nonsuicidal self-injury behavior, with or without major life events, with or without childhood trauma, and with or without school bullying. Results Final analyses examined SC-FC coupling of 168 participants with adolescent MDD (mean [mean absolute deviation (MAD)] age, 16.0 [1.7] years; 124 females [73.8%]) and 101 healthy controls (mean [MAD] age, 15.1 [2.4] years; 61 females [60.4%]). Adolescent MDD showed increased SC-FC coupling in the visual network, default mode network, and insula (Cohen d ranged from 0.365 to 0.581; false discovery rate [FDR]-corrected P < .05). Some subgroup-specific alterations were identified via subgroup analyses, particularly involving parahippocampal coupling decrease in participants with suicide attempt (partial η2 = 0.069; 90% CI, 0.025-0.121; FDR-corrected P = .007) and frontal-limbic coupling increase in participants with major life events (partial η2 ranged from 0.046 to 0.068; FDR-corrected P < .05). Conclusions and Relevance Results of this cross-sectional study suggest increased SC-FC coupling in adolescent MDD, especially involving hub regions of the default mode network, visual network, and insula. The findings enrich knowledge of the aberrant brain SC-FC coupling in the psychopathology of adolescent MDD, underscoring the vulnerability of frontal-limbic SC-FC coupling to external stressors and the parahippocampal coupling in shaping future-minded behavior.
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Affiliation(s)
- Ming Xu
- Brainnetome Center and National Laboratory of Pattern Recognition, Institute of Automation, Chinese Academy of Sciences, Beijing, China
- School of Artificial Intelligence, University of Chinese Academy of Sciences, Beijing, China
| | - Xuemei Li
- Department of Psychiatry, The First Affiliated Hospital of Chongqing Medical University, Chongqing, China
| | - Teng Teng
- Department of Psychiatry, The First Affiliated Hospital of Chongqing Medical University, Chongqing, China
| | - Yang Huang
- Department of Radiology, The First Affiliated Hospital of Chongqing Medical University, Chongqing, China
| | - Mengqi Liu
- Department of Radiology, The First Affiliated Hospital of Chongqing Medical University, Chongqing, China
| | - Yicheng Long
- Department of Psychiatry and National Clinical Research Center for Mental Disorders, The Second Xiangya Hospital of Central South University, Hunan, China
| | - Fajin Lv
- Department of Radiology, The First Affiliated Hospital of Chongqing Medical University, Chongqing, China
| | - Dongmei Zhi
- International Data Group (IDG)/McGovern Institute for Brain Research, State Key Laboratory of Cognitive Neuroscience and Learning, Beijing Normal University, Beijing, China
| | - Xiang Li
- Brainnetome Center and National Laboratory of Pattern Recognition, Institute of Automation, Chinese Academy of Sciences, Beijing, China
- School of Artificial Intelligence, University of Chinese Academy of Sciences, Beijing, China
| | - Aichen Feng
- Brainnetome Center and National Laboratory of Pattern Recognition, Institute of Automation, Chinese Academy of Sciences, Beijing, China
- School of Artificial Intelligence, University of Chinese Academy of Sciences, Beijing, China
| | - Shan Yu
- Brainnetome Center and National Laboratory of Pattern Recognition, Institute of Automation, Chinese Academy of Sciences, Beijing, China
- School of Artificial Intelligence, University of Chinese Academy of Sciences, Beijing, China
| | - Vince Calhoun
- Tri-institutional Center for Translational Research in Neuroimaging and Data Science (TReNDS), Georgia Institute of Technology, Emory University and Georgia State University, Atlanta, Georgia
| | - Xinyu Zhou
- Department of Psychiatry, The First Affiliated Hospital of Chongqing Medical University, Chongqing, China
| | - Jing Sui
- International Data Group (IDG)/McGovern Institute for Brain Research, State Key Laboratory of Cognitive Neuroscience and Learning, Beijing Normal University, Beijing, China
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Tuckute G, Sathe A, Srikant S, Taliaferro M, Wang M, Schrimpf M, Kay K, Fedorenko E. Driving and suppressing the human language network using large language models. Nat Hum Behav 2024; 8:544-561. [PMID: 38172630 DOI: 10.1038/s41562-023-01783-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/06/2023] [Accepted: 11/10/2023] [Indexed: 01/05/2024]
Abstract
Transformer models such as GPT generate human-like language and are predictive of human brain responses to language. Here, using functional-MRI-measured brain responses to 1,000 diverse sentences, we first show that a GPT-based encoding model can predict the magnitude of the brain response associated with each sentence. We then use the model to identify new sentences that are predicted to drive or suppress responses in the human language network. We show that these model-selected novel sentences indeed strongly drive and suppress the activity of human language areas in new individuals. A systematic analysis of the model-selected sentences reveals that surprisal and well-formedness of linguistic input are key determinants of response strength in the language network. These results establish the ability of neural network models to not only mimic human language but also non-invasively control neural activity in higher-level cortical areas, such as the language network.
