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Roy SS, Rayner PJ, Burns MJ, Duckett SB. A simple and cost-efficient technique to generate hyperpolarized long-lived 15N- 15N nuclear spin order in a diazine by signal amplification by reversible exchange. J Chem Phys 2020; 152:014201. [PMID: 31914733 PMCID: PMC7351221 DOI: 10.1063/1.5132308] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022] Open
Abstract
Signal Amplification by Reversible Exchange (SABRE) is an inexpensive and simple hyperpolarization technique that is capable of boosting nuclear magnetic resonance sensitivity by several orders of magnitude. It utilizes the reversible binding of para-hydrogen, as hydride ligands, and a substrate of interest to a metal catalyst to allow for polarization transfer from para-hydrogen into substrate nuclear spins. While the resulting nuclear spin populations can be dramatically larger than those normally created, their lifetime sets a strict upper limit on the experimental timeframe. Consequently, short nuclear spin lifetimes are a challenge for hyperpolarized metabolic imaging. In this report, we demonstrate how both hyperpolarization and long nuclear spin lifetime can be simultaneously achieved in nitrogen-15 containing derivatives of pyridazine and phthalazine by SABRE. These substrates were chosen to reflect two distinct classes of 15N2-coupled species that differ according to their chemical symmetry and thereby achieve different nuclear spin lifetimes. The pyridazine derivative proves to exhibit a signal lifetime of ∼2.5 min and can be produced with a signal enhancement of ∼2700. In contrast, while the phthalazine derivative yields a superior 15 000-fold 15N signal enhancement at 11.7 T, it has a much shorter signal lifetime.
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Affiliation(s)
- Soumya S Roy
- Centre for Hyperpolarisation in Magnetic Resonance (CHyM), Department of Chemistry, University of York, Heslington, York YO10 5DD, United Kingdom
| | - Peter J Rayner
- Centre for Hyperpolarisation in Magnetic Resonance (CHyM), Department of Chemistry, University of York, Heslington, York YO10 5DD, United Kingdom
| | - Michael J Burns
- Centre for Hyperpolarisation in Magnetic Resonance (CHyM), Department of Chemistry, University of York, Heslington, York YO10 5DD, United Kingdom
| | - Simon B Duckett
- Centre for Hyperpolarisation in Magnetic Resonance (CHyM), Department of Chemistry, University of York, Heslington, York YO10 5DD, United Kingdom
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Pompe N, Chen J, Illarionov B, Panter S, Fischer M, Bacher A, Weber S. Methyl groups matter: Photo-CIDNP characterizations of the semiquinone radicals of FMN and demethylated FMN analogs. J Chem Phys 2019; 151:235103. [PMID: 31864274 DOI: 10.1063/1.5130557] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
In this contribution, the relative hyperfine couplings are determined for the 1H nuclei of the flavin mononucleotide (FMN) radical in an aqueous environment. In addition, three structural analogs with different methylation patterns are characterized and the influence of the substituents at the isoalloxazine moiety on the electronic structure of the radicals is explored. By exploiting nuclear hyperpolarization generated via the photo-CIDNP (chemically induced dynamic nuclear polarization) effect, it is possible to study the short-lived radical species generated by in situ light excitation. Experimental data are extracted by least-squares fitting and supported by quantum chemical calculations and published values from electron paramagnetic resonance and electron-nuclear double resonance. Furthermore, mechanistic details of the photoreaction of the investigated flavin analogs with l-tryptophan are derived from the photo-CIDNP spectra recorded at different pH values. Thereby, the neutral and anionic radicals of FMN and three structural analogs are, for the first time, characterized in terms of their electronic structure in an aqueous environment.
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Affiliation(s)
- Nils Pompe
- Institute of Physical Chemistry, University of Freiburg, 79104 Freiburg, Germany
| | - Jing Chen
- Institute of Physical Chemistry, University of Freiburg, 79104 Freiburg, Germany
| | - Boris Illarionov
- Hamburg School of Food Science, Institute of Food Chemistry, University of Hamburg, 20146 Hamburg, Germany
| | - Sabrina Panter
- Institute of Physical Chemistry, University of Freiburg, 79104 Freiburg, Germany
| | - Markus Fischer
- Hamburg School of Food Science, Institute of Food Chemistry, University of Hamburg, 20146 Hamburg, Germany
| | - Adelbert Bacher
- Department of Chemistry, Technical University of Munich, 85748 Garching, Germany
| | - Stefan Weber
- Institute of Physical Chemistry, University of Freiburg, 79104 Freiburg, Germany
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Yang H, Hofstetter H, Cavagnero S. Fast-pulsing LED-enhanced NMR: A convenient and inexpensive approach to increase NMR sensitivity. J Chem Phys 2019; 151:245102. [PMID: 31893873 DOI: 10.1063/1.5131452] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022] Open
Abstract
Low-concentration photochemically induced dynamic nuclear polarization (LC-photo-CIDNP) has recently emerged as a powerful technology for the detection of aromatic amino acids and proteins in solution in the low-micromolar to nanomolar concentration range. LC-photo-CIDNP is typically carried out in the presence of high-power lasers, which are costly and maintenance-heavy. Here, we show that LC-photo-CIDNP can be performed with light-emitting diodes (LEDs), which are inexpensive and much less cumbersome than lasers, laser diodes, flash lamps, or other light sources. When nuclear magnetic resonance (NMR) sample concentration is within the low-micromolar to nanomolar range, as in LC-photo-CIDNP, replacement of lasers with LEDs leads to no losses in sensitivity. We also investigate the effect of optical-fiber thickness and compare excitation rate constants of an Ar ion laser (488 nm) and a 466 nm LED, taking LED emission bandwidths into account. In addition, importantly, we develop a novel pulse sequence (13C RASPRINT) to perform ultrarapid LC-photo-CIDNP data collection. Remarkably, 13C RASPRINT leads to 4-fold savings in data collection time. The latter advance relies on the fact that photo-CID nuclear hyperpolarization does not suffer from the longitudinal-relaxation recovery requirements of conventional NMR. Finally, we combine both the above improvements, resulting in facile and rapid (≈16 s-2.5 min) collection of 1 and 2D NMR data on aromatic amino acids and proteins in solution at nanomolar to low micromolar concentration.
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Affiliation(s)
- Hanming Yang
- Department of Chemistry, University of Wisconsin-Madison, 1101 University Ave., Madison, Wisconsin 53706, USA
| | - Heike Hofstetter
- Department of Chemistry, University of Wisconsin-Madison, 1101 University Ave., Madison, Wisconsin 53706, USA
| | - Silvia Cavagnero
- Department of Chemistry, University of Wisconsin-Madison, 1101 University Ave., Madison, Wisconsin 53706, USA
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Blechta V, Sýkora J. STRONG INADEQUATE, an experiment for detection of small J(C,C) couplings in symmetrical molecules. MAGNETIC RESONANCE IN CHEMISTRY : MRC 2019; 57:1107-1120. [PMID: 31134675 DOI: 10.1002/mrc.4897] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/23/2019] [Revised: 05/10/2019] [Accepted: 05/20/2019] [Indexed: 06/09/2023]
Abstract
A new version of the two-dimensional INADEQUATE experiment was designed for detection of small couplings between equivalent carbon atoms separated in the molecule by several bonds, where other techniques fail due to rich line splitting and mutual peak cancellation in many molecules. As the proposed method is suitable for detection of couplings in strongly coupled systems in general, we propose the name STRONG INADEQUATE in the paper. Similar to other methods for detection of couplings between equivalent carbons, the STRONG INADEQUATE experiment utilizes one-bond carbon-proton coupling for creation of the effective chemical shift differences. The STRONG INADEQUATE experiment works superbly for n JCC , where n ≥ 3. Then the F1 pattern is reduced to a simple antiphase doublet with n JCC separation, and this pattern is also preserved when a symmetrical HC···C'H' system is coupled to other protons. Even in the measurement of 2 JCC couplings, the STRONG INADEQUATE experiment generates a much simpler pattern than the original pulse sequences for measurement of couplings between equivalent carbons.
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Affiliation(s)
- Vratislav Blechta
- Department of Analytical Chemistry, Institute of Chemical Process Fundamentals of the CAS, v. v. i., Prague 6, Czech Republic
| | - Jan Sýkora
- Department of Analytical Chemistry, Institute of Chemical Process Fundamentals of the CAS, v. v. i., Prague 6, Czech Republic
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55
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Hill-Casey F, Sakho A, Mohammed A, Rossetto M, Ahwal F, Duckett SB, John RO, Richardson PM, Virgo R, Halse ME. In Situ SABRE Hyperpolarization with Earth's Field NMR Detection. Molecules 2019; 24:molecules24224126. [PMID: 31739621 PMCID: PMC6891519 DOI: 10.3390/molecules24224126] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/30/2019] [Revised: 11/11/2019] [Accepted: 11/12/2019] [Indexed: 11/17/2022] Open
Abstract
Hyperpolarization methods, which increase the sensitivity of nuclear magnetic resonance (NMR) and magnetic resonance imaging (MRI), have the potential to expand the range of applications of these powerful analytical techniques and to enable the use of smaller and cheaper devices. The signal amplification by reversible exchange (SABRE) method is of particular interest because it is relatively low-cost, straight-forward to implement, produces high-levels of renewable signal enhancement, and can be interfaced with low-cost and portable NMR detectors. In this work, we demonstrate an in situ approach to SABRE hyperpolarization that can be achieved using a simple, commercially-available Earth’s field NMR detector to provide 1H polarization levels of up to 3.3%. This corresponds to a signal enhancement over the Earth’s magnetic field by a factor of ε > 2 × 108. The key benefit of our approach is that it can be used to directly probe the polarization transfer process at the heart of the SABRE technique. In particular, we demonstrate the use of in situ hyperpolarization to observe the activation of the SABRE catalyst, the build-up of signal in the polarization transfer field (PTF), the dependence of the hyperpolarization level on the strength of the PTF, and the rate of decay of the hyperpolarization in the ultra-low-field regime.
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Affiliation(s)
- Fraser Hill-Casey
- Department of Chemistry, University of York, Heslington, York YO10 5DD, UK; (F.H.-C.); (A.S.); (A.M.); (M.R.); (P.M.R.); (R.V.)
| | - Aminata Sakho
- Department of Chemistry, University of York, Heslington, York YO10 5DD, UK; (F.H.-C.); (A.S.); (A.M.); (M.R.); (P.M.R.); (R.V.)
- Centre for Hyperpolarisation in Magnetic Resonance, University of York, Heslington, York YO10 5NY, UK; (F.A.); (S.B.D.); (R.O.J.)
| | - Ahmed Mohammed
- Department of Chemistry, University of York, Heslington, York YO10 5DD, UK; (F.H.-C.); (A.S.); (A.M.); (M.R.); (P.M.R.); (R.V.)
- Centre for Hyperpolarisation in Magnetic Resonance, University of York, Heslington, York YO10 5NY, UK; (F.A.); (S.B.D.); (R.O.J.)
| | - Matheus Rossetto
- Department of Chemistry, University of York, Heslington, York YO10 5DD, UK; (F.H.-C.); (A.S.); (A.M.); (M.R.); (P.M.R.); (R.V.)
| | - Fadi Ahwal
- Centre for Hyperpolarisation in Magnetic Resonance, University of York, Heslington, York YO10 5NY, UK; (F.A.); (S.B.D.); (R.O.J.)
| | - Simon B. Duckett
- Centre for Hyperpolarisation in Magnetic Resonance, University of York, Heslington, York YO10 5NY, UK; (F.A.); (S.B.D.); (R.O.J.)
| | - Richard O. John
- Centre for Hyperpolarisation in Magnetic Resonance, University of York, Heslington, York YO10 5NY, UK; (F.A.); (S.B.D.); (R.O.J.)
| | - Peter M. Richardson
- Department of Chemistry, University of York, Heslington, York YO10 5DD, UK; (F.H.-C.); (A.S.); (A.M.); (M.R.); (P.M.R.); (R.V.)
- Centre for Hyperpolarisation in Magnetic Resonance, University of York, Heslington, York YO10 5NY, UK; (F.A.); (S.B.D.); (R.O.J.)
| | - Robin Virgo
- Department of Chemistry, University of York, Heslington, York YO10 5DD, UK; (F.H.-C.); (A.S.); (A.M.); (M.R.); (P.M.R.); (R.V.)
- Centre for Hyperpolarisation in Magnetic Resonance, University of York, Heslington, York YO10 5NY, UK; (F.A.); (S.B.D.); (R.O.J.)
| | - Meghan E. Halse
- Department of Chemistry, University of York, Heslington, York YO10 5DD, UK; (F.H.-C.); (A.S.); (A.M.); (M.R.); (P.M.R.); (R.V.)
