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Dixon RA, Puente-Urbina A, Beckham GT, Román-Leshkov Y. Enabling Lignin Valorization Through Integrated Advances in Plant Biology and Biorefining. ANNUAL REVIEW OF PLANT BIOLOGY 2024; 75:239-263. [PMID: 39038247 DOI: 10.1146/annurev-arplant-062923-022602] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 07/24/2024]
Abstract
Despite lignin having long been viewed as an impediment to the processing of biomass for the production of paper, biofuels, and high-value chemicals, the valorization of lignin to fuels, chemicals, and materials is now clearly recognized as a critical element for the lignocellulosic bioeconomy. However, the intended application for lignin will likely require a preferred lignin composition and form. To that end, effective lignin valorization will require the integration of plant biology, providing optimal feedstocks, with chemical process engineering, providing efficient lignin transformations. Recent advances in our understanding of lignin biosynthesis have shown that lignin structure is extremely diverse and potentially tunable, while simultaneous developments in lignin refining have resulted in the development of several processes that are more agnostic to lignin composition. Here, we review the interface between in planta lignin design and lignin processing and discuss the advances necessary for lignin valorization to become a feature of advanced biorefining.
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Affiliation(s)
- Richard A Dixon
- BioDiscovery Institute and Department of Biological Sciences, University of North Texas, Denton, Texas, USA;
- Center for Bioenergy Innovation (CBI), Oak Ridge National Laboratory, Oak Ridge, Tennessee, USA
| | - Allen Puente-Urbina
- Renewable Resources and Enabling Sciences Center, National Renewable Energy Laboratory, Golden, Colorado, USA
| | - Gregg T Beckham
- Center for Bioenergy Innovation (CBI), Oak Ridge National Laboratory, Oak Ridge, Tennessee, USA
- Renewable Resources and Enabling Sciences Center, National Renewable Energy Laboratory, Golden, Colorado, USA
| | - Yuriy Román-Leshkov
- Department of Chemical Engineering, Massachusetts Institute of Technology, Cambridge, Massachusetts, USA
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Umezawa T. Metabolic engineering of Oryza sativa for lignin augmentation and structural simplification. PLANT BIOTECHNOLOGY (TOKYO, JAPAN) 2024; 41:89-101. [PMID: 39463768 PMCID: PMC11500570 DOI: 10.5511/plantbiotechnology.24.0131a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 12/29/2023] [Accepted: 01/31/2024] [Indexed: 10/29/2024]
Abstract
The sustainable production and utilization of lignocellulose biomass are indispensable for establishing sustainable societies. Trees and large-sized grasses are the major sources of lignocellulose biomass, while large-sized grasses greatly surpass trees in terms of lignocellulose biomass productivity. With an overall aim to improve lignocellulose usability, it is important to increase the lignin content and simplify lignin structures in biomass plants via lignin metabolic engineering. Rice (Oryza sativa) is not only a representative and important grass crop, but also is a model for large-sized grasses in biotechnology. This review outlines progress in lignin metabolic engineering in grasses, mainly rice, including characterization of the lignocellulose properties, the augmentation of lignin content and the simplification of lignin structures. These findings have broad applicability for the metabolic engineering of lignin in large-sized grass biomass plants.
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Affiliation(s)
- Toshiaki Umezawa
- Research Institute for Sustainable Humanosphere, Kyoto University
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53
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Christoph E, Yu L, Newby SD, Rivera Orsini MA, Scroggins J, Keffer DJ, Harper DP, Dhar M. Novel Kraft Softwood Lignin-Derived Carbon Quantum Dots: Synthesis, Characterization, and In Vitro Cytocompatibility. NANOMATERIALS (BASEL, SWITZERLAND) 2024; 14:1029. [PMID: 38921905 PMCID: PMC11206522 DOI: 10.3390/nano14121029] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/10/2024] [Revised: 06/06/2024] [Accepted: 06/08/2024] [Indexed: 06/27/2024]
Abstract
Carbon quantum dots (CQDs) have been investigated for biomedical applications in medical imaging due to their fluorescent properties, overall long-term stability, and excellent cytocompatibility and biocompatibility. Lignin is an organic polymer in the tissues of woody plants. It is also considered a byproduct of the wood and pulp industries. Hence, it presents as a renewable source of carbon nanoparticles. In this study, we report the synthesis and material and biological characterization of two colloidal suspensions of CQDs in water derived from lignin-based carbon. One was the native form of CQDs derived from lignin carbon, and the second was doped with nitrogen to evaluate material differences. Material characterization was carried out using various commonly used techniques, including Fourier transform infrared spectroscopy (FTIR), emission and absorbance spectra, zeta potential, transmission electron microscopy (TEM), and scanning electron microscopy (SEM). Thin films of CQDs were formed on glass and silicon substrates to assess the in vitro cytocompatibility with human mesenchymal stem cells (hMSCs). Observations suggest that the two forms of CQDs promote cell attachment within 24 h and sustain it for at least 7 days. The overall structure and shape of cells suggest a lack of any adverse or toxic effects of CQDs. The data lay down the novel foundation to support the use of lignin-derived CQDs in tissue engineering applications.
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Affiliation(s)
- Eli Christoph
- Material Science and Engineering, University of Tennessee, Knoxville, TN 37996, USA; (E.C.); (L.Y.); (J.S.); (D.J.K.)
- Tissue Engineering and Regenerative Medicine, Large Animal Clinical Sciences, College of Veterinary Medicine, University of Tennessee, Knoxville, TN 37996, USA; (S.D.N.); (M.A.R.O.)
| | - Lu Yu
- Material Science and Engineering, University of Tennessee, Knoxville, TN 37996, USA; (E.C.); (L.Y.); (J.S.); (D.J.K.)
| | - Steven D. Newby
- Tissue Engineering and Regenerative Medicine, Large Animal Clinical Sciences, College of Veterinary Medicine, University of Tennessee, Knoxville, TN 37996, USA; (S.D.N.); (M.A.R.O.)
| | - Michael A. Rivera Orsini
- Tissue Engineering and Regenerative Medicine, Large Animal Clinical Sciences, College of Veterinary Medicine, University of Tennessee, Knoxville, TN 37996, USA; (S.D.N.); (M.A.R.O.)
| | - Jakob Scroggins
- Material Science and Engineering, University of Tennessee, Knoxville, TN 37996, USA; (E.C.); (L.Y.); (J.S.); (D.J.K.)
| | - David J. Keffer
- Material Science and Engineering, University of Tennessee, Knoxville, TN 37996, USA; (E.C.); (L.Y.); (J.S.); (D.J.K.)
| | - David P. Harper
- Center for Renewable Carbon, School for Natural Resources, University of Tennessee, Knoxville, TN 37996, USA;
| | - Madhu Dhar
- Tissue Engineering and Regenerative Medicine, Large Animal Clinical Sciences, College of Veterinary Medicine, University of Tennessee, Knoxville, TN 37996, USA; (S.D.N.); (M.A.R.O.)
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54
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Ganguly S, Kelland MA, Ellis RJ, Andresen M, Subramanian S, Theodossiou A. Sustainable Calcite Scale Inhibitors via Oxidation of Lignosulfonates. ACS OMEGA 2024; 9:25162-25171. [PMID: 38882098 PMCID: PMC11170713 DOI: 10.1021/acsomega.4c02716] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 03/20/2024] [Revised: 05/13/2024] [Accepted: 05/17/2024] [Indexed: 06/18/2024]
Abstract
Deposition of inorganic scales in wells, flow lines, and equipment is a major problem in the water treatment, geothermal, or upstream oil and gas industries. Deployment of scale inhibitors has been adopted worldwide for oilfield scale prevention. Commercial synthetic scale inhibitors such as polymeric carboxylates and sulfonates or nonpolymeric phosphonates offer good scale inhibition performance but often suffer from one or more limitations including biodegradability, calcium compatibility, and thermal stability. Lignin-based biomaterials such as sodium lignosulfonates are natural, sustainable, and widely available polymers that are accepted for use in environmentally sensitive areas. Here we show that, although lignosulfonates perform relatively poorly as calcite scale inhibitors in dynamic tube blocking tests, oxidized lignosulfonates show a much improved inhibition effect by a factor of 20-fold. The oxidized lignosulfonates are easy to prepare in a 1-step reaction and show excellent calcium compatibility and thermal stability, useful for downhole squeeze treatments in high temperature wells. This present study unequivocally establishes oxidized lignosulfonates as a new class of sustainable green scale inhibitors, thereby bridging the gap between materials derived directly from nature and the classic synthetic polymeric scale inhibitors.
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Affiliation(s)
- Sumit Ganguly
- Department of Chemistry, Bioscience and Environmental Engineering, Faculty of Science and Technology, University of Stavanger, N-4036 Stavanger, Norway
- Borregaard AS, Hjalmar Wessels vei 6, 1721 Sarpsborg, Norway
| | - Malcolm A Kelland
- Department of Chemistry, Bioscience and Environmental Engineering, Faculty of Science and Technology, University of Stavanger, N-4036 Stavanger, Norway
| | - Ross J Ellis
- Borregaard AS, Hjalmar Wessels vei 6, 1721 Sarpsborg, Norway
| | - Martin Andresen
- Borregaard AS, Hjalmar Wessels vei 6, 1721 Sarpsborg, Norway
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55
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Cao P, Li Y, Shao J. Experimental Study on the Preparation of Lignin-Based Activated Carbon and the Adsorption Performance for Phenol. ACS OMEGA 2024; 9:24453-24463. [PMID: 38882099 PMCID: PMC11170647 DOI: 10.1021/acsomega.4c00352] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 01/10/2024] [Revised: 05/08/2024] [Accepted: 05/14/2024] [Indexed: 06/18/2024]
Abstract
Biomass waste and wastewater are important wastes in the process of industrialization, which need to be effectively treated and utilized. In this work, an innovative method of collaborative treatment of biomass waste and phenol-containing wastewater is proposed. Biomass waste was used to produce activated carbon (AC), and then AC was used for phenol removal in wastewater treatment. Two kinds of typical biomass waste material, namely, coconut shell and lignin, were used. Physical activation (steam activation) and chemical activation methods were compared. Results show that steam activation is an effective method for coconut shell AC production. The largest Brunauer-Emmett-Teller (BET) surface area was 1065 m2/g at 800 °C. Chemical activation could produce AC samples with higher BET specific surface area. The lignin AC with K2CO3 activation has the largest BET surface of 1723.8 m2/g at 800 °C. FTIR results indicated that K2CO3 activation could greatly enhance the formation of surface oxygen-containing functional groups. Both coconut shell AC and lignin AC samples show excellent performance for phenol removal. The highest phenol removal efficiency for coconut shell AC and lignin AC are 96.87% and 98.22%, respectively. Adsorption kinetic analysis show that the pseudo-first-order kinetic model is able to describe the adsorption characteristics of phenol in wastewater treatment. Recycling properties show that regeneration of lignin AC could maintain high adsorption performance for phenol.
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Affiliation(s)
- Ping Cao
- School of Chemistry and Environmental Engineering, Shanghai Institute of Technology, Shanghai 201418, China
| | - Yuting Li
- School of Chemistry and Environmental Engineering, Shanghai Institute of Technology, Shanghai 201418, China
| | - Jingli Shao
- Shanghai Composite Material Science & Technology Co., Ltd., Shanghai 201112, China
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56
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Meriläinen E, Efimova E, Santala V, Santala S. Carbon-wise utilization of lignin-related compounds by synergistically employing anaerobic and aerobic bacteria. BIOTECHNOLOGY FOR BIOFUELS AND BIOPRODUCTS 2024; 17:78. [PMID: 38851749 PMCID: PMC11161944 DOI: 10.1186/s13068-024-02526-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/27/2024] [Accepted: 05/30/2024] [Indexed: 06/10/2024]
Abstract
BACKGROUND Lignin is a highly abundant but strongly underutilized natural resource that could serve as a sustainable feedstock for producing chemicals by microbial cell factories. Because of the heterogeneous nature of the lignin feedstocks, the biological upgrading of lignin relying on the metabolic routes of aerobic bacteria is currently considered as the most promising approach. However, the limited substrate range and the inefficient catabolism of the production hosts hinder the upgrading of lignin-related aromatics. Particularly, the aerobic O-demethylation of the methoxyl groups in aromatic substrates is energy-limited, inhibits growth, and results in carbon loss in the form of CO2. RESULTS In this study, we present a novel approach for carbon-wise utilization of lignin-related aromatics by the integration of anaerobic and aerobic metabolisms. In practice, we employed an acetogenic bacterium Acetobacterium woodii for anaerobic O-demethylation of aromatic compounds, which distinctively differs from the aerobic O-demethylation; in the process, the carbon from the methoxyl groups is fixed together with CO2 to form acetate, while the aromatic ring remains unchanged. These accessible end-metabolites were then utilized by an aerobic bacterium Acinetobacter baylyi ADP1. By utilizing this cocultivation approach, we demonstrated an upgrading of guaiacol, an abundant but inaccessible substrate to most microbes, into a plastic precursor muconate, with a nearly equimolar yields (0.9 mol/mol in a small-scale cultivation and 1.0 mol/mol in a one-pot bioreactor cultivation). The process required only a minor genetic engineering, namely a single gene knock-out. Noticeably, by employing a metabolic integration of the two bacteria, it was possible to produce biomass and muconate by utilizing only CO2 and guaiacol as carbon sources. CONCLUSIONS By the novel approach, we were able to overcome the issues related to aerobic O-demethylation of methoxylated aromatic substrates and demonstrated carbon-wise conversion of lignin-related aromatics to products with yields unattainable by aerobic processes. This study highlights the power of synergistic integration of distinctive metabolic features of bacteria, thus unlocking new opportunities for harnessing microbial cocultures in upgrading challenging feedstocks.
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Affiliation(s)
- Ella Meriläinen
- Faculty of Engineering and Natural Sciences, Tampere University, Hervanta Campus, Korkeakoulunkatu 8, 33720, Tampere, Finland
| | - Elena Efimova
- Faculty of Engineering and Natural Sciences, Tampere University, Hervanta Campus, Korkeakoulunkatu 8, 33720, Tampere, Finland
| | - Ville Santala
- Faculty of Engineering and Natural Sciences, Tampere University, Hervanta Campus, Korkeakoulunkatu 8, 33720, Tampere, Finland
| | - Suvi Santala
- Faculty of Engineering and Natural Sciences, Tampere University, Hervanta Campus, Korkeakoulunkatu 8, 33720, Tampere, Finland.
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57
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Jain E, Rose M, Jayapal PK, Singh GP, Ram RJ. Harnessing Raman spectroscopy for the analysis of plant diversity. Sci Rep 2024; 14:12692. [PMID: 38830877 PMCID: PMC11148151 DOI: 10.1038/s41598-024-62932-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/29/2024] [Accepted: 05/22/2024] [Indexed: 06/05/2024] Open
Abstract
Here, we explore the application of Raman spectroscopy for the assessment of plant biodiversity. Raman spectra from 11 vascular plant species commonly found in forest ecosystems, specifically angiosperms (both monocots and eudicots) and pteridophytes (ferns), were acquired in vivo and in situ using a Raman leaf-clip. We achieved an overall accuracy of 91% for correct classification of a species within a plant group and identified lignin Raman spectral features as a useful discriminator for classification. The results demonstrate the potential of Raman spectroscopy in contributing to plant biodiversity assessment.
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Affiliation(s)
- Ekta Jain
- Disruptive and Sustainable Technologies for Agricultural Precision, Singapore-MIT Alliance for Research and Technology, 1 Create Way, 03-06/07/8 Research Wing, Singapore, 138602, Singapore
| | - Michelle Rose
- Disruptive and Sustainable Technologies for Agricultural Precision, Singapore-MIT Alliance for Research and Technology, 1 Create Way, 03-06/07/8 Research Wing, Singapore, 138602, Singapore
| | - Praveen Kumar Jayapal
- Disruptive and Sustainable Technologies for Agricultural Precision, Singapore-MIT Alliance for Research and Technology, 1 Create Way, 03-06/07/8 Research Wing, Singapore, 138602, Singapore
| | - Gajendra P Singh
- Disruptive and Sustainable Technologies for Agricultural Precision, Singapore-MIT Alliance for Research and Technology, 1 Create Way, 03-06/07/8 Research Wing, Singapore, 138602, Singapore
| | - Rajeev J Ram
- Disruptive and Sustainable Technologies for Agricultural Precision, Singapore-MIT Alliance for Research and Technology, 1 Create Way, 03-06/07/8 Research Wing, Singapore, 138602, Singapore.
- Research Laboratory of Electronics, Massachusetts Institute of Technology, 77 Massachusetts Avenue, 36-491, Cambridge, MA, 02139, USA.