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Affiliation(s)
- Greta Tuckute
- Department of Brain and Cognitive Sciences, Massachusetts Institute of Technology, Cambridge, MA, USA.
- McGovern Institute for Brain Research, Massachusetts Institute of Technology, Cambridge, MA, USA.
| | - Aalok Sathe
- Department of Brain and Cognitive Sciences, Massachusetts Institute of Technology, Cambridge, MA, USA
- McGovern Institute for Brain Research, Massachusetts Institute of Technology, Cambridge, MA, USA
| | - Shashank Srikant
- Computer Science & Artificial Intelligence Laboratory, Massachusetts Institute of Technology, Cambridge, MA, USA
- MIT-IBM Watson AI Lab, Cambridge, MA, USA
| | - Maya Taliaferro
- Department of Brain and Cognitive Sciences, Massachusetts Institute of Technology, Cambridge, MA, USA
- McGovern Institute for Brain Research, Massachusetts Institute of Technology, Cambridge, MA, USA
| | - Mingye Wang
- Department of Brain and Cognitive Sciences, Massachusetts Institute of Technology, Cambridge, MA, USA
- McGovern Institute for Brain Research, Massachusetts Institute of Technology, Cambridge, MA, USA
| | - Martin Schrimpf
- McGovern Institute for Brain Research, Massachusetts Institute of Technology, Cambridge, MA, USA
- Quest for Intelligence, Massachusetts Institute of Technology, Cambridge, MA, USA
- Neuro-X Institute, École Polytechnique Fédérale de Lausanne, Lausanne, Switzerland
| | - Kendrick Kay
- Center for Magnetic Resonance Research, University of Minnesota, Minneapolis, MN, USA
| | - Evelina Fedorenko
- Department of Brain and Cognitive Sciences, Massachusetts Institute of Technology, Cambridge, MA, USA.
- McGovern Institute for Brain Research, Massachusetts Institute of Technology, Cambridge, MA, USA.
- Program in Speech and Hearing Bioscience and Technology, Harvard University, Cambridge, MA, USA.