- Correspondence: ; Tel.: +44-1904-322853
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Singh J, Suh EH, Sharma G, Khemtong C, Sherry AD, Kovacs Z. Probing carbohydrate metabolism using hyperpolarized 13 C-labeled molecules. NMR IN BIOMEDICINE 2019; 32:e4018. [PMID: 30474153 PMCID: PMC6579721 DOI: 10.1002/nbm.4018] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/20/2018] [Revised: 08/03/2018] [Accepted: 08/11/2018] [Indexed: 05/05/2023]
Abstract
Glycolysis is a fundamental metabolic process in all organisms. Anomalies in glucose metabolism are linked to various pathological conditions. In particular, elevated aerobic glycolysis is a characteristic feature of rapidly growing cells. Glycolysis and the closely related pentose phosphate pathway can be monitored in real time by hyperpolarized 13 C-labeled metabolic substrates such as 13 C-enriched, deuterated D-glucose derivatives, [2-13 C]-D-fructose, [2-13 C] dihydroxyacetone, [1-13 C]-D-glycerate, [1-13 C]-D-glucono-δ-lactone and [1-13 C] pyruvate in healthy and diseased tissues. Elevated glycolysis in tumors (the Warburg effect) was also successfully imaged using hyperpolarized [U-13 C6 , U-2 H7 ]-D-glucose, while the size of the preexisting lactate pool can be measured by 13 C MRS and/or MRI with hyperpolarized [1-13 C]pyruvate. This review summarizes the application of various hyperpolarized 13 C-labeled metabolites to the real-time monitoring of glycolysis and related metabolic processes in normal and diseased tissues.
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Affiliation(s)
- Jaspal Singh
- Advanced Imaging Research Center, The University of Texas Southwestern Medical Center, Dallas, TX, USA
| | - Eul Hyun Suh
- Advanced Imaging Research Center, The University of Texas Southwestern Medical Center, Dallas, TX, USA
| | - Gaurav Sharma
- Advanced Imaging Research Center, The University of Texas Southwestern Medical Center, Dallas, TX, USA
| | - Chalermchai Khemtong
- Advanced Imaging Research Center, The University of Texas Southwestern Medical Center, Dallas, TX, USA
| | - A. Dean Sherry
- Advanced Imaging Research Center, The University of Texas Southwestern Medical Center, Dallas, TX, USA
- Department of Chemistry and Biochemistry, The University of Texas at Dallas, Richardson, TX, USA
| | - Zoltan Kovacs
- Advanced Imaging Research Center, The University of Texas Southwestern Medical Center, Dallas, TX, USA
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57
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Kocman V, Di Mauro GM, Veglia G, Ramamoorthy A. Use of paramagnetic systems to speed-up NMR data acquisition and for structural and dynamic studies. SOLID STATE NUCLEAR MAGNETIC RESONANCE 2019; 102:36-46. [PMID: 31325686 PMCID: PMC6698407 DOI: 10.1016/j.ssnmr.2019.07.002] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/19/2019] [Revised: 07/10/2019] [Accepted: 07/11/2019] [Indexed: 05/05/2023]
Abstract
NMR spectroscopy is a powerful experimental technique to study biological systems at the atomic resolution. However, its intrinsic low sensitivity results in long acquisition times that in extreme cases lasts for days (or even weeks) often exceeding the lifetime of the sample under investigation. Different paramagnetic agents have been used in an effort to decrease the spin-lattice (T1) relaxation times of the studied nuclei, which are the main cause for long acquisition times necessary for signal averaging to enhance the signal-to-noise ratio of NMR spectra. Consequently, most of the experimental time is "wasted" in waiting for the magnetization to recover between successive scans. In this review, we discuss how to set up an optimal paramagnetic relaxation enhancement (PRE) system to effectively reduce the T1 relaxation times avoiding significant broadening of NMR signals. Additionally, we describe how PRE-agents can be used to provide structural and dynamic information and can even be used to follow the intermediates of chemical reactions and to speed-up data acquisition. We also describe the unique challenges and benefits associated with the application of PRE to solid-state NMR spectroscopy, explaining how the use of PREs is more complex for membrane mimetic systems as PREs can also be exploited to change the alignment of oriented membrane systems. Functionalization of membrane mimetics, such as bicelles, can provide a controlled region of paramagnetic effect that has the potential, together with the desired alignment, to provide crucial biologically relevant structural information. And finally, we discuss how paramagnetic metals can be utilized to further increase the dynamic nuclear polarization (DNP) effects and how to preserve the enhancements when dissolution DNP is implemented.
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Affiliation(s)
- Vojč Kocman
- Department of Chemistry, University of Michigan, Ann Arbor, MI, USA; Biophysics, Biomedical Engineering, Macromolecular Science and Engineering, University of Michigan, Ann Arbor, MI, USA
| | | | - Gianluigi Veglia
- Department of Biochemistry, Molecular Biology and Biophysics, University of Minnesota, Minneapolis, MN, USA
| | - Ayyalusamy Ramamoorthy
- Department of Chemistry, University of Michigan, Ann Arbor, MI, USA; Biophysics, Biomedical Engineering, Macromolecular Science and Engineering, University of Michigan, Ann Arbor, MI, USA.
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58
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Yang H, Cavagnero S. Improved sensitivity of laser-enhanced 1H α- 13C α-correlation via suppression of C α-C' scalar-coupling evolution. JOURNAL OF MAGNETIC RESONANCE (SAN DIEGO, CALIF. : 1997) 2019; 307:106572. [PMID: 31445479 PMCID: PMC7416423 DOI: 10.1016/j.jmr.2019.106572] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/11/2019] [Revised: 08/06/2019] [Accepted: 08/12/2019] [Indexed: 06/10/2023]
Abstract
Low-concentration photochemically induced dynamic polarization (LC-photo-CIDNP) enables the spectroscopic analysis of biomolecules containing the amino acids Trp and Tyr at sub-micromolar concentration in solution. Typical LC-photo-CIDNP pulse sequences involving 1H-13C correlation, however, perform well in the case of aromatic resonances but display a relatively poor signal-to-noise ratio for 13Cα and 13Cβ resonances. Here, we develop a novel pulse sequence denoted as 13C perturbation-recovered selective-pulse photo-CINDP enhanced reverse INEPT, or 13C PRESPRINT, tailored to the LC-photo-CIDNP analysis of 1H-13Cα pairs. Our method, which is based on full suppression of 1-bond Cα-C' scalar-coupling evolution during the constant-time delay, results into a sensitivity improvement by a factor of 2. The enhanced performance of this pulse sequence enabled us to improve the analysis of LC-photo-CIDNP laser-power dependence at very low (200 nM) sample concentration. An improved theoretical model, developed to quantitatively describe this laser-power dependence, shows excellent agreement with our 13C PRESPRINT experimental data.
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Affiliation(s)
- Hanming Yang
- Department of Chemistry, University of Wisconsin - Madison, 1101 University Ave., Madison, WI 53706, USA
| | - Silvia Cavagnero
- Department of Chemistry, University of Wisconsin - Madison, 1101 University Ave., Madison, WI 53706, USA.
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59
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Skovpin IV, Svyatova A, Chukanov N, Chekmenev EY, Kovtunov KV, Koptyug IV. 15 N Hyperpolarization of Dalfampridine at Natural Abundance for Magnetic Resonance Imaging. Chemistry 2019; 25:12694-12697. [PMID: 31338889 PMCID: PMC6790219 DOI: 10.1002/chem.201902724] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/13/2019] [Revised: 07/03/2019] [Indexed: 11/10/2022]
Abstract
Signal Amplification by Reversible Exchange (SABRE) is a promising method for NMR signal enhancement and production of hyperpolarized molecules. As nuclear spin relaxation times of heteronuclei are usually much longer than those of protons, SABRE-based hyperpolarization of heteronuclei in molecules is highly important in the context of biomedical applications. In this work, we demonstrate that the SLIC-SABRE technique can be successfully used to hyperpolarize 15 N nuclei in dalfampridine. The high polarization level of ca. 8 % achieved in this work made it possible to acquire 15 N MR images at natural abundance of the 15 N nuclei for the first time.
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Affiliation(s)
- Ivan V Skovpin
- International Tomography Center, SB RAS, 3A Institutskaya st., Novosibirsk, 630090, Russia
- Novosibirsk State University, 2 Pirogova st., Novosibirsk, 630090, Russia
| | - Alexandra Svyatova
- International Tomography Center, SB RAS, 3A Institutskaya st., Novosibirsk, 630090, Russia
- Novosibirsk State University, 2 Pirogova st., Novosibirsk, 630090, Russia
| | - Nikita Chukanov
- International Tomography Center, SB RAS, 3A Institutskaya st., Novosibirsk, 630090, Russia
- Novosibirsk State University, 2 Pirogova st., Novosibirsk, 630090, Russia
| | - Eduard Y Chekmenev
- Department of Chemistry, Karmanos Cancer Institute (KCI), Integrative Biosciences (Ibio), Wayne State University, Detroit, MI, USA
- Russian Academy of Sciences (RAS), 14 Leninskiy Prospekt, Moscow, 119991, Russia
| | - Kirill V Kovtunov
- International Tomography Center, SB RAS, 3A Institutskaya st., Novosibirsk, 630090, Russia
- Novosibirsk State University, 2 Pirogova st., Novosibirsk, 630090, Russia
| | - Igor V Koptyug
- International Tomography Center, SB RAS, 3A Institutskaya st., Novosibirsk, 630090, Russia
- Novosibirsk State University, 2 Pirogova st., Novosibirsk, 630090, Russia
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60
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Richardson PM, Iali W, Roy SS, Rayner PJ, Halse ME, Duckett SB. Rapid 13C NMR hyperpolarization delivered from para-hydrogen enables the low concentration detection and quantification of sugars. Chem Sci 2019; 10:10607-10619. [PMID: 32110347 PMCID: PMC7020793 DOI: 10.1039/c9sc03450a] [Citation(s) in RCA: 24] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/12/2019] [Accepted: 09/23/2019] [Indexed: 12/16/2022] Open
Abstract
The monosaccharides glucose and fructose are rapidly detected and quantified by 13C NMR in conjunction with the hyperpolarisation method signal amplification by reversible exchange-relay.
Monosaccharides, such as glucose and fructose, are important to life. In this work we highlight how the rapid delivery of improved 13C detectability for sugars by nuclear magnetic resonance (NMR) can be achieved using the para-hydrogen based NMR hyperpolarization method SABRE-Relay (Signal Amplification by Reversible Exchange-Relay). The significant 13C signal enhancements of 250 at a high field of 9.4 T, and 3100 at a low field of 1 T, enable the detection of trace amounts of these materials as well as the quantification of their tautomeric makeup. Using studies on 13C and 2H isotopically labelled agents we demonstrate how hyperpolarization lifetime (T1) values can be extended, and how singlet states with long lifetimes can be created. The precise quantification of d-glucose-13C6-d7 at the millimolar concentration level is shown to be possible within minutes in conjunction with a linear hyperpolarized response as a function of concentration. In addition to the measurements using labelled materials, low concentration detection is also illustrated for millimolar samples with natural abundance 13C where isomeric form quantification can be achieved with a single transient.
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Affiliation(s)
- Peter M Richardson
- The Centre for Hyperpolarisation in Magnetic Resonance , Department of Chemistry , University of York , UK .
| | - Wissam Iali
- The Centre for Hyperpolarisation in Magnetic Resonance , Department of Chemistry , University of York , UK .
| | - Soumya S Roy
- The Centre for Hyperpolarisation in Magnetic Resonance , Department of Chemistry , University of York , UK .
| | - Peter J Rayner
- The Centre for Hyperpolarisation in Magnetic Resonance , Department of Chemistry , University of York , UK .
| | - Meghan E Halse
- The Centre for Hyperpolarisation in Magnetic Resonance , Department of Chemistry , University of York , UK .
| | - Simon B Duckett
- The Centre for Hyperpolarisation in Magnetic Resonance , Department of Chemistry , University of York , UK .