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58
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Xu Y, Cao Y, Zhang W, Kong W, Li R, Liu Y, Wang Y, Wu Z, Qin X, He F, Fu C. CRISPR/Cas9-mediated mutation of FERULATE 5-HYDROXYLASE enhances adsorption capacity of lignocellulose-based porous carbon from paper mulberry. HORTICULTURE RESEARCH 2024; 11:uhae124. [PMID: 38919551 PMCID: PMC11197296 DOI: 10.1093/hr/uhae124] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 01/22/2024] [Accepted: 04/17/2024] [Indexed: 06/27/2024]
Affiliation(s)
- Yue Xu
- School of Chemistry and Chemical Engineering, University of Jinan, Jinan 250022, China
- Shandong Provincial Key Laboratory of Energy Genetics, Qingdao Institute of Bioenergy and Bioprocess Technology, Chinese Academy of Sciences, Qingdao 266101, China
- Shandong Energy Institute, Qingdao 266101, China
- Qingdao New Energy Shandong Laboratory, Qingdao 266101, China
| | - Yingping Cao
- Shandong Provincial Key Laboratory of Energy Genetics, Qingdao Institute of Bioenergy and Bioprocess Technology, Chinese Academy of Sciences, Qingdao 266101, China
- Shandong Energy Institute, Qingdao 266101, China
- Qingdao New Energy Shandong Laboratory, Qingdao 266101, China
| | - Wanju Zhang
- LiShizhen College of Traditional Chinese Medicine, Huanggang Normal University, Huanggang 438000, China
| | - Wen Kong
- LiShizhen College of Traditional Chinese Medicine, Huanggang Normal University, Huanggang 438000, China
| | - Rui Li
- Shandong Provincial Key Laboratory of Energy Genetics, Qingdao Institute of Bioenergy and Bioprocess Technology, Chinese Academy of Sciences, Qingdao 266101, China
- Shandong Energy Institute, Qingdao 266101, China
- Qingdao New Energy Shandong Laboratory, Qingdao 266101, China
| | - Yuchen Liu
- Shandong Provincial Key Laboratory of Energy Genetics, Qingdao Institute of Bioenergy and Bioprocess Technology, Chinese Academy of Sciences, Qingdao 266101, China
- Shandong Energy Institute, Qingdao 266101, China
- Qingdao New Energy Shandong Laboratory, Qingdao 266101, China
| | - Yu Wang
- Shandong Provincial Key Laboratory of Energy Genetics, Qingdao Institute of Bioenergy and Bioprocess Technology, Chinese Academy of Sciences, Qingdao 266101, China
- Shandong Energy Institute, Qingdao 266101, China
- Qingdao New Energy Shandong Laboratory, Qingdao 266101, China
| | - Zhenying Wu
- Shandong Provincial Key Laboratory of Energy Genetics, Qingdao Institute of Bioenergy and Bioprocess Technology, Chinese Academy of Sciences, Qingdao 266101, China
- Shandong Energy Institute, Qingdao 266101, China
- Qingdao New Energy Shandong Laboratory, Qingdao 266101, China
| | - Xiaochun Qin
- School of Chemistry and Chemical Engineering, University of Jinan, Jinan 250022, China
| | - Feng He
- Shandong Provincial Key Laboratory of Energy Genetics, Qingdao Institute of Bioenergy and Bioprocess Technology, Chinese Academy of Sciences, Qingdao 266101, China
- Shandong Energy Institute, Qingdao 266101, China
- Qingdao New Energy Shandong Laboratory, Qingdao 266101, China
| | - Chunxiang Fu
- Shandong Provincial Key Laboratory of Energy Genetics, Qingdao Institute of Bioenergy and Bioprocess Technology, Chinese Academy of Sciences, Qingdao 266101, China
- Shandong Energy Institute, Qingdao 266101, China
- Qingdao New Energy Shandong Laboratory, Qingdao 266101, China
- CAS Key Laboratory of Tibetan Medicine Research, Northwest Institute of Plateau Biology, Xining 810008, China
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Izydorczyk G, Skrzypczak D, Mironiuk M, Mikula K, Samoraj M, Gil F, Taf R, Moustakas K, Chojnacka K. Lignocellulosic biomass fertilizers: Production, characterization, and agri-applications. THE SCIENCE OF THE TOTAL ENVIRONMENT 2024; 923:171343. [PMID: 38438048 DOI: 10.1016/j.scitotenv.2024.171343] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/15/2023] [Revised: 01/29/2024] [Accepted: 02/27/2024] [Indexed: 03/06/2024]
Abstract
The growing focus on sustainable agriculture and optimal resource utilization has spurred investigations into lignocellulosic biomass as a potential source for producing environmentally friendly fertilizers. This paper reviews recent advancements in the production and application of innovative fertilizers derived from lignocellulose. It highlights potential in enhancing agricultural productivity and reducing environmental impacts such as carbon footprint and water pollution. The paper outlines various methods for conversion, highlighting the unique advantages of chemical, enzymatic, and microbiological processes, for converting lignocellulosic biomass into nutrient-rich fertilizers. The study compares the efficacy of lignocellulosic fertilizers to traditional fertilizers in promoting crop growth, enhancing soil health, and reducing nutrient losses. The results demonstrate the potential of lignocellulosic biomass-derived fertilizers in promoting resource efficiency and sustainable agriculture. While this research significantly contributes to the existing body of knowledge, further studies on long-term impacts and scalability are recommended for the development of innovative and sustainable agricultural practices.
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Affiliation(s)
- Grzegorz Izydorczyk
- Department of Advanced Material Technologies, Wroclaw University of Science and Technology, Wroclaw, Lower Silesia 50-370, Poland.
| | - Dawid Skrzypczak
- Department of Advanced Material Technologies, Wroclaw University of Science and Technology, Wroclaw, Lower Silesia 50-370, Poland
| | - Małgorzata Mironiuk
- Department of Advanced Material Technologies, Wroclaw University of Science and Technology, Wroclaw, Lower Silesia 50-370, Poland
| | - Katarzyna Mikula
- Department of Advanced Material Technologies, Wroclaw University of Science and Technology, Wroclaw, Lower Silesia 50-370, Poland
| | - Mateusz Samoraj
- Department of Advanced Material Technologies, Wroclaw University of Science and Technology, Wroclaw, Lower Silesia 50-370, Poland
| | - Filip Gil
- Department of Advanced Material Technologies, Wroclaw University of Science and Technology, Wroclaw, Lower Silesia 50-370, Poland
| | - Rafał Taf
- Department of Advanced Material Technologies, Wroclaw University of Science and Technology, Wroclaw, Lower Silesia 50-370, Poland
| | - Konstantinos Moustakas
- School of Chemical Engineering, National Technical University of Athens, 9 Iroon Polytechniou Str., Zographou Campus, GR-15780 Athens, Greece
| | - Katarzyna Chojnacka
- Department of Advanced Material Technologies, Wroclaw University of Science and Technology, Wroclaw, Lower Silesia 50-370, Poland
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60
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Delmer D, Dixon RA, Keegstra K, Mohnen D. The plant cell wall-dynamic, strong, and adaptable-is a natural shapeshifter. THE PLANT CELL 2024; 36:1257-1311. [PMID: 38301734 PMCID: PMC11062476 DOI: 10.1093/plcell/koad325] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/17/2023] [Accepted: 12/19/2023] [Indexed: 02/03/2024]
Abstract
Mythology is replete with good and evil shapeshifters, who, by definition, display great adaptability and assume many different forms-with several even turning themselves into trees. Cell walls certainly fit this definition as they can undergo subtle or dramatic changes in structure, assume many shapes, and perform many functions. In this review, we cover the evolution of knowledge of the structures, biosynthesis, and functions of the 5 major cell wall polymer types that range from deceptively simple to fiendishly complex. Along the way, we recognize some of the colorful historical figures who shaped cell wall research over the past 100 years. The shapeshifter analogy emerges more clearly as we examine the evolving proposals for how cell walls are constructed to allow growth while remaining strong, the complex signaling involved in maintaining cell wall integrity and defense against disease, and the ways cell walls adapt as they progress from birth, through growth to maturation, and in the end, often function long after cell death. We predict the next century of progress will include deciphering cell type-specific wall polymers; regulation at all levels of polymer production, crosslinks, and architecture; and how walls respond to developmental and environmental signals to drive plant success in diverse environments.
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Affiliation(s)
- Deborah Delmer
- Section of Plant Biology, University of California Davis, Davis, CA 95616, USA
| | - Richard A Dixon
- BioDiscovery Institute and Department of Biological Sciences, University of North Texas, Denton, TX 76203, USA
| | - Kenneth Keegstra
- MSU-DOE Plant Research Laboratory, Michigan State University, East Lansing, MI 48823, USA
| | - Debra Mohnen
- Complex Carbohydrate Research Center and Department of Biochemistry and Molecular Biology, University of Georgia, Athens, GA 30602, USA
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61
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Yang W, Duan H, Yu K, Hou S, Kang Y, Wang X, Hao J, Liu L, Zhang Y, Luo L, Zhao Y, Zhang J, Lan C, Wang N, Zhang X, Tang J, Zhao Q, Sun Z, Zhang X. Integrative Dissection of Lignin Composition in Tartary Buckwheat Seed Hulls for Enhanced Dehulling Efficiency. ADVANCED SCIENCE (WEINHEIM, BADEN-WURTTEMBERG, GERMANY) 2024; 11:e2400916. [PMID: 38520733 PMCID: PMC11132045 DOI: 10.1002/advs.202400916] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/24/2024] [Revised: 03/03/2024] [Indexed: 03/25/2024]
Abstract
The rigid hull encasing Tartary buckwheat seeds necessitates a laborious dehulling process before flour milling, resulting in considerable nutrient loss. Investigation of lignin composition is pivotal in understanding the structural properties of tartary buckwheat seeds hulls, as lignin is key determinant of rigidity in plant cell walls, thus directly impacting the dehulling process. Here, the lignin composition of seed hulls from 274 Tartary buckwheat accessions is analyzed, unveiling a unique lignin chemotype primarily consisting of G lignin, a common feature in gymnosperms. Furthermore, the hardness of the seed hull showed a strong negative correlation with the S lignin content. Genome-wide detection of selective sweeps uncovered that genes governing the biosynthesis of S lignin, specifically two caffeic acid O-methyltransferases (COMTs) and one ferulate 5-hydroxylases, are selected during domestication. This likely contributed to the increased S lignin content and decreased hardness of seed hulls from more domesticated varieties. Genome-wide association studies identified robust associations between FtCOMT1 and the accumulation of S lignin in seed hull. Transgenic Arabidopsis comt1 plants expressing FtCOMT1 successfully reinstated S lignin content, confirming its conserved function across plant species. These findings provide valuable metabolic and genetic insights for the potential redesign of Tartary buckwheat seed hulls.
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Affiliation(s)
- Wenqi Yang
- State Key Laboratory of Crop Stress Adaptation and ImprovementHenan Joint International Laboratory for Crop Multi‐Omics ResearchSchool of Life SciencesHenan UniversityKaifeng475004China
| | - Haiyang Duan
- National Key Laboratory of Wheat and Maize Crop ScienceCollege of AgronomyHenan Agricultural UniversityZhengzhou450002China
| | - Ke Yu
- State Key Laboratory of Crop Stress Adaptation and ImprovementHenan Joint International Laboratory for Crop Multi‐Omics ResearchSchool of Life SciencesHenan UniversityKaifeng475004China
| | - Siyu Hou
- College of AgricultureShanxi Agricultural UniversityTaigu030801China
- Houji Lab of Shanxi ProvinceTaiyuan030031China
| | - Yifan Kang
- State Key Laboratory of Crop Stress Adaptation and ImprovementHenan Joint International Laboratory for Crop Multi‐Omics ResearchSchool of Life SciencesHenan UniversityKaifeng475004China
| | - Xiao Wang
- State Key Laboratory of Crop Stress Adaptation and ImprovementHenan Joint International Laboratory for Crop Multi‐Omics ResearchSchool of Life SciencesHenan UniversityKaifeng475004China
| | - Jiongyu Hao
- College of AgricultureShanxi Agricultural UniversityTaigu030801China
| | - Longlong Liu
- Center for Agricultural Genetic Resources ResearchShanxi Agricultural UniversityTaiyuan030031China
| | - Yin Zhang
- College of AgricultureShanxi Agricultural UniversityTaigu030801China
| | - Laifu Luo
- Key Laboratory of Plant Carbon Capture and CAS Center for Excellence in Molecular Plant SciencesChinese Academy of SciencesShanghai200032China
| | - Yunjun Zhao
- Key Laboratory of Plant Carbon Capture and CAS Center for Excellence in Molecular Plant SciencesChinese Academy of SciencesShanghai200032China
| | - Junli Zhang
- State Key Laboratory of Crop Stress Adaptation and ImprovementHenan Joint International Laboratory for Crop Multi‐Omics ResearchSchool of Life SciencesHenan UniversityKaifeng475004China
| | - Chen Lan
- State Key Laboratory of Crop Stress Adaptation and ImprovementHenan Joint International Laboratory for Crop Multi‐Omics ResearchSchool of Life SciencesHenan UniversityKaifeng475004China
| | - Nan Wang
- Shenzhen Key Laboratory of Synthetic GenomicsGuangdong Provincial Key Laboratory of Synthetic GenomicsKey Laboratory of Quantitative Synthetic BiologyShenzhen Institute of Synthetic BiologyShenzhen Institute of Advanced TechnologyChinese Academy of SciencesShenzhen518055China
| | - Xuehai Zhang
- National Key Laboratory of Wheat and Maize Crop ScienceCollege of AgronomyHenan Agricultural UniversityZhengzhou450002China
| | - Jihua Tang
- National Key Laboratory of Wheat and Maize Crop ScienceCollege of AgronomyHenan Agricultural UniversityZhengzhou450002China
| | - Qiao Zhao
- Shenzhen Key Laboratory of Synthetic GenomicsGuangdong Provincial Key Laboratory of Synthetic GenomicsKey Laboratory of Quantitative Synthetic BiologyShenzhen Institute of Synthetic BiologyShenzhen Institute of Advanced TechnologyChinese Academy of SciencesShenzhen518055China
| | - Zhaoxia Sun
- College of AgricultureShanxi Agricultural UniversityTaigu030801China
- Houji Lab of Shanxi ProvinceTaiyuan030031China
| | - Xuebin Zhang
- State Key Laboratory of Crop Stress Adaptation and ImprovementHenan Joint International Laboratory for Crop Multi‐Omics ResearchSchool of Life SciencesHenan UniversityKaifeng475004China
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Xia M, McCormack ML, Suseela V, Kennedy PG, Tharayil N. Formations of mycorrhizal symbiosis alter the phenolic heteropolymers in roots and leaves of four temperate woody species. THE NEW PHYTOLOGIST 2024; 242:1476-1485. [PMID: 38659127 DOI: 10.1111/nph.19731] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/18/2023] [Accepted: 02/05/2024] [Indexed: 04/26/2024]
Affiliation(s)
- Mengxue Xia
- Department of Plant & Environmental Sciences, Clemson University, Clemson, SC, 29634, USA
| | - M Luke McCormack
- Center for Tree Science, The Morton Arboretum, Lisle, IL, 60523, USA
| | - Vidya Suseela
- Department of Plant & Environmental Sciences, Clemson University, Clemson, SC, 29634, USA
| | - Peter G Kennedy
- Department of Plant and Microbial Biology, University of Minnesota, St Paul, MN, 55108, USA
| | - Nishanth Tharayil
- Department of Plant & Environmental Sciences, Clemson University, Clemson, SC, 29634, USA
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Wang P, Feng X, Lv Z, Liu J, Teng Q, Chen T, Liu Q. Temporal dynamics of lignin degradation in Quercus acutissima sawdust during Ganoderma lucidum cultivation. Int J Biol Macromol 2024; 268:131686. [PMID: 38643923 DOI: 10.1016/j.ijbiomac.2024.131686] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/08/2023] [Revised: 04/07/2024] [Accepted: 04/17/2024] [Indexed: 04/23/2024]
Abstract
Despite a fair amount of lignin conversion during mycelial growth, previous structural analyses have not yet revealed how lignin changes continuously and what the relationship is between lignin and ligninolytic enzymes. To clarify these aspects, Quercus acutissima sawdust attaching Ganoderma lucidum mycelium collected from different growth stage was subjected to analysis of lignin structure and ligninolytic enzyme activity. Two key periods of lignin degradation are found during the cultivation of G. lucidum: hypha rapid growth period and primordium formation period. In the first stage, laccase activity is associated with the opening of structures such as methoxyls, β-O-4' substructures and guaiacyl units in lignin, as well as the shortening of lignin chains. Manganese peroxidases and lignin peroxidases are more suitable for degrading short chain lignin. The structure of phenylcoumarans and syringyl changes greatly in the second stage. The results from sawdust attaching mycelium provide new insights to help improve the cultivation substrate formulation of G. lucidum and understand biomass valorization better.
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Affiliation(s)
- Peng Wang
- Department of Vegetables, College of Horticulture, China Agricultural University, Beijing 100193, China
| | - Xiaobin Feng
- Cangzhou Academy of Agriculture and Forestry Sciences, Hebei 061000, China
| | - Ziwen Lv
- Beijing Key Laboratory of Lignocellulosic Chemistry, Beijing Forestry University, Beijing 100083, China
| | - Jia Liu
- Department of Vegetables, College of Horticulture, China Agricultural University, Beijing 100193, China
| | - Qian Teng
- Department of Vegetables, College of Horticulture, China Agricultural University, Beijing 100193, China
| | - Tong Chen
- Department of Vegetables, College of Horticulture, China Agricultural University, Beijing 100193, China
| | - Qinghong Liu
- Department of Vegetables, College of Horticulture, China Agricultural University, Beijing 100193, China.