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46
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Wu J, Ma L, Luo D, Jin Z, Wang L, Wang L, Li T, Zhang J, Liu T, Lv D, Yan T, Fang B. Functional and structural gradients reveal atypical hierarchical organization of Parkinson's disease. Hum Brain Mapp 2024; 45:e26647. [PMID: 38488448 PMCID: PMC10941507 DOI: 10.1002/hbm.26647] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/28/2023] [Revised: 02/02/2024] [Accepted: 02/18/2024] [Indexed: 03/18/2024] Open
Abstract
Parkinson's disease (PD) patients exhibit deficits in primary sensorimotor and higher-order executive functions. The gradient reflects the functional spectrum in sensorimotor-associated areas of the brain. We aimed to determine whether the gradient is disrupted in PD patients and how this disruption is associated with treatment outcome. Seventy-six patients (mean age, 59.2 ± 12.4 years [standard deviation], 44 women) and 34 controls participants (mean age, 58.1 ± 10.0 years [standard deviation], 19 women) were evaluated. We explored functional and structural gradients in PD patients and control participants. Patients were followed during 2 weeks of multidisciplinary intensive rehabilitation therapy (MIRT). The Unified Parkinson's Disease Rating Scale Part III (UPDRS-III) was administered to patients before and after treatment. We investigated PD-related alterations in the principal functional and structural gradients. We further used a support vector machine (SVM) and correlation analysis to assess the classification ability and treatment outcomes related to PD gradient alterations, respectively. The gradients showed significant differences between patients and control participants, mainly in somatosensory and visual networks involved in primary function, and higher-level association networks (dorsal attentional network (DAN) and default mode network (DMN)) related to motor control and execution. On the basis of the combined functional and structural gradient features of these networks, the SVM achieved an accuracy of 91.2% in discriminating patients from control participants. Treatment reduced the gradient difference. The altered gradient exhibited a significant correlation with motor improvement and was mainly distributed across the visual network, DAN and DMN. This study revealed damage to gradients in the brain characterized by sensorimotor and executive control deficits in PD patients. The application of gradient features to neurological disorders could lead to the development of potential diagnostic and treatment markers for PD.
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Affiliation(s)
- Jinglong Wu
- School of Mechatronical Engineering, Beijing Institute of TechnologyBeijingChina
| | - Lihua Ma
- School of Mechatronical Engineering, Beijing Institute of TechnologyBeijingChina
| | - Di Luo
- School of Mechatronical Engineering, Beijing Institute of TechnologyBeijingChina
| | - Zhaohui Jin
- Parkinson Medical Center, Beijing Rehabilitation Hospital, Capital Medical UniversityBeijingChina
| | - Li Wang
- School of Life Science, Beijing Institute of TechnologyBeijingChina
| | - Luyao Wang
- School of Life Science, Shanghai UniversityShanghaiChina
| | - Ting Li
- School of Life Science, Beijing Institute of TechnologyBeijingChina
| | - Jian Zhang
- School of Mechatronical Engineering, Beijing Institute of TechnologyBeijingChina
| | - Tiantian Liu
- School of Life Science, Beijing Institute of TechnologyBeijingChina
| | - Diyang Lv
- Parkinson Medical Center, Beijing Rehabilitation Hospital, Capital Medical UniversityBeijingChina
| | - Tianyi Yan
- School of Life Science, Beijing Institute of TechnologyBeijingChina
| | - Boyan Fang
- Parkinson Medical Center, Beijing Rehabilitation Hospital, Capital Medical UniversityBeijingChina
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47
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Gao K, He H, Lu B, Xie Q, Lu J, Yao D, Luo C, Li G. Discrepant changes in structure-function coupling in dancers and musicians. Cereb Cortex 2024; 34:bhae068. [PMID: 38489785 DOI: 10.1093/cercor/bhae068] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/30/2023] [Revised: 02/02/2024] [Accepted: 02/07/2024] [Indexed: 03/17/2024] Open
Abstract
Dance and music are well known to improve sensorimotor skills and cognitive functions. To reveal the underlying mechanism, previous studies focus on the brain plastic structural and functional effects of dance and music training. However, the discrepancy training effects on brain structure-function relationship are still blurred. Thus, proficient dancers, musicians, and controls were recruited in this study. The graph signal processing framework was employed to quantify the region-level and network-level relationship between brain function and structure. The results showed the increased coupling strength of the right ventromedial putamen in the dance and music groups. Distinctly, enhanced coupling strength of the ventral attention network, increased coupling strength of the right inferior frontal gyrus opercular area, and increased function connectivity of coupling function signal between the right and left middle frontal gyrus were only found in the dance group. Besides, the dance group indicated enhanced coupling function connectivity between the left inferior parietal lobule caudal area and the left superior parietal lobule intraparietal area compared with the music groups. The results might illustrate dance and music training's discrepant effect on the structure-function relationship of the subcortical and cortical attention networks. Furthermore, dance training seemed to have a greater impact on these networks.