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61
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Taraban MB, Deredge DJ, Smith ME, Briggs KT, Li Y, Jiang ZX, Wintrode PL, Yu YB. Monitoring dendrimer conformational transition using 19 F and 1 H 2 O NMR. MAGNETIC RESONANCE IN CHEMISTRY : MRC 2019; 57:861-872. [PMID: 30746779 DOI: 10.1002/mrc.4849] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/06/2018] [Revised: 01/25/2019] [Accepted: 02/05/2019] [Indexed: 06/09/2023]
Abstract
The conformational transition of a fluorinated amphiphilic dendrimer is monitored by the 1 H signal from water, alongside the 19 F signal from the dendrimer. High-field NMR data (chemical shift δ, self-diffusion coefficient D, longitudinal relaxation rate R1 , and transverse relaxation rate R2 ) for both dendrimer (19 F) and water (1 H) match each other in detecting the conformational transition. Among all parameters for both nuclei, the water proton transverse-relaxation rate R2 (1 H2 O) displays the highest relative scale of change upon conformational transition of the dendrimer. Hydrogen/deuterium-exchange mass spectrometry reveals that the compact form of the dendrimer has slower proton exchange with water than the extended form. This result suggests that the sensitivity of R2 (1 H2 O) toward dendrimer conformation originates, at least partially, from the difference in proton exchange efficiency between different dendrimer conformations. Finally, we also demonstrated that this conformational transition could be conveniently monitored using a low-field benchtop NMR spectrometer via R2 (1 H2 O). The 1 H2 O signal thus offers a simple way to monitor structural changes of macromolecules using benchtop time-domain NMR.
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Affiliation(s)
- Marc B Taraban
- Department of Pharmaceutical Sciences, University of Maryland, Baltimore, MD, 21201, USA
| | - Daniel J Deredge
- Department of Pharmaceutical Sciences, University of Maryland, Baltimore, MD, 21201, USA
| | - Margaret E Smith
- Department of Pharmaceutical Sciences, University of Maryland, Baltimore, MD, 21201, USA
| | - Katharine T Briggs
- Department of Pharmaceutical Sciences, University of Maryland, Baltimore, MD, 21201, USA
| | - Yu Li
- School of Pharmaceutical Sciences, Wuhan University, Wuhan, 430071, China
| | - Zhong-Xing Jiang
- School of Pharmaceutical Sciences, Wuhan University, Wuhan, 430071, China
| | - Patrick L Wintrode
- Department of Pharmaceutical Sciences, University of Maryland, Baltimore, MD, 21201, USA
| | - Yihua Bruce Yu
- Department of Pharmaceutical Sciences, University of Maryland, Baltimore, MD, 21201, USA
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62
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Juliusson HY, Segler ALJ, Sigurdsson ST. Benzoyl-Protected Hydroxylamines for Improved Chemical Synthesis of Oligonucleotides Containing Nitroxide Spin Labels. European J Org Chem 2019. [DOI: 10.1002/ejoc.201900553] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
Affiliation(s)
- Haraldur Y. Juliusson
- Department of Chemistry; Science Institute; University of Iceland; Dunhaga 3 107 Reykjavik Iceland
| | - Anna-Lena J. Segler
- Department of Chemistry; Science Institute; University of Iceland; Dunhaga 3 107 Reykjavik Iceland
| | - Snorri Th. Sigurdsson
- Department of Chemistry; Science Institute; University of Iceland; Dunhaga 3 107 Reykjavik Iceland
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Laser- and cryogenic probe-assisted NMR enables hypersensitive analysis of biomolecules at submicromolar concentration. Proc Natl Acad Sci U S A 2019; 116:11602-11611. [PMID: 31142651 DOI: 10.1073/pnas.1820573116] [Citation(s) in RCA: 16] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022] Open
Abstract
Solution-state NMR typically requires 100 μM to 1 mM samples. This limitation prevents applications to mass-limited and aggregation-prone target molecules. Photochemically induced dynamic nuclear polarization was adapted to data collection on low-concentration samples by radiofrequency gating, enabling rapid 1D NMR spectral acquisition on aromatic amino acids and proteins bearing aromatic residues at nanomolar concentration, i.e., a full order of magnitude below other hyperpolarization techniques in liquids. Both backbone H1-C13 and side-chain resonances were enhanced, enabling secondary and tertiary structure analysis of proteins with remarkable spectral editing, via the 13C PREPRINT pulse sequence. Laser-enhanced 2D NMR spectra of 5 μM proteins at 600 MHz display 30-fold better S/N than conventional 2D data collected at 900 MHz. Sensitivity enhancements achieved with this technology, denoted as low-concentration photo-CIDNP (LC-photo-CIDNP), depend only weakly on laser intensity, highlighting the opportunity of safer and more cost-effective hypersensitive NMR applications employing low-power laser sources.
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64
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Yang S, McCormick J, Mamone S, Bouchard L, Glöggler S. Nuclear Spin Singlet States in Photoactive Molecules: From Fluorescence/NMR Bimodality to a Bimolecular Switch for Spin Singlet States. Angew Chem Int Ed Engl 2019. [DOI: 10.1002/ange.201814198] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Affiliation(s)
- Shengjun Yang
- Research Group for NMR Signal Enhancement, Max Planck Institute for Biophysical Chemistry Am Fassberg 11 37077 Göttingen Germany
- Center for Biostructural Imaging of Neurodegeneration Von-Siebold-Str. 3A 37075 Göttingen Germany
| | - Jeffrey McCormick
- Department of Chemistry and Biochemistry University of California at Los Angeles Los Angeles CA 90095-1569 USA
| | - Salvatore Mamone
- Research Group for NMR Signal Enhancement, Max Planck Institute for Biophysical Chemistry Am Fassberg 11 37077 Göttingen Germany
- Center for Biostructural Imaging of Neurodegeneration Von-Siebold-Str. 3A 37075 Göttingen Germany
| | - Louis‐S. Bouchard
- Department of Chemistry and Biochemistry University of California at Los Angeles Los Angeles CA 90095-1569 USA
| | - Stefan Glöggler
- Research Group for NMR Signal Enhancement, Max Planck Institute for Biophysical Chemistry Am Fassberg 11 37077 Göttingen Germany
- Center for Biostructural Imaging of Neurodegeneration Von-Siebold-Str. 3A 37075 Göttingen Germany
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65
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Yang S, McCormick J, Mamone S, Bouchard L, Glöggler S. Nuclear Spin Singlet States in Photoactive Molecules: From Fluorescence/NMR Bimodality to a Bimolecular Switch for Spin Singlet States. Angew Chem Int Ed Engl 2019; 58:2879-2883. [DOI: 10.1002/anie.201814198] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/13/2018] [Revised: 12/27/2018] [Indexed: 11/07/2022]
Affiliation(s)
- Shengjun Yang
- Research Group for NMR Signal Enhancement, Max Planck Institute for Biophysical Chemistry Am Fassberg 11 37077 Göttingen Germany
- Center for Biostructural Imaging of Neurodegeneration Von-Siebold-Str. 3A 37075 Göttingen Germany
| | - Jeffrey McCormick
- Department of Chemistry and Biochemistry University of California at Los Angeles Los Angeles CA 90095-1569 USA
| | - Salvatore Mamone
- Research Group for NMR Signal Enhancement, Max Planck Institute for Biophysical Chemistry Am Fassberg 11 37077 Göttingen Germany
- Center for Biostructural Imaging of Neurodegeneration Von-Siebold-Str. 3A 37075 Göttingen Germany
| | - Louis‐S. Bouchard
- Department of Chemistry and Biochemistry University of California at Los Angeles Los Angeles CA 90095-1569 USA
| | - Stefan Glöggler
- Research Group for NMR Signal Enhancement, Max Planck Institute for Biophysical Chemistry Am Fassberg 11 37077 Göttingen Germany
- Center for Biostructural Imaging of Neurodegeneration Von-Siebold-Str. 3A 37075 Göttingen Germany
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66
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Grootveld M, Percival B, Gibson M, Osman Y, Edgar M, Molinari M, Mather ML, Casanova F, Wilson PB. Progress in low-field benchtop NMR spectroscopy in chemical and biochemical analysis. Anal Chim Acta 2019; 1067:11-30. [PMID: 31047142 DOI: 10.1016/j.aca.2019.02.026] [Citation(s) in RCA: 62] [Impact Index Per Article: 12.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/17/2019] [Revised: 02/18/2019] [Accepted: 02/19/2019] [Indexed: 02/07/2023]
Abstract
The employment of spectroscopically-resolved NMR techniques as analytical probes have previously been both prohibitively expensive and logistically challenging in view of the large sizes of high-field facilities. However, with recent advances in the miniaturisation of magnetic resonance technology, low-field, cryogen-free "benchtop" NMR instruments are seeing wider use. Indeed, these miniaturised spectrometers are utilised in areas ranging from food and agricultural analyses, through to human biofluid assays and disease monitoring. Therefore, it is both intrinsically timely and important to highlight current applications of this analytical strategy, and also provide an outlook for the future, where this approach may be applied to a wider range of analytical problems, both qualitatively and quantitatively.
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Affiliation(s)
- Martin Grootveld
- Chemistry for Health/Bioanalytical Sciences Research Group, Leicester School of Pharmacy, De Montfort University, Leicester, LE1 9BH, UK
| | - Benita Percival
- Chemistry for Health/Bioanalytical Sciences Research Group, Leicester School of Pharmacy, De Montfort University, Leicester, LE1 9BH, UK
| | - Miles Gibson
- Chemistry for Health/Bioanalytical Sciences Research Group, Leicester School of Pharmacy, De Montfort University, Leicester, LE1 9BH, UK
| | - Yasan Osman
- Chemistry for Health/Bioanalytical Sciences Research Group, Leicester School of Pharmacy, De Montfort University, Leicester, LE1 9BH, UK
| | - Mark Edgar
- Department of Chemistry, University of Loughborough, Epinal Way, Loughborough, LE11 3TU, UK
| | - Marco Molinari
- School of Applied Sciences, University of Huddersfield, Queensgate, Huddersfield, HD1 3DH, UK
| | - Melissa L Mather
- Department of Electronic and Electrical Engineering, University of Nottingham, University Park, Nottingham, NG7 2RD, UK
| | | | - Philippe B Wilson
- Chemistry for Health/Bioanalytical Sciences Research Group, Leicester School of Pharmacy, De Montfort University, Leicester, LE1 9BH, UK.
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67
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Gizatullin B, Mattea C, Stapf S. Overhauser DNP FFC study of block copolymer diluted solution. Magn Reson Imaging 2019; 56:96-102. [DOI: 10.1016/j.mri.2018.09.005] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/14/2018] [Revised: 09/08/2018] [Accepted: 09/08/2018] [Indexed: 11/26/2022]
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68
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Saul P, Mamone S, Glöggler S. Nuclear singlet multimers (NUSIMERs) with long-lived singlet states. Chem Sci 2019; 10:413-417. [PMID: 30746089 PMCID: PMC6334717 DOI: 10.1039/c8sc02831a] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/27/2018] [Accepted: 10/24/2018] [Indexed: 01/13/2023] Open
Abstract
Magnetic resonance (NMR) is a powerful tool in chemical analysis, structure determination and in medical diagnostics. Developing novel biological sensors for this field holds promise to better investigate protein structures or target diseases more efficiently. Herein, we explore nuclear spin singlet states in dendritic macromolecules as a platform molecule to develop stimuli responsive probes. We have developed a nuclear singlet multimer (NUSIMER) based on a generation 5 poly(amidoamine) dendrimer (PAMAM) which contains on average about 90 accessible nuclear spin singlet states with lifetimes up to 10-fold longer than the T 1 relaxation times (up to 10 seconds T s vs. T 1 < 0.5 seconds) in a single molecule. We demonstrate little influence on the singlet lifetime in phosphate buffer (H2O) and a high viscosity gel environment in the presence of paramagnetic oxygen. Additionally, we demonstrate an increase in singlet lifetime upon the release of a protective chemical moiety from the NUSIMER following a stimulus, whereby no change in longitudinal relaxation time is observed. The robustness and change in singlet lifetime of the NUSIMER holds promise for the development of a novel type of biosensors.
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Affiliation(s)
- Philip Saul
- NMR Signal Enhancement Group , Max-Planck-Institutefor Biophysical Chemistry , Am Faßberg 11 , 37077 Göttingen , Germany .
- Center for Biostructural Imaging of Neurodegeneration of UMG , Von-Siebold-Straße 3A , 37075 Göttingen , Germany
| | - Salvatore Mamone
- NMR Signal Enhancement Group , Max-Planck-Institutefor Biophysical Chemistry , Am Faßberg 11 , 37077 Göttingen , Germany .
- Center for Biostructural Imaging of Neurodegeneration of UMG , Von-Siebold-Straße 3A , 37075 Göttingen , Germany
| | - Stefan Glöggler
- NMR Signal Enhancement Group , Max-Planck-Institutefor Biophysical Chemistry , Am Faßberg 11 , 37077 Göttingen , Germany .