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Rao X, Barros J. Modeling lignin biosynthesis: a pathway to renewable chemicals. TRENDS IN PLANT SCIENCE 2024; 29:546-559. [PMID: 37802691 DOI: 10.1016/j.tplants.2023.09.011] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/31/2023] [Revised: 09/01/2023] [Accepted: 09/18/2023] [Indexed: 10/08/2023]
Abstract
Plant biomass contains lignin that can be converted into high-value-added chemicals, fuels, and materials. The precise genetic manipulation of lignin content and composition in plant cells offers substantial environmental and economic benefits. However, the intricate regulatory mechanisms governing lignin formation challenge the development of crops with specific lignin profiles. Mathematical models and computational simulations have recently been employed to gain fundamental understanding of the metabolism of lignin and related phenolic compounds. This review article discusses the strategies used for modeling plant metabolic networks, focusing on the application of mathematical modeling for flux network analysis in monolignol biosynthesis. Furthermore, we highlight how current challenges might be overcome to optimize the use of metabolic modeling approaches for developing lignin-engineered plants.
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Affiliation(s)
- Xiaolan Rao
- State Key Laboratory of Biocatalysis and Enzyme Engineering, School of Life Sciences, Hubei University, Wuhan 430062, China.
| | - Jaime Barros
- Division of Plant Sciences and Interdisciplinary Plant Group, University of Missouri, Columbia, MO 65211, USA.
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Dixon RA, Dickinson AJ. A century of studying plant secondary metabolism-From "what?" to "where, how, and why?". PLANT PHYSIOLOGY 2024; 195:48-66. [PMID: 38163637 PMCID: PMC11060662 DOI: 10.1093/plphys/kiad596] [Citation(s) in RCA: 9] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/10/2023] [Accepted: 08/15/2023] [Indexed: 01/03/2024]
Abstract
Over the past century, early advances in understanding the identity of the chemicals that collectively form a living plant have led scientists to deeper investigations exploring where these molecules localize, how they are made, and why they are synthesized in the first place. Many small molecules are specific to the plant kingdom and have been termed plant secondary metabolites, despite the fact that they can play primary and essential roles in plant structure, development, and response to the environment. The past 100 yr have witnessed elucidation of the structure, function, localization, and biosynthesis of selected plant secondary metabolites. Nevertheless, many mysteries remain about the vast diversity of chemicals produced by plants and their roles in plant biology. From early work characterizing unpurified plant extracts, to modern integration of 'omics technology to discover genes in metabolite biosynthesis and perception, research in plant (bio)chemistry has produced knowledge with substantial benefits for society, including human medicine and agricultural biotechnology. Here, we review the history of this work and offer suggestions for future areas of exploration. We also highlight some of the recently developed technologies that are leading to ongoing research advances.
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Affiliation(s)
- Richard A Dixon
- BioDiscovery Institute and Department of Biological Sciences, University of North Texas, Denton, TX 76203, USA
| | - Alexandra Jazz Dickinson
- Department of Cell and Developmental Biology, University of California at San Diego, La Jolla, CA 92093, USA
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66
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Liu Y, Li T, Zhu H, Cao L, Liang L, Liu D, Shen Q. Methionine inducing carbohydrate esterase secretion of Trichoderma harzianum enhances the accessibility of substrate glycosidic bonds. Microb Cell Fact 2024; 23:120. [PMID: 38664812 PMCID: PMC11046756 DOI: 10.1186/s12934-024-02394-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/20/2024] [Accepted: 04/16/2024] [Indexed: 04/28/2024] Open
Abstract
BACKGROUND The conversion of plant biomass into biochemicals is a promising way to alleviate energy shortage, which depends on efficient microbial saccharification and cellular metabolism. Trichoderma spp. have plentiful CAZymes systems that can utilize all-components of lignocellulose. Acetylation of polysaccharides causes nanostructure densification and hydrophobicity enhancement, which is an obstacle for glycoside hydrolases to hydrolyze glycosidic bonds. The improvement of deacetylation ability can effectively release the potential for polysaccharide degradation. RESULTS Ammonium sulfate addition facilitated the deacetylation of xylan by inducing the up-regulation of multiple carbohydrate esterases (CE3/CE4/CE15/CE16) of Trichoderma harzianum. Mainly, the pathway of ammonium-sulfate's cellular assimilates inducing up-regulation of the deacetylase gene (Thce3) was revealed. The intracellular metabolite changes were revealed through metabonomic analysis. Whole genome bisulfite sequencing identified a novel differentially methylated region (DMR) that existed in the ThgsfR2 promoter, and the DMR was closely related to lignocellulolytic response. ThGsfR2 was identified as a negative regulatory factor of Thce3, and methylation in ThgsfR2 promoter released the expression of Thce3. The up-regulation of CEs facilitated the substrate deacetylation. CONCLUSION Ammonium sulfate increased the polysaccharide deacetylation capacity by inducing the up-regulation of multiple carbohydrate esterases of T. harzianum, which removed the spatial barrier of the glycosidic bond and improved hydrophilicity, and ultimately increased the accessibility of glycosidic bond to glycoside hydrolases.
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Affiliation(s)
- Yang Liu
- Key Lab of Organic-Based Fertilizers of China and Jiangsu Provincial Key Lab for Solid Organic Waste Utilization, Nanjing Agricultural University, Nanjing, 210095, People's Republic of China
- College of Resource and Environmental Sciences, Nanjing Agricultural University, Nanjing, 210095, People's Republic of China
| | - Tuo Li
- Key Lab of Organic-Based Fertilizers of China and Jiangsu Provincial Key Lab for Solid Organic Waste Utilization, Nanjing Agricultural University, Nanjing, 210095, People's Republic of China
- College of Resource and Environmental Sciences, Nanjing Agricultural University, Nanjing, 210095, People's Republic of China
| | - Han Zhu
- Key Lab of Organic-Based Fertilizers of China and Jiangsu Provincial Key Lab for Solid Organic Waste Utilization, Nanjing Agricultural University, Nanjing, 210095, People's Republic of China
- College of Resource and Environmental Sciences, Nanjing Agricultural University, Nanjing, 210095, People's Republic of China
| | - Linhua Cao
- Key Lab of Organic-Based Fertilizers of China and Jiangsu Provincial Key Lab for Solid Organic Waste Utilization, Nanjing Agricultural University, Nanjing, 210095, People's Republic of China
- College of Resource and Environmental Sciences, Nanjing Agricultural University, Nanjing, 210095, People's Republic of China
| | - Lebin Liang
- Key Lab of Organic-Based Fertilizers of China and Jiangsu Provincial Key Lab for Solid Organic Waste Utilization, Nanjing Agricultural University, Nanjing, 210095, People's Republic of China
- College of Resource and Environmental Sciences, Nanjing Agricultural University, Nanjing, 210095, People's Republic of China
| | - Dongyang Liu
- Key Lab of Organic-Based Fertilizers of China and Jiangsu Provincial Key Lab for Solid Organic Waste Utilization, Nanjing Agricultural University, Nanjing, 210095, People's Republic of China.
- College of Resource and Environmental Sciences, Nanjing Agricultural University, Nanjing, 210095, People's Republic of China.
| | - Qirong Shen
- Key Lab of Organic-Based Fertilizers of China and Jiangsu Provincial Key Lab for Solid Organic Waste Utilization, Nanjing Agricultural University, Nanjing, 210095, People's Republic of China
- College of Resource and Environmental Sciences, Nanjing Agricultural University, Nanjing, 210095, People's Republic of China
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Jiang L, Zhu Y, Wei J, Ren H, Zhai H. Solubilization and structural changes of lignin in naked oat stems during subcritical water autohydrolysis. Int J Biol Macromol 2024; 265:130911. [PMID: 38492693 DOI: 10.1016/j.ijbiomac.2024.130911] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/12/2023] [Revised: 03/13/2024] [Accepted: 03/13/2024] [Indexed: 03/18/2024]
Abstract
In this study, the solubilization and structural changes of lignin in naked oat stems were investigated under subcritical water autohydrolysis systems (170-210 °C, 0.68-1.85 MPa). In this system, Hemicellulose was preferentially hydrolyzed in the liquid water at elevated temperatures, leading to the production of acetic acid and glucuronic acid, which acidified the reaction system. Under acidic and high-temperature conditions, lignin primarily underwent degradation and condensation reactions. At autohydrolysis temperatures below 190 °C and autohydrolysis pressures below 1.22 MPa, lignin degradation was predominant, realizing a maximum lignin removal of 47.8 % and breakage of numerous β-O-4 bonds from lignin. At autohydrolysis temperatures above 190 °C and autohydrolysis pressures above 1.22 MPa, lignin condensation dominated, with an increase in the amount of organic acids generated upon hemicellulose degradation, leading to condensation reactions with the degraded low-molecular-weight lignin. The degree of lignin condensation was positively correlated with the temperature of the reaction system. This study provides essential insights into the dynamic changes in the structure of lignin in both the hydrolysis residue and hydrolysis solution during subcritical water autohydrolysis.
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Affiliation(s)
- Long Jiang
- Jiangsu Co-Innovation Center for Efficient Processing and Utilization of Forest Resources, Jiangsu Provincial Key Lab of Pulp and Paper Science and Technology, Nanjing Forestry University, Nanjing 210037, China
| | - Yanchen Zhu
- Jiangsu Co-Innovation Center for Efficient Processing and Utilization of Forest Resources, Jiangsu Provincial Key Lab of Pulp and Paper Science and Technology, Nanjing Forestry University, Nanjing 210037, China
| | - Jiahui Wei
- Jiangsu Co-Innovation Center for Efficient Processing and Utilization of Forest Resources, Jiangsu Provincial Key Lab of Pulp and Paper Science and Technology, Nanjing Forestry University, Nanjing 210037, China
| | - Hao Ren
- Jiangsu Co-Innovation Center for Efficient Processing and Utilization of Forest Resources, Jiangsu Provincial Key Lab of Pulp and Paper Science and Technology, Nanjing Forestry University, Nanjing 210037, China.
| | - Huamin Zhai
- Jiangsu Co-Innovation Center for Efficient Processing and Utilization of Forest Resources, Jiangsu Provincial Key Lab of Pulp and Paper Science and Technology, Nanjing Forestry University, Nanjing 210037, China
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Xu L, Nawaz MZ, Khalid HR, Waqar-Ul-Haq, Alghamdi HA, Sun J, Zhu D. Modulating the pH profile of vanillin dehydrogenase enzyme from extremophile Bacillus ligniniphilus L1 through computational guided site-directed mutagenesis. Int J Biol Macromol 2024; 263:130359. [PMID: 38387643 DOI: 10.1016/j.ijbiomac.2024.130359] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/22/2023] [Revised: 02/18/2024] [Accepted: 02/19/2024] [Indexed: 02/24/2024]
Abstract
Vanillin dehydrogenase (VDH) has recently come forward as an important enzyme for the commercial production of vanillic acid from vanillin in a one-step enzymatic process. However, VDH with high alkaline tolerance and efficiency is desirable to meet the biorefinery requirements. In this study, computationally guided site-directed mutagenesis was performed by increasing the positive and negative charges on the surface and near the active site of the VDH from the alkaliphilic marine bacterium Bacillus ligniniphilus L1, respectively. In total, 20 residues including 15 from surface amino acids and 5 near active sites were selected based on computational analysis and were subjected to site-directed mutations. The optimum pH of the two screened mutants including I132R, and T235E from surface residue and near active site mutant was shifted to 9, and 8.6, with a 2.82- and 2.95-fold increase in their activity compared to wild enzyme at pH 9, respectively. A double mutant containing both these mutations i.e., I132R/T235E was produced which showed a shift in optimum pH of VDH from 7.4 to 9, with an increase of 74.91 % in enzyme activity. Therefore, the double mutant of VDH from the L1 strain (I132R/T235E) produced in this study represents a potential candidate for industrial applications.
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Affiliation(s)
- Lingxia Xu
- Biofuels Institute, School of Emergency Management, School of the Environment and Safety Engineering, Jiangsu University, Zhenjiang, Jiangsu 212013, China; International Joint Laboratory on Synthetic Biology and Biomass Biorefinery, Jiangsu University, Zhenjiang, Jiangsu 212013, China; Jiangsu Collaborative Innovation Center of Technology and Material of Water Treatment, Suzhou University of Science and Technology, Suzhou 215009, PR China
| | - Muhammad Zohaib Nawaz
- Biofuels Institute, School of Emergency Management, School of the Environment and Safety Engineering, Jiangsu University, Zhenjiang, Jiangsu 212013, China; International Joint Laboratory on Synthetic Biology and Biomass Biorefinery, Jiangsu University, Zhenjiang, Jiangsu 212013, China; Jiangsu Collaborative Innovation Center of Technology and Material of Water Treatment, Suzhou University of Science and Technology, Suzhou 215009, PR China
| | - Hafiz Rameez Khalid
- Biofuels Institute, School of Emergency Management, School of the Environment and Safety Engineering, Jiangsu University, Zhenjiang, Jiangsu 212013, China; International Joint Laboratory on Synthetic Biology and Biomass Biorefinery, Jiangsu University, Zhenjiang, Jiangsu 212013, China; Jiangsu Collaborative Innovation Center of Technology and Material of Water Treatment, Suzhou University of Science and Technology, Suzhou 215009, PR China
| | - Waqar-Ul-Haq
- Biofuels Institute, School of Emergency Management, School of the Environment and Safety Engineering, Jiangsu University, Zhenjiang, Jiangsu 212013, China; International Joint Laboratory on Synthetic Biology and Biomass Biorefinery, Jiangsu University, Zhenjiang, Jiangsu 212013, China; Jiangsu Collaborative Innovation Center of Technology and Material of Water Treatment, Suzhou University of Science and Technology, Suzhou 215009, PR China
| | - Huda Ahmed Alghamdi
- Department of Biology, College of Sciences, King Khalid University, Abha 61413, Saudi Arabia
| | - Jianzhong Sun
- Biofuels Institute, School of Emergency Management, School of the Environment and Safety Engineering, Jiangsu University, Zhenjiang, Jiangsu 212013, China
| | - Daochen Zhu
- Biofuels Institute, School of Emergency Management, School of the Environment and Safety Engineering, Jiangsu University, Zhenjiang, Jiangsu 212013, China; International Joint Laboratory on Synthetic Biology and Biomass Biorefinery, Jiangsu University, Zhenjiang, Jiangsu 212013, China; Jiangsu Collaborative Innovation Center of Technology and Material of Water Treatment, Suzhou University of Science and Technology, Suzhou 215009, PR China.
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Ewuzie RN, Genza JR, Abdullah AZ. Review of the application of bimetallic catalysts coupled with internal hydrogen donor for catalytic hydrogenolysis of lignin to produce phenolic fine chemicals. Int J Biol Macromol 2024; 265:131084. [PMID: 38521312 DOI: 10.1016/j.ijbiomac.2024.131084] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/18/2023] [Revised: 03/12/2024] [Accepted: 03/20/2024] [Indexed: 03/25/2024]
Abstract
Lignocellulosic biomass contains lignin, an aromatic and oxygenated substance and a potential method for lignin utilization is achieved through catalytic conversion into useful phenolic and aromatic monomers. The application of monometallic catalysts for lignin hydrogenolysis reaction remains one of the major reasons for the underutilization of lignin to produce valuable chemicals. Monometallic catalysts have many limitations such as limited catalytic sites for interacting with different lignin linkages, poor catalytic activity, low lignin conversion, and low product selectivity. It is due to lack of synergy with other metallic catalysts that can enhance the catalytic activity, stability, selectivity, and overall catalytic performance. To overcome these limitations, works on the application of bimetallic catalysts that can offer higher activity, selectivity, and stability have been initiated. In this review, cutting-edge insights into the catalytic hydrogenolysis of lignin, focusing on the production of phenolic and aromatic monomers using bimetallic catalysts within an internal hydrogen donor solvent are discussed. The contribution of this work lies in a critical discussion of recent reported findings, in-depth analyses of reaction mechanisms, optimal conditions, and emerging trends in lignin catalytic hydrogenolysis. The specific effects of catalytic active components on the reaction outcomes are also explored. Additionally, this review extends beyond current knowledge, offering forward-looking suggestions for utilizing lignin as a raw material in the production of valuable products across various industrial processes. This work not only consolidates existing knowledge but also introduces novel perspectives, paving the way for future advancements in lignin utilization and catalytic processes.
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Affiliation(s)
| | - Jackson Robinson Genza
- School of Chemical Engineering, Universiti Sains Malaysia, 14300 Nibong Tebal, Penang, Malaysia
| | - Ahmad Zuhairi Abdullah
- School of Chemical Engineering, Universiti Sains Malaysia, 14300 Nibong Tebal, Penang, Malaysia.