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Affiliation(s)
- Kexin Gao
- School of Life Science and Technology, MOE Key Lab for Neuroinformation, Center for Information in Medicine, The Clinical Hospital of Chengdu Brain Science Institute, University of Electronic Science and Technology of China, Xiyuan Ave, West Hi-Tech Zone, Sichuan 611731, China
| | - Hui He
- School of Life Science and Technology, MOE Key Lab for Neuroinformation, Center for Information in Medicine, The Clinical Hospital of Chengdu Brain Science Institute, University of Electronic Science and Technology of China, Xiyuan Ave, West Hi-Tech Zone, Sichuan 611731, China
| | - Bao Lu
- School of Life Science and Technology, MOE Key Lab for Neuroinformation, Center for Information in Medicine, The Clinical Hospital of Chengdu Brain Science Institute, University of Electronic Science and Technology of China, Xiyuan Ave, West Hi-Tech Zone, Sichuan 611731, China
| | - Qiushui Xie
- Beijing Dance Academy, Wanshousi Road, Haidian District, Beijing, 100081, China
| | - Jing Lu
- School of Life Science and Technology, MOE Key Lab for Neuroinformation, Center for Information in Medicine, The Clinical Hospital of Chengdu Brain Science Institute, University of Electronic Science and Technology of China, Xiyuan Ave, West Hi-Tech Zone, Sichuan 611731, China
| | - Dezhong Yao
- School of Life Science and Technology, MOE Key Lab for Neuroinformation, Center for Information in Medicine, The Clinical Hospital of Chengdu Brain Science Institute, University of Electronic Science and Technology of China, Xiyuan Ave, West Hi-Tech Zone, Sichuan 611731, China
| | - Cheng Luo
- School of Life Science and Technology, MOE Key Lab for Neuroinformation, Center for Information in Medicine, The Clinical Hospital of Chengdu Brain Science Institute, University of Electronic Science and Technology of China, Xiyuan Ave, West Hi-Tech Zone, Sichuan 611731, China
| | - Gujing Li
- School of Life Science and Technology, MOE Key Lab for Neuroinformation, Center for Information in Medicine, The Clinical Hospital of Chengdu Brain Science Institute, University of Electronic Science and Technology of China, Xiyuan Ave, West Hi-Tech Zone, Sichuan 611731, China
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48
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Jimenez-Marin A, Diez I, Erramuzpe A, Stramaglia S, Bonifazi P, Cortes JM. Open datasets and code for multi-scale relations on structure, function and neuro-genetics in the human brain. Sci Data 2024; 11:256. [PMID: 38424112 PMCID: PMC10904384 DOI: 10.1038/s41597-024-03060-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/10/2023] [Accepted: 02/12/2024] [Indexed: 03/02/2024] Open
Abstract
The human brain is an extremely complex network of structural and functional connections that operate at multiple spatial and temporal scales. Investigating the relationship between these multi-scale connections is critical to advancing our comprehension of brain function and disorders. However, accurately predicting structural connectivity from its functional counterpart remains a challenging pursuit. One of the major impediments is the lack of public repositories that integrate structural and functional networks at diverse resolutions, in conjunction with modular transcriptomic profiles, which are essential for comprehensive biological interpretation. To mitigate this limitation, our contribution encompasses the provision of an open-access dataset consisting of derivative matrices of functional and structural connectivity across multiple scales, accompanied by code that facilitates the investigation of their interrelations. We also provide additional resources focused on neuro-genetic associations of module-level network metrics, which present promising opportunities to further advance research in the field of network neuroscience, particularly concerning brain disorders.