- Center for Biostructural Imaging of Neurodegeneration of UMG , Von-Siebold-Straße 3A , 37075 Göttingen , Germany
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69
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Enzymatic Bioremediation: Current Status, Challenges of Obtaining Process, and Applications. MICROORGANISMS FOR SUSTAINABILITY 2019. [DOI: 10.1007/978-981-13-7462-3_4] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
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70
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Foli G, Degli Esposti M, Toselli M, Morselli D, Fabbri P. Facile method based on 19F-NMR for the determination of hydroxyl value and molecular weight of hydroxyl terminated polymers. Analyst 2019; 144:2087-2096. [DOI: 10.1039/c8an02518e] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Two-steps method to determine hydroxyl value and molecular weight of hydroxyl terminated polymers by 19F-NMR measurements.
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Affiliation(s)
- Giacomo Foli
- Department of Civil
- Chemical
- Environmental and Materials Engineering (DICAM)
- Università di Bologna
- 40131 Bologna
| | - Micaela Degli Esposti
- Department of Civil
- Chemical
- Environmental and Materials Engineering (DICAM)
- Università di Bologna
- 40131 Bologna
| | - Maurizio Toselli
- Department of Industrial Chemistry “Toso Montanari”
- Università di Bologna
- 40136 Bologna
- Italy
| | - Davide Morselli
- Department of Civil
- Chemical
- Environmental and Materials Engineering (DICAM)
- Università di Bologna
- 40131 Bologna
| | - Paola Fabbri
- Department of Civil
- Chemical
- Environmental and Materials Engineering (DICAM)
- Università di Bologna
- 40131 Bologna
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71
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Leroy C, Bryce DL. Recent advances in solid-state nuclear magnetic resonance spectroscopy of exotic nuclei. PROGRESS IN NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY 2018; 109:160-199. [PMID: 30527135 DOI: 10.1016/j.pnmrs.2018.08.002] [Citation(s) in RCA: 22] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/12/2018] [Revised: 07/18/2018] [Accepted: 08/10/2018] [Indexed: 06/09/2023]
Abstract
We present a review of recent advances in solid-state nuclear magnetic resonance (SSNMR) studies of exotic nuclei. Exotic nuclei may be spin-1/2 or quadrupolar, and typically have low gyromagnetic ratios, low natural abundances, large quadrupole moments (when I > 1/2), or some combination of these properties, generally resulting in low receptivities and/or prohibitively broad line widths. Some nuclides are little studied for other reasons, also rendering them somewhat exotic. We first discuss some of the recent progress in pulse sequences and hardware development which continues to enable researchers to study new kinds of materials as well as previously unfeasible nuclei. This is followed by a survey of applications to a wide range of exotic nuclei (including e.g., 9Be, 25Mg, 33S, 39K, 43Ca, 47/49Ti, 53Cr, 59Co, 61Ni, 67Zn, 73Ge, 75As, 87Sr, 115In, 119Sn, 121/123Sb, 135/137Ba, 185/187Re, 209Bi), most of them quadrupolar. The scope of the review is the past ten years, i.e., 2007-2017.
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Affiliation(s)
- César Leroy
- Department of Chemistry and Biomolecular Sciences & Centre for Catalysis Research and Innovation, University of Ottawa, 10 Marie Curie Private, Ottawa, Ontario K1N 6N5, Canada
| | - David L Bryce
- Department of Chemistry and Biomolecular Sciences & Centre for Catalysis Research and Innovation, University of Ottawa, 10 Marie Curie Private, Ottawa, Ontario K1N 6N5, Canada.
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72
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Richardson PM, John RO, Parrott AJ, Rayner PJ, Iali W, Nordon A, Halse ME, Duckett SB. Quantification of hyperpolarisation efficiency in SABRE and SABRE-Relay enhanced NMR spectroscopy. Phys Chem Chem Phys 2018; 20:26362-26371. [PMID: 30303501 PMCID: PMC6202922 DOI: 10.1039/c8cp05473h] [Citation(s) in RCA: 25] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/28/2018] [Accepted: 09/25/2018] [Indexed: 11/21/2022]
Abstract
para-Hydrogen (p-H2) induced polarisation (PHIP) is an increasingly popular method for sensitivity enhancement in NMR spectroscopy. Its growing popularity is due in part to the introduction of the signal amplification by reversible exchange (SABRE) method that generates renewable hyperpolarisation in target analytes in seconds. A key benefit of PHIP and SABRE is that p-H2 can be relatively easily and cheaply produced, with costs increasing with the desired level of p-H2 purity. In this work, the efficiency of the SABRE polarisation transfer is explored by measuring the level of analyte hyperpolarisation as a function of the level of p-H2 enrichment. A linear relationship was found between p-H2 enrichment and analyte 1H hyperpolarisation for a range of molecules, polarisation transfer catalysts, NMR detection fields and for both the SABRE and SABRE-Relay transfer mechanisms over the range 29-99% p-H2 purity. The gradient of these linear relationships were related to a simple theoretical model to define an overall efficiency parameter, E, that quantifies the net fraction of the available p-H2 polarisation that is transferred to the target analyte. We find that the efficiency of SABRE is independent of the NMR detection field and exceeds E = 20% for methyl-4,6-d2-nicotinate when using a previously optimised catalyst system. For the SABRE-Relay transfer mechanism, efficiencies of up to E = 1% were found for 1H polarisation of 1-propanol, when ammonia was used as the polarisation carrier.
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Affiliation(s)
- Peter M Richardson
- Centre for Hyperpolarisation in Magnetic Resonance, Department of Chemistry, University of York, UK.
| | - Richard O John
- Centre for Hyperpolarisation in Magnetic Resonance, Department of Chemistry, University of York, UK.
| | - Andrew J Parrott
- WestCHEM, Department of Pure and Applied Chemistry and CPACT, University of Strathclyde, Glasgow, UK
| | - Peter J Rayner
- Centre for Hyperpolarisation in Magnetic Resonance, Department of Chemistry, University of York, UK.
| | - Wissam Iali
- Centre for Hyperpolarisation in Magnetic Resonance, Department of Chemistry, University of York, UK.
| | - Alison Nordon
- WestCHEM, Department of Pure and Applied Chemistry and CPACT, University of Strathclyde, Glasgow, UK
| | - Meghan E Halse
- Centre for Hyperpolarisation in Magnetic Resonance, Department of Chemistry, University of York, UK.
| | - Simon B Duckett
- Centre for Hyperpolarisation in Magnetic Resonance, Department of Chemistry, University of York, UK.
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73
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Puig-Castellví F, Pérez Y, Piña B, Tauler R, Alfonso I. Comparative analysis of 1H NMR and 1H- 13C HSQC NMR metabolomics to understand the effects of medium composition in yeast growth. Anal Chem 2018; 90:12422-12430. [PMID: 30350620 DOI: 10.1021/acs.analchem.8b01196] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
Abstract
In nuclear magnetic resonance (NMR) metabolomics, most of the studies have been focused on the analysis of one-dimensional proton (1D 1H) NMR, whereas the analysis of other nuclei, such as 13C, or other NMR experiments are still underrepresented. The preference of 1D 1H NMR metabolomics lies on the fact that it has good sensitivity and a short acquisition time, but it lacks spectral resolution because it presents a high degree of overlap. In this study, the growth metabolism of yeast ( Saccharomyces cerevisiae) was analyzed by 1D 1H NMR and by two-dimensional (2D) 1H-13C heteronuclear single quantum coherence (HSQC) NMR spectroscopy, leading to the detection of more than 50 metabolites with both analytical approaches. These two analyses allow for a better understanding of the strengths and intrinsic limitations of the two types of NMR approaches. The two data sets (1D and 2D NMR) were investigated with PCA, ASCA, and PLS DA chemometric methods, and similar results were obtained regardless of the data type used. However, data-analysis time for the 2D NMR data set was substantially reduced when compared with the data analysis of the corresponding 1H NMR data set because, for the 2D NMR data, signal overlap was not a major problem and deconvolution was not required. The comparative study described in this work can be useful for the future design of metabolomics workflows, to assist in the selection of the most convenient NMR platform and to guide the posterior data analysis of biomarker selection.
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Affiliation(s)
- Francesc Puig-Castellví
- Department of Environmental Chemistry , Institute of Environmental Assessment and Water Research (IDAEA-CSIC) , Jordi Girona 18-26 , 08034 Barcelona , Spain
| | - Yolanda Pérez
- NMR Facility , Institute of Advanced Chemistry of Catalonia (IQAC-CSIC) , Jordi Girona 18-26 , 08034 Barcelona , Spain
| | - Benjamín Piña
- Department of Environmental Chemistry , Institute of Environmental Assessment and Water Research (IDAEA-CSIC) , Jordi Girona 18-26 , 08034 Barcelona , Spain
| | - Romà Tauler
- Department of Environmental Chemistry , Institute of Environmental Assessment and Water Research (IDAEA-CSIC) , Jordi Girona 18-26 , 08034 Barcelona , Spain
| | - Ignacio Alfonso
- Department of Biological Chemistry , Institute of Advanced Chemistry of Catalonia (IQAC-CSIC) , Jordi Girona 18-26 , 08034 Barcelona , Spain
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74
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Chen PC, Hennig J. The role of small-angle scattering in structure-based screening applications. Biophys Rev 2018; 10:1295-1310. [PMID: 30306530 PMCID: PMC6233350 DOI: 10.1007/s12551-018-0464-x] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/25/2018] [Accepted: 09/04/2018] [Indexed: 12/16/2022] Open
Abstract
In many biomolecular interactions, changes in the assembly states and structural conformations of participants can act as a complementary reporter of binding to functional and thermodynamic assays. This structural information is captured by a number of structural biology and biophysical techniques that are viable either as primary screens in small-scale applications or as secondary screens to complement higher throughput methods. In particular, small-angle X-ray scattering (SAXS) reports the average distance distribution between all atoms after orientational averaging. Such information is important when for example investigating conformational changes involved in inhibitory and regulatory mechanisms where binding events do not necessarily cause functional changes. Thus, we summarise here the current and prospective capabilities of SAXS-based screening in the context of other methods that yield structural information. Broad guidelines are also provided to assist readers in preparing screening protocols that are tailored to available X-ray sources.
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Affiliation(s)
- Po-Chia Chen
- Structural and Computational Biology Unit, European Molecular Biology Laboratory Heidelberg, Meyerhofstrasse 1, 69126, Heidelberg, Germany.
| | - Janosch Hennig
- Structural and Computational Biology Unit, European Molecular Biology Laboratory Heidelberg, Meyerhofstrasse 1, 69126, Heidelberg, Germany.
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75
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Masuda R, Gupta A, Stait-Gardner T, Zheng G, Torres A, Price WS. Shortening NMR experimental times. MAGNETIC RESONANCE IN CHEMISTRY : MRC 2018; 56:847-851. [PMID: 29777626 DOI: 10.1002/mrc.4749] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/13/2018] [Revised: 05/03/2018] [Accepted: 05/04/2018] [Indexed: 06/08/2023]
Abstract
Conventionally, arrayed nuclear magnetic resonance experiments, such as diffusion and relaxation, are performed with the same number of scans (NS) at each iteration despite the signal-to-noise ratio being more than sufficient for many of the iterations. Here, we propose a simple yet effective approach that significantly shortens experimental times by varying NS through the arrayed experiments while keeping the signal-to-noise ratio essentially the same and retaining experimental accuracy.