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70
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Kanbargi N, Damron JT, Gao Y, Kearney LT, Carrillo JM, Keum JK, Sumpter BG, Naskar AK. Amplifying Nanoparticle Reinforcement through Low Volume Topologically Controlled Chemical Coupling. ACS Macro Lett 2024; 13:280-287. [PMID: 38346266 DOI: 10.1021/acsmacrolett.3c00739] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/20/2024]
Abstract
We present a streamlined method to covalently bond hydroxylated carbon nanotubes (CNOH) within a polyphenol matrix, all achieved through a direct, solvent-free process. Employing an extremely small concentration of CNOH (0.01% w/w) along with topologically contrasting linkers led to a maximum of 5-fold increase in modulus and a 25% enhancement in tensile strength compared to the unaltered matrix, an order of magnitude greater reinforcement (w/w) compared to state-of-the-art melt-processed nanocomposites. Through dynamic mechanical analysis, low field solid-state nuclear magnetic resonance spectroscopy, and molecular dynamics simulations, we uncovered the profound influence of linker's conformational degrees of freedom on the segmental dynamics and therefore the material's properties.
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Affiliation(s)
- Nihal Kanbargi
- Chemical Sciences Division, Oak Ridge National Laboratory, 1 Bethel Valley Road, Oak Ridge, Tennessee 37831, United States
| | - Joshua T Damron
- Chemical Sciences Division, Oak Ridge National Laboratory, 1 Bethel Valley Road, Oak Ridge, Tennessee 37831, United States
| | - Yawei Gao
- Chemical Sciences Division, Oak Ridge National Laboratory, 1 Bethel Valley Road, Oak Ridge, Tennessee 37831, United States
| | - Logan T Kearney
- Chemical Sciences Division, Oak Ridge National Laboratory, 1 Bethel Valley Road, Oak Ridge, Tennessee 37831, United States
| | - Jan Michael Carrillo
- Center for Nanophase Materials Sciences, Oak Ridge National Laboratory, 1 Bethel Valley Road, Oak Ridge, Tennessee 37831, United States
| | - Jong K Keum
- Center for Nanophase Materials Sciences, Oak Ridge National Laboratory, 1 Bethel Valley Road, Oak Ridge, Tennessee 37831, United States
| | - Bobby G Sumpter
- Center for Nanophase Materials Sciences, Oak Ridge National Laboratory, 1 Bethel Valley Road, Oak Ridge, Tennessee 37831, United States
| | - Amit K Naskar
- Chemical Sciences Division, Oak Ridge National Laboratory, 1 Bethel Valley Road, Oak Ridge, Tennessee 37831, United States
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71
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Thakur MSH, Shi C, Kearney LT, Saadi MASR, Meyer MD, Naskar AK, Ajayan PM, Rahman MM. Three-dimensional printing of wood. SCIENCE ADVANCES 2024; 10:eadk3250. [PMID: 38489368 PMCID: PMC10942110 DOI: 10.1126/sciadv.adk3250] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/15/2023] [Accepted: 02/09/2024] [Indexed: 03/17/2024]
Abstract
Natural wood has served as a foundational material for buildings, furniture, and architectural structures for millennia, typically shaped through subtractive manufacturing techniques. However, this process often generates substantial wood waste, leading to material inefficiency and increased production costs. A potential opportunity arises if complex wood structures can be created through additive processes. Here, we demonstrate an additive-free, water-based ink made of lignin and cellulose, the primary building blocks of natural wood, that can be used to three-dimensional (3D) print architecturally designed wood structures via direct ink writing. The resulting printed structures, after heat treatment, closely resemble the visual, textural, olfactory, and macro-anisotropic properties, including mechanical properties, of natural wood. Our results pave the way for 3D-printed wooden construction with a sustainable pathway to upcycle/recycle natural wood.
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Affiliation(s)
| | - Chen Shi
- Department of Materials Science and NanoEngineering, Rice University, Houston, TX, USA
| | - Logan T. Kearney
- Chemical Sciences Division, Oak Ridge National Laboratory, Oak Ridge, TN, USA
| | - M. A. S. R. Saadi
- Department of Materials Science and NanoEngineering, Rice University, Houston, TX, USA
| | | | - Amit K. Naskar
- Chemical Sciences Division, Oak Ridge National Laboratory, Oak Ridge, TN, USA
| | - Pulickel M. Ajayan
- Department of Materials Science and NanoEngineering, Rice University, Houston, TX, USA
| | - Muhammad M. Rahman
- Department of Materials Science and NanoEngineering, Rice University, Houston, TX, USA
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Lam LPY, Lui ACW, Bartley LE, Mikami B, Umezawa T, Lo C. Multifunctional 5-hydroxyconiferaldehyde O-methyltransferases (CAldOMTs) in plant metabolism. JOURNAL OF EXPERIMENTAL BOTANY 2024; 75:1671-1695. [PMID: 38198655 DOI: 10.1093/jxb/erae011] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/02/2023] [Accepted: 01/09/2024] [Indexed: 01/12/2024]
Abstract
Lignin, flavonoids, melatonin, and stilbenes are plant specialized metabolites with diverse physiological and biological functions, supporting plant growth and conferring stress resistance. Their biosynthesis requires O-methylations catalyzed by 5-hydroxyconiferaldehyde O-methyltransferase (CAldOMT; also called caffeic acid O-methyltransferase, COMT). CAldOMT was first known for its roles in syringyl (S) lignin biosynthesis in angiosperm cell walls and later found to be multifunctional. This enzyme also catalyzes O-methylations in flavonoid, melatonin, and stilbene biosynthetic pathways. Phylogenetic analysis indicated the convergent evolution of enzymes with OMT activities towards the monolignol biosynthetic pathway intermediates in some gymnosperm species that lack S-lignin and Selaginella moellendorffii, a lycophyte which produces S-lignin. Furthermore, neofunctionalization of CAldOMTs occurred repeatedly during evolution, generating unique O-methyltransferases (OMTs) with novel catalytic activities and/or accepting novel substrates, including lignans, 1,2,3-trihydroxybenzene, and phenylpropenes. This review summarizes multiple aspects of CAldOMTs and their related proteins in plant metabolism and discusses their evolution, molecular mechanism, and roles in biorefineries, agriculture, and synthetic biology.
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Affiliation(s)
- Lydia Pui Ying Lam
- Graduate School of Engineering Science, Akita University, Tegata Gakuen-machi 1-1, Akita City, Akita 010-0852, Japan
| | - Andy C W Lui
- Plant Breeding and Genetics Section, School of Integrative Plant Science, Cornell University, Ithaca, NY 14853, USA
| | - Laura E Bartley
- Institute of Biological Chemistry, Washington State University, Pullman, WA 99164, USA
| | - Bunzo Mikami
- Research Institute for Sustainable Humanosphere, Kyoto University, Gokasho, Uji, Kyoto 611-0011, Japan
| | - Toshiaki Umezawa
- Research Institute for Sustainable Humanosphere, Kyoto University, Gokasho, Uji, Kyoto 611-0011, Japan
| | - Clive Lo
- School of Biological Sciences, The University of Hong Kong, Pokfulam, Hong Kong, China
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Wu X, Smet E, Brandi F, Raikwar D, Zhang Z, Maes BUW, Sels BF. Advancements and Perspectives toward Lignin Valorization via O-Demethylation. Angew Chem Int Ed Engl 2024; 63:e202317257. [PMID: 38128012 DOI: 10.1002/anie.202317257] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/13/2023] [Revised: 12/20/2023] [Accepted: 12/21/2023] [Indexed: 12/23/2023]
Abstract
Lignin represents the largest aromatic carbon resource in plants, holding significant promise as a renewable feedstock for bioaromatics and other cyclic hydrocarbons in the context of the circular bioeconomy. However, the methoxy groups of aryl methyl ethers, abundantly found in technical lignins and lignin-derived chemicals, limit their pertinent chemical reactivity and broader applicability. Unlocking the phenolic hydroxyl functionality through O-demethylation (ODM) has emerged as a valuable approach to mitigate this need and enables further applications. In this review, we provide a comprehensive summary of the progress in the valorization of technical lignin and lignin-derived chemicals via ODM, both catalytic and non-catalytic reactions. Furthermore, a detailed analysis of the properties and potential applications of the O-demethylated products is presented, accompanied by a systematic overview of available ODM reactions. This review primarily focuses on enhancing the phenolic hydroxyl content in lignin-derived species through ODM, showcasing its potential in the catalytic funneling of lignin and value-added applications. A comprehensive synopsis and future outlook are included in the concluding section of this review.
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Affiliation(s)
- Xian Wu
- Center for Sustainable Catalysis and Engineering, KU Leuven, Celestijnenlaan 200F, 3001, Leuven, Belgium
| | - Ewoud Smet
- Organic Synthesis Division, Department of Chemistry, University of Antwerp, Groenenborgerlaan 171, 2020, Antwerp, Belgium
| | - Francesco Brandi
- Center for Sustainable Catalysis and Engineering, KU Leuven, Celestijnenlaan 200F, 3001, Leuven, Belgium
| | - Deepak Raikwar
- Center for Sustainable Catalysis and Engineering, KU Leuven, Celestijnenlaan 200F, 3001, Leuven, Belgium
| | - Zhenlei Zhang
- Center for Sustainable Catalysis and Engineering, KU Leuven, Celestijnenlaan 200F, 3001, Leuven, Belgium
| | - Bert U W Maes
- Organic Synthesis Division, Department of Chemistry, University of Antwerp, Groenenborgerlaan 171, 2020, Antwerp, Belgium
| | - Bert F Sels
- Center for Sustainable Catalysis and Engineering, KU Leuven, Celestijnenlaan 200F, 3001, Leuven, Belgium
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74
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Oliveira DM, Cao D. Spotlight on overlooked lignin monomers: Hydroxycinnamaldehydes. PLANT PHYSIOLOGY 2024; 194:1250-1252. [PMID: 37933704 PMCID: PMC10904313 DOI: 10.1093/plphys/kiad589] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/18/2023] [Revised: 10/25/2023] [Accepted: 10/25/2023] [Indexed: 11/08/2023]
Affiliation(s)
- Dyoni M Oliveira
- Assistant Features Editor, Plant Physiology, American Society of Plant Biologists
- Department of Plant Biotechnology and Bioinformatics, Ghent University, 9052 Ghent, Belgium
- VIB Center for Plant Systems Biology, 9052 Ghent, Belgium
| | - Dechang Cao
- Assistant Features Editor, Plant Physiology, American Society of Plant Biologists
- Germplasm Bank of Wild Species, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, Yunnan 650201, China
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75
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Yoshioka K, Kim H, Lu F, De Ridder N, Vanholme R, Kajita S, Boerjan W, Ralph J. Hydroxycinnamaldehyde-derived benzofuran components in lignins. PLANT PHYSIOLOGY 2024; 194:1370-1382. [PMID: 37773018 DOI: 10.1093/plphys/kiad514] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/26/2023] [Revised: 09/11/2023] [Accepted: 09/11/2023] [Indexed: 09/30/2023]
Abstract
Lignin is an abundant polymer in plant secondary cell walls. Prototypical lignins derive from the polymerization of monolignols (hydroxycinnamyl alcohols), mainly coniferyl and sinapyl alcohol, via combinatorial radical coupling reactions and primarily via the endwise coupling of a monomer with the phenolic end of the growing polymer. Hydroxycinnamaldehyde units have long been recognized as minor components of lignins. In plants deficient in cinnamyl alcohol dehydrogenase, the last enzyme in the monolignol biosynthesis pathway that reduces hydroxycinnamaldehydes to monolignols, chain-incorporated aldehyde unit levels are elevated. The nature and relative levels of aldehyde components in lignins can be determined from their distinct and dispersed correlations in 2D 1H-13C-correlated nuclear magnetic resonance (NMR) spectra. We recently became aware of aldehyde NMR peaks, well resolved from others, that had been overlooked. NMR of isolated low-molecular-weight oligomers from biomimetic radical coupling reactions involving coniferaldehyde revealed that the correlation peaks belonged to hydroxycinnamaldehyde-derived benzofuran moieties. Coniferaldehyde 8-5-coupling initially produces the expected phenylcoumaran structures, but the derived phenolic radicals undergo preferential disproportionation rather than radical coupling to extend the growing polymer. As a result, the hydroxycinnamaldehyde-derived phenylcoumaran units are difficult to detect in lignins, but the benzofurans are now readily observed by their distinct and dispersed correlations in the aldehyde region of NMR spectra from any lignin or monolignol dehydrogenation polymer. Hydroxycinnamaldehydes that are coupled to coniferaldehyde can be distinguished from those coupled with a generic guaiacyl end-unit. These benzofuran peaks may now be annotated and reported and their structural ramifications further studied.
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Affiliation(s)
- Koichi Yoshioka
- The US Department of Energy's Great Lakes Bioenergy Research Center, University of Wisconsin, Madison, WI 53726, USA
- The Wisconsin Energy Institute, University of Wisconsin, Madison, WI 53726, USA
| | - Hoon Kim
- The US Department of Energy's Great Lakes Bioenergy Research Center, University of Wisconsin, Madison, WI 53726, USA
- The Wisconsin Energy Institute, University of Wisconsin, Madison, WI 53726, USA
| | - Fachuang Lu
- The US Department of Energy's Great Lakes Bioenergy Research Center, University of Wisconsin, Madison, WI 53726, USA
- The Wisconsin Energy Institute, University of Wisconsin, Madison, WI 53726, USA
| | - Nette De Ridder
- Department of Plant Biotechnology and Bioinformatics, Ghent University, Technologiepark 71, Ghent 9052, Belgium
- VIB Center for Plant Systems Biology, VIB, Technologiepark 71, Ghent 9052, Belgium
| | - Ruben Vanholme
- Department of Plant Biotechnology and Bioinformatics, Ghent University, Technologiepark 71, Ghent 9052, Belgium
- VIB Center for Plant Systems Biology, VIB, Technologiepark 71, Ghent 9052, Belgium
| | - Shinya Kajita
- Graduate School of Bio-Applications and Systems Engineering, Tokyo University of Agriculture and Technology, Tokyo 184-8588, Japan
- Institute of Global Innovation Research, Tokyo University of Agriculture and Technology, Tokyo 184-8588, Japan
| | - Wout Boerjan
- Department of Plant Biotechnology and Bioinformatics, Ghent University, Technologiepark 71, Ghent 9052, Belgium
- VIB Center for Plant Systems Biology, VIB, Technologiepark 71, Ghent 9052, Belgium
| | - John Ralph
- The US Department of Energy's Great Lakes Bioenergy Research Center, University of Wisconsin, Madison, WI 53726, USA
- The Wisconsin Energy Institute, University of Wisconsin, Madison, WI 53726, USA
- Department of Biochemistry, University of Wisconsin, Madison, WI 53706, USA
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76
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Peracchi LM, Panahabadi R, Barros-Rios J, Bartley LE, Sanguinet KA. Grass lignin: biosynthesis, biological roles, and industrial applications. FRONTIERS IN PLANT SCIENCE 2024; 15:1343097. [PMID: 38463570 PMCID: PMC10921064 DOI: 10.3389/fpls.2024.1343097] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/22/2023] [Accepted: 02/06/2024] [Indexed: 03/12/2024]
Abstract
Lignin is a phenolic heteropolymer found in most terrestrial plants that contributes an essential role in plant growth, abiotic stress tolerance, and biotic stress resistance. Recent research in grass lignin biosynthesis has found differences compared to dicots such as Arabidopsis thaliana. For example, the prolific incorporation of hydroxycinnamic acids into grass secondary cell walls improve the structural integrity of vascular and structural elements via covalent crosslinking. Conversely, fundamental monolignol chemistry conserves the mechanisms of monolignol translocation and polymerization across the plant phylum. Emerging evidence suggests grass lignin compositions contribute to abiotic stress tolerance, and periods of biotic stress often alter cereal lignin compositions to hinder pathogenesis. This same recalcitrance also inhibits industrial valorization of plant biomass, making lignin alterations and reductions a prolific field of research. This review presents an update of grass lignin biosynthesis, translocation, and polymerization, highlights how lignified grass cell walls contribute to plant development and stress responses, and briefly addresses genetic engineering strategies that may benefit industrial applications.
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Affiliation(s)
- Luigi M. Peracchi
- Department of Crop and Soil Sciences, Washington State University, Pullman, WA, United States
| | - Rahele Panahabadi
- Institute of Biological Chemistry, Washington State University, Pullman, WA, United States
| | - Jaime Barros-Rios
- Division of Plant Sciences and Interdisciplinary Plant Group, University of Missouri, Columbia, MO, United States
| | - Laura E. Bartley
- Institute of Biological Chemistry, Washington State University, Pullman, WA, United States
| | - Karen A. Sanguinet
- Department of Crop and Soil Sciences, Washington State University, Pullman, WA, United States
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77
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Sethuraman V, Vermaas JV, Liang L, Ragauskas AJ, Smith JC, Petridis L. Atomistic Simulations of Polydisperse Lignin Melts Using Simple Polydisperse Residue Input Generator. Biomacromolecules 2024; 25:767-777. [PMID: 38157547 DOI: 10.1021/acs.biomac.3c00951] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2024]
Abstract
Understanding the physics of lignin will help rationalize its function in plant cell walls as well as aiding practical applications such as deriving biofuels and bioproducts. Here, we present SPRIG (Simple Polydisperse Residue Input Generator), a program for generating atomic-detail models of random polydisperse lignin copolymer melts i.e., the state most commonly found in nature. Using these models, we use all-atom molecular dynamics (MD) simulations to investigate the conformational and dynamic properties of polydisperse melts representative of switchgrass (Panicum virgatum L.) lignin. Polydispersity, branching and monolignol sequence are found to not affect the calculated glass transition temperature, Tg. The Flory-Huggins scaling parameter for the segmental radius of gyration is 0.42 ± 0.02, indicating that the chains exhibit statistics that lie between a globular chain and an ideal Gaussian chain. Below Tg the atomic mean squared displacements are independent of molecular weight. In contrast, above Tg, they decrease with increasing molecular weight. Therefore, a monodisperse lignin melt is a good approximation to this polydisperse lignin when only static properties are probed, whereas the molecular weight distribution needs to be considered while analyzing lignin dynamics.
