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Chen H, Wang Q. Regulatory mechanisms of lipid biosynthesis in microalgae. Biol Rev Camb Philos Soc 2021; 96:2373-2391. [PMID: 34101323 DOI: 10.1111/brv.12759] [Citation(s) in RCA: 40] [Impact Index Per Article: 13.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/08/2020] [Revised: 05/26/2021] [Accepted: 05/27/2021] [Indexed: 02/01/2023]
Abstract
Microalgal lipids are highly promising feedstocks for biofuel production. Microalgal lipids, especially triacylglycerol, and practical applications of these compounds have received increasing attention in recent years. For the commercial use of microalgal lipids to be feasible, many fundamental biological questions must be addressed based on detailed studies of algal biology, including how lipid biosynthesis occurs and is regulated. Here, we review the current understanding of microalgal lipid biosynthesis, with a focus on the underlying regulatory mechanisms. We also present possible solutions for overcoming various obstacles to understanding the basic biology of microalgal lipid biosynthesis and the practical application of microalgae-based lipids. This review will provide a theoretical reference for both algal researchers and decision makers regarding the future directions of microalgal research, particularly pertaining to microalgal-based lipid biosynthesis.
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Affiliation(s)
- Hui Chen
- State Key Laboratory of Crop Stress Adaptation and Improvement, School of Life Sciences, Henan University, Kaifeng, 475004, China
| | - Qiang Wang
- State Key Laboratory of Crop Stress Adaptation and Improvement, School of Life Sciences, Henan University, Kaifeng, 475004, China
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Brandenburg J, Blomqvist J, Shapaval V, Kohler A, Sampels S, Sandgren M, Passoth V. Oleaginous yeasts respond differently to carbon sources present in lignocellulose hydrolysate. BIOTECHNOLOGY FOR BIOFUELS 2021; 14:124. [PMID: 34051838 PMCID: PMC8164748 DOI: 10.1186/s13068-021-01974-2] [Citation(s) in RCA: 22] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/25/2021] [Accepted: 05/17/2021] [Indexed: 05/17/2023]
Abstract
BACKGROUND Microbial oils, generated from lignocellulosic material, have great potential as renewable and sustainable alternatives to fossil-based fuels and chemicals. By unravelling the diversity of lipid accumulation physiology in different oleaginous yeasts grown on the various carbon sources present in lignocellulose hydrolysate (LH), new targets for optimisation of lipid accumulation can be identified. Monitoring lipid formation over time is essential for understanding lipid accumulation physiology. This study investigated lipid accumulation in a variety of oleaginous ascomycetous and basidiomycetous strains grown in glucose and xylose and followed lipid formation kinetics of selected strains in wheat straw hydrolysate (WSH). RESULTS Twenty-nine oleaginous yeast strains were tested for their ability to utilise glucose and xylose, the main sugars present in WSH. Evaluation of sugar consumption and lipid accumulation revealed marked differences in xylose utilisation capacity between the yeast strains, even between those belonging to the same species. Five different promising strains, belonging to the species Lipomyces starkeyi, Rhodotorula glutinis, Rhodotorula babjevae and Rhodotorula toruloides, were grown on undiluted wheat straw hydrolysate and lipid accumulation was followed over time, using Fourier transform-infrared (FTIR) spectroscopy. All five strains were able to grow on undiluted WSH and to accumulate lipids, but to different extents and with different productivities. R. babjevae DVBPG 8058 was the best-performing strain, accumulating 64.8% of cell dry weight (CDW) as lipids. It reached a culture density of 28 g/L CDW in batch cultivation, resulting in a lipid content of 18.1 g/L and yield of 0.24 g lipids per g carbon source. This strain formed lipids from the major carbon sources in hydrolysate, glucose, acetate and xylose. R. glutinis CBS 2367 also consumed these carbon sources, but when assimilating xylose it consumed intracellular lipids simultaneously. Rhodotorula strains contained a higher proportion of polyunsaturated fatty acids than the two tested Lipomyces starkeyi strains. CONCLUSIONS There is considerable metabolic diversity among oleaginous yeasts, even between closely related species and strains, especially when converting xylose to biomass and lipids. Monitoring the kinetics of lipid accumulation and identifying the molecular basis of this diversity are keys to selecting suitable strains for high lipid production from lignocellulose.
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Affiliation(s)
- Jule Brandenburg
- Department of Molecular Sciences, Swedish University of Agricultural Sciences, BioCenter, Box 7015, 75007, Uppsala, Sweden
| | - Johanna Blomqvist
- Department of Molecular Sciences, Swedish University of Agricultural Sciences, BioCenter, Box 7015, 75007, Uppsala, Sweden
| | - Volha Shapaval
- Faculty of Science and Technology, Norwegian University of Life Sciences, P.O. Box 5003, 1432, Ås, Norway
| | - Achim Kohler
- Faculty of Science and Technology, Norwegian University of Life Sciences, P.O. Box 5003, 1432, Ås, Norway
| | - Sabine Sampels
- Department of Molecular Sciences, Swedish University of Agricultural Sciences, BioCenter, Box 7015, 75007, Uppsala, Sweden
| | - Mats Sandgren
- Department of Molecular Sciences, Swedish University of Agricultural Sciences, BioCenter, Box 7015, 75007, Uppsala, Sweden
| | - Volkmar Passoth
- Department of Molecular Sciences, Swedish University of Agricultural Sciences, BioCenter, Box 7015, 75007, Uppsala, Sweden.
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Maneechote W, Cheirsilp B. Stepwise-incremental physicochemical factors induced acclimation and tolerance in oleaginous microalgae to crucial outdoor stresses and improved properties as biodiesel feedstocks. BIORESOURCE TECHNOLOGY 2021; 328:124850. [PMID: 33611021 DOI: 10.1016/j.biortech.2021.124850] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/31/2020] [Revised: 02/08/2021] [Accepted: 02/09/2021] [Indexed: 06/12/2023]
Abstract
Stress-tolerant oleaginous microalgae are promising for economical outdoor cultivation and biofuel production. This study aimed to induce acclimation and adaptive evolution of oleaginous Scenedesmus sp. SPP to tolerate crucial outdoor stresses by stepwise increasing of physicochemical factors: salinity, light intensity and temperature. The acclimatized strains showed better growth and accumulated 20-30% higher contents of lipids and chlorophylls. The adaptive-evolved strain showed greater tolerance to culture stresses by giving > 2-fold higher biomass under nitrogen rich and accumulating > 1.5-fold higher lipid content under nitrogen starvation compared to the parental strain. Moreover, stepwise increasing of multi-stresses successfully induced the multi-tolerance of the adaptive-evolved strain and gave the highest lipid content of 44.1 ± 1.5%. The extracted lipids from acclimatized/evolved strains show improved prospect fuel properties in terms of high cetane number and oxidative stability. These results show the effectiveness of stepwise-incremental physicochemical factors to intensify potential of microalgae for outdoor cultivation and as biodiesel feedstocks.
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Affiliation(s)
- Wageeporn Maneechote
- Center of Excellence in Innovative Biotechnology for Sustainable Utilization of Bioresources, Program of Biotechnology, Faculty of Agro-Industry, Prince of Songkla University, Hat Yai, Songkhla 90112, Thailand
| | - Benjamas Cheirsilp
- Center of Excellence in Innovative Biotechnology for Sustainable Utilization of Bioresources, Program of Biotechnology, Faculty of Agro-Industry, Prince of Songkla University, Hat Yai, Songkhla 90112, Thailand.
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Yang Q, Lu T, Yan J, Li J, Zhou H, Pan X, Lu Y, He N, Ling X. Regulation of polyunsaturated fatty acids synthesis by enhancing carotenoid-mediated endogenous antioxidant capacity in Schizochytrium sp. ALGAL RES 2021. [DOI: 10.1016/j.algal.2021.102238] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
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55
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Cui N, Xiao J, Feng Y, Zhao Y, Yu X, Xu JW, Li T, Zhao P. Antioxidants enhance lipid productivity in Heveochlorella sp. Yu. ALGAL RES 2021. [DOI: 10.1016/j.algal.2021.102235] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
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56
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Wu S, Shi J, Chen J, Hu D, Zang L, Song B. Synthesis, Antibacterial Activity, and Mechanisms of Novel 6-Sulfonyl-1,2,4-triazolo[3,4- b][1,3,4]thiadiazole Derivatives. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2021; 69:4645-4654. [PMID: 33871992 DOI: 10.1021/acs.jafc.1c01204] [Citation(s) in RCA: 44] [Impact Index Per Article: 14.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/24/2023]
Abstract
A series of novel 6-sulfonyl-1,2,4-triazolo[3,4-b][1,3,4]thiadiazole derivatives were designed and synthesized. CoMFA models were established to analyze the quantitative structure-activity relationships on the basis of the EC50 values of the compounds. The models were used to design and synthesize compounds 32 and 33 with higher activities. The EC50 values of compound 33 against Xanthomonas oryzae pv. oryzae (Xoo) and Xanthomonas oryzae pv. oryzicola (Xoc) were 0.59 and 1.63 mg/L, respectively, which were higher than those of thiodiazole copper (90.43 and 97.93 mg/L) and bismerthiazol (68.37 and 75.59 mg/L). Moreover, protective activities of compound 33 against bacterial leaf streak (BLS) and bacterial leaf blight (BLB) were 49.65% and 49.42%, respectively, which were superior to those of thiodiazole copper (44.28% and 41.51%) and bismerthiazol (38.89% and 40.09%). Protective activity of compound 33 against BLS was closely related to the improvement of defense-related enzyme activities, chlorophyll content, and photosynthesis activation. This is consistent with the upregulated expression of defense responses and photosynthesis-related proteins.