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Affiliation(s)
- Reika Masuda
- Nanoscale Organisation and Dynamics Group, Western Sydney University, Penrith, NSW, 2751, Australia
| | - Abhishek Gupta
- Nanoscale Organisation and Dynamics Group, Western Sydney University, Penrith, NSW, 2751, Australia
| | - Tim Stait-Gardner
- Nanoscale Organisation and Dynamics Group, Western Sydney University, Penrith, NSW, 2751, Australia
| | - Gang Zheng
- Nanoscale Organisation and Dynamics Group, Western Sydney University, Penrith, NSW, 2751, Australia
| | - Allan Torres
- Nanoscale Organisation and Dynamics Group, Western Sydney University, Penrith, NSW, 2751, Australia
| | - William S Price
- Nanoscale Organisation and Dynamics Group, Western Sydney University, Penrith, NSW, 2751, Australia
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76
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Affiliation(s)
- Zhenchuang Xu
- Key Laboratory of Organofluorine Chemistry, Center for Excellence in Molecular Synthesis, Shanghai Institute of Organic Chemistry, University of Chinese Academy of Sciences, Chinese Academy of Sciences, 345 Ling-Ling Road, Shanghai 200032, China
| | - Chao Liu
- Key Laboratory of Organofluorine Chemistry, Center for Excellence in Molecular Synthesis, Shanghai Institute of Organic Chemistry, University of Chinese Academy of Sciences, Chinese Academy of Sciences, 345 Ling-Ling Road, Shanghai 200032, China
| | - Shujuan Zhao
- Key Laboratory of Organofluorine Chemistry, Center for Excellence in Molecular Synthesis, Shanghai Institute of Organic Chemistry, University of Chinese Academy of Sciences, Chinese Academy of Sciences, 345 Ling-Ling Road, Shanghai 200032, China
| | - Si Chen
- Key Laboratory of Organofluorine Chemistry, Center for Excellence in Molecular Synthesis, Shanghai Institute of Organic Chemistry, University of Chinese Academy of Sciences, Chinese Academy of Sciences, 345 Ling-Ling Road, Shanghai 200032, China
| | - Yanchuan Zhao
- Key Laboratory of Organofluorine Chemistry, Center for Excellence in Molecular Synthesis, Shanghai Institute of Organic Chemistry, University of Chinese Academy of Sciences, Chinese Academy of Sciences, 345 Ling-Ling Road, Shanghai 200032, China
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77
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Stadlmair LF, Letzel T, Drewes JE, Grassmann J. Enzymes in removal of pharmaceuticals from wastewater: A critical review of challenges, applications and screening methods for their selection. CHEMOSPHERE 2018; 205:649-661. [PMID: 29723723 DOI: 10.1016/j.chemosphere.2018.04.142] [Citation(s) in RCA: 39] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/12/2018] [Revised: 04/16/2018] [Accepted: 04/21/2018] [Indexed: 06/08/2023]
Abstract
At present, the removal of trace organic chemicals such as pharmaceuticals in wastewater treatment plants is often incomplete resulting in a continuous discharge into the aqueous environment. To overcome this issue, bioremediation approaches gained significant importance in recent times, since they might have a lower carbon footprint than chemical or physical treatment methods. In this context, enzyme-based technologies represent a promising alternative since they are able to specifically target certain chemicals. For this purpose, versatile monitoring of enzymatic reactions is of great importance in order to understand underlying transformation mechanisms and estimate the suitability of various enzymes exhibiting different specificities for bioremediation purposes. This study provides a comprehensive review, summarizing research on enzymatic transformation of pharmaceuticals in water treatment applications using traditional and state-of-the-art enzyme screening approaches with a special focus on mass spectrometry (MS)-based and high-throughput tools. MS-based enzyme screening represents an approach that allows a comprehensive mechanistic understanding of enzymatic reactions and, in particular, the identification of transformation products. A critical discussion of these approaches for implementation in wastewater treatment processes is also presented. So far, there are still major gaps between laboratory- and field-scale research that need to be overcome in order to assess the viability for real applications.
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Affiliation(s)
- Lara F Stadlmair
- Chair of Urban Water Systems Engineering, Technical University of Munich, Am Coulombwall 3, D-85748, Garching, Germany
| | - Thomas Letzel
- Chair of Urban Water Systems Engineering, Technical University of Munich, Am Coulombwall 3, D-85748, Garching, Germany
| | - Jörg E Drewes
- Chair of Urban Water Systems Engineering, Technical University of Munich, Am Coulombwall 3, D-85748, Garching, Germany
| | - Johanna Grassmann
- Chair of Urban Water Systems Engineering, Technical University of Munich, Am Coulombwall 3, D-85748, Garching, Germany.
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78
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Kidd BE, Gesiorski JL, Gemeinhardt ME, Shchepin RV, Kovtunov KV, Koptyug IV, Chekmenev EY, Goodson BM. Facile Removal of Homogeneous SABRE Catalysts for Purifying Hyperpolarized Metronidazole, a Potential Hypoxia Sensor. THE JOURNAL OF PHYSICAL CHEMISTRY. C, NANOMATERIALS AND INTERFACES 2018; 122:16848-16852. [PMID: 30559921 PMCID: PMC6294139 DOI: 10.1021/acs.jpcc.8b05758] [Citation(s) in RCA: 65] [Impact Index Per Article: 10.8] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/08/2023]
Abstract
We report a simple and effective method to remove IrIMes homogeneous polarization transfer catalysts from solutions where NMR Signal Amplification By Reversible Exchange (SABRE) has been performed, while leaving intact the substrate's hyperpolarized state. Following microTesla SABRE hyperpolarization of 15N spins in metronidazole, addition of SiO2 microparticles functionalized with 3-mercaptopropyl or 2-mercaptoethyl ethyl sulfide moieties provides removal of the catalyst from solution well within the hyperpolarization decay time at 0.3 T (T 1>3 mins)-and enabling transfer to 9.4 T for detection of enhanced 15N signals in the absence of catalyst within the NMR-detection region. Successful catalyst removal from solution is supported by the inability to "re-hyperpolarize" 15N spins in subsequent attempts, as well as by 1H NMR and ICP-MS. Record-high 15N nuclear polarization of up to ~34% was achieved, corresponding to >100,000-fold enhancement at 9.4 T, and approximately 5/6th of the 15N hyperpolarization is retained after ~20-second-long purification procedure. Taken together, these results help pave the way for future studies involving in vivo molecular imaging using agents hyperpolarized via rapid and inexpensive parahydrogen-based methods.
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Affiliation(s)
- Bryce E. Kidd
- Department of Chemistry and Biochemistry, Southern Illinois University, Carbondale, Illinois 62901 United States
| | - Jonathan L. Gesiorski
- Department of Chemistry and Biochemistry, Southern Illinois University, Carbondale, Illinois 62901 United States
| | - Max E. Gemeinhardt
- Department of Chemistry and Biochemistry, Southern Illinois University, Carbondale, Illinois 62901 United States
| | - Roman V. Shchepin
- Vanderbilt University Institute of Imaging Science (VUIIS), Department of Radiology and Radiological Sciences, Vanderbilt University Medical Center, Nashville, Tennessee 37232-2310 United States
| | - Kirill V. Kovtunov
- International Tomography Center SB RAS, Novosibirsk 630090, Russia
- Novosibirsk State University, Novosibirsk 630090, Russia
| | - Igor V. Koptyug
- International Tomography Center SB RAS, Novosibirsk 630090, Russia
- Novosibirsk State University, Novosibirsk 630090, Russia
| | - Eduard Y. Chekmenev
- Vanderbilt University Institute of Imaging Science (VUIIS), Department of Radiology and Radiological Sciences, Vanderbilt University Medical Center, Nashville, Tennessee 37232-2310 United States
- Integrative Biosciences (Ibio), Department of Chemistry, Wayne State University, Karmanos Cancer Institute (KCI), Detroit, Michigan 48202 United States
- Russian Academy of Sciences, Moscow, Leninskiy Prospekt 14, 119991, Russia
- Corresponding Authors: ,
| | - Boyd M. Goodson
- Department of Chemistry and Biochemistry, Southern Illinois University, Carbondale, Illinois 62901 United States
- Materials Technology Center, Southern Illinois University, Carbondale, Illinois 62901 United States
- Corresponding Authors: ,
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79
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Richardson PM, Parrott AJ, Semenova O, Nordon A, Duckett SB, Halse ME. SABRE hyperpolarization enables high-sensitivity 1H and 13C benchtop NMR spectroscopy. Analyst 2018; 143:3442-3450. [PMID: 29917031 PMCID: PMC6040279 DOI: 10.1039/c8an00596f] [Citation(s) in RCA: 37] [Impact Index Per Article: 6.2] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/29/2018] [Accepted: 06/01/2018] [Indexed: 12/13/2022]
Abstract
Benchtop NMR spectrometers operating with low magnetic fields of 1-2 T at sub-ppm resolution show great promise as analytical platforms that can be used outside the traditional laboratory environment for industrial process monitoring. One current limitation that reduces the uptake of benchtop NMR is associated with the detection fields' reduced sensitivity. Here we demonstrate how para-hydrogen (p-H2) based signal amplification by reversible exchange (SABRE), a simple to achieve hyperpolarization technique, enhances agent detectability within the environment of a benchtop (1 T) NMR spectrometer so that informative 1H and 13C NMR spectra can be readily recorded for low-concentration analytes. SABRE-derived 1H NMR signal enhancements of up to 17 000-fold, corresponding to 1H polarization levels of P = 5.9%, were achieved for 26 mM pyridine in d4-methanol in a matter of seconds. Comparable enhancement levels can be achieved in both deuterated and protio solvents but now the SABRE-enhanced analyte signals dominate due to the comparatively weak thermally-polarized solvent response. The SABRE approach also enables the acquisition of 13C NMR spectra of analytes at natural isotopic abundance in a single scan as evidenced by hyperpolarized 13C NMR spectra of tens of millimolar concentrations of 4-methylpyridine. Now the associated signal enhancement factors are up to 45 500 fold (P = 4.0%) and achieved in just 15 s. Integration of an automated SABRE polarization system with the benchtop NMR spectrometer framework produces renewable and reproducible NMR signal enhancements that can be exploited for the collection of multi-dimensional NMR spectra, exemplified here by a SABRE-enhanced 2D COSY NMR spectrum.
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Affiliation(s)
- Peter M. Richardson
- Centre for Hyperpolarisation in Magnetic Resonance
, Department of Chemistry
, University of York
,
UK
.
;
| | - Andrew J. Parrott
- WestCHEM
, Department of Pure and Applied Chemistry and CPACT
, University of Strathclyde
,
Glasgow
, UK
| | - Olga Semenova
- Centre for Hyperpolarisation in Magnetic Resonance
, Department of Chemistry
, University of York
,
UK
.
;
| | - Alison Nordon
- WestCHEM
, Department of Pure and Applied Chemistry and CPACT
, University of Strathclyde
,
Glasgow
, UK
| | - Simon B. Duckett
- Centre for Hyperpolarisation in Magnetic Resonance
, Department of Chemistry
, University of York
,
UK
.
;
| | - Meghan E. Halse
- Centre for Hyperpolarisation in Magnetic Resonance
, Department of Chemistry
, University of York
,
UK
.
;
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80
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Caracciolo F, Paioni AL, Filibian M, Melone L, Carretta P. Proton and Carbon-13 Dynamic Nuclear Polarization of Methylated β-Cyclodextrins. J Phys Chem B 2018; 122:1836-1845. [PMID: 29350528 DOI: 10.1021/acs.jpcb.7b11950] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/26/2022]
Abstract
1H and 13C dynamic nuclear polarizations have been studied in 13C-enriched β-cyclodextrins doped with (2,2,6,6-tetramethylpiperidin-1-yl)oxyl free radical. 1H and 13C polarizations raised above 7.5 and 7%, respectively, and for both nuclear species, the transfer of polarization from the electron spins appears to be consistent with a thermal mixing scenario for a concentration of 9 13C nuclei per molecule. When the concentration is increased to 21 13C nuclei per molecule, a decrease in the spin-lattice relaxation and polarization buildup rates is observed. This reduction is associated with the bottleneck effect induced by the decrease in the number of electron spins per nucleus when both the nuclear spin-lattice relaxation and the polarization occur through the electron non-Zeeman reservoir. 13C nuclear spin-lattice relaxation has been studied in the 1.8-340 K range, and the effects of internal molecular motions and of the free radicals on the relaxation are discussed. 13C hyperpolarization performances and room-temperature spin-lattice relaxation times show that these are promising materials for future biomedical applications.
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Affiliation(s)
| | - Alessandra Lucini Paioni
- Department of Physics, University of Pavia , 27100 Pavia, Italy.,NMR Spectroscopy, Bijvoet Center for Biomolecular Research, Utrecht University , Padualaan 8, 3584 CH Utrecht, The Netherlands
| | - Marta Filibian
- Department of Physics, University of Pavia , 27100 Pavia, Italy
| | - Lucio Melone
- Department of Chemistry, Materials, and Chemical Engineering G. Natta, Politecnico di Milano , 20133 Milano, Italy
| | - Pietro Carretta
- Department of Physics, University of Pavia , 27100 Pavia, Italy
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81
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Imakura Y, Nonaka H, Takakusagi Y, Ichikawa K, Maptue NR, Funk AM, Khemtong C, Sando S. Rational Design of [ 13 C,D 14 ]Tert-butylbenzene as a Scaffold Structure for Designing Long-lived Hyperpolarized 13 C Probes. Chem Asian J 2018; 13:280-283. [PMID: 29291256 PMCID: PMC6820848 DOI: 10.1002/asia.201701652] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/27/2017] [Indexed: 12/24/2022]
Abstract
Dynamic nuclear polarization (DNP) is a technique to polarize the nuclear spin population. As a result of the hyperpolarization, the NMR sensitivity of the nuclei in molecules can be dramatically enhanced. Recent application of the hyperpolarization technique has led to advances in biochemical and molecular studies. A major problem is the short lifetime of the polarized nuclear spin state. Generally, in solution, the polarized nuclear spin state decays to a thermal spin equilibrium, resulting in loss of the enhanced NMR signal. This decay is correlated directly with the spin-lattice relaxation time T1 . Here we report [13 C,D14 ]tert-butylbenzene as a new scaffold structure for designing hyperpolarized 13 C probes. Thanks to the minimized spin-lattice relaxation (T1 ) pathways, its water-soluble derivative showed a remarkably long 13 C T1 value and long retention of the hyperpolarized spin state.