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Affiliation(s)
- Vaidyanathan Sethuraman
- Center for Molecular Biophysics, Oak Ridge National Laboratory, 1-Bethel Valley Road, Oak Ridge, Tennessee 37830, United States
| | - Josh V Vermaas
- MSU-DOE Plant Research Laboratory and Department of Biochemistry and Molecular Biology, Michigan State University, 612 Wilson Road, East Lansing, Michigan 48824, United States
| | - Luna Liang
- Department of Chemical & Biomolecular Engineering, University of Tennessee Knoxville, Knoxville, Tennessee 37996, United States
| | - Arthur J Ragauskas
- Department of Chemical & Biomolecular Engineering, University of Tennessee Knoxville, Knoxville, Tennessee 37996, United States
- Department of Forestry, Wildlife, and Fisheries, Center for Renewable Carbon, University of Tennessee Institute of Agriculture, Knoxville, Tennessee 37996, United States
- UTK-ORNL Joint Institute for Biological Science, Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, Tennessee 37831, United States
| | - Jeremy C Smith
- Center for Molecular Biophysics, Oak Ridge National Laboratory, 1-Bethel Valley Road, Oak Ridge, Tennessee 37830, United States
- Department of Biochemistry and Cellular and Molecular Biology, University of Tennessee, Knoxville, Tennessee 37996, United States
| | - Loukas Petridis
- Center for Molecular Biophysics, Oak Ridge National Laboratory, 1-Bethel Valley Road, Oak Ridge, Tennessee 37830, United States
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78
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Dwivedi N, Yamamoto S, Zhao Y, Hou G, Bowling F, Tobimatsu Y, Liu C. Simultaneous suppression of lignin, tricin and wall-bound phenolic biosynthesis via the expression of monolignol 4-O-methyltransferases in rice. PLANT BIOTECHNOLOGY JOURNAL 2024; 22:330-346. [PMID: 37795899 PMCID: PMC10826995 DOI: 10.1111/pbi.14186] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/27/2023] [Revised: 07/14/2023] [Accepted: 09/16/2023] [Indexed: 10/06/2023]
Abstract
Grass lignocelluloses feature complex compositions and structures. In addition to the presence of conventional lignin units from monolignols, acylated monolignols and flavonoid tricin also incorporate into lignin polymer; moreover, hydroxycinnamates, particularly ferulate, cross-link arabinoxylan chains with each other and/or with lignin polymers. These structural complexities make grass lignocellulosics difficult to optimize for effective agro-industrial applications. In the present study, we assess the applications of two engineered monolignol 4-O-methyltransferases (MOMTs) in modifying rice lignocellulosic properties. Two MOMTs confer regiospecific para-methylation of monolignols but with different catalytic preferences. The expression of MOMTs in rice resulted in differential but drastic suppression of lignin deposition, showing more than 50% decrease in guaiacyl lignin and up to an 90% reduction in syringyl lignin in transgenic lines. Moreover, the levels of arabinoxylan-bound ferulate were reduced by up to 50%, and the levels of tricin in lignin fraction were also substantially reduced. Concomitantly, up to 11 μmol/g of the methanol-extractable 4-O-methylated ferulic acid and 5-7 μmol/g 4-O-methylated sinapic acid were accumulated in MOMT transgenic lines. Both MOMTs in vitro displayed discernible substrate promiscuity towards a range of phenolics in addition to the dominant substrate monolignols, which partially explains their broad effects on grass phenolic biosynthesis. The cell wall structural and compositional changes resulted in up to 30% increase in saccharification yield of the de-starched rice straw biomass after diluted acid-pretreatment. These results demonstrate an effective strategy to tailor complex grass cell walls to generate improved cellulosic feedstocks for the fermentable sugar-based production of biofuel and bio-chemicals.
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Affiliation(s)
- Nidhi Dwivedi
- Biology DepartmentBrookhaven Nation LaboratoryUptonNew YorkUSA
- Feedstocks DivisionJoint BioEnergy InstituteEmeryvilleCAUSA
| | - Senri Yamamoto
- Research Institute for Sustainable HumanosphereKyoto UniversityGokasho, UjiKyotoJapan
| | - Yunjun Zhao
- Biology DepartmentBrookhaven Nation LaboratoryUptonNew YorkUSA
| | - Guichuan Hou
- Dewel Microscopy FacilityAppalachian State UniversityBooneNorth CarolinaUSA
| | - Forrest Bowling
- Biology DepartmentBrookhaven Nation LaboratoryUptonNew YorkUSA
| | - Yuki Tobimatsu
- Research Institute for Sustainable HumanosphereKyoto UniversityGokasho, UjiKyotoJapan
| | - Chang‐Jun Liu
- Biology DepartmentBrookhaven Nation LaboratoryUptonNew YorkUSA
- Feedstocks DivisionJoint BioEnergy InstituteEmeryvilleCAUSA
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79
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Martin E, Dubessay P, Record E, Audonnet F, Michaud P. Recent advances in laccase activity assays: A crucial challenge for applications on complex substrates. Enzyme Microb Technol 2024; 173:110373. [PMID: 38091836 DOI: 10.1016/j.enzmictec.2023.110373] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/26/2023] [Revised: 12/01/2023] [Accepted: 12/06/2023] [Indexed: 12/23/2023]
Abstract
Despite being one of the first enzymes discovered in 1883, the determination of laccase activity remains a scientific challenge, and a barrier to the full use of laccase as a biocatalyst. Indeed, laccase, an oxidase of the blue multi-copper oxidases family, has a wide range of substrates including substituted phenols, aromatic amines and lignin-related compounds. Its one-electron mechanism requires only oxygen and releases water as a reaction product. These characteristics make laccase a biocatalyst of interest in many fields of applications including pulp and paper industry, biorefineries, food, textile, and pharmaceutical industries. But to fully envisage the use of laccase at an industrial scale, its activity must be reliably quantifiable on complex substrates and in complex matrices. This review aims to describe current and emerging methods for laccase activity assays and place them in the context of a potential industrial use of the enzyme.
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Affiliation(s)
- Elise Martin
- Université Clermont Auvergne, Clermont Auvergne INP, CNRS, Institut Pascal, F-63000 Clermont-Ferrand, France
| | - Pascal Dubessay
- Université Clermont Auvergne, Clermont Auvergne INP, CNRS, Institut Pascal, F-63000 Clermont-Ferrand, France
| | - Eric Record
- INRAE, Aix-Marseille Université, UMR1163, Biodiversité et Biotechnologie Fongiques, 13288 Marseille, France
| | - Fabrice Audonnet
- Université Clermont Auvergne, Clermont Auvergne INP, CNRS, Institut Pascal, F-63000 Clermont-Ferrand, France
| | - Philippe Michaud
- Université Clermont Auvergne, Clermont Auvergne INP, CNRS, Institut Pascal, F-63000 Clermont-Ferrand, France.
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80
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Lam LPY, Tobimatsu Y, Suzuki S, Tanaka T, Yamamoto S, Takeda-Kimura Y, Osakabe Y, Osakabe K, Ralph J, Bartley LE, Umezawa T. Disruption of p-coumaroyl-CoA:monolignol transferases in rice drastically alters lignin composition. PLANT PHYSIOLOGY 2024; 194:832-848. [PMID: 37831082 DOI: 10.1093/plphys/kiad549] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/16/2023] [Revised: 09/28/2023] [Accepted: 09/28/2023] [Indexed: 10/14/2023]
Abstract
Grasses are abundant feedstocks that can supply lignocellulosic biomass for production of cell-wall-derived chemicals. In grass cell walls, lignin is acylated with p-coumarate. These p-coumarate decorations arise from the incorporation of monolignol p-coumarate conjugates during lignification. A previous biochemical study identified a rice (Oryza sativa) BAHD acyltransferase (AT) with p-coumaroyl-CoA:monolignol transferase (PMT) activity in vitro. In this study, we determined that that enzyme, which we name OsPMT1 (also known as OsAT4), and the closely related OsPMT2 (OsAT3) harbor similar catalytic activity toward monolignols. We generated rice mutants deficient in either or both OsPMT1 and OsPMT2 by CRISPR/Cas9-mediated mutagenesis and subjected the mutants' cell walls to analysis using chemical and nuclear magnetic resonance methods. Our results demonstrated that OsPMT1 and OsPMT2 both function in lignin p-coumaroylation in the major vegetative tissues of rice. Notably, lignin-bound p-coumarate units were undetectable in the ospmt1 ospmt2-2 double-knockout mutant. Further, in-depth structural analysis of purified lignins from the ospmt1 ospmt2-2 mutant compared with control lignins from wild-type rice revealed stark changes in polymer structures, including alterations in syringyl/guaiacyl aromatic unit ratios and inter-monomeric linkage patterns, and increased molecular weights. Our results provide insights into lignin polymerization in grasses that will be useful for the optimization of bioengineering approaches for the effective use of biomass in biorefineries.
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Affiliation(s)
- Lydia Pui Ying Lam
- Research Institute for Sustainable Humanosphere, Kyoto University, Uji, Kyoto 611-0011, Japan
- Center for Crossover Education, Graduate School of Engineering Science, Akita University, Akita, Akita 010-0852, Japan
| | - Yuki Tobimatsu
- Research Institute for Sustainable Humanosphere, Kyoto University, Uji, Kyoto 611-0011, Japan
| | - Shiro Suzuki
- Research Institute for Sustainable Humanosphere, Kyoto University, Uji, Kyoto 611-0011, Japan
- Faculty of Applied Biological Sciences, Graduate School of Natural Science and Technology, and The United Graduate School of Agricultural Science, Gifu University, Gifu, Gifu 501-1193Japan
| | - Takuto Tanaka
- Research Institute for Sustainable Humanosphere, Kyoto University, Uji, Kyoto 611-0011, Japan
| | - Senri Yamamoto
- Research Institute for Sustainable Humanosphere, Kyoto University, Uji, Kyoto 611-0011, Japan
| | - Yuri Takeda-Kimura
- Research Institute for Sustainable Humanosphere, Kyoto University, Uji, Kyoto 611-0011, Japan
| | - Yuriko Osakabe
- School of Life Science and Technology, Tokyo Institute of Technology, Yokohama, Kanagawa 226-8502Japan
| | - Keishi Osakabe
- Faculty of Bioscience and Bioindustry, Tokushima University,Tokushima, Tokushima 770-8503Japan
| | - John Ralph
- Department of Biochemistry, and the U.S. Department of Energy Great Lakes Bioenergy Research Center, Wisconsin Energy Institute, University of Wisconsin, Madison, WI 53726, USA
| | - Laura E Bartley
- Research Institute for Sustainable Humanosphere, Kyoto University, Uji, Kyoto 611-0011, Japan
- Institute of Biological Chemistry, Washington State University, Pullman, WA 99164, USA
| | - Toshiaki Umezawa
- Research Institute for Sustainable Humanosphere, Kyoto University, Uji, Kyoto 611-0011, Japan
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81
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Thoresen P, Delgado Vellosillo I, Lange H, Rova U, Christakopoulos P, Matsakas L. Furan Distribution as a Severity Indicator upon Organosolv Fractionation of Hardwood Sawdust through a Novel Ternary Solvent System. ACS SUSTAINABLE CHEMISTRY & ENGINEERING 2024; 12:1666-1680. [PMID: 38303908 PMCID: PMC10828987 DOI: 10.1021/acssuschemeng.3c07236] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/05/2023] [Revised: 12/28/2023] [Accepted: 12/28/2023] [Indexed: 02/03/2024]
Abstract
Beech sawdust was treated with a ternary solvent system based on binary aqueous ethanol with partial substitution of ethanol by acetone at four different water contents (60, 50, 40, and 30%v/v). In addition to standard, i.e., noncatalyzed treatments, the application of inorganic acid in the form of 20 mm H2SO4 was evaluated. The various solvent systems were applied at 180 °C for 60 min. The obtained biomass fractions were characterized by standard biomass compositional methods, i.e., sugar monomer and oligomer contents, dehydration product contents of the aqueous product, and lignin, cellulose, and hemicellulose contents in isolated solid fractions. More advanced analyses were performed on the lignin fractions, including quantitative 13C NMR analyses, 1H-13C HSQC analysis, size exclusion chromatography, and pyrolysis-GC/MS, and the aqueous product, in the form of size exclusion chromatography and determination of total phenol contents. The picture emerging from the thorough analytical investigation performed on the lignin fractions is consistent with that resulting from the characterization of the other fractions: results point toward greater deconstruction of the lignocellulosic recalcitrance upon higher organic solvent content, replacing ethanol with acetone during the extraction, and upon addition of mineral acid. A pulp with cellulose content of 94.23 wt % and 95% delignification was obtained for the treatment employing a 55/30/15 EtOH/water/acetone mixture alongside 20 mm H2SO4. Furthermore, the results indicate the formation of two types of organosolv furan families during treatment, which differ in the substitution of their C1 and C5. While the traditional lignin aryl-ether linkages present themselves as indicators for process severity for the nonacid catalyzed systems, the distribution of these furan types can be applied as a severity indicator upon employment of H2SO4, including their presence in the isolated lignin fractions.
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Affiliation(s)
- Petter
Paulsen Thoresen
- Biochemical
Process Engineering, Division of Chemical Engineering, Department
of Civil, Environmental and Natural Resources Engineering, Luleå University of Technology, SE-971 87 Luleå, Sweden
| | - Irene Delgado Vellosillo
- Biochemical
Process Engineering, Division of Chemical Engineering, Department
of Civil, Environmental and Natural Resources Engineering, Luleå University of Technology, SE-971 87 Luleå, Sweden
| | - Heiko Lange
- Biochemical
Process Engineering, Division of Chemical Engineering, Department
of Civil, Environmental and Natural Resources Engineering, Luleå University of Technology, SE-971 87 Luleå, Sweden
- Department
of Earth and Environmental Sciences, University
of Milano-Bicocca, Piazza della Scienza 1, 20126 Milan, Italy
- NBFC
− National Biodiversity Future Center, 90133 Palermo, Italy
| | - Ulrika Rova
- Biochemical
Process Engineering, Division of Chemical Engineering, Department
of Civil, Environmental and Natural Resources Engineering, Luleå University of Technology, SE-971 87 Luleå, Sweden
| | - Paul Christakopoulos
- Biochemical
Process Engineering, Division of Chemical Engineering, Department
of Civil, Environmental and Natural Resources Engineering, Luleå University of Technology, SE-971 87 Luleå, Sweden
| | - Leonidas Matsakas
- Biochemical
Process Engineering, Division of Chemical Engineering, Department
of Civil, Environmental and Natural Resources Engineering, Luleå University of Technology, SE-971 87 Luleå, Sweden
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82
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Bugg TDH. The chemical logic of enzymatic lignin degradation. Chem Commun (Camb) 2024; 60:804-814. [PMID: 38165282 PMCID: PMC10795516 DOI: 10.1039/d3cc05298b] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/27/2023] [Accepted: 12/19/2023] [Indexed: 01/03/2024]
Abstract
Lignin is an aromatic heteropolymer, found in plant cell walls as 20-30% of lignocellulose. It represents the most abundant source of renewable aromatic carbon in the biosphere, hence, if it could be depolymerised efficiently, then it would be a highly valuable source of renewable aromatic chemicals. However, lignin presents a number of difficulties for biocatalytic or chemocatalytic breakdown. Research over the last 10 years has led to the identification of new bacterial enzymes for lignin degradation, and the use of metabolic engineering to generate useful bioproducts from microbial lignin degradation. The aim of this article is to discuss the chemical mechanisms used by lignin-degrading enzymes and microbes to break down lignin, and to describe current methods for generating aromatic bioproducts from lignin using enzymes and engineered microbes.
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Affiliation(s)
- Timothy D H Bugg
- Department of Chemistry, University of Warwick, Coventry CV4 7AL, UK.