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Affiliation(s)
- Sikai Wu
- State Key Laboratory Breeding Base of Green Pesticide and Agricultural Bioengineering, Key Laboratory of Green Pesticide and Agricultural Bioengineering, Ministry of Education, Center for Research and Development of Fine Chemicals, Guizhou University, Guiyang 550025, People's Republic of China
| | - Jing Shi
- State Key Laboratory Breeding Base of Green Pesticide and Agricultural Bioengineering, Key Laboratory of Green Pesticide and Agricultural Bioengineering, Ministry of Education, Center for Research and Development of Fine Chemicals, Guizhou University, Guiyang 550025, People's Republic of China
| | - Jixiang Chen
- State Key Laboratory Breeding Base of Green Pesticide and Agricultural Bioengineering, Key Laboratory of Green Pesticide and Agricultural Bioengineering, Ministry of Education, Center for Research and Development of Fine Chemicals, Guizhou University, Guiyang 550025, People's Republic of China
| | - Deyu Hu
- State Key Laboratory Breeding Base of Green Pesticide and Agricultural Bioengineering, Key Laboratory of Green Pesticide and Agricultural Bioengineering, Ministry of Education, Center for Research and Development of Fine Chemicals, Guizhou University, Guiyang 550025, People's Republic of China
| | - Liansheng Zang
- State Key Laboratory Breeding Base of Green Pesticide and Agricultural Bioengineering, Key Laboratory of Green Pesticide and Agricultural Bioengineering, Ministry of Education, Center for Research and Development of Fine Chemicals, Guizhou University, Guiyang 550025, People's Republic of China
| | - Baoan Song
- State Key Laboratory Breeding Base of Green Pesticide and Agricultural Bioengineering, Key Laboratory of Green Pesticide and Agricultural Bioengineering, Ministry of Education, Center for Research and Development of Fine Chemicals, Guizhou University, Guiyang 550025, People's Republic of China
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Perera IA, Abinandan S, R Subashchandrabose S, Venkateswarlu K, Naidu R, Megharaj M. Microalgal-bacterial consortia unveil distinct physiological changes to facilitate growth of microalgae. FEMS Microbiol Ecol 2021; 97:6105210. [PMID: 33476378 DOI: 10.1093/femsec/fiab012] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/22/2020] [Accepted: 01/19/2021] [Indexed: 01/05/2023] Open
Abstract
Physiological changes that drive the microalgal-bacterial consortia are poorly understood so far. In the present novel study, we initially assessed five morphologically distinct microalgae for their ability in establishing consortia in Bold's basal medium with a bacterial strain, Variovorax paradoxus IS1, all isolated from wastewaters. Tetradesmus obliquus IS2 and Coelastrella sp. IS3 were further selected for gaining insights into physiological changes, including those of metabolomes in consortia involving V. paradoxus IS1. The distinct parameters investigated were pigments (chlorophyll a, b, and carotenoids), reactive oxygen species (ROS), lipids and metabolites that are implicated in major metabolic pathways. There was a significant increase (>1.2-fold) in pigments, viz., chlorophyll a, b and carotenoids, decrease in ROS and an enhanced lipid yield (>2-fold) in consortia than in individual cultures. In addition, the differential regulation of cellular metabolites such as sugars, amino acids, organic acids and phytohormones was distinct among the two microalgal-bacterial consortia. Our results thus indicate that the selected microalgal strains, T. obliquus IS2 and Coelastrella sp. IS3, developed efficient consortia with V. paradoxus IS1 by effecting the required physiological changes, including metabolomics. Such microalgal-bacterial consortia could largely be used in wastewater treatment and for production of value-added metabolites.
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Affiliation(s)
- Isiri Adhiwarie Perera
- Global Centre for Environmental Remediation (GCER), Faculty of Science, The University of Newcastle, ATC Building, Callaghan, NSW 2308, Australia
| | - Sudharsanam Abinandan
- Global Centre for Environmental Remediation (GCER), Faculty of Science, The University of Newcastle, ATC Building, Callaghan, NSW 2308, Australia.,Cooperative Research Centre for Contamination Assessment and Remediation of Environment (CRC CARE), The University of Newcastle, ATC Building, Callaghan, NSW 2308, Australia
| | - Suresh R Subashchandrabose
- Global Centre for Environmental Remediation (GCER), Faculty of Science, The University of Newcastle, ATC Building, Callaghan, NSW 2308, Australia
| | - Kadiyala Venkateswarlu
- Department of Microbiology, Sri Krishnadevaraya University, Anantapuramu 515003, Andhra Pradesh, India
| | - Ravi Naidu
- Global Centre for Environmental Remediation (GCER), Faculty of Science, The University of Newcastle, ATC Building, Callaghan, NSW 2308, Australia.,Cooperative Research Centre for Contamination Assessment and Remediation of Environment (CRC CARE), The University of Newcastle, ATC Building, Callaghan, NSW 2308, Australia
| | - Mallavarapu Megharaj
- Global Centre for Environmental Remediation (GCER), Faculty of Science, The University of Newcastle, ATC Building, Callaghan, NSW 2308, Australia.,Cooperative Research Centre for Contamination Assessment and Remediation of Environment (CRC CARE), The University of Newcastle, ATC Building, Callaghan, NSW 2308, Australia
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Pascoal PV, Ribeiro DM, Cereijo CR, Santana H, Nascimento RC, Steindorf AS, Calsing LCG, Formighieri EF, Brasil BSAF. Biochemical and phylogenetic characterization of the wastewater tolerant Chlamydomonas biconvexa Embrapa|LBA40 strain cultivated in palm oil mill effluent. PLoS One 2021; 16:e0249089. [PMID: 33826653 PMCID: PMC8026047 DOI: 10.1371/journal.pone.0249089] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/12/2020] [Accepted: 03/11/2021] [Indexed: 11/19/2022] Open
Abstract
The increasing demand for water, food and energy poses challenges for the world´s sustainability. Tropical palm oil is currently the major source of vegetable oil worldwide with a production that exceeds 55 million tons per year, while generating over 200 million tons of palm oil mill effluent (POME). It could potentially be used as a substrate for production of microalgal biomass though. In this study, the microalgal strain Chlamydomonas biconvexa Embrapa|LBA40, originally isolated from a sugarcane vinasse stabilization pond, was selected among 17 strains tested for growth in POME retrieved from anaerobic ponds of a palm oil industrial plant located within the Amazon rainforest region. During cultivation in POME, C. biconvexa Embrapa|LBA40 biomass productivity reached 190.60 mgDW • L-1 • d-1 using 15L airlift flat plate photobioreactors. Carbohydrates comprised the major fraction of algal biomass (31.96%), while the lipidic fraction reached up to 11.3% of dry mass. Reductions of 99% in ammonium and nitrite, as well as 98% reduction in phosphate present in POME were detected after 5 days of algal cultivation. This suggests that the aerobic pond stage, usually used in palm oil industrial plants to reduce POME inorganic load, could be substituted by high rate photobioreactors, significantly reducing the time and area requirements for wastewater treatment. In addition, the complete mitochondrial genome of C. biconvexa Embrapa|LBA40 strain was sequenced, revealing a compact mitogenome, with 15.98 kb in size, a total of 14 genes, of which 9 are protein coding genes. Phylogenetic analysis confirmed the strain taxonomic status within the Chlamydomonas genus, opening up opportunities for future genetic modification and molecular breeding programs in these species.
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Affiliation(s)
- Patrícia Verdugo Pascoal
- Embrapa Agroenergia, Brasília, Distrito Federal, Brazil
- Universidade Federal da Bahia, Salvador, Bahia, Brazil
| | - Dágon Manoel Ribeiro
- Embrapa Agroenergia, Brasília, Distrito Federal, Brazil
- Universidade de Brasília, Brasília, Distrito Federal, Brazil
- Universidade Zambeze, Sofala, Mozambique
| | | | - Hugo Santana
- Embrapa Agroenergia, Brasília, Distrito Federal, Brazil
| | - Rodrigo Carvalho Nascimento
- Embrapa Agroenergia, Brasília, Distrito Federal, Brazil
- Universidade Federal do Tocantins, Gurupi, Tocantins, Brazil
| | | | | | | | - Bruno S. A. F. Brasil
- Embrapa Agroenergia, Brasília, Distrito Federal, Brazil
- Universidade Federal da Bahia, Salvador, Bahia, Brazil
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59
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Zhao Y, Song X, Zhao P, Li T, Xu JW, Yu X. Role of melatonin in regulation of lipid accumulation, autophagy and salinity-induced oxidative stress in microalga Monoraphidium sp. QLY-1. ALGAL RES 2021. [DOI: 10.1016/j.algal.2021.102196] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/05/2023]
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Optimizing Docosahexaenoic Acid (DHA) Production by Schizochytrium sp. Grown on Waste Glycerol. ENERGIES 2021. [DOI: 10.3390/en14061685] [Citation(s) in RCA: 13] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
Abstract
The aim of this study was to optimize biomass and docosahexaenoic acid (DHA) production by Schizochytrium sp. grown on waste glycerol as an organic carbon source. Parameters having a significant effect on biomass and DHA yields were screened using the fractional Plackett–Burman design and the response surface methodology (RSM). Schizochytrium sp. growth was most significantly influenced by crude glycerin concentration in the growth medium (150 g/dm3), process temperature (27 °C), oxygen in the bioreactor (49.99% v/v), and the concentration of peptone as a source of nitrogen (9.99 g/dm3). The process parameter values identified as optimal for producing high DHA concentrations in the biomass were as follows: glycerin concentration 149.99 g/dm3, temperature 26 °C, oxygen concentration 30% (v/v), and peptone concentration 2.21 g/dm3. The dry cell weight (DCW) obtained under actual laboratory conditions was 66.69 ± 0.66 g/dm3, i.e., 1.27% lower than the predicted value. The DHA concentration obtained in the actual culture was at 17.25 ± 0.33 g/dm3, which was 3.03% lower than the predicted value. The results obtained suggest that a two-step culture system should be employed, with the first phase focused on high production of Schizochytrium sp. biomass, and the second focused on increasing DHA concentration in the cells.
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Jersin RÅ, Tallapragada DSP, Madsen A, Skartveit L, Fjære E, McCann A, Lawrence-Archer L, Willems A, Bjune JI, Bjune MS, Våge V, Nielsen HJ, Thorsen HL, Nedrebø BG, Busch C, Steen VM, Blüher M, Jacobson P, Svensson PA, Fernø J, Rydén M, Arner P, Nygård O, Claussnitzer M, Ellingsen S, Madsen L, Sagen JV, Mellgren G, Dankel SN. Role of the Neutral Amino Acid Transporter SLC7A10 in Adipocyte Lipid Storage, Obesity, and Insulin Resistance. Diabetes 2021; 70:680-695. [PMID: 33408126 DOI: 10.2337/db20-0096] [Citation(s) in RCA: 20] [Impact Index Per Article: 6.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 01/30/2020] [Accepted: 12/14/2020] [Indexed: 11/13/2022]
Abstract
Elucidation of mechanisms that govern lipid storage, oxidative stress, and insulin resistance may lead to improved therapeutic options for type 2 diabetes and other obesity-related diseases. Here, we find that adipose expression of the small neutral amino acid transporter SLC7A10, also known as alanine-serine-cysteine transporter-1 (ASC-1), shows strong inverse correlates with visceral adiposity, insulin resistance, and adipocyte hypertrophy across multiple cohorts. Concordantly, loss of Slc7a10 function in zebrafish in vivo accelerates diet-induced body weight gain and adipocyte enlargement. Mechanistically, SLC7A10 inhibition in human and murine adipocytes decreases adipocyte serine uptake and total glutathione levels and promotes reactive oxygen species (ROS) generation. Conversely, SLC7A10 overexpression decreases ROS generation and increases mitochondrial respiratory capacity. RNA sequencing revealed consistent changes in gene expression between human adipocytes and zebrafish visceral adipose tissue following loss of SLC7A10, e.g., upregulation of SCD (lipid storage) and downregulation of CPT1A (lipid oxidation). Interestingly, ROS scavenger reduced lipid accumulation and attenuated the lipid-storing effect of SLC7A10 inhibition. These data uncover adipocyte SLC7A10 as a novel important regulator of adipocyte resilience to nutrient and oxidative stress, in part by enhancing glutathione levels and mitochondrial respiration, conducive to decreased ROS generation, lipid accumulation, adipocyte hypertrophy, insulin resistance, and type 2 diabetes.