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Affiliation(s)
- Yuki Imakura
- Department of Chemistry and Biotechnology, Graduate School of Engineering, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo, 113-8656, Japan
| | - Hiroshi Nonaka
- Department of Chemistry and Biotechnology, Graduate School of Engineering, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo, 113-8656, Japan
| | - Yoichi Takakusagi
- Incubation Center for Advanced Medical Science, Kyushu University, 3-1-1 Maidashi, Higashi-ku, Fukuoka, 812-8582, Japan
| | - Kazuhiro Ichikawa
- Incubation Center for Advanced Medical Science, Kyushu University, 3-1-1 Maidashi, Higashi-ku, Fukuoka, 812-8582, Japan
- Innovation Center for Medical Redox Navigation, Kyushu University, 3-1-1 Maidashi, Higashi-ku, Fukuoka, 812-8582, Japan
| | - Nesmine R Maptue
- Advanced Imaging Research Center, University of Texas Southwestern Medical Center, 5323 Harry Hines Boulevard, Dallas, Texas, 75390, USA
| | - Alexander M Funk
- Advanced Imaging Research Center, University of Texas Southwestern Medical Center, 5323 Harry Hines Boulevard, Dallas, Texas, 75390, USA
| | - Chalermchai Khemtong
- Advanced Imaging Research Center, University of Texas Southwestern Medical Center, 5323 Harry Hines Boulevard, Dallas, Texas, 75390, USA
- Department of Radiology, University of Texas Southwestern Medical Center, 5323 Harry Hines Boulevard, Dallas, Texas, 75390, USA
| | - Shinsuke Sando
- Department of Chemistry and Biotechnology, Graduate School of Engineering, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo, 113-8656, Japan
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82
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Stadler E, Dommaschk M, Frühwirt P, Herges R, Gescheidt G. Speeding up NMR by in Situ Photo-Induced Reversible Acceleration of T
1
-Relaxation (PIRAT). Chemphyschem 2018; 19:571-574. [DOI: 10.1002/cphc.201701304] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/04/2017] [Indexed: 11/08/2022]
Affiliation(s)
- Eduard Stadler
- Institut für Physikalische und Theoretische Chemie; Technische Universität Graz; Stremayrgasse 9 8010 Graz Austria
| | - Marcel Dommaschk
- Institut für Organische Chemie; Otto-Hahn-Platz 4 24098 Kiel Germany
| | - Philipp Frühwirt
- Institut für Physikalische und Theoretische Chemie; Technische Universität Graz; Stremayrgasse 9 8010 Graz Austria
| | - Rainer Herges
- Institut für Organische Chemie; Otto-Hahn-Platz 4 24098 Kiel Germany
| | - Georg Gescheidt
- Institut für Physikalische und Theoretische Chemie; Technische Universität Graz; Stremayrgasse 9 8010 Graz Austria
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83
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Okuno Y, Cavagnero S. Effect of heavy atoms on photochemically induced dynamic nuclear polarization in liquids. JOURNAL OF MAGNETIC RESONANCE (SAN DIEGO, CALIF. : 1997) 2018; 286:172-187. [PMID: 29274568 PMCID: PMC5767533 DOI: 10.1016/j.jmr.2017.12.001] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/22/2017] [Revised: 11/18/2017] [Accepted: 12/02/2017] [Indexed: 06/07/2023]
Abstract
Given its short hyperpolarization time (∼10-6 s) and mostly non-perturbative nature, photo-chemically induced dynamic nuclear polarization (photo-CIDNP) is a powerful tool for sensitivity enhancement in nuclear magnetic resonance. In this study, we explore the extent of 1H-detected 13C nuclear hyperpolarization that can be gained via photo-CIDNP in the presence of small-molecule additives containing a heavy atom. The underlying rationale for this methodology is the well-known external-heavy-atom (EHA) effect, which leads to significant enhancements in the intersystem-crossing rate of selected photosensitizer dyes from photoexcited singlet to triplet. We exploited the EHA effect upon addition of moderate amounts of halogen-atom-containing cosolutes. The resulting increase in the transient triplet-state population of the photo-CIDNP sensitizer fluorescein resulted in a significant increase in the nuclear hyperpolarization achievable via photo-CIDNP in liquids. We also explored the internal-heavy-atom (IHA) effect, which is mediated by halogen atoms covalently incorporated into the photosensitizer dye. Widely different outcomes were achieved in the case of EHA and IHA, with EHA being largely preferable in terms of net hyperpolarization.
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Affiliation(s)
- Yusuke Okuno
- Department of Chemistry, University of Wisconsin - Madison, 1101 University Ave., Madison, WI 53706, USA
| | - Silvia Cavagnero
- Department of Chemistry, University of Wisconsin - Madison, 1101 University Ave., Madison, WI 53706, USA.
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84
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Abadie C, Lothier J, Boex-Fontvieille E, Carroll A, Tcherkez G. Direct assessment of the metabolic origin of carbon atoms in glutamate from illuminated leaves using 13 C-NMR. THE NEW PHYTOLOGIST 2017; 216:1079-1089. [PMID: 28771732 DOI: 10.1111/nph.14719] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/21/2017] [Accepted: 06/25/2017] [Indexed: 05/21/2023]
Abstract
Glutamate (Glu) is the cornerstone of nitrogen assimilation and photorespiration in illuminated leaves. Despite this crucial role, our knowledge of the flux to Glu de novo synthesis is rather limited. Here, we used isotopic labelling with 13 CO2 and 13 C-NMR analyses to examine the labelling pattern and the appearance of multi-labelled species of Glu molecules to trace the origin of C-atoms found in Glu. We also compared this with 13 C-labelling patterns in Ala and Asp, which reflect citrate (and thus Glu) precursors, that is, pyruvate and oxaloacetate. Glu appeared to be less 13 C-labelled than Asp and Ala, showing that the Glu pool was mostly formed by 'old' carbon atoms. There were modest differences in intramolecular 13 C-13 C couplings between Glu C-2 and Asp C-3, showing that oxaloacetate metabolism to Glu biosynthesis did not involve C-atom redistribution by the Krebs cycle. The apparent carbon allocation increased with carbon net photosynthesis. However, when expressed relative to CO2 fixation, it was clearly higher at low CO2 while it did not change in 2% O2 , as compared to standard conditions. We conclude that Glu production from current photosynthetic carbon represents a small flux that is controlled by the gaseous environment, typically upregulated at low CO2 .
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Affiliation(s)
- Cyril Abadie
- Research School of Biology, College of Medicine, Biology and Environment, Australian National University, Canberra, ACT, 2601, Australia
| | - Jérémy Lothier
- IRHS, Agrocampus-Ouest, INRA, Université d'Angers, SFR 4207 QuaSaV, 42 Rue Georges Morel, Beaucouzé, 49071, France
| | - Edouard Boex-Fontvieille
- Laboratoire de Police Scientifique de Lyon, Institut National de Police Scientifique, 31 Avenue Franklin Roosevelt, Écully Cedex, 69134, France
| | - Adam Carroll
- Research School of Biology, College of Medicine, Biology and Environment, Australian National University, Canberra, ACT, 2601, Australia
| | - Guillaume Tcherkez
- Research School of Biology, College of Medicine, Biology and Environment, Australian National University, Canberra, ACT, 2601, Australia
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85
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Roy SS, Stevanato G, Rayner PJ, Duckett SB. Direct enhancement of nitrogen-15 targets at high-field by fast ADAPT-SABRE. JOURNAL OF MAGNETIC RESONANCE (SAN DIEGO, CALIF. : 1997) 2017; 285:55-60. [PMID: 29102821 PMCID: PMC5720475 DOI: 10.1016/j.jmr.2017.10.006] [Citation(s) in RCA: 33] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/12/2017] [Revised: 10/13/2017] [Accepted: 10/14/2017] [Indexed: 05/21/2023]
Abstract
Signal Amplification by Reversible Exchange (SABRE) is an attractive nuclear spin hyperpolarization technique capable of huge sensitivity enhancement in nuclear magnetic resonance (NMR) detection. The resonance condition of SABRE hyperpolarization depends on coherent spin mixing, which can be achieved naturally at a low magnetic field. The optimum transfer field to spin-1/2 heteronuclei is technically demanding, as it requires field strengths weaker than the earth's magnetic field for efficient spin mixing. In this paper, we illustrate an approach to achieve strong 15N SABRE hyperpolarization at high magnetic field by a radio frequency (RF) driven coherent transfer mechanism based on alternate pulsing and delay to achieve polarization transfer. The presented scheme is found to be highly robust and much faster than existing related methods, producing ∼3 orders of magnitude 15N signal enhancement within 2 s of RF pulsing.
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Affiliation(s)
- Soumya S Roy
- Department of Chemistry, University of York, Heslington, YO10 5DD York, United Kingdom.
| | - Gabriele Stevanato
- Institut des Sciences et Ingénierie Chimiques, Ecole Polytechnique Fédérale de Lausanne (EPFL), Lausanne 1015, Switzerland.
| | - Peter J Rayner
- Department of Chemistry, University of York, Heslington, YO10 5DD York, United Kingdom
| | - Simon B Duckett
- Department of Chemistry, University of York, Heslington, YO10 5DD York, United Kingdom.
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86
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Kovtunov KV, Kidd BE, Salnikov OG, Bales LB, Gemeinhardt ME, Gesiorski J, Shchepin RV, Chekmenev EY, Goodson BM, Koptyug IV. Imaging of Biomolecular NMR Signals Amplified by Reversible Exchange with Parahydrogen Inside an MRI Scanner. THE JOURNAL OF PHYSICAL CHEMISTRY. C, NANOMATERIALS AND INTERFACES 2017; 121:25994-25999. [PMID: 30701013 PMCID: PMC6349396 DOI: 10.1021/acs.jpcc.7b10549] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/20/2023]
Abstract
The Signal Amplification by Reversible Exchange (SABRE) technique employs exchange with singlet-state parahydrogen to efficiently generate high levels of nuclear spin polarization. Spontaneous SABRE has been shown previously to be efficient in the milli-Tesla and micro-Tesla regimes. We have recently demonstrated that high-field SABRE is also possible, where proton sites of molecules that are able to reversibly coordinate to a metal center can be hyperpolarized directly within high-field magnets, potentially offering the convenience of in situ hyperpolarization-based spectroscopy and imaging without sample shuttling. Here, we show efficient polarization transfer from parahydrogen (para-H2) to the 15N atoms of imidazole-15N2 and nicotinamide-15N achieved via high-field SABRE (HF-SABRE). Spontaneous transfer of spin order from the para-H2 protons to 15N atoms at the high magnetic field of an MRI scanner allows one not only to record enhanced 15N NMR spectra of in situ hyperpolarized biomolecules, but also to perform imaging using conventional MRI sequences. 2D 15N MRI of high-field SABRE-hyperpolarized imidazole with spatial resolution of 0.3×0.3 mm2 at 9.4 T magnetic field and a high signal-to-noise ratio (SNR) of ~99 was demonstrated. We show that 1H MRI of in situ HF-SABRE hyperpolarized biomolecules (e.g. imidazole-15N2) is also feasible. Taken together, these results show that heteronuclear (15N) and 1H spectroscopic detection and imaging of high-field-SABRE-hyperpolarized molecules are promising tools for a number of emerging applications.