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83
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Pena C, Rodil E, Rodríguez H. Capacity of Aqueous Solutions of the Ionic Liquid 1-Ethyl-3-methylimidazolium Acetate to Partially Depolymerize Lignin at Ambient Temperature and Pressure. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2024; 72:1136-1145. [PMID: 38183298 PMCID: PMC10797632 DOI: 10.1021/acs.jafc.3c04047] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/15/2023] [Revised: 12/02/2023] [Accepted: 12/22/2023] [Indexed: 01/08/2024]
Abstract
Lignin is a very attractive and abundant biopolymer with the potential to be a biorenewable source of a large number of value-added organic chemicals. The current state-of-the-art methods fail to provide efficient valorization of lignin in this regard without the involvement of harsh conditions and auxiliary substances that compromise the overall sustainability of the proposed processes. Making an original approach from the set of mildest temperature and pressure conditions, this work identifies and explores the capacity of an aqueous solution of the nonvolatile ionic liquid 1-ethyl-3-methylimidazolium acetate ([C2mim][OAc]) to partially depolymerize technical lignin (Indulin AT) by means of a treatment consisting in the simple contact at ambient temperature and pressure. Among a considerable number of valuable phenolic molecules that were identified in the resulting fluid, vanillin (yield of about 3 g/kg) and guaiacol (yield of about 1 g/kg) were the monophenolic compounds obtained in a higher concentration. The properties of the post-treatment solids recovered remain similar to those of the original lignin, although with a relatively lower abundance of guaiacyl units (in agreement with the generation of guaiacyl-derived phenolic molecules, such as vanillin and guaiacol). The assistance of the treatment with UV irradiation in the presence of nanoparticle catalysts does not lead to an improvement in the yields of phenolic compounds.
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Affiliation(s)
- Carlos
A. Pena
- CRETUS, Department of Chemical
Engineering, Universidade de Santiago de
Compostela, E-15782 Santiago de Compostela, Spain
| | - Eva Rodil
- CRETUS, Department of Chemical
Engineering, Universidade de Santiago de
Compostela, E-15782 Santiago de Compostela, Spain
| | - Héctor Rodríguez
- CRETUS, Department of Chemical
Engineering, Universidade de Santiago de
Compostela, E-15782 Santiago de Compostela, Spain
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84
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Ma JX, Wang H, Jin C, Ye YF, Tang LX, Si J, Song J. Whole genome sequencing and annotation of Daedaleopsis sinensis, a wood-decaying fungus significantly degrading lignocellulose. Front Bioeng Biotechnol 2024; 11:1325088. [PMID: 38292304 PMCID: PMC10826855 DOI: 10.3389/fbioe.2023.1325088] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/20/2023] [Accepted: 12/15/2023] [Indexed: 02/01/2024] Open
Abstract
Daedaleopsis sinensis is a fungus that grows on wood and secretes a series of enzymes to degrade cellulose, hemicellulose, and lignin and cause wood rot decay. Wood-decaying fungi have ecological, economic, edible, and medicinal functions. Furthermore, the use of microorganisms to biodegrade lignocellulose has high application value. Genome sequencing has allowed microorganisms to be analyzed from the aspects of genome characteristics, genome function annotation, metabolic pathways, and comparative genomics. Subsequently, the relevant information regarding lignocellulosic degradation has been mined by bioinformatics. Here, we sequenced and analyzed the genome of D. sinensis for the first time. A 51.67-Mb genome sequence was assembled to 24 contigs, which led to the prediction of 12,153 protein-coding genes. Kyoto Encyclopedia of Genes and Genomes database analysis of the D. sinensis data revealed that 3,831 genes are involved in almost 120 metabolic pathways. According to the Carbohydrate-Active Enzyme database, 481 enzymes are found in D. sinensis, of which glycoside hydrolases are the most abundant. The genome sequence of D. sinensis provides insights into its lignocellulosic degradation and subsequent applications.
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Affiliation(s)
- Jin-Xin Ma
- Institute of Microbiology, School of Ecology and Nature Conservation, Beijing Forestry University, Beijing, China
| | - Hao Wang
- Institute of Microbiology, School of Ecology and Nature Conservation, Beijing Forestry University, Beijing, China
| | - Can Jin
- Institute of Microbiology, School of Ecology and Nature Conservation, Beijing Forestry University, Beijing, China
| | - Yi-Fan Ye
- Institute of Microbiology, School of Ecology and Nature Conservation, Beijing Forestry University, Beijing, China
| | - Lu-Xin Tang
- Institute of Microbiology, School of Ecology and Nature Conservation, Beijing Forestry University, Beijing, China
| | - Jing Si
- Institute of Microbiology, School of Ecology and Nature Conservation, Beijing Forestry University, Beijing, China
| | - Jie Song
- Department of Horticulture and Food, Guangdong Eco-Engineering Polytechnic, Guangzhou, China
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85
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Addison B, Bu L, Bharadwaj V, Crowley MF, Harman-Ware AE, Crowley MF, Bomble YJ, Ciesielski PN. Atomistic, macromolecular model of the Populus secondary cell wall informed by solid-state NMR. SCIENCE ADVANCES 2024; 10:eadi7965. [PMID: 38170770 PMCID: PMC10776008 DOI: 10.1126/sciadv.adi7965] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/18/2023] [Accepted: 12/01/2023] [Indexed: 01/05/2024]
Abstract
Plant secondary cell walls (SCWs) are composed of a heterogeneous interplay of three major biopolymers: cellulose, hemicelluloses, and lignin. Details regarding specific intermolecular interactions and higher-order architecture of the SCW superstructure remain ambiguous. Here, we use solid-state nuclear magnetic resonance (ssNMR) measurements to infer refined details about the structural configuration, intermolecular interactions, and relative proximity of all three major biopolymers within air-dried Populus wood. To enhance the utility of these findings and enable evaluation of hypotheses in a physics-based environment in silico, the NMR observables are articulated into an atomistic, macromolecular model for biopolymer assemblies within the plant SCW. Through molecular dynamics simulation, we quantitatively evaluate several variations of atomistic models to determine structural details that are corroborated by ssNMR measurements.
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Affiliation(s)
- Bennett Addison
- Renewable Resources and Enabling Sciences Center, National Renewable Energy Laboratory, Golden, CO, USA
| | - Lintao Bu
- Renewable Resources and Enabling Sciences Center, National Renewable Energy Laboratory, Golden, CO, USA
| | - Vivek Bharadwaj
- Renewable Resources and Enabling Sciences Center, National Renewable Energy Laboratory, Golden, CO, USA
| | - Meagan F. Crowley
- Renewable Resources and Enabling Sciences Center, National Renewable Energy Laboratory, Golden, CO, USA
- Chemistry Department, Colorado School of Mines, Golden, CO, USA
| | - Anne E. Harman-Ware
- Renewable Resources and Enabling Sciences Center, National Renewable Energy Laboratory, Golden, CO, USA
| | - Michael F. Crowley
- Renewable Resources and Enabling Sciences Center, National Renewable Energy Laboratory, Golden, CO, USA
| | - Yannick J. Bomble
- Biosciences Center, National Renewable Energy Laboratory, Golden, CO, USA
| | - Peter N. Ciesielski
- Renewable Resources and Enabling Sciences Center, National Renewable Energy Laboratory, Golden, CO, USA
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86
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Reyes-Rivera J, Terrazas T. Lignin Analysis by HPLC and FTIR: Spectra Deconvolution and S/G Ratio Determination. Methods Mol Biol 2024; 2722:149-169. [PMID: 37897607 DOI: 10.1007/978-1-0716-3477-6_12] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/30/2023]
Abstract
Fourier transform infrared spectroscopy (FTIR) is a simple nondestructive technique that allows the user to obtain quick and accurate information about the structure of the constituents of wood. Spectra deconvolution is a computational technique, complementary to FTIR analysis, which improves the resolution of overlapped or unobserved bands in the raw spectra. High performance liquid chromatography (HPLC) is an analytical technique useful to determine the ratio of the lignin monomers obtained by the alkaline nitrobenzene oxidation method. Furthermore, lignin content has been commonly determined by wet chemical methods; Klason lignin determination is a quick and accessible method. Here, we detail the procedures for chemical analysis of the wood lignin using these techniques. Additionally, the deconvolution process of FTIR spectra for the determination of the S/G ratio, in lignin isolated by this or other methods, is explained in detail.
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Affiliation(s)
| | - Teresa Terrazas
- Departamento de Botánica, Instituto de Biología, UNAM, Circuito Exterior S/N, Ciudad Universitaria, Mexico City, Mexico.
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87
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Ma Q, Yu C, Zhou Y, Hu D, Chen J, Zhang X. A review on the calculation and application of lignin Hansen solubility parameters. Int J Biol Macromol 2024; 256:128506. [PMID: 38040143 DOI: 10.1016/j.ijbiomac.2023.128506] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/30/2023] [Revised: 11/24/2023] [Accepted: 11/28/2023] [Indexed: 12/03/2023]
Abstract
Hansen solubility parameters (HSPs) play a critical role in the majority of processes involving lignin depolymerization, separation, fractionation, and polymer blending, which are directly related to dissolution properties. However, the calculation of lignin HSPs is highly complicated due to the diversity of sources and the complexity of lignin structures. Despite their important role, lignin HSPs have been undervalued, attracting insufficient attention. This review summarizes the calculation methods for lignin HSPs and proposes a straightforward method based on lignin subunits. Furthermore, it highlights the crucial applications of lignin HSPs, such as identifying ideal solvents for lignin dissolution, selecting suitable solvents for lignin depolymerization and extraction, designing green solvents for lignin fractionation, and guiding the preparation of lignin-based composites. For instance, leveraging HSPs to design a series of solvents could potentially achieve sequential controllable lignin fractionation, addressing issues of low value-added applications of lignin resulting from poor homogeneity. Notably, HSPs serve as valuable tools for understanding the dissolution behavior of lignin. Consequently, we expect this review to be of great interest to researchers specializing in lignin and other macromolecules.
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Affiliation(s)
- Qingzhi Ma
- Key Laboratory of Recycling and Eco-treatment of Waste Biomass of Zhejiang Province, Zhejiang University of Science and Technology, Hangzhou 310023, China.
| | - Changqing Yu
- Provincial Key Laboratory of New Polyolefin Materials, School of Chemistry & Chemical Engineering, Northeast Petroleum University, Daqing 163318, China
| | - Yuran Zhou
- Winbon Schoeller New Materials Co., Ltd., Quzhou 324400, China
| | - Dinggen Hu
- Winbon Schoeller New Materials Co., Ltd., Quzhou 324400, China
| | - Jianbin Chen
- Key Laboratory of Recycling and Eco-treatment of Waste Biomass of Zhejiang Province, Zhejiang University of Science and Technology, Hangzhou 310023, China; Winbon Schoeller New Materials Co., Ltd., Quzhou 324400, China
| | - Xuejin Zhang
- Key Laboratory of Recycling and Eco-treatment of Waste Biomass of Zhejiang Province, Zhejiang University of Science and Technology, Hangzhou 310023, China.
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88
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Li W, Lin YCJ, Chen YL, Zhou C, Li S, De Ridder N, Oliveira DM, Zhang L, Zhang B, Wang JP, Xu C, Fu X, Luo K, Wu AM, Demura T, Lu MZ, Zhou Y, Li L, Umezawa T, Boerjan W, Chiang VL. Woody plant cell walls: Fundamentals and utilization. MOLECULAR PLANT 2024; 17:112-140. [PMID: 38102833 DOI: 10.1016/j.molp.2023.12.008] [Citation(s) in RCA: 4] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/31/2023] [Revised: 12/12/2023] [Accepted: 12/12/2023] [Indexed: 12/17/2023]
Abstract
Cell walls in plants, particularly forest trees, are the major carbon sink of the terrestrial ecosystem. Chemical and biosynthetic features of plant cell walls were revealed early on, focusing mostly on herbaceous model species. Recent developments in genomics, transcriptomics, epigenomics, transgenesis, and associated analytical techniques are enabling novel insights into formation of woody cell walls. Here, we review multilevel regulation of cell wall biosynthesis in forest tree species. We highlight current approaches to engineering cell walls as potential feedstock for materials and energy and survey reported field tests of such engineered transgenic trees. We outline opportunities and challenges in future research to better understand cell type biogenesis for more efficient wood cell wall modification and utilization for biomaterials or for enhanced carbon capture and storage.
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Affiliation(s)
- Wei Li
- State Key Laboratory of Tree Genetics and Breeding, Northeast Forestry University, Harbin 150040, China
| | | | - Ying-Lan Chen
- Department of Biotechnology and Bioindustry Sciences, College of Bioscience and Biotechnology, National Cheng Kung University, Tainan, Taiwan, China
| | - Chenguang Zhou
- State Key Laboratory of Tree Genetics and Breeding, Northeast Forestry University, Harbin 150040, China
| | - Shuang Li
- State Key Laboratory of Tree Genetics and Breeding, Northeast Forestry University, Harbin 150040, China
| | - Nette De Ridder
- Department of Plant Biotechnology and Bioinformatics, Ghent University, Technologiepark 71, 9052 Ghent, Belgium; VIB Center for Plant Systems Biology, Technologiepark 71, 9052 Ghent, Belgium
| | - Dyoni M Oliveira
- Department of Plant Biotechnology and Bioinformatics, Ghent University, Technologiepark 71, 9052 Ghent, Belgium; VIB Center for Plant Systems Biology, Technologiepark 71, 9052 Ghent, Belgium
| | - Lanjun Zhang
- State Key Laboratory of Plant Genomics, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100101, China
| | - Baocai Zhang
- State Key Laboratory of Plant Genomics, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100101, China; University of Chinese Academy of Sciences, Beijing 100049, China
| | - Jack P Wang
- Forest Biotechnology Group, Department of Forestry and Environmental Resources, North Carolina State University, Raleigh, NC 27695, USA
| | - Changzheng Xu
- Chongqing Key Laboratory of Plant Resource Conservation and Germplasm Innovation, Integrative Science Center of Germplasm Creation, School of Life Sciences, Southwest University, Chongqing 400715, China
| | - Xiaokang Fu
- Chongqing Key Laboratory of Plant Resource Conservation and Germplasm Innovation, Integrative Science Center of Germplasm Creation, School of Life Sciences, Southwest University, Chongqing 400715, China
| | - Keming Luo
- Chongqing Key Laboratory of Plant Resource Conservation and Germplasm Innovation, Integrative Science Center of Germplasm Creation, School of Life Sciences, Southwest University, Chongqing 400715, China
| | - Ai-Min Wu
- Guangdong Key Laboratory for Innovative Development and Utilization of Forest Plant Germplasm, College of Forestry and Landscape Architectures, South China Agricultural University, Guangzhou 510642, China
| | - Taku Demura
- Center for Digital Green-innovation, Nara Institute of Science and Technology, Ikoma, Nara 630-0192, Japan
| | - Meng-Zhu Lu
- State Key Laboratory of Subtropical Silviculture, College of Forestry and Biotechnology, Zhejiang A & F University, Hangzhou 311300, China
| | - Yihua Zhou
- State Key Laboratory of Plant Genomics, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100101, China; University of Chinese Academy of Sciences, Beijing 100049, China
| | - Laigeng Li
- CAS Center for Excellence in Molecular Plant Sciences, Chinese Academy of Sciences, 300 Fenglin Road, Shanghai 200032, China
| | - Toshiaki Umezawa
- Laboratory of Metabolic Science of Forest Plants and Microorganisms, Research Institute for Sustainable Humanosphere, Kyoto University, Uji, Kyoto 611-0011, Japan
| | - Wout Boerjan
- Department of Plant Biotechnology and Bioinformatics, Ghent University, Technologiepark 71, 9052 Ghent, Belgium; VIB Center for Plant Systems Biology, Technologiepark 71, 9052 Ghent, Belgium
| | - Vincent L Chiang
- State Key Laboratory of Tree Genetics and Breeding, Northeast Forestry University, Harbin 150040, China; Forest Biotechnology Group, Department of Forestry and Environmental Resources, North Carolina State University, Raleigh, NC 27695, USA.
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89
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Syed MH, Khan MMR, Zahari MAKM, Beg MDH, Abdullah N. Current issues and potential solutions for the electrospinning of major polysaccharides and proteins: A review. Int J Biol Macromol 2023; 253:126735. [PMID: 37690643 DOI: 10.1016/j.ijbiomac.2023.126735] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/13/2023] [Revised: 09/03/2023] [Accepted: 09/04/2023] [Indexed: 09/12/2023]
Abstract
Biopolymers, especially polysaccharides and proteins, are the promising green replacement for petroleum based polymers. Due to their innate properties, they are effectively used in biomedical applications, especially tissue engineering, wound healing, and drug delivery. The fibrous morphology of biopolymers is essentially required for the effectiveness in these biomedical applications. Electrospinning (ES) is the most advanced and robust method to fabricate nanofibers (NFs) and provides a complete solution to the conventional methods issues. However, the major issues regarding fabricating polysaccharides and protein nanofibers using ES include poor electrospinnability, lack of desired fundamental properties for a specific application by a single biopolymer, and insolubility among common solvents. The current review provides the main strategies for effective electrospinning of the major biopolymers. The key strategies include blending major biopolymers with suitable biopolymers and optimizing the solvent system. A systematic literature review was done to provide the optimized solvent system of the major biopolymers along with their best possible biopolymeric blend for ES. The review also highlights the fundamental issues with the commercialization of ES based biomedical products and provides future directions to improve the fabrication of biopolymeric nanofibers.