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Affiliation(s)
- Antonio Jimenez-Marin
- Computational Neuroimaging Lab, Biobizkaia HRI, Barakaldo, Spain
- Biomedical Research Doctorate Program, University of the Basque Country (UPV/EHU), Leioa, Spain
| | - Ibai Diez
- Department of Radiology, Division of Nuclear Medicine and Molecular Imaging, Massachusetts General Hospital and Harvard Medical School, Boston, United States of America
- Gordon Center for Medical Imaging, Department of Radiology, Massachusetts General Hospital and Harvard Medical School, Boston, United States of America
- Athinoula A. Martinos Center for Biomedical Imaging, Massachusetts General Hospital, Harvard Medical School, Boston, United States of America
| | - Asier Erramuzpe
- Computational Neuroimaging Lab, Biobizkaia HRI, Barakaldo, Spain
- IKERBASQUE Basque Foundation for Science, Bilbao, Spain
| | - Sebastiano Stramaglia
- Dipartamento Interateneo di Fisica, Universita Degli Studi di Bari Aldo Moro, INFN, Bari, Italy
| | - Paolo Bonifazi
- Computational Neuroimaging Lab, Biobizkaia HRI, Barakaldo, Spain
- IKERBASQUE Basque Foundation for Science, Bilbao, Spain
| | - Jesus M Cortes
- Computational Neuroimaging Lab, Biobizkaia HRI, Barakaldo, Spain.
- IKERBASQUE Basque Foundation for Science, Bilbao, Spain.
- Department of Cell Biology and Histology, University of the Basque Country (UPV/EHU), Leioa, Spain.
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49
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Betzel R, Puxeddu MG, Seguin C, Bazinet V, Luppi A, Podschun A, Singleton SP, Faskowitz J, Parakkattu V, Misic B, Markett S, Kuceyeski A, Parkes L. Controlling the human connectome with spatially diffuse input signals. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2024.02.27.581006. [PMID: 38463980 PMCID: PMC10925126 DOI: 10.1101/2024.02.27.581006] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 03/12/2024]
Abstract
The human brain is never at "rest"; its activity is constantly fluctuating over time, transitioning from one brain state-a whole-brain pattern of activity-to another. Network control theory offers a framework for understanding the effort - energy - associated with these transitions. One branch of control theory that is especially useful in this context is "optimal control", in which input signals are used to selectively drive the brain into a target state. Typically, these inputs are introduced independently to the nodes of the network (each input signal is associated with exactly one node). Though convenient, this input strategy ignores the continuity of cerebral cortex - geometrically, each region is connected to its spatial neighbors, allowing control signals, both exogenous and endogenous, to spread from their foci to nearby regions. Additionally, the spatial specificity of brain stimulation techniques is limited, such that the effects of a perturbation are measurable in tissue surrounding the stimulation site. Here, we adapt the network control model so that input signals have a spatial extent that decays exponentially from the input site. We show that this more realistic strategy takes advantage of spatial dependencies in structural connectivity and activity to reduce the energy (effort) associated with brain state transitions. We further leverage these dependencies to explore near-optimal control strategies such that, on a per-transition basis, the number of input signals required for a given control task is reduced, in some cases by two orders of magnitude. This approximation yields network-wide maps of input site density, which we compare to an existing database of functional, metabolic, genetic, and neurochemical maps, finding a close correspondence. Ultimately, not only do we propose a more efficient framework that is also more adherent to well-established brain organizational principles, but we also posit neurobiologically grounded bases for optimal control.