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Affiliation(s)
- Kirill V. Kovtunov
- International Tomography Center SB RAS, Novosibirsk, 630090, Russia
- Novosibirsk State University, Novosibirsk, 630090, Russia
- Corresponding Author, ,
| | - Bryce E. Kidd
- Department of Chemistry and Biochemistry, Southern Illinois University, Carbondale, IL 62901, USA
- Corresponding Author, ,
| | - Oleg G. Salnikov
- International Tomography Center SB RAS, Novosibirsk, 630090, Russia
- Novosibirsk State University, Novosibirsk, 630090, Russia
| | - Liana B. Bales
- Department of Chemistry and Biochemistry, Southern Illinois University, Carbondale, IL 62901, USA
| | - Max E. Gemeinhardt
- Department of Chemistry and Biochemistry, Southern Illinois University, Carbondale, IL 62901, USA
| | - Jonathan Gesiorski
- Department of Chemistry and Biochemistry, Southern Illinois University, Carbondale, IL 62901, USA
| | - Roman V. Shchepin
- Vanderbilt Institute of Imaging Science (VUIIS), Department of Radiology, Vanderbilt University Medical Center, Nashville, TN 37232, USA
| | - Eduard Y. Chekmenev
- Department of Chemistry and Biochemistry, Southern Illinois University, Carbondale, IL 62901, USA
- Russian Academy of Sciences, Moscow, 119991, Russia
- Vanderbilt Institute of Imaging Science (VUIIS), Department of Radiology, Vanderbilt University Medical Center, Nashville, TN 37232, USA
| | - Boyd M. Goodson
- Department of Chemistry and Biochemistry, Southern Illinois University, Carbondale, IL 62901, USA
- Materials Technology Center, Southern Illinois University, Carbondale, IL 62901, USA
| | - Igor V. Koptyug
- International Tomography Center SB RAS, Novosibirsk, 630090, Russia
- Novosibirsk State University, Novosibirsk, 630090, Russia
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87
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Roy SS, Norcott P, Rayner PJ, Green GGR, Duckett SB. A Simple Route to Strong Carbon-13 NMR Signals Detectable for Several Minutes. Chemistry 2017; 23:10496-10500. [PMID: 28627764 PMCID: PMC5582603 DOI: 10.1002/chem.201702767] [Citation(s) in RCA: 32] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/16/2017] [Indexed: 01/14/2023]
Abstract
Nuclear magnetic resonance (NMR) and magnetic resonance imaging (MRI) suffer from low sensitivity and limited nuclear spin memory lifetimes. Although hyperpolarization techniques increase sensitivity, there is also a desire to increase relaxation times to expand the range of applications addressable by these methods. Here, we demonstrate a route to create hyperpolarized magnetization in 13 C nuclear spin pairs that last much longer than normal lifetimes by storage in a singlet state. By combining molecular design and low-field storage with para-hydrogen derived hyperpolarization, we achieve more than three orders of signal amplification relative to equilibrium Zeeman polarization and an order of magnitude extension in state lifetime. These studies use a range of specifically synthesized pyridazine derivatives and dimethyl p-tolyl phenyl pyridazine is the most successful, achieving a lifetime of about 190 s in low-field, which leads to a 13 C-signal that is visible for 10 minutes.
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Affiliation(s)
- Soumya S. Roy
- Department of ChemistryUniversity of YorkHeslington, YorkYO10 5DDUK
| | - Philip Norcott
- Department of ChemistryUniversity of YorkHeslington, YorkYO10 5DDUK
| | - Peter J. Rayner
- Department of ChemistryUniversity of YorkHeslington, YorkYO10 5DDUK
| | - Gary G. R. Green
- York Neuroimaging CentreThe Biocentre, York Science Park Innovation Way, HeslingtonYorkYO10 5NYUK
| | - Simon B. Duckett
- Department of ChemistryUniversity of YorkHeslington, YorkYO10 5DDUK
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88
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Nishihara T, Kameyama Y, Nonaka H, Takakusagi Y, Hyodo F, Ichikawa K, Sando S. A Strategy to Design Hyperpolarized
13
C Magnetic Resonance Probes Using [1‐
13
C]α‐Amino Acid as a Scaffold Structure. Chem Asian J 2017; 12:949-953. [DOI: 10.1002/asia.201700098] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/20/2017] [Revised: 03/19/2017] [Indexed: 12/26/2022]
Affiliation(s)
- Tatsuya Nishihara
- Department of Chemistry and Biotechnology Graduate School of Engineering The University of Tokyo 7-3-1 Hongo Bunkyo-ku Tokyo 113-8656 Japan
| | - Yutaka Kameyama
- INAMORI Frontier Research Center Kyushu University 744 Motooka Nishi-ku Fukuoka 819-0395 Japan
| | - Hiroshi Nonaka
- Department of Chemistry and Biotechnology Graduate School of Engineering The University of Tokyo 7-3-1 Hongo Bunkyo-ku Tokyo 113-8656 Japan
| | - Yoichi Takakusagi
- Incubation Center for Advanced Medical Science Kyushu University 3-1-1 Maidashi Higashi-ku Fukuoka 812-8582 Japan
| | - Fuminori Hyodo
- Incubation Center for Advanced Medical Science Kyushu University 3-1-1 Maidashi Higashi-ku Fukuoka 812-8582 Japan
- Innovation Center for Medical Redox Navigation Kyushu University 3-1-1 Maidashi Higashi-ku Fukuoka 812-8582 Japan
| | - Kazuhiro Ichikawa
- Incubation Center for Advanced Medical Science Kyushu University 3-1-1 Maidashi Higashi-ku Fukuoka 812-8582 Japan
- Innovation Center for Medical Redox Navigation Kyushu University 3-1-1 Maidashi Higashi-ku Fukuoka 812-8582 Japan
| | - Shinsuke Sando
- Department of Chemistry and Biotechnology Graduate School of Engineering The University of Tokyo 7-3-1 Hongo Bunkyo-ku Tokyo 113-8656 Japan
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89
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Stevanato G, Eills J, Bengs C, Pileio G. A pulse sequence for singlet to heteronuclear magnetization transfer: S2hM. JOURNAL OF MAGNETIC RESONANCE (SAN DIEGO, CALIF. : 1997) 2017; 277:169-178. [PMID: 28314207 DOI: 10.1016/j.jmr.2017.03.002] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/27/2017] [Revised: 02/28/2017] [Accepted: 03/03/2017] [Indexed: 06/06/2023]
Abstract
We have recently demonstrated, in the context of para-hydrogen induced polarization (PHIP), the conversion of hyperpolarized proton singlet order into heteronuclear magnetisation can be efficiently achieved via a new sequence named S2hM (Singlet to heteronuclear Magnetisation). In this paper we give a detailed theoretical description, supported by an experimental illustration, of S2hM. Theory and experiments on thermally polarized samples demonstrate the proposed method is robust to frequency offset mismatches and radiofrequency field inhomogeneities. The simple implementation, optimisation and the high conversion efficiency, under various regimes of magnetic equivalence, makes S2hM an excellent candidate for a widespread use, particularly within the PHIP arena.
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Affiliation(s)
- Gabriele Stevanato
- Chemistry, University of Southampton, Southampton, United Kingdom; Institut des Sciences et Ingénierie Chimiques, Ecole Polytechnique Fédérale de Lausanne (EPFL), CH-1015 Lausanne, Switzerland
| | - James Eills
- Chemistry, University of Southampton, Southampton, United Kingdom
| | - Christian Bengs
- Chemistry, University of Southampton, Southampton, United Kingdom
| | - Giuseppe Pileio
- Chemistry, University of Southampton, Southampton, United Kingdom.
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90
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Design of a 15N Molecular Unit to Achieve Long Retention of Hyperpolarized Spin State. Sci Rep 2017; 7:40104. [PMID: 28067292 PMCID: PMC5220364 DOI: 10.1038/srep40104] [Citation(s) in RCA: 32] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/26/2016] [Accepted: 11/30/2016] [Indexed: 11/25/2022] Open
Abstract
Nuclear hyperpolarization is a phenomenon that can be used to improve the sensitivity of magnetic resonance molecular sensors. However, such sensors typically suffer from short hyperpolarization lifetime. Herein we report that [15N, D14]trimethylphenylammonium (TMPA) has a remarkably long spin–lattice relaxation time (1128 s, 14.1 T, 30 °C, D2O) on its 15N nuclei and achieves a long retention of the hyperpolarized state. [15N, D14]TMPA-based hyperpolarized sensor for carboxylesterase allowed the highly sensitive analysis of enzymatic reaction by 15N NMR for over 40 min in phophate-buffered saline (H2O, pH 7.4, 37 °C).
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91
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Stevanato G. Alternating Delays Achieve Polarization Transfer (ADAPT) to heteronuclei in PHIP experiments. JOURNAL OF MAGNETIC RESONANCE (SAN DIEGO, CALIF. : 1997) 2017; 274:148-162. [PMID: 27894879 DOI: 10.1016/j.jmr.2016.10.009] [Citation(s) in RCA: 22] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/05/2016] [Revised: 10/10/2016] [Accepted: 10/13/2016] [Indexed: 06/06/2023]
Abstract
A new methodology for producing hyperpolarized 13C nuclei in small organic systems via parahydrogen induced polarization (PHIP) is proposed: ADAPT (Alternating Delays Achieve Polarization Transfer). The theoretical foundation of the process is investigated in some detail and experimental examples demonstrating the viability of the approach are provided as well. The number of adjustable parameters is fewer than most of other conversion schemes. The achieved theoretical heteronuclear polarization is close to unity for any examined magnetic equivalence regime. The duration of the pulse sequence, which was successfully implemented, can be shorter than other established methods reducing possible relaxation losses. The conversion scheme is robust to B1 inhomogeneities, but more sensitive to off-resonance RF irradiation.
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Affiliation(s)
- Gabriele Stevanato
- School of Chemistry, University of Southampton, University Road, Southampton, UK; Institut des Sciences et Ingénierie Chimiques, Ecole Polytechnique Fédérale de Lausanne (EPFL), Lausanne 1015, Switzerland.
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92
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Kotlarchyk M, Thurston GM. Basis for calculating cross sections for nuclear magnetic resonance spin-modulated polarized neutron scattering. J Chem Phys 2016; 145:244201. [PMID: 28049341 DOI: 10.1063/1.4972994] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
In this work we study the potential for utilizing the scattering of polarized neutrons from nuclei whose spin has been modulated using nuclear magnetic resonance (NMR). From first principles, we present an in-depth development of the differential scattering cross sections that would arise in such measurements from a hypothetical target system containing nuclei with non-zero spins. In particular, we investigate the modulation of the polarized scattering cross sections following the application of radio frequency pulses that impart initial transverse rotations to selected sets of spin-1/2 nuclei. The long-term aim is to provide a foundational treatment of the scattering cross section associated with enhancing scattering signals from selected nuclei using NMR techniques, thus employing minimal chemical or isotopic alterations, so as to advance the knowledge of macromolecular or liquid structure.
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Affiliation(s)
- Michael Kotlarchyk
- School of Physics and Astronomy, Rochester Institute of Technology, Rochester, New York 14623, USA
| | - George M Thurston
- School of Physics and Astronomy, Rochester Institute of Technology, Rochester, New York 14623, USA
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93
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Kim Y, Liu M, Hilty C. Parallelized Ligand Screening Using Dissolution Dynamic Nuclear Polarization. Anal Chem 2016; 88:11178-11183. [PMID: 27723298 DOI: 10.1021/acs.analchem.6b03382] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2023]
Abstract
Protein-ligand interactions are frequently screened using nuclear magnetic resonance (NMR) spectroscopy. The dissociation constant (KD) of a ligand of interest can be determined via a spin-spin relaxation measurement of a reporter ligand in a single scan when using hyperpolarization by means of dissolution dynamic nuclear polarization (D-DNP). Despite nearly instantaneous signal acquisition, a limitation of D-DNP for the screening of protein-ligand interactions is the required polarization time on the order of tens of minutes. Here, we introduce a multiplexed NMR experiment, where a single hyperpolarized ligand sample is rapidly mixed with protein injected into two flow cells. NMR detection is achieved simultaneously on both channels, resulting in a chemical shift resolved spin relaxation measurement. Spectral resolution allows the use of reference compounds for accurate quantification of concentrations. Simultaneous use of two concentration ratios between protein and ligand broadens the range of KD that is accurately measurable in a single experiment to at least an order of magnitude. In a comparison of inhibitors for the protein trypsin, the average KD values of benzamidine and benzylamine were found to be 12.6 ± 1.4 μM and 207 ± 22 μM from three measurements, based on KD = 142 μM assumed known for the reporter ligand 4-(trifluoromethyl)benzene-1-carboximidamide. Typical confidence ranges at 95% evaluated for single experiments were (8.3 μM, 20 μM) and (151 μM, 328 μM). The multiplexed detection of two or more hyperpolarized samples increases throughput of D-DNP by the same factor, improving the applicability to most multipoint measurements that would traditionally be achieved using titrations.