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Affiliation(s)
- Regine Å Jersin
- Mohn Nutrition Research Laboratory, Department of Clinical Science, University of Bergen, Bergen, Norway
- Hormone Laboratory, Haukeland University Hospital, Bergen, Norway
| | - Divya Sri Priyanka Tallapragada
- Mohn Nutrition Research Laboratory, Department of Clinical Science, University of Bergen, Bergen, Norway
- Hormone Laboratory, Haukeland University Hospital, Bergen, Norway
| | - André Madsen
- Mohn Nutrition Research Laboratory, Department of Clinical Science, University of Bergen, Bergen, Norway
- Hormone Laboratory, Haukeland University Hospital, Bergen, Norway
| | - Linn Skartveit
- Mohn Nutrition Research Laboratory, Department of Clinical Science, University of Bergen, Bergen, Norway
- Hormone Laboratory, Haukeland University Hospital, Bergen, Norway
| | - Even Fjære
- Institute of Marine Research, Bergen, Norway
| | | | - Laurence Lawrence-Archer
- Mohn Nutrition Research Laboratory, Department of Clinical Science, University of Bergen, Bergen, Norway
- Hormone Laboratory, Haukeland University Hospital, Bergen, Norway
| | - Aron Willems
- Mohn Nutrition Research Laboratory, Department of Clinical Science, University of Bergen, Bergen, Norway
- Hormone Laboratory, Haukeland University Hospital, Bergen, Norway
| | - Jan-Inge Bjune
- Mohn Nutrition Research Laboratory, Department of Clinical Science, University of Bergen, Bergen, Norway
- Hormone Laboratory, Haukeland University Hospital, Bergen, Norway
| | - Mona S Bjune
- Mohn Nutrition Research Laboratory, Department of Clinical Science, University of Bergen, Bergen, Norway
- Hormone Laboratory, Haukeland University Hospital, Bergen, Norway
| | - Villy Våge
- Hormone Laboratory, Haukeland University Hospital, Bergen, Norway
- Center of Health Research, Førde Hospital Trust, Førde, Norway
| | | | | | - Bjørn Gunnar Nedrebø
- Mohn Nutrition Research Laboratory, Department of Clinical Science, University of Bergen, Bergen, Norway
- Department of Medicine, Haugesund Hospital, Haugesund, Norway
| | | | - Vidar M Steen
- NORMENT, K.G. Jebsen Center for Psychosis Research, Department of Clinical Science, University of Bergen, Bergen, Norway
- Dr. E. Martens Research Group for Biological Psychiatry, Department of Medical Genetics, Haukeland University Hospital, Bergen, Norway
| | - Matthias Blüher
- Clinic for Endocrinology and Nephrology, Medical Research Center, Leipzig, Germany
| | - Peter Jacobson
- Institute of Medicine, The Sahlgrenska Academy at the University of Gothenburg, Gothenburg, Sweden
| | - Per-Arne Svensson
- Institute of Medicine, The Sahlgrenska Academy at the University of Gothenburg, Gothenburg, Sweden
| | - Johan Fernø
- Mohn Nutrition Research Laboratory, Department of Clinical Science, University of Bergen, Bergen, Norway
- Hormone Laboratory, Haukeland University Hospital, Bergen, Norway
| | - Mikael Rydén
- Department of Medicine (H7), Karolinska Institutet, Karolinska University Hospital, Huddinge, Stockholm, Sweden
| | - Peter Arner
- Department of Medicine (H7), Karolinska Institutet, Karolinska University Hospital, Huddinge, Stockholm, Sweden
| | - Ottar Nygård
- Mohn Nutrition Research Laboratory, Department of Clinical Science, University of Bergen, Bergen, Norway
- Department of Heart Disease, Haukeland University Hospital, Bergen, Norway
| | - Melina Claussnitzer
- Mohn Nutrition Research Laboratory, Department of Clinical Science, University of Bergen, Bergen, Norway
- Broad Institute of MIT and Harvard, Cambridge, MA
- Department of Medicine, Beth Israel Deaconess Medical Center, Harvard Medical School, Boston, MA
| | - Ståle Ellingsen
- Institute of Marine Research, Bergen, Norway
- Department of Biological Sciences, University of Bergen, Bergen, Norway
| | - Lise Madsen
- Institute of Marine Research, Bergen, Norway
- Department of Biology, University of Copenhagen, Copenhagen, Denmark
| | - Jørn V Sagen
- Mohn Nutrition Research Laboratory, Department of Clinical Science, University of Bergen, Bergen, Norway
- Hormone Laboratory, Haukeland University Hospital, Bergen, Norway
- Bergen Stem Cell Consortium, Haukeland University Hospital, Bergen, Norway
| | - Gunnar Mellgren
- Mohn Nutrition Research Laboratory, Department of Clinical Science, University of Bergen, Bergen, Norway
- Hormone Laboratory, Haukeland University Hospital, Bergen, Norway
| | - Simon N Dankel
- Mohn Nutrition Research Laboratory, Department of Clinical Science, University of Bergen, Bergen, Norway
- Hormone Laboratory, Haukeland University Hospital, Bergen, Norway
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Xi Y, Kong F, Chi Z. ROS Induce β-Carotene Biosynthesis Caused by Changes of Photosynthesis Efficiency and Energy Metabolism in Dunaliella salina Under Stress Conditions. Front Bioeng Biotechnol 2021; 8:613768. [PMID: 33520962 PMCID: PMC7844308 DOI: 10.3389/fbioe.2020.613768] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/03/2020] [Accepted: 11/25/2020] [Indexed: 11/13/2022] Open
Abstract
The unicellular alga Dunaliella salina is regarded as a promising cell factory for the commercial production of β-carotene due to its high yield of carotenoids. However, the underlying mechanism of β-carotene accumulation is still unclear. In this study, the regulatory mechanism of β-carotene accumulation in D. salina under stress conditions was investigated. Our results indicated that there is a significant positive correlation between the cellular ROS level and β-carotene content, and the maximum quantum efficiency (Fv/Fm) of PSII is negatively correlated with β-carotene content under stress conditions. The increase of ROS was found to be coupled with the inhibition of Fv/Fm of PSII in D. salina under stress conditions. Furthermore, transcriptomic analysis of the cells cultivated with H2O2 supplementation showed that the major differentially expressed genes involved in β-carotene metabolism were upregulated, whereas the genes involved in photosynthesis were downregulated. These results indicated that ROS induce β-carotene accumulation in D. salina through fine-tuning genes which were involved in photosynthesis and β-carotene biosynthesis. Our study provided a better understanding of the regulatory mechanism involved in β-carotene accumulation in D. salina, which might be useful for overaccumulation of carotenoids and other valuable compounds in other microalgae.
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Affiliation(s)
- Yimei Xi
- School of Bioengineering, Dalian University of Technology, Dalian, China
| | - Fantao Kong
- School of Bioengineering, Dalian University of Technology, Dalian, China
| | - Zhanyou Chi
- School of Bioengineering, Dalian University of Technology, Dalian, China
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Dong PT, Zong C, Dagher Z, Hui J, Li J, Zhan Y, Zhang M, Mansour MK, Cheng JX. Polarization-sensitive stimulated Raman scattering imaging resolves amphotericin B orientation in Candida membrane. SCIENCE ADVANCES 2021; 7:eabd5230. [PMID: 33523971 PMCID: PMC7787481 DOI: 10.1126/sciadv.abd5230] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/26/2020] [Accepted: 11/11/2020] [Indexed: 05/10/2023]
Abstract
Ergosterol-targeting amphotericin B (AmB) is the first line of defense for life-threatening fungal infections. Two models have been proposed to illustrate AmB assembly in the cell membrane; one is the classical ion channel model in which AmB vertically forms transmembrane tunnel and the other is a recently proposed sterol sponge model where AmB is laterally adsorbed onto the membrane surface. To address this controversy, we use polarization-sensitive stimulated Raman scattering from fingerprint C═C stretching vibration to visualize AmB, ergosterol, and lipid in single fungal cells. Intracellular lipid droplet accumulation in response to AmB treatment is found. AmB is located in membrane and intracellular droplets. In the 16 strains studied, AmB residing inside cell membrane was highly ordered, and its orientation is primarily parallel to phospholipid acyl chains, supporting the ion channel model. Label-free imaging of AmB and chemical contents offers an analytical platform for developing low-toxicity, resistance-refractory antifungal agents.
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Affiliation(s)
- Pu-Ting Dong
- Department of Biomedical Engineering, Boston University, Boston, MA 02215, USA
- Photonics Center, Boston University, Boston, MA 02215, USA
| | - Cheng Zong
- Department of Biomedical Engineering, Boston University, Boston, MA 02215, USA
- Photonics Center, Boston University, Boston, MA 02215, USA
| | - Zeina Dagher
- Division of Infectious Diseases, Massachusetts General Hospital, Boston, MA 02114, USA
- Harvard Medical School, Boston, MA 02115, USA
| | - Jie Hui
- Department of Biomedical Engineering, Boston University, Boston, MA 02215, USA
- Photonics Center, Boston University, Boston, MA 02215, USA
| | - Junjie Li
- Department of Biomedical Engineering, Boston University, Boston, MA 02215, USA
- Photonics Center, Boston University, Boston, MA 02215, USA
| | - Yuewei Zhan
- Department of Biomedical Engineering, Boston University, Boston, MA 02215, USA
- Photonics Center, Boston University, Boston, MA 02215, USA
| | - Meng Zhang
- Department of Biomedical Engineering, Boston University, Boston, MA 02215, USA
- Photonics Center, Boston University, Boston, MA 02215, USA
| | - Michael K Mansour
- Division of Infectious Diseases, Massachusetts General Hospital, Boston, MA 02114, USA
- Harvard Medical School, Boston, MA 02115, USA
| | - Ji-Xin Cheng
- Department of Biomedical Engineering, Boston University, Boston, MA 02215, USA.