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Affiliation(s)
- Murtaza Haider Syed
- Faculty of Chemical and Process Engineering Technology, Universiti Malaysia Pahang Al-Sultan Abdullah, Gambang, Pahang, Malaysia
| | - Md Maksudur Rahman Khan
- Petroleum and Chemical Engineering Programme Area, Faculty of Engineering, Universiti Teknologi Brunei, Gadong BE1410, Brunei
| | - Mior Ahmad Khushairi Mohd Zahari
- Faculty of Chemical and Process Engineering Technology, Universiti Malaysia Pahang Al-Sultan Abdullah, Gambang, Pahang, Malaysia.
| | | | - Norhayati Abdullah
- Faculty of Chemical and Process Engineering Technology, Universiti Malaysia Pahang Al-Sultan Abdullah, Gambang, Pahang, Malaysia.
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90
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Ma CY, Luo XT, Xu LH, Sun Q, Wen JL, Liang XF, Liu HZ, Yuan TQ. Structural elucidation and targeted valorization of untractable lignin from pre-hydrolysis liquor of xylose production via a simple and robust separation approach. Int J Biol Macromol 2023; 253:127029. [PMID: 37742903 DOI: 10.1016/j.ijbiomac.2023.127029] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/03/2023] [Revised: 09/14/2023] [Accepted: 09/21/2023] [Indexed: 09/26/2023]
Abstract
Effective separation of lignin macromolecules from the xylose pre-hydrolysates (XPH) during the xylose production, thus optimizing the separation and purification process of xylose, is of great significance for reducing the production costs, achieving the high value-added utilization of lignin and increasing the industrial revenue. In this study, a simple and robust method (pH adjustment) for the separation of lignin from XPH was proposed and systematically compared with the conventional acid-promoted lignin precipitation method. The results showed that the lignin removal ratio (up to 60.34 %) of this simple method was higher than that of the conventional method, and the proposed method eliminated the necessity of heating and specialized equipment, which greatly reduced the separation cost. Meanwhile, this simple method does not destroy the components in XPH (especially xylose), ensuring the yield of the target product. On the other hand, the obtained lignin was nano-scale with less condensed structures, which also possessed small molecular weights with narrow distribution, excellent antioxidant activity (8-14 times higher than commercial antioxidants) and UV protection properties. In conclusion, the proposed simple separation method could effectively separate lignin from XPH at low cost, and the obtained lignin had potential commercial applications, which would further enhance the overall profitability of industrial production.
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Affiliation(s)
- Cheng-Ye Ma
- Beijing Key Laboratory of Lignocellulosic Chemistry, Beijing Forestry University, No. 35 Tsinghua East Road, Haidian District, Beijing 100083, China
| | - Xi-Tao Luo
- CAS Key Laboratory of Bio-Based Materials, Qingdao Institute of Bioenergy and Bioprocess Technology (QIBEBT), Chinese Academy of Sciences (CAS), Qingdao 266101, China; University of Chinese Academy of Sciences, Beijing 100049, China
| | - Ling-Hua Xu
- Beijing Key Laboratory of Lignocellulosic Chemistry, Beijing Forestry University, No. 35 Tsinghua East Road, Haidian District, Beijing 100083, China
| | - Qian Sun
- Beijing Key Laboratory of Lignocellulosic Chemistry, Beijing Forestry University, No. 35 Tsinghua East Road, Haidian District, Beijing 100083, China
| | - Jia-Long Wen
- Beijing Key Laboratory of Lignocellulosic Chemistry, Beijing Forestry University, No. 35 Tsinghua East Road, Haidian District, Beijing 100083, China.
| | - Xiang-Feng Liang
- CAS Key Laboratory of Bio-Based Materials, Qingdao Institute of Bioenergy and Bioprocess Technology (QIBEBT), Chinese Academy of Sciences (CAS), Qingdao 266101, China; University of Chinese Academy of Sciences, Beijing 100049, China.
| | - Hui-Zhou Liu
- CAS Key Laboratory of Bio-Based Materials, Qingdao Institute of Bioenergy and Bioprocess Technology (QIBEBT), Chinese Academy of Sciences (CAS), Qingdao 266101, China; University of Chinese Academy of Sciences, Beijing 100049, China
| | - Tong-Qi Yuan
- Beijing Key Laboratory of Lignocellulosic Chemistry, Beijing Forestry University, No. 35 Tsinghua East Road, Haidian District, Beijing 100083, China
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91
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Chen M, Ralph J, Luterbacher JS, Shi QS, Xie X. Selecting Suitable Near-Native Lignins for Research. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2023; 71:20751-20761. [PMID: 38065961 DOI: 10.1021/acs.jafc.3c04973] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/28/2023]
Abstract
There are several methods to isolate near-native lignins, including milled-wood lignin, enzymatic lignin, cellulolytic enzyme lignin, and enzymatic mild-acidolysis lignin. Which one is the most representative of the native lignin? Herein, near-native lignins were isolated from different plant groups and structurally analyzed to determine how well these lignins represented their native lignin counterparts. Analytical methods were applied to understand the molecular weight, monomer composition, and distribution of interunit linkages in the structure of the lignins. The results indicated that either enzymatic lignin or cellulolytic enzyme lignin may be used to represent native lignin in softwoods and hardwoods. None of the lignins, however, appeared to represent native lignins in grasses (monocot plants) because of substantial syringyl/guaiacyl differences. Complicating the understanding of grass lignin structure, large amounts of hydroxycinnamates acylate their polysaccharides and, when released, are often conflated with actual lignin monomers.
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Affiliation(s)
- Mingjie Chen
- Key Laboratory of Agricultural Microbiomics and Precision Application (MARA), Guangdong Provincial Key Laboratory of Microbial Culture Collection and Application, Key Laboratory of Agricultural Microbiome (MARA), State Key Laboratory of Applied Microbiology Southern China, Institute of Microbiology, Guangdong Academy of Sciences, Guangzhou 510070, People's Republic of China
| | - John Ralph
- Department of Energy, Great Lakes Bioenergy Research Center, Wisconsin Energy Institute, Madison, Wisconsin 53726, United States
- Department of Biochemistry, University of Wisconsin-Madison, Madison, Wisconsin 53706, United States
| | - Jeremy S Luterbacher
- Institute of Chemical Sciences and Engineering, École Polytechnique Fédérale de Lausanne, Lausanne 1015, Switzerland
| | - Qing-Shan Shi
- Key Laboratory of Agricultural Microbiomics and Precision Application (MARA), Guangdong Provincial Key Laboratory of Microbial Culture Collection and Application, Key Laboratory of Agricultural Microbiome (MARA), State Key Laboratory of Applied Microbiology Southern China, Institute of Microbiology, Guangdong Academy of Sciences, Guangzhou 510070, People's Republic of China
| | - Xiaobao Xie
- Key Laboratory of Agricultural Microbiomics and Precision Application (MARA), Guangdong Provincial Key Laboratory of Microbial Culture Collection and Application, Key Laboratory of Agricultural Microbiome (MARA), State Key Laboratory of Applied Microbiology Southern China, Institute of Microbiology, Guangdong Academy of Sciences, Guangzhou 510070, People's Republic of China
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92
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Tanis MH, Wallberg O, Galbe M, Al-Rudainy B. Lignin Extraction by Using Two-Step Fractionation: A Review. Molecules 2023; 29:98. [PMID: 38202680 PMCID: PMC10779531 DOI: 10.3390/molecules29010098] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/27/2023] [Revised: 12/12/2023] [Accepted: 12/19/2023] [Indexed: 01/12/2024] Open
Abstract
Lignocellulosic biomass represents the most abundant renewable carbon source on earth and is already used for energy and biofuel production. The pivotal step in the conversion process involving lignocellulosic biomass is pretreatment, which aims to disrupt the lignocellulose matrix. For effective pretreatment, a comprehensive understanding of the intricate structure of lignocellulose and its compositional properties during component disintegration and subsequent conversion is essential. The presence of lignin-carbohydrate complexes and covalent interactions between them within the lignocellulosic matrix confers a distinctively labile nature to hemicellulose. Meanwhile, the recalcitrant characteristics of lignin pose challenges in the fractionation process, particularly during delignification. Delignification is a critical step that directly impacts the purity of lignin and facilitates the breakdown of bonds involving lignin and lignin-carbohydrate complexes surrounding cellulose. This article discusses a two-step fractionation approach for efficient lignin extraction, providing viable paths for lignin-based valorization described in the literature. This approach allows for the creation of individual process streams for each component, tailored to extract their corresponding compounds.
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Affiliation(s)
| | | | | | - Basel Al-Rudainy
- Department of Chemical Engineering, Lund University, P.O. Box 124, SE-221 00 Lund, Sweden; (M.H.T.); (O.W.); (M.G.)
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93
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Liszka A, Wightman R, Latowski D, Bourdon M, Krogh KBRM, Pietrzykowski M, Lyczakowski JJ. Structural differences of cell walls in earlywood and latewood of Pinus sylvestris and their contribution to biomass recalcitrance. FRONTIERS IN PLANT SCIENCE 2023; 14:1283093. [PMID: 38148867 PMCID: PMC10749964 DOI: 10.3389/fpls.2023.1283093] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 08/25/2023] [Accepted: 11/13/2023] [Indexed: 12/28/2023]
Abstract
Scots pine (Pinus sylvestris L.) is an evergreen coniferous tree with wide distribution and good growth performance in a range of habitats. Therefore, wood from P. sylvestris is produced in many managed forests and is frequently used in industry. Despite the importance of pine wood, we still do not fully understand its molecular structure what limits improvements in its processing. One of the basic features leading to variation in wood properties is the presence of earlywood and latewood which form annual growth rings. Here, we characterise biochemical traits that differentiate cell walls of earlywood and latewood in Scots pine. We discover that latewood is less recalcitrant to enzymatic digestion, with galactoglucomannan showing particularly pronounced difference in accessibility. Interestingly, characterisation of lignin reveals a higher proportion of coniferaldehydes in pine latewood and suggests the presence of a different linkage landscape in this wood type. With complementary analysis of wood polysaccharides this enabled us to propose the first detailed molecular model of earlywood and latewood and to conclude that the variation in lignin structure is likely the main determinant of differences in recalcitrance observed between the two wood types in pine. Our discoveries lay the foundation for improvements in industrial processes that use pine wood since we show clear pathways for increasing the efficiency of enzymatic processing of this renewable material. Our work will help guide future breeding of pine trees with desired timber properties and can help link molecular structure of softwood cell walls to function of the different types of xylem in conifers.
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Affiliation(s)
- Aleksandra Liszka
- Department of Plant Biotechnology, Faculty of Biochemistry, Biophysics and Biotechnology, Jagiellonian University, Krakow, Poland
- Jagiellonian University, Doctoral School of Exact and Natural Sciences, Krakow, Poland
| | - Raymond Wightman
- Microscopy Core Facility, Sainsbury Laboratory, University of Cambridge, Cambridge, United Kingdom
| | - Dariusz Latowski
- Department of Plant Physiology and Biochemistry, Faculty of Biochemistry, Biophysics and Biotechnology, Jagiellonian University, Krakow, Poland
| | - Matthieu Bourdon
- Sainsbury Laboratory, University of Cambridge, Cambridge, United Kingdom
| | | | - Marcin Pietrzykowski
- Department of Ecological Engineering and Forest Hydrology, Faculty of Forestry, University of Agriculture in Krakow, Krakow, Poland
| | - Jan J. Lyczakowski
- Department of Plant Biotechnology, Faculty of Biochemistry, Biophysics and Biotechnology, Jagiellonian University, Krakow, Poland
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94
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Vanacore MFG, Sartori M, Giordanino F, Barros G, Nesci A, García D. Physiological Effects of Microbial Biocontrol Agents in the Maize Phyllosphere. PLANTS (BASEL, SWITZERLAND) 2023; 12:4082. [PMID: 38140407 PMCID: PMC10747270 DOI: 10.3390/plants12244082] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/17/2023] [Revised: 11/29/2023] [Accepted: 12/01/2023] [Indexed: 12/24/2023]
Abstract
In a world with constant population growth, and in the context of climate change, the need to supply the demand of safe crops has stimulated an interest in ecological products that can increase agricultural productivity. This implies the use of beneficial organisms and natural products to improve crop performance and control pests and diseases, replacing chemical compounds that can affect the environment and human health. Microbial biological control agents (MBCAs) interact with pathogens directly or by inducing a physiological state of resistance in the plant. This involves several mechanisms, like interference with phytohormone pathways and priming defensive compounds. In Argentina, one of the world's main maize exporters, yield is restricted by several limitations, including foliar diseases such as common rust and northern corn leaf blight (NCLB). Here, we discuss the impact of pathogen infection on important food crops and MBCA interactions with the plant's immune system, and its biochemical indicators such as phytohormones, reactive oxygen species, phenolic compounds and lytic enzymes, focused mainly on the maize-NCLB pathosystem. MBCA could be integrated into disease management as a mechanism to improve the plant's inducible defences against foliar diseases. However, there is still much to elucidate regarding plant responses when exposed to hemibiotrophic pathogens.
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Affiliation(s)
- María Fiamma Grossi Vanacore
- PHD Student Laboratorio de Ecología Microbiana, Departamento de Microbiología e Inmunología, Facultad de Ciencias Exactas, Físico-Químicas y Naturales, Universidad Nacional de Río Cuarto, Ruta 36 km 601, Río Cuarto 5800, Córdoba, Argentina;
| | - Melina Sartori
- Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), Laboratorio de Ecología Microbiana, Departamento de Microbiología e Inmunología, Facultad de Ciencias Exactas, Físico-Químicas y Naturales, Universidad Nacional de Río Cuarto, Ruta 36 km 601, Río Cuarto 5800, Córdoba, Argentina; (M.S.); (G.B.); (A.N.)
| | - Francisco Giordanino
- Microbiology Student Laboratorio de Ecología Microbiana, Departamento de Microbiología e Inmunología, Facultad de Ciencias Exactas, Físico-Químicas y Naturales, Universidad Nacional de Río Cuarto, Ruta 36 km 601, Río Cuarto 5800, Córdoba, Argentina;
| | - Germán Barros
- Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), Laboratorio de Ecología Microbiana, Departamento de Microbiología e Inmunología, Facultad de Ciencias Exactas, Físico-Químicas y Naturales, Universidad Nacional de Río Cuarto, Ruta 36 km 601, Río Cuarto 5800, Córdoba, Argentina; (M.S.); (G.B.); (A.N.)
| | - Andrea Nesci
- Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), Laboratorio de Ecología Microbiana, Departamento de Microbiología e Inmunología, Facultad de Ciencias Exactas, Físico-Químicas y Naturales, Universidad Nacional de Río Cuarto, Ruta 36 km 601, Río Cuarto 5800, Córdoba, Argentina; (M.S.); (G.B.); (A.N.)
| | - Daiana García
- Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), Laboratorio de Ecología Microbiana, Departamento de Microbiología e Inmunología, Facultad de Ciencias Exactas, Físico-Químicas y Naturales, Universidad Nacional de Río Cuarto, Ruta 36 km 601, Río Cuarto 5800, Córdoba, Argentina; (M.S.); (G.B.); (A.N.)
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95
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Davidson DJ, McKay AP, Cordes DB, Woollins JD, Westwood NJ. The Covalent Linking of Organophosphorus Heterocycles to Date Palm Wood-Derived Lignin: Hunting for New Materials with Flame-Retardant Potential. Molecules 2023; 28:7885. [PMID: 38067614 PMCID: PMC10707890 DOI: 10.3390/molecules28237885] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/13/2023] [Revised: 11/19/2023] [Accepted: 11/24/2023] [Indexed: 07/03/2024] Open
Abstract
Environmentally acceptable and renewably sourced flame retardants are in demand. Recent studies have shown that the incorporation of the biopolymer lignin into a polymer can improve its ability to form a char layer upon heating to a high temperature. Char layer formation is a central component of flame-retardant activity. The covalent modification of lignin is an established technique that is being applied to the development of potential flame retardants. In this study, four novel modified lignins were prepared, and their char-forming abilities were assessed using thermogravimetric analysis. The lignin was obtained from date palm wood using a butanosolv pretreatment. The removal of the majority of the ester groups from this heavily acylated lignin was achieved via alkaline hydrolysis. The subsequent modification of the lignin involved the incorporation of an azide functional group and copper-catalysed azide-alkyne cycloaddition reactions. These reactions enabled novel organophosphorus heterocycles to be linked to the lignin. Our preliminary results suggest that the modified lignins had improved char-forming activity compared to the controls. 31P and HSQC NMR and small-molecule X-ray crystallography were used to analyse the prepared compounds and lignins.
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Affiliation(s)
- Daniel J. Davidson
- School of Chemistry, University of St Andrews and EaStCHEM, North Haugh, St Andrews KY16 9ST, UK; (D.J.D.); (A.P.M.); (J.D.W.)