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Affiliation(s)
- Yaewon Kim
- Department of Chemistry, Texas A&M University , College Station, Texas 77843-3255, United States
| | - Mengxiao Liu
- Department of Chemistry, Texas A&M University , College Station, Texas 77843-3255, United States
| | - Christian Hilty
- Department of Chemistry, Texas A&M University , College Station, Texas 77843-3255, United States
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94
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Dracínský M, Pohl R. Determination of the Nucleic Acid Adducts Structure at the Nucleoside/Nucleotide Level by NMR Spectroscopy. Chem Res Toxicol 2016; 28:155-65. [PMID: 25584790 DOI: 10.1021/tx5004535] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
All living organisms are exposed to xenobiotics from the environment. The exposure can lead to the formation of covalent adducts of xenobiotics or their metabolites with nucleic acids (NAs).The knowledge of NA adduct structure provides valuable information n the mechanism of carcinogenesis on a molecular level. While NMR spectroscopy is extremely successful in structural analysis of many classes of molecules ranging from small inorganic and organic molecules to large biomacromolecules, the structural analysis of NA adducts by NMR spectroscopy is accompanied by some challenges. First, the structural diversity of the adducts is very large; the electrophilic species generated from the metabolism of xenobiotics can attack various atoms of the nucleobases, and new rings are frequently formed. The second challenge in the DNA adducts structure determination is the low sensitivity of NMR spectroscopy and low amount of the adducts isolated from in vivo experiments. Recent developments of NMR hardware and experimental methods have led, however, to unprecedented sensitivity. This contribution reviews NMR techniques that are commonly applied in the determination of nucleic acid adducts structure at the nucleoside/nucleotide level. These NMR techniques and the large structural heterogeneity of NA adducts are demonstrated on recent examples (mostly published after 2000) of NA adducts structure determined by NMR. Most of the examples report 2′-deoxyribonucles(t)ide derivatives, but RNA adducts are also briefly discussed. The influence of the formation of NA adducts on nucleoside conformation (particularly syn/anti orientation of the base) is also demonstrated on recent examples.
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95
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Roy SS, Rayner PJ, Norcott P, Green GGR, Duckett SB. Long-lived states to sustain SABRE hyperpolarised magnetisation. Phys Chem Chem Phys 2016; 18:24905-24911. [PMID: 27711398 PMCID: PMC5436088 DOI: 10.1039/c6cp02844f] [Citation(s) in RCA: 46] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/28/2016] [Accepted: 08/15/2016] [Indexed: 11/22/2022]
Abstract
The applicability of the magnetic resonance (MR) technique in the liquid phase is limited by poor sensitivity and short nuclear spin coherence times which are insufficient for many potential applications. Here we illustrate how it is possible to address both of these issues simultaneously by harnessing long-lived hyperpolarised spin states that are formed by adapting the Signal Amplification by Reversible Exchange (SABRE) technique. We achieve more than 4% net 1H-polarisation in a long-lived form that remains detectable for over ninety seconds by reference to proton pairs in the biologically important molecule nicotinamide and a pyrazine derivative whose in vivo imaging will offer a new route to probe disease in the future.
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Affiliation(s)
- Soumya S Roy
- Department of Chemistry, University of York, Heslington, York, YO10 5DD, UK.
| | - Peter J Rayner
- Department of Chemistry, University of York, Heslington, York, YO10 5DD, UK.
| | - Philip Norcott
- Department of Chemistry, University of York, Heslington, York, YO10 5DD, UK.
| | - Gary G R Green
- York Neuroimaging Centre, The Biocentre, York Science Park, Innovation Way, Heslington, York, YO10 5DD, UK
| | - Simon B Duckett
- Department of Chemistry, University of York, Heslington, York, YO10 5DD, UK.
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96
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Eshuis N, Aspers RLEG, van Weerdenburg BJA, Feiters MC, Rutjes FPJT, Wijmenga SS, Tessari M. Determination of long-range scalar (1)H-(1)H coupling constants responsible for polarization transfer in SABRE. JOURNAL OF MAGNETIC RESONANCE (SAN DIEGO, CALIF. : 1997) 2016; 265:59-66. [PMID: 26859865 DOI: 10.1016/j.jmr.2016.01.012] [Citation(s) in RCA: 46] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/18/2015] [Revised: 01/18/2016] [Accepted: 01/19/2016] [Indexed: 06/05/2023]
Abstract
SABRE (Signal Amplification By Reversible Exchange) nuclear spin hyperpolarization method can provide strongly enhanced NMR signals as a result of the reversible association of small molecules with para-hydrogen (p-H2) at an iridium metal complex. The conversion of p-H2 singlet order to enhanced substrate proton magnetization within such complex is driven by the scalar coupling interactions between the p-H2 derived hydrides and substrate nuclear spins. In the present study these long-range homonuclear couplings are experimentally determined for several SABRE substrates using an NMR pulse sequence for coherent hyperpolarization transfer at high magnetic field. Pyridine and pyrazine derivatives appear to have a similar ∼1.2 Hz (4)J coupling to p-H2 derived hydrides for their ortho protons, and a much lower (5)J coupling for their meta protons. Interestingly, the (4)J hydride-substrate coupling for five-membered N-heterocyclic substrates is well below 1 Hz.
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Affiliation(s)
- Nan Eshuis
- Radboud University, Institute for Molecules and Materials, Heyendaalseweg 135, 6525 AJ Nijmegen, The Netherlands.
| | - Ruud L E G Aspers
- Radboud University, Institute for Molecules and Materials, Heyendaalseweg 135, 6525 AJ Nijmegen, The Netherlands.
| | - Bram J A van Weerdenburg
- Radboud University, Institute for Molecules and Materials, Heyendaalseweg 135, 6525 AJ Nijmegen, The Netherlands.
| | - Martin C Feiters
- Radboud University, Institute for Molecules and Materials, Heyendaalseweg 135, 6525 AJ Nijmegen, The Netherlands.
| | - Floris P J T Rutjes
- Radboud University, Institute for Molecules and Materials, Heyendaalseweg 135, 6525 AJ Nijmegen, The Netherlands.
| | - Sybren S Wijmenga
- Radboud University, Institute for Molecules and Materials, Heyendaalseweg 135, 6525 AJ Nijmegen, The Netherlands.
| | - Marco Tessari
- Radboud University, Institute for Molecules and Materials, Heyendaalseweg 135, 6525 AJ Nijmegen, The Netherlands.
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97
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Okuno Y, Cavagnero S. Fluorescein: A Photo-CIDNP Sensitizer Enabling Hypersensitive NMR Data Collection in Liquids at Low Micromolar Concentration. J Phys Chem B 2016; 120:715-23. [PMID: 26744790 PMCID: PMC4879942 DOI: 10.1021/acs.jpcb.5b12339] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Photochemically induced dynamic nuclear polarization (photo-CIDNP) is a powerful approach for sensitivity enhancement in NMR spectroscopy. In liquids, intermolecular photo-CIDNP depends on the transient bimolecular reaction between photoexcited dye and sample of interest. Hence the extent of polarization is sample-concentration dependent. This study introduces fluorescein (FL) as a photo-CIDNP dye whose performance is exquisitely tailored to data collection at extremely low sample concentrations. The photo-CIDNP resonance intensities of tryptophan in the presence of either FL or FMN (i.e., the routinely employed flavin mononucleotide photosensitizer) in the liquid state show that FL yields superior sensitivity and enables rapid data collection down to an unprecedented 1 μM concentration. This result was achieved on a conventional spectrometer operating at 14.1 T and equipped with a room-temperature probe (i.e., noncryogenic). Kinetic simulations show that the excellent behavior of FL arises from its long excited-state triplet lifetime and superior photostability relative to conventional photo-CIDNP sensitizers.
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Affiliation(s)
- Yusuke Okuno
- Department of Chemistry, University of Wisconsin - Madison , 1101 University Avenue, Madison, Wisconsin 53706, United States
| | - Silvia Cavagnero
- Department of Chemistry, University of Wisconsin - Madison , 1101 University Avenue, Madison, Wisconsin 53706, United States
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98
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Kiryutin AS, Pravdivtsev AN, Ivanov KL, Grishin YA, Vieth HM, Yurkovskaya AV. A fast field-cycling device for high-resolution NMR: Design and application to spin relaxation and hyperpolarization experiments. JOURNAL OF MAGNETIC RESONANCE (SAN DIEGO, CALIF. : 1997) 2016; 263:79-91. [PMID: 26773525 DOI: 10.1016/j.jmr.2015.11.017] [Citation(s) in RCA: 37] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/29/2015] [Revised: 11/03/2015] [Accepted: 11/04/2015] [Indexed: 06/05/2023]
Abstract
A device for performing fast magnetic field-cycling NMR experiments is described. A key feature of this setup is that it combines fast switching of the external magnetic field and high-resolution NMR detection. The field-cycling method is based on precise mechanical positioning of the NMR probe with the mounted sample in the inhomogeneous fringe field of the spectrometer magnet. The device enables field variation over several decades (from 100μT up to 7T) within less than 0.3s; progress in NMR probe design provides NMR linewidths of about 10(-3)ppm. The experimental method is very versatile and enables site-specific studies of spin relaxation (NMRD, LLSs) and spin hyperpolarization (DNP, CIDNP, and SABRE) at variable magnetic field and at variable temperature. Experimental examples of such studies are demonstrated; advantages of the experimental method are described and existing challenges in the field are outlined.
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Affiliation(s)
- Alexey S Kiryutin
- International Tomography Center, Siberian Branch of the Russian Academy of Science, Institutskaya 3a, Novosibirsk 630090, Russia; Novosibirsk State University, Pirogova 2, Novosibirsk 630090, Russia.
| | - Andrey N Pravdivtsev
- International Tomography Center, Siberian Branch of the Russian Academy of Science, Institutskaya 3a, Novosibirsk 630090, Russia; Novosibirsk State University, Pirogova 2, Novosibirsk 630090, Russia
| | - Konstantin L Ivanov
- International Tomography Center, Siberian Branch of the Russian Academy of Science, Institutskaya 3a, Novosibirsk 630090, Russia; Novosibirsk State University, Pirogova 2, Novosibirsk 630090, Russia
| | - Yuri A Grishin
- Institute of Chemical Kinetics and Combustion, Siberian Branch of the Russian Academy of Science, Institutskaya 3, Novosibirsk 630090, Russia
| | - Hans-Martin Vieth
- International Tomography Center, Siberian Branch of the Russian Academy of Science, Institutskaya 3a, Novosibirsk 630090, Russia; Institut für Experimentalphysik, Freie Universität Berlin, Arnimallee 14, D-14195 Berlin, Germany.
| | - Alexandra V Yurkovskaya
- International Tomography Center, Siberian Branch of the Russian Academy of Science, Institutskaya 3a, Novosibirsk 630090, Russia; Novosibirsk State University, Pirogova 2, Novosibirsk 630090, Russia
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99
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Muñoz-Gómez JL, Monteagudo E, Lloveras V, Parella T, Veciana J, Vidal-Gancedo J. Optimized polarization build-up times in dissolution DNP-NMR using a benzyl amino derivative of BDPA. RSC Adv 2016. [DOI: 10.1039/c6ra00635c] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
Abstract
A BAm-BDPA radical has proved to be a quick and efficient polarizing agent, showing optimum 13C NMR signal enhancements per polarization time unit.
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Affiliation(s)
- J. L. Muñoz-Gómez
- Institut de Ciència de Materials de Barcelona
- (ICMAB-CSIC) Campus Universitari de Bellaterra
- E-08193 Cerdanyola del Vallès
- Spain
- Networking Research Center on Bioengineering
| | - E. Monteagudo
- Servei de Ressonància Magnètica Nuclear
- Facultat de Ciències i Biociències
- Universitat Autònoma de Barcelona
- E-08193 Bellaterra
- Spain
| | - V. Lloveras
- Institut de Ciència de Materials de Barcelona
- (ICMAB-CSIC) Campus Universitari de Bellaterra
- E-08193 Cerdanyola del Vallès
- Spain
- Networking Research Center on Bioengineering
| | - T. Parella
- Servei de Ressonància Magnètica Nuclear
- Facultat de Ciències i Biociències
- Universitat Autònoma de Barcelona
- E-08193 Bellaterra
- Spain
| | - J. Veciana
- Institut de Ciència de Materials de Barcelona
- (ICMAB-CSIC) Campus Universitari de Bellaterra
- E-08193 Cerdanyola del Vallès
- Spain
- Networking Research Center on Bioengineering
| | - J. Vidal-Gancedo
- Institut de Ciència de Materials de Barcelona
- (ICMAB-CSIC) Campus Universitari de Bellaterra
- E-08193 Cerdanyola del Vallès
- Spain
- Networking Research Center on Bioengineering
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100
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Dale MW, Wedge CJ. Optically generated hyperpolarization for sensitivity enhancement in solution-state NMR spectroscopy. Chem Commun (Camb) 2016; 52:13221-13224. [DOI: 10.1039/c6cc06651h] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]
Abstract
Using optical excitation to generate radical triplet pairs the sensitivity of solution-state NMR can be enhanced without microwave pumping.
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