- Photonics Center, Boston University, Boston, MA 02215, USA
- Department of Electrical and Computer Engineering, Boston University, Boston, MA 02215, USA
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64
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Ramalingam V, Rajaram R. A paradoxical role of reactive oxygen species in cancer signaling pathway: Physiology and pathology. Process Biochem 2021. [DOI: 10.1016/j.procbio.2020.09.032] [Citation(s) in RCA: 17] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
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65
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Chouhan N, Devadasu E, Yadav RM, Subramanyam R. Autophagy Induced Accumulation of Lipids in pgrl1 and pgr5 of Chlamydomonas reinhardtii Under High Light. FRONTIERS IN PLANT SCIENCE 2021; 12:752634. [PMID: 35145528 PMCID: PMC8821104 DOI: 10.3389/fpls.2021.752634] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/03/2021] [Accepted: 12/20/2021] [Indexed: 05/03/2023]
Abstract
Chlamydomonas (C.) reinhardtii is a potential microalga for lipid production. Autophagy-triggered lipid metabolism in microalgae has not being studied so far from a mutant of proton gradient regulation 1 like (PGRL1) and proton gradient regulation 5 (PGR5). In this study, C. reinhardtii cells (wild-type CC124 and cyclic electron transport dependant mutants pgrl1 and pgr5) were grown photoheterotrophically in high light 500 μmol photons m-2 s-1, where pgr5 growth was retarded due to an increase in reactive oxygen species (ROS). The lipid contents were increased; however, carbohydrate content was decreased in pgr5. Further, the Nile Red (NR) fluorescence shows many lipid bodies in pgr5 cells under high light. Similarly, the electron micrographs show that large vacuoles were formed in high light stress despite the grana stacks structure. We also observed increased production of reactive oxygen species, which could be one reason the cells underwent autophagy. Further, a significant increase of autophagy ATG8 and detections of ATG8-PE protein was noticed in pgr5, a hallmark characteristic for autophagy formation. Consequently, the triacylglycerol (TAG) content was increased due to diacylglycerol acyltransferases (DGAT) and phospholipid diacylglycerol acyl-transference (PDAT) enzymes' expression, especially in pgr5. Here the TAG synthesis would have been obtained from degraded membrane lipids in pgr5. Additionally, mono, polyunsaturated, and saturated fatty acids were identified more in the high light condition. Our study shows that the increased light induces the reactive oxygen species, which leads to autophagy and TAG accumulation. Therefore, the enhanced accumulation of TAGs can be used as feedstock for biodiesel production and aqua feed.
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66
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Perdigão Cota de Almeida S, Rozas EE, Oller do Nascimento CA, Dias M, Mendes MA. Metabolomic and secretomic approach to the resistance features of the fungus Aspergillus niger IOC 4687 to copper stress. Metallomics 2020; 13:6050762. [PMID: 33570139 DOI: 10.1093/mtomcs/mfaa010] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/10/2020] [Revised: 12/04/2020] [Accepted: 12/23/2020] [Indexed: 11/14/2022]
Abstract
Metabolomic and secretomic analyses of Aspergillus niger IOC 4687 indicated the features of resistance of this strain to copper stress. To investigate the metabolites produced under oxidative stress conditions, gas chromatography-mass spectrometry analysis was performed. The secretome principal component analysis results showed that mannitol could be the main metabolite responsible for conferring resistance to the fungus, and gluconic acid is the possible cause of copper desorption because of its chelating ability. The meta-analysis of the metabolome of A. niger IOC 4687 indicated that a low concentration of sorbitol and ribonolactone during growth may be an indicator of oxidative stress.
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Affiliation(s)
- Silas Perdigão Cota de Almeida
- Dempster MS Lab, Chemical Engineering Department of Polytechnic School of University of São Paulo, Rua do Lago 250, Bloco B 3 andar, 05508-080 São Paulo-SP, Brasil
| | - Enrique Eduardo Rozas
- Dempster MS Lab, Chemical Engineering Department of Polytechnic School of University of São Paulo, Rua do Lago 250, Bloco B 3 andar, 05508-080 São Paulo-SP, Brasil
| | - Cláudio Augusto Oller do Nascimento
- Dempster MS Lab, Chemical Engineering Department of Polytechnic School of University of São Paulo, Rua do Lago 250, Bloco B 3 andar, 05508-080 São Paulo-SP, Brasil
| | - Meriellen Dias
- Dempster MS Lab, Chemical Engineering Department of Polytechnic School of University of São Paulo, Rua do Lago 250, Bloco B 3 andar, 05508-080 São Paulo-SP, Brasil
| | - Maria Anita Mendes
- Dempster MS Lab, Chemical Engineering Department of Polytechnic School of University of São Paulo, Rua do Lago 250, Bloco B 3 andar, 05508-080 São Paulo-SP, Brasil
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67
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Sijil PV, Adki VR, Sarada R, Chauhan VS. Stress induced modifications in photosystem II electron transport, oxidative status, and expression pattern of acc D and rbc L genes in an oleaginous microalga Desmodesmus sp. BIORESOURCE TECHNOLOGY 2020; 318:124039. [PMID: 32896711 DOI: 10.1016/j.biortech.2020.124039] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/29/2020] [Revised: 08/17/2020] [Accepted: 08/18/2020] [Indexed: 06/11/2023]
Abstract
The study aimed at understanding the biochemical and molecular level modifications in Desmodesmus sp. under lipid inducing stress conditions. The low-temperature (5 °C) incubation and nitrogen starvation reduced the PS II electron transport in microalga with a maximum reduction of 50-57% in ET0/ABS values. The PS II electron transport recovered in UV treated cultures after an initial reduction of 87-93% in ET0/ABS values. A 2.7-4.4 fold increase in ROS and MDA levels was observed under low-temperature incubation, and nitrogen starvation. The UV treatment caused 1.3-2.4 fold higher ROS and MDA levels than control. The low-temperature incubated, nitrogen starved, and UV treated cultures showed 2.4-4 fold higher acc D gene expression. A higher rbc L gene expression was observed under low-temperature stress. The study showed modifications in PS II electron transport, oxidative status, and expression of acc D and rbc L genes under stress conditions.
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Affiliation(s)
- P V Sijil
- Plant Cell Biotechnology (PCBT) Department, CSIR-Central Food Technological Research Institute (CFTRI), Mysuru 570 020, India; Academy of Scientific and Innovative Research (AcSIR), Ghaziabad 201 002, India
| | - Vinaya R Adki
- Plant Cell Biotechnology (PCBT) Department, CSIR-Central Food Technological Research Institute (CFTRI), Mysuru 570 020, India
| | - R Sarada
- Plant Cell Biotechnology (PCBT) Department, CSIR-Central Food Technological Research Institute (CFTRI), Mysuru 570 020, India; Academy of Scientific and Innovative Research (AcSIR), Ghaziabad 201 002, India
| | - V S Chauhan
- Plant Cell Biotechnology (PCBT) Department, CSIR-Central Food Technological Research Institute (CFTRI), Mysuru 570 020, India; Academy of Scientific and Innovative Research (AcSIR), Ghaziabad 201 002, India.
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68
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González J, Romero-Aguilar L, Matus-Ortega G, Pablo Pardo J, Flores-Alanis A, Segal-Kischinevzky C. Levaduras adaptadas al frío: el tesoro biotecnológico de la Antártica. TIP REVISTA ESPECIALIZADA EN CIENCIAS QUÍMICO-BIOLÓGICAS 2020. [DOI: 10.22201/fesz.23958723e.2020.0.267] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022] Open
Abstract
Las levaduras son organismos microscópicos que están distribuidos en toda la Tierra, de modo que algunas han adaptado su metabolismo para proliferar en ambientes extremos. Las levaduras que habitan en la Antártica son un grupo de microorganismos adaptados al frío que han sido poco estudiadas. En esta revisión se describen algunas de las adaptaciones metabólicas que les permiten habitar en ambientes extremos, por ejemplo, el de la Antártica. También se abordan las consideraciones relevantes para saber si una levadura es extremófila, así como los criterios utilizados para clasificar a las levaduras por crecimiento y temperatura. Además, se explica el papel de las vías de biosíntesis de carotenoides y lípidos que están involucradas en contrarrestar a las especies reactivas de oxígeno generadas por estrés oxidante en levaduras pigmentadas y oleaginosas del género Rhodotorula. La revisión también considera aspectos de investigación básica y la importancia de las levaduras oleaginosas de la Antártica para el desarrollo de algunas aplicaciones biotecnológicas.
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69
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Lignocellulosic Biomass as a Substrate for Oleaginous Microorganisms: A Review. APPLIED SCIENCES-BASEL 2020. [DOI: 10.3390/app10217698] [Citation(s) in RCA: 25] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
Abstract
Microorganisms capable of accumulating lipids in high percentages, known as oleaginous microorganisms, have been widely studied as an alternative for producing oleochemicals and biofuels. Microbial lipid, so-called Single Cell Oil (SCO), production depends on several growth parameters, including the nature of the carbon substrate, which must be efficiently taken up and converted into storage lipid. On the other hand, substrates considered for large scale applications must be abundant and of low acquisition cost. Among others, lignocellulosic biomass is a promising renewable substrate containing high percentages of assimilable sugars (hexoses and pentoses). However, it is also highly recalcitrant, and therefore it requires specific pretreatments in order to release its assimilable components. The main drawback of lignocellulose pretreatment is the generation of several by-products that can inhibit the microbial metabolism. In this review, we discuss the main aspects related to the cultivation of oleaginous microorganisms using lignocellulosic biomass as substrate, hoping to contribute to the development of a sustainable process for SCO production in the near future.
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70
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Lu H, Chen H, Tang X, Yang Q, Zhang H, Chen YQ, Chen W. Metabolomics analysis reveals the role of oxygen control in the nitrogen limitation induced lipid accumulation in Mortierella alpina. J Biotechnol 2020; 325:325-333. [PMID: 33039549 DOI: 10.1016/j.jbiotec.2020.10.004] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/26/2020] [Revised: 10/05/2020] [Accepted: 10/06/2020] [Indexed: 02/06/2023]
Abstract
Lipid hyperaccumulation in oleaginous microorganisms is generally induced by nitrogen limitation, while oxygen supply can influence biomass growth and cell metabolism. Although strategies based on nitrogen limitation or oxygen control have been extensively explored and applied in various oleaginous microorganisms, the role of oxygen supply in nitrogen limitation induced lipid hyperaccumulation still remains unclear. Here, we systematically surveyed the effects of oxygen supply on the oleaginous fungus M. alpina cultured in nitrogen limited conditions through integration of physiochemical parameters and metabolomics analysis. Our results indicated that a high oxygen supply promoted carbon/nitrogen consumption and was used for rapid biomass synthesis, while either high or low oxygen supply conditions were adverse to lipid and ARA accumulation. Different oxygen supply level significantly affected the balance between fermentation for lipid synthesis and respiration for energy generation. Under nitrogen limitation, a suitable oxygen supply promoted the recycling of preformed nitrogen and increased the redirection of carbon towards fatty acid synthesis through the hub centred around glutamic acid coupled to the intermediate metabolism of carbon in the TCA cycle, while a high oxygen supply favored the respiration process and enhanced the degradation of LC-PUFAs, rather than fermentation for fatty acid synthesis. This system-level insight reveals the underlying metabolic mechanism of oxygen control in nitrogen limitation induced lipid accumulation, and provides theoretical support for the integration of oxygen control with nutrient supply for efficient microbial oil production.