- Biomedical Sciences Research Complex, University of St Andrews, North Haugh, St Andrews KY16 9ST, UK
| | - Aidan P. McKay
- School of Chemistry, University of St Andrews and EaStCHEM, North Haugh, St Andrews KY16 9ST, UK; (D.J.D.); (A.P.M.); (J.D.W.)
| | - David B. Cordes
- School of Chemistry, University of St Andrews and EaStCHEM, North Haugh, St Andrews KY16 9ST, UK; (D.J.D.); (A.P.M.); (J.D.W.)
| | - J. Derek Woollins
- School of Chemistry, University of St Andrews and EaStCHEM, North Haugh, St Andrews KY16 9ST, UK; (D.J.D.); (A.P.M.); (J.D.W.)
- Department of Chemistry, Khalifa University, Abu Dhabi 127788, United Arab Emirates
| | - Nicholas J. Westwood
- School of Chemistry, University of St Andrews and EaStCHEM, North Haugh, St Andrews KY16 9ST, UK; (D.J.D.); (A.P.M.); (J.D.W.)
- Biomedical Sciences Research Complex, University of St Andrews, North Haugh, St Andrews KY16 9ST, UK
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96
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Yang W, Yao D, Duan H, Zhang J, Cai Y, Lan C, Zhao B, Mei Y, Zheng Y, Yang E, Lu X, Zhang X, Tang J, Yu K, Zhang X. VAMP726 from maize and Arabidopsis confers pollen resistance to heat and UV radiation by influencing lignin content of sporopollenin. PLANT COMMUNICATIONS 2023; 4:100682. [PMID: 37691288 PMCID: PMC10721520 DOI: 10.1016/j.xplc.2023.100682] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/20/2023] [Revised: 08/28/2023] [Accepted: 08/31/2023] [Indexed: 09/12/2023]
Abstract
Sporopollenin in the pollen cell wall protects male gametophytes from stresses. Phenylpropanoid derivatives, including guaiacyl (G) lignin units, are known to be structural components of sporopollenin, but the exact composition of sporopollenin remains to be fully resolved. We analyzed the phenylpropanoid derivatives in sporopollenin from maize and Arabidopsis by thioacidolysis coupled with nuclear magnetic resonance (NMR) and gas chromatography-mass spectrometry (GC-MS). The NMR and GC-MS results confirmed the presence of p-hydroxyphenyl (H), G, and syringyl (S) lignin units in sporopollenin from maize and Arabidopsis. Strikingly, H units account for the majority of lignin monomers in sporopollenin from these species. We next performed a genome-wide association study to explore the genetic basis of maize sporopollenin composition and identified a vesicle-associated membrane protein (ZmVAMP726) that is strongly associated with lignin monomer composition of maize sporopollenin. Genetic manipulation of VAMP726 affected not only lignin monomer composition in sporopollenin but also pollen resistance to heat and UV radiation in maize and Arabidopsis, indicating that VAMP726 is functionally conserved in monocot and dicot plants. Our work provides new insight into the lignin monomers that serve as structural components of sporopollenin and characterizes VAMP726, which affects sporopollenin composition and stress resistance in pollen.
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Affiliation(s)
- Wenqi Yang
- State Key Laboratory of Crop Stress Adaptation and Improvement, Henan Joint International Laboratory for Crop Multi-Omics Research, School of Life Sciences, Henan University, Kaifeng 475004, China
| | - Dongdong Yao
- State Key Laboratory of Crop Stress Adaptation and Improvement, Henan Joint International Laboratory for Crop Multi-Omics Research, School of Life Sciences, Henan University, Kaifeng 475004, China
| | - Haiyang Duan
- National Key Laboratory of Wheat and Maize Crop Science, College of Agronomy, Henan Agricultural University, Zhengzhou 450002, China
| | - Junli Zhang
- State Key Laboratory of Crop Stress Adaptation and Improvement, Henan Joint International Laboratory for Crop Multi-Omics Research, School of Life Sciences, Henan University, Kaifeng 475004, China; National Key Laboratory of Wheat and Maize Crop Science, College of Agronomy, Henan Agricultural University, Zhengzhou 450002, China
| | - Yaling Cai
- State Key Laboratory of Crop Stress Adaptation and Improvement, Henan Joint International Laboratory for Crop Multi-Omics Research, School of Life Sciences, Henan University, Kaifeng 475004, China
| | - Chen Lan
- State Key Laboratory of Crop Stress Adaptation and Improvement, Henan Joint International Laboratory for Crop Multi-Omics Research, School of Life Sciences, Henan University, Kaifeng 475004, China
| | - Bing Zhao
- State Key Laboratory of Crop Stress Adaptation and Improvement, Henan Joint International Laboratory for Crop Multi-Omics Research, School of Life Sciences, Henan University, Kaifeng 475004, China
| | - Yong Mei
- State Key Laboratory of Crop Stress Adaptation and Improvement, Henan Joint International Laboratory for Crop Multi-Omics Research, School of Life Sciences, Henan University, Kaifeng 475004, China
| | - Yan Zheng
- State Key Laboratory of Crop Stress Adaptation and Improvement, Henan Joint International Laboratory for Crop Multi-Omics Research, School of Life Sciences, Henan University, Kaifeng 475004, China
| | - Erbing Yang
- College of Chemistry, Zhengzhou University, Zhengzhou 450001, China
| | - Xiaoduo Lu
- National Engineering Laboratory of Crop Stress Resistance, School of Life Science, Anhui Agricultural University, Hefei 230036, China
| | - Xuehai Zhang
- National Key Laboratory of Wheat and Maize Crop Science, College of Agronomy, Henan Agricultural University, Zhengzhou 450002, China
| | - Jihua Tang
- National Key Laboratory of Wheat and Maize Crop Science, College of Agronomy, Henan Agricultural University, Zhengzhou 450002, China; The Shennong Laboratory, Zhengzhou 450002, China
| | - Ke Yu
- State Key Laboratory of Crop Stress Adaptation and Improvement, Henan Joint International Laboratory for Crop Multi-Omics Research, School of Life Sciences, Henan University, Kaifeng 475004, China.
| | - Xuebin Zhang
- State Key Laboratory of Crop Stress Adaptation and Improvement, Henan Joint International Laboratory for Crop Multi-Omics Research, School of Life Sciences, Henan University, Kaifeng 475004, China.
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97
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Mota IF, Antunes F, Fangueiro JF, Costa CAE, Rodrigues AE, Pintado ME, Costa PS. Sugarcane Light-Colored Lignin: A Renewable Resource for Sustainable Beauty. Int J Mol Sci 2023; 24:15941. [PMID: 37958924 PMCID: PMC10648998 DOI: 10.3390/ijms242115941] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/27/2023] [Revised: 10/25/2023] [Accepted: 10/28/2023] [Indexed: 11/15/2023] Open
Abstract
Lignin has emerged as a promising eco-friendly multifunctional ingredient for cosmetic applications, due to its ability to protect against ultraviolet radiation and its antioxidant and antimicrobial properties. However, its typical dark color and low water solubility limit its application in cosmetics. This study presents a simple process for obtaining light-colored lignin (LCLig) from sugarcane bagasse (SCB) alkaline black liquor, involving an oxidation treatment with hydrogen peroxide, followed by precipitation with sulfuric acid. The physico-chemical characterization, antioxidant and emulsifying potential of LCLig, and determination of its safety and stability in an oil-in-water emulsion were performed. A high-purity lignin (81.6%) with improved water solubility was obtained, as a result of the balance between the total aromatic phenolic units and the carboxylic acids. In addition, the antioxidant and emulsifying capacities of the obtained LCLig were demonstrated. The color reduction treatment did not compromise the safety of lignin for topical cosmetic applications. The emulsion was stable in terms of organoleptic properties (color, pH, and viscosity) and antioxidant activity over 3 months at 4, 25, and 40 °C.
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Affiliation(s)
- Inês F. Mota
- CBQF—Centro de Biotecnologia e Química Fina—Laboratório Associado, Escola Superior de Biotecnologia, Universidade Católica Portuguesa, Rua Diogo Botelho 1327, 4169-005 Porto, Portugal; (I.F.M.); (F.A.); (J.F.F.); (M.E.P.)
| | - Filipa Antunes
- CBQF—Centro de Biotecnologia e Química Fina—Laboratório Associado, Escola Superior de Biotecnologia, Universidade Católica Portuguesa, Rua Diogo Botelho 1327, 4169-005 Porto, Portugal; (I.F.M.); (F.A.); (J.F.F.); (M.E.P.)
- Amyris Bio Products Portugal Unipessoal Lda, Rua Diogo Botelho 1327, 4169-005 Porto, Portugal
| | - Joana F. Fangueiro
- CBQF—Centro de Biotecnologia e Química Fina—Laboratório Associado, Escola Superior de Biotecnologia, Universidade Católica Portuguesa, Rua Diogo Botelho 1327, 4169-005 Porto, Portugal; (I.F.M.); (F.A.); (J.F.F.); (M.E.P.)
| | - Carina A. E. Costa
- LSRE-LCM—Laboratory of Separation and Reaction Engineering—Laboratory of Catalysis and Materials, Faculty of Engineering, University of Porto, Rua Dr. Roberto Frias, 4200-465 Porto, Portugal;
- ALiCE—Associate Laboratory in Chemical Engineering, Faculty of Engineering, University of Porto, Rua Dr. Roberto Frias, 4200-465 Porto, Portugal
| | - Alírio E. Rodrigues
- LSRE-LCM—Laboratory of Separation and Reaction Engineering—Laboratory of Catalysis and Materials, Faculty of Engineering, University of Porto, Rua Dr. Roberto Frias, 4200-465 Porto, Portugal;
- ALiCE—Associate Laboratory in Chemical Engineering, Faculty of Engineering, University of Porto, Rua Dr. Roberto Frias, 4200-465 Porto, Portugal
| | - Manuela E. Pintado
- CBQF—Centro de Biotecnologia e Química Fina—Laboratório Associado, Escola Superior de Biotecnologia, Universidade Católica Portuguesa, Rua Diogo Botelho 1327, 4169-005 Porto, Portugal; (I.F.M.); (F.A.); (J.F.F.); (M.E.P.)
| | - Patrícia S. Costa
- CBQF—Centro de Biotecnologia e Química Fina—Laboratório Associado, Escola Superior de Biotecnologia, Universidade Católica Portuguesa, Rua Diogo Botelho 1327, 4169-005 Porto, Portugal; (I.F.M.); (F.A.); (J.F.F.); (M.E.P.)
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98
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Letourneau DR, Marzullo BP, Alexandridou A, Barrow MP, O'Connor PB, Volmer DA. Characterizing lignins from various sources and treatment processes after optimized sample preparation techniques and analysis via ESI-HRMS and custom mass defect software tools. Anal Bioanal Chem 2023; 415:6663-6675. [PMID: 37714972 PMCID: PMC10598097 DOI: 10.1007/s00216-023-04942-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/18/2023] [Revised: 09/05/2023] [Accepted: 09/06/2023] [Indexed: 09/17/2023]
Abstract
Sample preparation of complex, natural mixtures such as lignin prior to mass spectrometry analysis, however minimal, is a critical step in ensuring accurate and interference-free results. Modern shotgun-MS techniques, where samples are directly injected into a high-resolution mass spectrometer (HRMS) with no prior separation, usually still require basic sample pretreatment such as filtration and appropriate solvents for full dissolution and compatibility with atmospheric pressure ionization interfaces. In this study, sample preparation protocols have been established for a unique sample set consisting of a wide variety of degraded lignin samples from numerous sources and treatment processes. The samples were analyzed via electrospray (ESI)-HRMS in negative and positive ionization modes. The resulting information-rich HRMS datasets were then transformed into the mass defect space with custom R scripts as well as the open-source Constellation software as an effective way to visualize changes between the samples due to the sample preparation and ionization conditions as well as a starting point for comprehensive characterization of these varied sample sets. Optimized conditions for the four investigated lignins are proposed for ESI-HRMS analysis for the first time, giving an excellent starting point for future studies seeking to better characterize and understand these complex mixtures.
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Affiliation(s)
- Dane R Letourneau
- Department of Chemistry, Humboldt University Berlin, 12489, Berlin, Germany
| | - Bryan P Marzullo
- Department of Chemistry, University of Warwick, Coventry, CV4 7AL, UK
| | | | - Mark P Barrow
- Department of Chemistry, University of Warwick, Coventry, CV4 7AL, UK
| | - Peter B O'Connor
- Department of Chemistry, University of Warwick, Coventry, CV4 7AL, UK
| | - Dietrich A Volmer
- Department of Chemistry, Humboldt University Berlin, 12489, Berlin, Germany.
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99
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Wang Z, Deuss PJ. The isolation of lignin with native-like structure. Biotechnol Adv 2023; 68:108230. [PMID: 37558187 DOI: 10.1016/j.biotechadv.2023.108230] [Citation(s) in RCA: 12] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/25/2023] [Revised: 08/03/2023] [Accepted: 08/04/2023] [Indexed: 08/11/2023]
Abstract
Searching for renewable alternatives for fossil carbon resources to produce chemicals, fuels and materials is essential for the development of a sustainable society. Lignin, a major component of lignocellulosic biomass, is an abundant renewable source of aromatics and is currently underutilized as it is often burned as an undesired side stream in the production of paper and bioethanol. This lignin harbors great potential as source of high value aromatic chemicals and materials. Biorefinery schemes focused on lignin are currently under development with aim of acquiring added value from lignin. However, the performance of these novel lignin-focused biorefineries is closely linked with the quality of extracted lignin in terms of the level of degradation and modification. Thus, the reactivity including the degradation pathways of the native lignin contained in the plant material needs to be understood in detail to potentially achieve higher value from lignin. Undegraded native-like lignin with an as close as possible structure to native lignin contained in the lignocellulosic plant material serves as a promising model lignin to support detailed studies on the structure and reactivity of native lignin, yielding key understanding for the development of lignin-focused biorefineries. The aim of this review is to highlight the different methods to attain "native-like" lignins that can be valuable for such studies. This is done by giving a basic introduction on what is known about the native lignin structure and the techniques and methods used to analyze it followed by an overview of the fractionation and isolation methods to isolate native-like lignin. Finally, a perspective on the isolation and use of native-like lignin is provided, showing the great potential that this type of lignin brings for understanding the effect of different biomass treatments on the native lignin structure.
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Affiliation(s)
- Zhiwen Wang
- Department of Chemical Engineering (ENTEG), University of Groningen, Nijenborgh 4, 9747, AG, Groningen, the Netherlands.
| | - Peter J Deuss
- Department of Chemical Engineering (ENTEG), University of Groningen, Nijenborgh 4, 9747, AG, Groningen, the Netherlands.
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100
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Li K, Zhong W, Li P, Ren J, Jiang K, Wu W. Recent advances in lignin antioxidant: Antioxidant mechanism, evaluation methods, influence factors and various applications. Int J Biol Macromol 2023; 251:125992. [PMID: 37544567 DOI: 10.1016/j.ijbiomac.2023.125992] [Citation(s) in RCA: 16] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/26/2023] [Revised: 07/07/2023] [Accepted: 07/21/2023] [Indexed: 08/08/2023]
Abstract
Lignin, a by-product of processing lignocellulosic materials, has a polyphenolic structure and can be used as an antioxidant directly or synergistically with synthetic types of antioxidants, leading to different applications. Its antioxidant mechanism is mainly related to the production of ROS, but the details need to be further investigated. The antioxidant property of lignin is mainly related to the content of phenolic hydroxyl group, but methoxy, purity will also have an effect on it. In addition, different methods to detect the antioxidant properties of lignin have different advantages and disadvantages. In this paper, the antioxidant mechanism of lignin, the methods to determine the antioxidant activity and the progress of its application in various fields are reviewed. In addition, the current research on the antioxidant properties of lignin and the hot directions are provided, and an outlook on the research into the antioxidant properties of lignin is provided to broaden its potential application areas.
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Affiliation(s)
- Kongyan Li
- Jiangsu Co-Innovation Center of Efficient Processing and Utilization of Forest Resources, Nanjing Forestry University, Nanjing 210037, China; College of Light Industry and Food Engineering, Nanjing Forestry University, Nanjing 210037, China
| | - Wei Zhong
- Jiangsu Co-Innovation Center of Efficient Processing and Utilization of Forest Resources, Nanjing Forestry University, Nanjing 210037, China; College of Light Industry and Food Engineering, Nanjing Forestry University, Nanjing 210037, China
| | - Penghui Li
- Jiangsu Co-Innovation Center of Efficient Processing and Utilization of Forest Resources, Nanjing Forestry University, Nanjing 210037, China; College of Light Industry and Food Engineering, Nanjing Forestry University, Nanjing 210037, China
| | - Jianpeng Ren
- Jiangsu Co-Innovation Center of Efficient Processing and Utilization of Forest Resources, Nanjing Forestry University, Nanjing 210037, China; College of Light Industry and Food Engineering, Nanjing Forestry University, Nanjing 210037, China
| | - Kangjie Jiang
- Jiangsu Co-Innovation Center of Efficient Processing and Utilization of Forest Resources, Nanjing Forestry University, Nanjing 210037, China; College of Light Industry and Food Engineering, Nanjing Forestry University, Nanjing 210037, China
| | - Wenjuan Wu
- Jiangsu Co-Innovation Center of Efficient Processing and Utilization of Forest Resources, Nanjing Forestry University, Nanjing 210037, China; College of Light Industry and Food Engineering, Nanjing Forestry University, Nanjing 210037, China.
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