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Affiliation(s)
- Richard Betzel
- Department of Psychological and Brain Sciences, Indiana University, Bloomington IN 47401
- Cognitive Science Program, Indiana University, Bloomington IN 47401
- Program in Neuroscience, Indiana University, Bloomington IN 47401
| | - Maria Grazia Puxeddu
- Department of Psychological and Brain Sciences, Indiana University, Bloomington IN 47401
| | - Caio Seguin
- Department of Psychological and Brain Sciences, Indiana University, Bloomington IN 47401
| | - Vincent Bazinet
- Montréal Neurological Institute, McGill University, Montréal, QC, Canada
| | - Andrea Luppi
- Montréal Neurological Institute, McGill University, Montréal, QC, Canada
| | | | | | - Joshua Faskowitz
- Department of Psychological and Brain Sciences, Indiana University, Bloomington IN 47401
| | - Vibin Parakkattu
- Department of Psychological and Brain Sciences, Indiana University, Bloomington IN 47401
- Cognitive Science Program, Indiana University, Bloomington IN 47401
| | - Bratislav Misic
- Montréal Neurological Institute, McGill University, Montréal, QC, Canada
| | | | - Amy Kuceyeski
- Department of Radiology, Weill Cornell Medicine, New York, NY
- Department of Computational Biology, Cornell University, Ithaca, NY
| | - Linden Parkes
- Department of Psychiatry, Brain Health Institute, Rutgers University, Piscataway, NJ, USA
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50
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Xie Y, Li C, Guan M, Zhang T, Ma C, Wang Z, Ma Z, Wang H, Fang P. Low-frequency rTMS induces modifications in cortical structural connectivity - functional connectivity coupling in schizophrenia patients with auditory verbal hallucinations. Hum Brain Mapp 2024; 45:e26614. [PMID: 38375980 PMCID: PMC10878014 DOI: 10.1002/hbm.26614] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/17/2023] [Revised: 01/09/2024] [Accepted: 01/19/2024] [Indexed: 02/21/2024] Open
Abstract
Auditory verbal hallucinations (AVH) are distinctive clinical manifestations of schizophrenia. While low-frequency repetitive transcranial magnetic stimulation (rTMS) has demonstrated potential in mitigating AVH, the precise mechanisms by which it operates remain obscure. This study aimed to investigate alternations in structural connectivity and functional connectivity (SC-FC) coupling among schizophrenia patients with AVH prior to and following treatment with 1 Hz rTMS that specifically targets the left temporoparietal junction. Initially, patients exhibited significantly reduced macroscopic whole brain level SC-FC coupling compared to healthy controls. Notably, SC-FC coupling increased significantly across multiple networks, including the somatomotor, dorsal attention, ventral attention, frontoparietal control, and default mode networks, following rTMS treatment. Significant alternations in SC-FC coupling were noted in critical nodes comprising the somatomotor network and the default mode network, such as the precentral gyrus and the ventromedial prefrontal cortex, respectively. The alternations in SC-FC coupling exhibited a correlation with the amelioration of clinical symptom. The results of our study illuminate the intricate relationship between white matter structures and neuronal activity in patients who are receiving low-frequency rTMS. This advances our understanding of the foundational mechanisms underlying rTMS treatment for AVH.
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Affiliation(s)
- Yuanjun Xie
- Military Medical Psychology SchoolFourth Military Medical UniversityXi'anChina
- Department of Radiology, Xijing HospitalFourth Military Medical UniversityXi'anChina
| | - Chenxi Li
- Military Medical Psychology SchoolFourth Military Medical UniversityXi'anChina
| | - Muzhen Guan
- Department of Mental HealthXi'an Medical CollegeXi'anChina
| | - Tian Zhang
- Military Medical Psychology SchoolFourth Military Medical UniversityXi'anChina
| | - Chaozong Ma
- Military Medical Psychology SchoolFourth Military Medical UniversityXi'anChina
| | - Zhongheng Wang
- Department of Psychiatry, Xijing HospitalFourth Military Medical UniversityXi'anChina
| | - Zhujing Ma
- Military Medical Psychology SchoolFourth Military Medical UniversityXi'anChina
| | - Huaning Wang
- Department of Psychiatry, Xijing HospitalFourth Military Medical UniversityXi'anChina
| | - Peng Fang
- Military Medical Psychology SchoolFourth Military Medical UniversityXi'anChina
- Shaanxi Provincial Key Laboratory of Bioelectromagnetic Detection and Intelligent PerceptionXi'anChina
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