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Affiliation(s)
- Hengqian Lu
- State Key Laboratory of Food Science and Technology, Jiangnan University, Wuxi, Jiangsu 214122, China; School of Food Science and Technology, Jiangnan University, Wuxi, Jiangsu 214122, China
| | - Haiqin Chen
- State Key Laboratory of Food Science and Technology, Jiangnan University, Wuxi, Jiangsu 214122, China; School of Food Science and Technology, Jiangnan University, Wuxi, Jiangsu 214122, China; National Engineering Research Center for Functional Food, Jiangnan University, Wuxi, Jiangsu 214122, China; (Yangzhou) Institute of Food Biotechnology, Jiangnan University, Yangzhou 225004, China.
| | - Xin Tang
- State Key Laboratory of Food Science and Technology, Jiangnan University, Wuxi, Jiangsu 214122, China; School of Food Science and Technology, Jiangnan University, Wuxi, Jiangsu 214122, China
| | - Qin Yang
- State Key Laboratory of Food Science and Technology, Jiangnan University, Wuxi, Jiangsu 214122, China; School of Food Science and Technology, Jiangnan University, Wuxi, Jiangsu 214122, China
| | - Hao Zhang
- State Key Laboratory of Food Science and Technology, Jiangnan University, Wuxi, Jiangsu 214122, China; School of Food Science and Technology, Jiangnan University, Wuxi, Jiangsu 214122, China; (Yangzhou) Institute of Food Biotechnology, Jiangnan University, Yangzhou 225004, China
| | - Yong Q Chen
- State Key Laboratory of Food Science and Technology, Jiangnan University, Wuxi, Jiangsu 214122, China; School of Food Science and Technology, Jiangnan University, Wuxi, Jiangsu 214122, China; National Engineering Research Center for Functional Food, Jiangnan University, Wuxi, Jiangsu 214122, China
| | - Wei Chen
- State Key Laboratory of Food Science and Technology, Jiangnan University, Wuxi, Jiangsu 214122, China; School of Food Science and Technology, Jiangnan University, Wuxi, Jiangsu 214122, China; National Engineering Research Center for Functional Food, Jiangnan University, Wuxi, Jiangsu 214122, China; Beijing Innovation Centre of Food Nutrition and Human Health, Beijing Technology and Business University (BTBU), Beijing 100048, China
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71
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Wang J, Ledesma-Amaro R, Wei Y, Ji B, Ji XJ. Metabolic engineering for increased lipid accumulation in Yarrowia lipolytica - A Review. BIORESOURCE TECHNOLOGY 2020; 313:123707. [PMID: 32595069 DOI: 10.1016/j.biortech.2020.123707] [Citation(s) in RCA: 95] [Impact Index Per Article: 23.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/14/2020] [Revised: 06/15/2020] [Accepted: 06/16/2020] [Indexed: 06/11/2023]
Abstract
Current energy security and climate change policies encourage the development and utilization of bioenergy. Oleaginous yeasts provide a particularly attractive platform for the sustainable production of biofuels and industrial chemicals due to their ability to accumulate high amounts of lipids. In particular, microbial lipids in the form of triacylglycerides (TAGs) produced from renewable feedstocks have attracted considerable attention because they can be directly used in the production of biodiesel and oleochemicals analogous to petrochemicals. As an oleaginous yeast that is generally regarded as safe, Yarrowia lipolytica has been extensively studied, with large amounts of data on its lipid metabolism, genetic tools, and genome sequencing and annotation. In this review, we highlight the newest strategies for increasing lipid accumulation using metabolic engineering and summarize the research advances on the overaccumulation of lipids in Y. lipolytica. Finally, perspectives for future engineering approaches are proposed.
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Affiliation(s)
- Jinpeng Wang
- College of Biotechnology and Pharmaceutical Engineering, Nanjing Tech University, No. 30 South Puzhu Road, Nanjing 211816, People's Republic of China
| | - Rodrigo Ledesma-Amaro
- Department of Bioengineering and Imperial College Centre for Synthetic Biology, Imperial College London, London SW7 2AZ, UK
| | - Yongjun Wei
- School of Pharmaceutical Sciences, Key Laboratory of State Ministry of Education, Key Laboratory of Henan Province for Drug Quality Control and Evaluation, Collaborative Innovation Center of New Drug Research and Safety Evaluation, Zhengzhou University, 100 Kexue Avenue, Zhengzhou 450001, People's Republic of China
| | - Boyang Ji
- Department of Biology and Biological Engineering, Chalmers University of Technology, SE-412 96 Gothenburg, Sweden; Novo Nordisk Foundation Center for Biosustainability, Technical University of Denmark, DK-2800 Kgs. Lyngby, Denmark
| | - Xiao-Jun Ji
- College of Biotechnology and Pharmaceutical Engineering, Nanjing Tech University, No. 30 South Puzhu Road, Nanjing 211816, People's Republic of China.
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72
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Kothri M, Mavrommati M, Elazzazy AM, Baeshen MN, Moussa TAA, Aggelis G. Microbial sources of polyunsaturated fatty acids (PUFAs) and the prospect of organic residues and wastes as growth media for PUFA-producing microorganisms. FEMS Microbiol Lett 2020; 367:5735438. [PMID: 32053204 DOI: 10.1093/femsle/fnaa028] [Citation(s) in RCA: 43] [Impact Index Per Article: 10.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/03/2019] [Accepted: 02/11/2020] [Indexed: 12/17/2022] Open
Abstract
The discovery of non-fish sources of polyunsaturated fatty acids (PUFAs) is of great biotechnological importance. Although various oleaginous microalgae and fungi are able of accumulating storage lipids (single cell oils - SCOs) containing PUFAs, the industrial applications utilizing these organisms are rather limited due to the high-fermentation cost. However, combining SCO production with other biotechnological applications, including waste and by-product valorization, can overcome this difficulty. In the current review, we present the major sources of fungi (i.e. members of Mucoromycota, fungoid-like Thraustochytrids and genetically modified strains of Yarrowia lipolytica) and microalgae (e.g. Isochrysis, NannochloropsisandTetraselmis) that have come recently to the forefront due to their ability to produce PUFAs. Approaches adopted in order to increase PUFA productivity and the potential of using various residues, such as agro-industrial, food and aquaculture wastes as fermentation substrates for SCO production have been considered and discussed. We concluded that several organic residues can be utilized as feedstock in the SCO production increasing the competitiveness of oleaginous organisms against conventional PUFA producers.
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Affiliation(s)
- Maria Kothri
- Unit of Microbiology, Division of Genetics, Cell and Developmental Biology, Department of Biology, University of Patras, 26504 Patras, Greece
| | - Maria Mavrommati
- Unit of Microbiology, Division of Genetics, Cell and Developmental Biology, Department of Biology, University of Patras, 26504 Patras, Greece
| | - Ahmed M Elazzazy
- Department of Biology, Faculty of Science, University of Jeddah, 23218 Jeddah, Saudi Arabi.,Department of Chemistry of Natural and Microbial Products, Division of Pharmaceutical and Drug Industries, National Research Centre, 12622 Dokki, Giza, Egypt
| | - Mohamed N Baeshen
- Department of Biology, Faculty of Science, University of Jeddah, 23218 Jeddah, Saudi Arabi
| | - Tarek A A Moussa
- Department of Biology, Faculty of Science, University of Jeddah, 23218 Jeddah, Saudi Arabi.,Botany and Microbiology Department, Faculty of Science, Cairo University, 12613 Giza, Egypt
| | - George Aggelis
- Unit of Microbiology, Division of Genetics, Cell and Developmental Biology, Department of Biology, University of Patras, 26504 Patras, Greece.,Department of Biology, Faculty of Science, University of Jeddah, 23218 Jeddah, Saudi Arabi
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73
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Lv M, Wang F, Zeng L, Bi Y, Cui J, Liu L, Bi Y, Chen L, Zhang W. Identification and metabolomic analysis of a starch-deficient Crypthecodinium cohnii mutant reveals multiple mechanisms relevant to enhanced growth and lipid accumulation. ALGAL RES 2020. [DOI: 10.1016/j.algal.2020.102001] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/07/2023]
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74
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Pinheiro MJ, Bonturi N, Belouah I, Miranda EA, Lahtvee PJ. Xylose Metabolism and the Effect of Oxidative Stress on Lipid and Carotenoid Production in Rhodotorula toruloides: Insights for Future Biorefinery. Front Bioeng Biotechnol 2020; 8:1008. [PMID: 32974324 PMCID: PMC7466555 DOI: 10.3389/fbioe.2020.01008] [Citation(s) in RCA: 29] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/02/2020] [Accepted: 07/31/2020] [Indexed: 12/04/2022] Open
Abstract
The use of cell factories to convert sugars from lignocellulosic biomass into chemicals in which oleochemicals and food additives, such as carotenoids, is essential for the shift toward sustainable processes. Rhodotorula toruloides is a yeast that naturally metabolises a wide range of substrates, including lignocellulosic hydrolysates, and converts them into lipids and carotenoids. In this study, xylose, the main component of hemicellulose, was used as the sole substrate for R. toruloides, and a detailed physiology characterisation combined with absolute proteomics and genome-scale metabolic models was carried out to understand the regulation of lipid and carotenoid production. To improve these productions, oxidative stress was induced by hydrogen peroxide and light irradiation and further enhanced by adaptive laboratory evolution. Based on the online measurements of growth and CO2 excretion, three distinct growth phases were identified during batch cultivations. Majority of the intracellular flux estimations showed similar trends with the measured protein levels and demonstrated improved NADPH regeneration, phosphoketolase activity and reduced β-oxidation, correlating with increasing lipid yields. Light irradiation resulted in 70% higher carotenoid and 40% higher lipid content compared to the optimal growth conditions. The presence of hydrogen peroxide did not affect the carotenoid production but culminated in the highest lipid content of 0.65 g/gDCW. The adapted strain showed improved fitness and 2.3-fold higher carotenoid content than the parental strain. This work presents a holistic view of xylose conversion into microbial oil and carotenoids by R. toruloides, in a process toward renewable and cost-effective production of these molecules.
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Affiliation(s)
- Marina Julio Pinheiro
- Institute of Technology, University of Tartu, Tartu, Estonia
- Department of Materials and Bioprocess Engineering, School of Chemical Engineering, University of Campinas, Campinas, Brazil
| | | | - Isma Belouah
- Institute of Technology, University of Tartu, Tartu, Estonia
| | - Everson Alves Miranda
- Department of Materials and Bioprocess Engineering, School of Chemical Engineering, University of Campinas, Campinas, Brazil
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75
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Genetic Impairment of Cellulose Biosynthesis Increases Cell Wall Fragility and Improves Lipid Extractability from Oleaginous Alga Nannochloropsis salina. Microorganisms 2020; 8:microorganisms8081195. [PMID: 32781613 PMCID: PMC7464416 DOI: 10.3390/microorganisms8081195] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/03/2020] [Revised: 07/31/2020] [Accepted: 08/05/2020] [Indexed: 01/03/2023] Open
Abstract
In microalgae, photosynthesis provides energy and sugar phosphates for the biosynthesis of storage and structural carbohydrates, lipids, and nitrogenous proteins. The oleaginous alga Nannochloropsis salina does not preferentially partition photoassimilates among cellulose, chrysolaminarin, and lipids in response to nitrogenous nutrient deprivation. In the present study, we investigated whether genetic impairment of the cellulose synthase gene (CesA) expression would lead to protein accumulation without the accumulation of storage C polymers in N. salina. Three cesA mutants were generated by the CRISPR/Cas9 approach. Cell wall thickness and cellulose content were reduced in the cesA1 mutant, but not in cesA2 or cesA4 cells. CesA1 mutation resulted in a reduction of chrysolaminarin and neutral lipid contents, by 66.3% and 37.1%, respectively, but increased the soluble protein content by 1.8-fold. Further, N. salina cells with a thinned cell wall were susceptible to mechanical stress, resulting in a 1.7-fold enhancement of lipid extractability. Taken together, the previous and current studies strongly suggest the presence of a controlling mechanism that regulates photoassimilate partitioning toward C and N metabolic pathways as well as the cellulose metabolism as a potential target for cost-effective microalgal cell disruption and as a useful protein production platform.
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76
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Sundararaghavan A, Mukherjee A, Suraishkumar GK. Investigating the potential use of an oleaginous bacterium, Rhodococcus opacus PD630, for nano-TiO 2 remediation. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2020; 27:27394-27406. [PMID: 31493086 DOI: 10.1007/s11356-019-06388-0] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/24/2019] [Accepted: 08/30/2019] [Indexed: 06/10/2023]
Abstract
The occurrence of titanium dioxide nanoparticles (nTiO2), in the effluents released from wastewater treatment plants, has raised concerns. The fate of nTiO2 and their potential impact on organisms from different ecosystems are widely investigated. For the first time, in this work, we report the responses of an oleaginous bacteria Rhodococcus opacus PD630, belonging to an ecologically important genus Rhodococcus to environmentally relevant concentrations of nTiO2, under dark and UV light conditions. We observed a dose-dependent increase in nTiO2 uptake by the bacteria that reached a maximum of 1.4 mg nTiO2 (g cell)-1 under mid-log UV exposure, corresponding to 97% uptake. The nTiO2 induced oxidative stress in bacteria that increased from 25.1 to a maximum of 100.3, 44.1, and 51.7 μmol .OH (g cell)-1 under dark, continuous, and mid-log UV, respectively. However, nTiO2 did not affect bacterial viability. Further, due to oxidative stress, the triacylglycerol (biodiesel) content from bacteria increased from 30% to a maximum of 54% CDW. Based on our findings, we propose an application of R. opacus PD 630 in nTiO2 remediation due to their high nTiO2 uptake and resistance.
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Affiliation(s)
- Archanaa Sundararaghavan
- Department of Biotechnology, Bhupat and Jyoti Mehta School of Biosciences building, Indian Institute of Technology Madras, Chennai, 600036, India
| | - Amitava Mukherjee
- Centre for Nanobiotechnology, VIT University, Vellore, 632014, India
| | - Gadi K Suraishkumar
- Department of Biotechnology, Bhupat and Jyoti Mehta School of Biosciences building, Indian Institute of Technology Madras, Chennai, 600036, India.
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Shi TQ, Wang LR, Zhang ZX, Sun XM, Huang H. Stresses as First-Line Tools for Enhancing Lipid and Carotenoid Production in Microalgae. Front Bioeng Biotechnol 2020; 8:610. [PMID: 32850686 PMCID: PMC7396513 DOI: 10.3389/fbioe.2020.00610] [Citation(s) in RCA: 39] [Impact Index Per Article: 9.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/23/2020] [Accepted: 05/18/2020] [Indexed: 12/30/2022] Open
Abstract
Microalgae can produce high-value-added products such as lipids and carotenoids using light or sugars, and their biosynthesis mechanism can be triggered by various stress conditions. Under nutrient deprivation or environmental stresses, microalgal cells accumulate lipids as an energy-rich carbon storage battery and generate additional amounts of carotenoids to alleviate the oxidative damage induced by stress conditions. Though stressful conditions are unfavorable for biomass accumulation and can induce oxidative damage, stress-based strategies are widely used in this field due to their effectiveness and economy. For the overproduction of different target products, it is required and meaningful to deeply understand the effects and mechanisms of various stress conditions so as to provide guidance on choosing the appropriate stress conditions. Moreover, the underlying molecular mechanisms under stress conditions can be clarified by omics technologies, which exhibit enormous potential in guiding rational genetic engineering for improving lipid and carotenoid biosynthesis.
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Affiliation(s)
- Tian-Qiong Shi
- School of Food Science and Pharmaceutical Engineering, Nanjing Normal University, Nanjing, China
| | - Ling-Ru Wang
- School of Food Science and Pharmaceutical Engineering, Nanjing Normal University, Nanjing, China
| | - Zi-Xu Zhang
- School of Food Science and Pharmaceutical Engineering, Nanjing Normal University, Nanjing, China
| | - Xiao-Man Sun
- School of Food Science and Pharmaceutical Engineering, Nanjing Normal University, Nanjing, China
| | - He Huang
- School of Food Science and Pharmaceutical Engineering, Nanjing Normal University, Nanjing, China
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78
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Cui J, Yu C, Zhong DB, Zhao Y, Yu X. Melatonin and calcium act synergistically to enhance the coproduction of astaxanthin and lipids in Haematococcus pluvialis under nitrogen deficiency and high light conditions. BIORESOURCE TECHNOLOGY 2020; 305:123069. [PMID: 32114308 DOI: 10.1016/j.biortech.2020.123069] [Citation(s) in RCA: 38] [Impact Index Per Article: 9.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/11/2020] [Revised: 02/18/2020] [Accepted: 02/19/2020] [Indexed: 05/20/2023]
Abstract
This study focused on the influence of integrating melatonin (MT) and calcium (Ca2+) on the simultaneous accumulation of astaxanthin and lipids in Haematococcus pluvialis under abiotic stress conditions. Compared with the control condition, MT induction enhanced astaxanthin and lipid contents by 65.89% and 27.38%, respectively. The highest contents of astaxanthin and lipids under combined exposure to MT and Ca2+ were 3.8% and 49.53%, respectively, which were 1.13- and 1.21-fold higher than those of cells treated with MT alone. The application of MT and Ca2+ also promoted the expression of carotenogenic and lipogenic genes and increased the levels of Ca2+ and γ-aminobutyric acid (GABA) but decreased reactive oxygen species (ROS) levels. Further evidence indicated that the increased cellular Ca2+ could promote astaxanthin biosynthesis under MT induction by regulating carotenogenic gene levels and GABA and ROS signalling. The integrated strategy efficiently improved the coproduction of astaxanthin and lipids in H. pluvialis.
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Affiliation(s)
- Jing Cui
- Faculty of Life Science and Technology, Kunming University of Science and Technology, Kunming 650500, China
| | - Chunli Yu
- Faculty of Life Science and Technology, Kunming University of Science and Technology, Kunming 650500, China
| | - Du-Bo Zhong
- Yunnan Yunce Quality Testing Co., Ltd, Kunming 650217, China
| | - Yongteng Zhao
- Faculty of Life Science and Technology, Kunming University of Science and Technology, Kunming 650500, China
| | - Xuya Yu
- Faculty of Life Science and Technology, Kunming University of Science and Technology, Kunming 650500, China.
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79
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Song X, Zhao Y, Han B, Li T, Zhao P, Xu JW, Yu X. Strigolactone mediates jasmonic acid-induced lipid production in microalga Monoraphidium sp. QLY-1 under nitrogen deficiency conditions. BIORESOURCE TECHNOLOGY 2020; 306:123107. [PMID: 32172089 DOI: 10.1016/j.biortech.2020.123107] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/29/2020] [Revised: 02/26/2020] [Accepted: 02/27/2020] [Indexed: 06/10/2023]
Abstract
The roles of jasmonic acid (JA) in the regulation of cell growth and lipid biosynthesis under the combination of strigolactone (SL) treatment and nitrogen deficiency (ND) were investigated. In this work, the optimised ND condition (46.18%) and ND combined with SL treatment (53.71%) showed 1.11- and 1.29-fold increases in lipid content in Monoraphidium sp. QLY-1 compared with the control condition (41.57%). The levels of JA, glutathione (GSH), and γ-aminobutyric acid (GABA) and lipogenic genes expression were upregulated by the combination of SL and ND, but the ROS level was decreased. Furthermore, exogenous JA supplementation induced the highest lipid content (57.12%) and productivity (312.35 mg L-1 d-1) under ND combined with SL treatment. This study provided a combined strategy for enhancing lipid production and supplied novel insights into the role of JA signalling in regulating lipid synthesis and oxidative stress in microalgae by combining SL treatment with ND.
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Affiliation(s)
- Xueting Song
- Faculty of Life Science and Technology, Kunming University of Science and Technology, Kunming 650500, China
| | - Yongteng Zhao
- Faculty of Life Science and Technology, Kunming University of Science and Technology, Kunming 650500, China
| | - Benyong Han
- Faculty of Life Science and Technology, Kunming University of Science and Technology, Kunming 650500, China
| | - Tao Li
- Faculty of Life Science and Technology, Kunming University of Science and Technology, Kunming 650500, China
| | - Peng Zhao
- Faculty of Life Science and Technology, Kunming University of Science and Technology, Kunming 650500, China
| | - Jun-Wei Xu
- Faculty of Life Science and Technology, Kunming University of Science and Technology, Kunming 650500, China
| | - Xuya Yu
- Faculty of Life Science and Technology, Kunming University of Science and Technology, Kunming 650500, China.
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80
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Premkumar J, Sampath P, Sanjay R, Chandrakala A, Rajagopal D. Synthetic Guaiacol Derivatives as Promising Myeloperoxidase Inhibitors Targeting Atherosclerotic Cardiovascular Disease. ChemMedChem 2020; 15:1187-1199. [DOI: 10.1002/cmdc.202000084] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/11/2020] [Revised: 05/03/2020] [Indexed: 12/17/2022]
Affiliation(s)
- Jayaraj Premkumar
- Department of ChemistrySchool of Advanced ScienceVellore Institute of Technology-Vellore Tamilnadu 632014 India
| | - Parthasarathy Sampath
- Burnett School of Biomedical SciencesCollege of MedicineUniversity of Central Florida Orlando FL 32832 USA
| | - Rajagopalan Sanjay
- Division of Cardiovascular MedicineHarrington Heart and Vascular Institute Cleveland 44106 Ohio USA
- Cardiovascular Research InstituteSchool of MedicineCase Western Reserve University Cleveland Ohio 44106 USA
| | - Aluganti Chandrakala
- Burnett School of Biomedical SciencesCollege of MedicineUniversity of Central Florida Orlando FL 32832 USA
| | - Desikan Rajagopal
- Department of ChemistrySchool of Advanced ScienceVellore Institute of Technology-Vellore Tamilnadu 632014 India
- Burnett School of Biomedical SciencesCollege of MedicineUniversity of Central Florida Orlando FL 32832 USA
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81
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Sundararaghavan A, Mukherjee A, Sahoo S, Suraishkumar GK. Mechanism of the oxidative stress‐mediated increase in lipid accumulation by the bacterium,R. opacusPD630: Experimental analysis and genome‐scale metabolic modeling. Biotechnol Bioeng 2020; 117:1779-1788. [DOI: 10.1002/bit.27330] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/06/2019] [Revised: 02/22/2020] [Accepted: 03/09/2020] [Indexed: 12/13/2022]
Affiliation(s)
- Archanaa Sundararaghavan
- Department of Biotechnology, Bhupat and Jyoti Mehta School of Biosciences buildingIndian Institute of Technology Madras Chennai India
| | | | - Swagatika Sahoo
- Department of Chemical Engineering and Initiative for Biological Systems EngineeringIndian Institute of Technology Madras Chennai India
| | - G. K. Suraishkumar
- Department of Biotechnology, Bhupat and Jyoti Mehta School of Biosciences buildingIndian Institute of Technology Madras Chennai India
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Venkatesh D, O'Brien NA, Zandkarimi F, Tong DR, Stokes ME, Dunn DE, Kengmana ES, Aron AT, Klein AM, Csuka JM, Moon SH, Conrad M, Chang CJ, Lo DC, D'Alessandro A, Prives C, Stockwell BR. MDM2 and MDMX promote ferroptosis by PPARα-mediated lipid remodeling. Genes Dev 2020; 34:526-543. [PMID: 32079652 PMCID: PMC7111265 DOI: 10.1101/gad.334219.119] [Citation(s) in RCA: 159] [Impact Index Per Article: 39.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/25/2019] [Accepted: 01/21/2020] [Indexed: 12/21/2022]
Abstract
Here, Venkatesh et al. investigated the p53-independent roles of MDMX and the MDM2–MDMX complex. They found that MDM2 and MDMX facilitate ferroptosis in cells with or without p53, and that PPARα activity is essential for MDM2 and MDMX to promote ferroptosis, suggesting that the MDM2–MDMX complex regulates lipids through altering PPARα activity. MDM2 and MDMX, negative regulators of the tumor suppressor p53, can work separately and as a heteromeric complex to restrain p53's functions. MDM2 also has pro-oncogenic roles in cells, tissues, and animals that are independent of p53. There is less information available about p53-independent roles of MDMX or the MDM2–MDMX complex. We found that MDM2 and MDMX facilitate ferroptosis in cells with or without p53. Using small molecules, RNA interference reagents, and mutant forms of MDMX, we found that MDM2 and MDMX, likely working in part as a complex, normally facilitate ferroptotic death. We observed that MDM2 and MDMX alter the lipid profile of cells to favor ferroptosis. Inhibition of MDM2 or MDMX leads to increased levels of FSP1 protein and a consequent increase in the levels of coenzyme Q10, an endogenous lipophilic antioxidant. This suggests that MDM2 and MDMX normally prevent cells from mounting an adequate defense against lipid peroxidation and thereby promote ferroptosis. Moreover, we found that PPARα activity is essential for MDM2 and MDMX to promote ferroptosis, suggesting that the MDM2–MDMX complex regulates lipids through altering PPARα activity. These findings reveal the complexity of cellular responses to MDM2 and MDMX and suggest that MDM2–MDMX inhibition might be useful for preventing degenerative diseases involving ferroptosis. Furthermore, they suggest that MDM2/MDMX amplification may predict sensitivity of some cancers to ferroptosis inducers.
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Affiliation(s)
- Divya Venkatesh
- Department of Biological Sciences, Columbia University, New York, New York 10027, USA
| | - Nicholas A O'Brien
- Department of Biological Sciences, Columbia University, New York, New York 10027, USA
| | - Fereshteh Zandkarimi
- Department of Biological Sciences, Columbia University, New York, New York 10027, USA
| | - David R Tong
- Department of Biological Sciences, Columbia University, New York, New York 10027, USA
| | - Michael E Stokes
- Department of Biological Sciences, Columbia University, New York, New York 10027, USA
| | - Denise E Dunn
- Center for Drug Discovery, Department of Neurobiology, Duke University Medical Center, Durham, North Carolina 27710, USA
| | - Everett S Kengmana
- Department of Biological Sciences, Columbia University, New York, New York 10027, USA
| | - Allegra T Aron
- Department of Chemistry, University of California at Berkeley, Berkeley, California 94720, USA
| | - Alyssa M Klein
- Integrated Program in Cellular, Molecular, and Biomedical Studies, Columbia University, New York, New York 10032, USA
| | - Joleen M Csuka
- Department of Biological Sciences, Columbia University, New York, New York 10027, USA
| | - Sung-Hwan Moon
- Department of Biological Sciences, Columbia University, New York, New York 10027, USA
| | - Marcus Conrad
- Helmholtz Zentrum München, Institute of Metabolism and Cell Death, Neuherberg 85764, Germany
| | - Christopher J Chang
- Department of Chemistry, University of California at Berkeley, Berkeley, California 94720, USA.,Department of Molecular and Cell Biology, University of California at Berkeley, Berkeley, California 94720, USA
| | - Donald C Lo
- Center for Drug Discovery, Department of Neurobiology, Duke University Medical Center, Durham, North Carolina 27710, USA
| | - Angelo D'Alessandro
- Department of Biochemistry and Molecular Genetics, University of Colorado Denver, Aurora, Colorado 80045, USA
| | - Carol Prives
- Department of Biological Sciences, Columbia University, New York, New York 10027, USA
| | - Brent R Stockwell
- Department of Biological Sciences, Columbia University, New York, New York 10027, USA.,Department of Chemistry, Columbia University, New York, New York 10027, USA
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83
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Shahid A, Malik S, Zhu H, Xu J, Nawaz MZ, Nawaz S, Asraful Alam M, Mehmood MA. Cultivating microalgae in wastewater for biomass production, pollutant removal, and atmospheric carbon mitigation; a review. THE SCIENCE OF THE TOTAL ENVIRONMENT 2020; 704:135303. [PMID: 31818584 DOI: 10.1016/j.scitotenv.2019.135303] [Citation(s) in RCA: 148] [Impact Index Per Article: 37.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/07/2019] [Revised: 10/27/2019] [Accepted: 10/29/2019] [Indexed: 06/10/2023]
Abstract
Water shortage is one of the leading global problems along with the depletion of energy resources and environmental deterioration. Recent industrialization, global mobility, and increasing population have adversely affected the freshwater resources. The wastewater sources are categorized as domestic, agricultural and industrial effluents and their disposal into water bodies poses a harmful impact on human and animal health due to the presence of higher amounts of nitrogen, phosphorus, sulfur, heavy metals and other organic/inorganic pollutants. Several conventional treatment methods have been employed, but none of those can be termed as a universal method due to their high cost, less efficiency, and non-environment friendly nature. Alternatively, wastewater treatment using microalgae (phycoremediation) offers several advantages over chemical-based treatment methods. Microalgae cultivation using wastewater offers the highest atmospheric carbon fixation rate (1.83 kg CO2/kg of biomass) and fastest biomass productivity (40-50% higher than terrestrial crops) among all terrestrial bio-remediators with concomitant pollutant removal (80-100%). Moreover, the algal biomass may contain high-value metabolites including omega-3-fatty acids, pigments, amino acids, and high sugar content. Hence, after extraction of high-value compounds, residual biomass can be either directly converted to energy through thermochemical transformation or can be used to produce biofuels through biological fermentation or transesterification. This review highlights the recent advances in microalgal biotechnology to establish a biorefinery approach to treat wastewater. The articulation of wastewater treatment facilities with microalgal biorefinery, the use of microalgal consortia, the possible merits, and demerits of phycoremediation are also discussed. The impact of wastewater-derived nutrient stress and its exploitation to modify the algal metabolite content in view of future concerns of cost-benefit ratios of algal biorefineries is also highlighted.
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Affiliation(s)
- Ayesha Shahid
- Bioenergy Research Centre, Department of Bioinformatics & Biotechnology, Government College University Faisalabad, Faisalabad 38000, Pakistan
| | - Sana Malik
- Bioenergy Research Centre, Department of Bioinformatics & Biotechnology, Government College University Faisalabad, Faisalabad 38000, Pakistan
| | - Hui Zhu
- School of Bioengineering, Sichuan University of Science and Engineering, Zigong 643000, People's Republic of China
| | - Jianren Xu
- College of Bioscience and Engineering, North Minzu University, Yinchuan 750021, Ningxia, China
| | - Muhammad Zohaib Nawaz
- State Key Laboratory of Marine Environmental Science, Institute of Marine Microbes and Ecospheres, College of Ocean and Earth Sciences, Xiamen University, Xiamen, China; Department of Computer Science, The University of Agriculture Faisalabad, Faisalabad 38000, Pakistan
| | - Shahid Nawaz
- Department of Chemistry, The University of Agriculture Faisalabad, Faisalabad 38000, Pakistan
| | - Md Asraful Alam
- School of Chemical Engineering, Zhengzhou University, Zhengzhou 450001, China.
| | - Muhammad Aamer Mehmood
- School of Bioengineering, Sichuan University of Science and Engineering, Zigong 643000, People's Republic of China; Bioenergy Research Centre, Department of Bioinformatics & Biotechnology, Government College University Faisalabad, Faisalabad 38000, Pakistan.
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84
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Zhao Y, Song X, Zhong DB, Yu L, Yu X. γ-Aminobutyric acid (GABA) regulates lipid production and cadmium uptake by Monoraphidium sp. QLY-1 under cadmium stress. BIORESOURCE TECHNOLOGY 2020; 297:122500. [PMID: 31796380 DOI: 10.1016/j.biortech.2019.122500] [Citation(s) in RCA: 32] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/14/2019] [Revised: 11/19/2019] [Accepted: 11/25/2019] [Indexed: 06/10/2023]
Abstract
This study explored the effects of γ-aminobutyric acid (GABA) on the production of biomass and lipids and on the uptake of Cd2+ by microalgae under cadmium (Cd) stress. Compared with the control and Cd stress alone, 2.5 mM GABA increased the maximum lipid content (55.37%) by 49.37% and 9.42%, respectively. GABA application resulted in increased contents of protein and glutathione (GSH) and in upregulated activity of α-amylase but decreased contents of starch, reactive oxygen species (ROS) and Cd2+, with no effect on subsequent biodiesel quality. Additional analysis of GABA further indicated that increased cellular GABA contents could promote lipid synthesis and reduce Cd accumulation by regulating the expression levels of lipogenesis genes, ROS signalling and mineral nutrient uptake under Cd stress. Collectively, these findings show that GABA not only increases lipid production in microalgae but also is involved in the mechanisms by which microalgae respond to Cd stress.
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Affiliation(s)
- Yongteng Zhao
- Faculty of Life Science and Technology, Kunming University of Science and Technology, Kunming 650500, China
| | - Xueting Song
- Faculty of Life Science and Technology, Kunming University of Science and Technology, Kunming 650500, China
| | - Du-Bo Zhong
- Yunnan Yunce Quality Testing Co., Ltd, Kunming 650217, China
| | - Lei Yu
- College of Agronomy and Life Science, Yunnan Urban Agricultural Engineering & Technological Research Center, Kunming University, Kunming 650214, China
| | - Xuya Yu
- Faculty of Life Science and Technology, Kunming University of Science and Technology, Kunming 650500, China.
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85
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Dong L, Li D, Li C. Characteristics of lipid biosynthesis of Chlorella pyrenoidosa under stress conditions. Bioprocess Biosyst Eng 2020; 43:877-884. [PMID: 31955255 DOI: 10.1007/s00449-020-02284-x] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/11/2019] [Accepted: 01/07/2020] [Indexed: 11/25/2022]
Abstract
Effects of high light, high salt, nitrogen and phosphorus deficiency on growth and lipid production of Chlorella pyrenoidosa were investigated in a flat-plate photoreactor, and the oil quality indexes such as CN, IV, SV, CFPP, DU, and LCSF were also evaluated. The results show that the growth of C. pyrenoidosa was inhibited under the stress conditions, but the intracellular lipid content was significantly increased. Moreover, the combustion performance, oxidation stability, low temperature fluidity, and other oil quality indicators under these nutrient stress conditions were significantly improved. Importantly, it is found that starch was preferentially synthesized by algal cells, while with the prolongation of stress time, starch was gradually degraded, and the degraded carbon skeleton was mainly used for lipid synthesis.
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Affiliation(s)
- Liang Dong
- College of Bioengineering, Sichuan University of Science and Engineering, Zigong, 643000, People's Republic of China.
| | - Dong Li
- College of Bioengineering, Sichuan University of Science and Engineering, Zigong, 643000, People's Republic of China
| | - Chun Li
- Key Laboratory of Biorheological Science and Technology (Chongqing University), Ministry of Education, College of Bioengineering, Chongqing University, Chongqing, 400030, China
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86
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Lactobacillus salivarius BGHO1 and Lactobacillus reuteri BGGO6-55 modify nutritive profile of Artemia franciscana nauplii in a strain ratio, dose and application timing-dependent manner. Anim Feed Sci Technol 2020. [DOI: 10.1016/j.anifeedsci.2019.114356] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
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87
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Zhao Y, Xing H, Li X, Geng S, Ning D, Ma T, Yu X. Physiological and Metabolomics Analyses Reveal the Roles of Fulvic Acid in Enhancing the Production of Astaxanthin and Lipids in Haematococcus pluvialis under Abiotic Stress Conditions. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2019; 67:12599-12609. [PMID: 31644277 DOI: 10.1021/acs.jafc.9b04964] [Citation(s) in RCA: 26] [Impact Index Per Article: 5.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/10/2023]
Abstract
In this study, it was found that fulvic acid (FA) enhanced the contents of astaxanthin and lipids in Haematococcus pluvialis under high light and nitrogen starvation conditions by 2- and 1.2-fold, respectively. Meanwhile, the carbohydrate and chlorophyll contents were decreased by FA induction, whereas the levels of reactive oxygen species (ROS) and glutathione (GSH) as well as the expression of astaxanthin and lipid biosynthetic genes were increased. To further explore the interrelation between FA and the biosynthesis of astaxanthin and lipids, a metabolomics analysis of H. pluvialis by combined FA and abiotic stress exposure was conducted by using LC-MS/MS. The contents of some cytoprotective metabolites and signal molecules, including d-maltose, succinate, malic acid, melatonin (MT), and some amino acids, were increased under FA induction and abiotic stress conditions. These metabolites are intermediates in the TCA cycle and Calvin cycle, providing more precursors for the synthesis of astaxanthin and lipids. Moreover, the signal molecules might contribute to enhancing the abiotic stress tolerance. This study provided new insights into the regulatory mechanism of FA on astaxanthin and lipid accumulation in H. pluvialis.
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Affiliation(s)
- Yongteng Zhao
- Faculty of Life Science and Technology , Kunming University of Science and Technology , Kunming 650500 , China
| | - Hailiang Xing
- Faculty of Life Science and Technology , Kunming University of Science and Technology , Kunming 650500 , China
| | - Xingyu Li
- The First People's Hospital of Yunnan , Kunming 650100 , China
| | | | - Delu Ning
- Yunnan Academy of Forestry , Kunming 650051 , China
| | - Ting Ma
- Yunnan Academy of Forestry , Kunming 650051 , China
| | - Xuya Yu
- Faculty of Life Science and Technology , Kunming University of Science and Technology , Kunming 650500 , China
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88
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Steadman Tyler CR, Sanders CK, Erickson RS, Dale T, Twary SN, Marrone BL. Functional and phenotypic flow cytometry characterization of Picochlorum soloecismus. ALGAL RES 2019. [DOI: 10.1016/j.algal.2019.101614] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
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89
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Tran QG, Cho K, Kim U, Yun JH, Cho DH, Heo J, Park SB, Kim JW, Lee YJ, Ramanan R, Kim HS. Enhancement of β-carotene production by regulating the autophagy-carotenoid biosynthesis seesaw in Chlamydomonas reinhardtii. BIORESOURCE TECHNOLOGY 2019; 292:121937. [PMID: 31408779 DOI: 10.1016/j.biortech.2019.121937] [Citation(s) in RCA: 16] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/12/2019] [Revised: 07/29/2019] [Accepted: 07/30/2019] [Indexed: 06/10/2023]
Abstract
This work aimed to demonstrate a new strategy for enhancing the production of carotenoids through the regulation of seesaw cross-talk between autophagy and carotenoid biosynthesis pathways in Chlamydomonas reinhardtii. Autophagy-related ATG1 and ATG8 genes were first silenced using artificial microRNA, which in turn reduced the mRNA expression of ATG1 and ATG8 by 84.4% and 74.3%, respectively. While ATG1 kinase controls early step in autophagy induction and ATG8 is an essential factor for the downstream formation of autophagosome membranes, the decreased expression of these genes led to a 2.34-fold increase in the amount of β-carotene content (i.e., 23.75 mg/g DCW). Furthermore, all mutants seemed to exhibit greater biodiesel properties than that of wild-type due to increased accumulation of saturated and monounsaturated fatty acids. These results support the role of autophagy in regulating the production of valuable metabolites, which could contribute to uplifting the economic outlook of nascent algal biorefinery.
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Affiliation(s)
- Quynh-Giao Tran
- Cell Factory Research Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB), Daejeon 34141, Republic of Korea; Department of Environmental Biotechnology, KRIBB School of Biotechnology, University of Science & Technology (UST), Daejeon 34113, Republic of Korea
| | - Kichul Cho
- Environmental Safety Group, Korea Institute of Science and Technology (KIST) Europe, Campus E 7.1, 66123 Saarbrücken, Germany
| | - Urim Kim
- Cell Factory Research Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB), Daejeon 34141, Republic of Korea; Department of Environmental Biotechnology, KRIBB School of Biotechnology, University of Science & Technology (UST), Daejeon 34113, Republic of Korea
| | - Jin-Ho Yun
- Cell Factory Research Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB), Daejeon 34141, Republic of Korea
| | - Dae-Hyun Cho
- Cell Factory Research Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB), Daejeon 34141, Republic of Korea
| | - Jina Heo
- Cell Factory Research Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB), Daejeon 34141, Republic of Korea; Department of Environmental Biotechnology, KRIBB School of Biotechnology, University of Science & Technology (UST), Daejeon 34113, Republic of Korea
| | - Su-Bin Park
- Cell Factory Research Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB), Daejeon 34141, Republic of Korea; Department of Environmental Biotechnology, KRIBB School of Biotechnology, University of Science & Technology (UST), Daejeon 34113, Republic of Korea
| | - Ji Won Kim
- Cell Factory Research Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB), Daejeon 34141, Republic of Korea; Department of Environmental Biotechnology, KRIBB School of Biotechnology, University of Science & Technology (UST), Daejeon 34113, Republic of Korea
| | - Yong Jae Lee
- Cell Factory Research Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB), Daejeon 34141, Republic of Korea
| | - Rishiram Ramanan
- Department of Environmental Science, Central University of Kerala, Kasaragod, Kerala, India
| | - Hee-Sik Kim
- Cell Factory Research Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB), Daejeon 34141, Republic of Korea; Department of Environmental Biotechnology, KRIBB School of Biotechnology, University of Science & Technology (UST), Daejeon 34113, Republic of Korea.
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90
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Zavatti V, Budman H, Legge RL, Tamer M. Impact of oxidative stress on protein production by Bordetella pertussis for vaccine production. Biochem Eng J 2019. [DOI: 10.1016/j.bej.2019.107359] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
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91
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Gong G, Liu L, Zhang X, Tan T. Comparative evaluation of different carbon sources supply on simultaneous production of lipid and carotene of Rhodotorula glutinis with irradiation and the assessment of key gene transcription. BIORESOURCE TECHNOLOGY 2019; 288:121559. [PMID: 31152958 DOI: 10.1016/j.biortech.2019.121559] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/16/2019] [Revised: 05/22/2019] [Accepted: 05/23/2019] [Indexed: 06/09/2023]
Abstract
To investigate the feasibility of simultaneously enhancing lipid and carotene production by irradiation with different carbon sources, a strategy by controlling the carbon sources supply were selected to culture Rhodotorula glutinis under the irradiation condition. The results demonstrated that the irradiation indeed enhanced cell growth, lipid and carotene production with different carbon sources supply. Besides, the fatty acids profiling as revealed by more unsaturated fatty acids (mainly C16:1, C18:2 and C18:3) and less saturated fatty acids (C18:0, C22:0 and C24:0) were found during the process of irradiation. Compared with the control, the increase of the transcription levels in genes connected with substrates assimilation, lipid production and carotene accumulation were observed under the irradiation condition. The results suggest the possibility of using irradiation as an effective strategy to increase the production of both lipid and carotene with the controlled carbon sources supply.
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Affiliation(s)
- Guiping Gong
- Beijing Key Lab of Bioprocess, National Energy R&D Center for Biorefinery, College of Life Science and Technology, Beijing University of Chemical Technology, Beijing 100029, PR China
| | - Luo Liu
- Beijing Key Lab of Bioprocess, National Energy R&D Center for Biorefinery, College of Life Science and Technology, Beijing University of Chemical Technology, Beijing 100029, PR China
| | - Xu Zhang
- Beijing Key Lab of Bioprocess, National Energy R&D Center for Biorefinery, College of Life Science and Technology, Beijing University of Chemical Technology, Beijing 100029, PR China.
| | - Tianwei Tan
- Beijing Key Lab of Bioprocess, National Energy R&D Center for Biorefinery, College of Life Science and Technology, Beijing University of Chemical Technology, Beijing 100029, PR China
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92
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Dong X, Han B, Zhao Y, Ding W, Yu X. Enhancing biomass, lipid production, and nutrient utilization of the microalga Monoraphidium sp. QLZ-3 in walnut shell extracts supplemented with carbon dioxide. BIORESOURCE TECHNOLOGY 2019; 287:121419. [PMID: 31078811 DOI: 10.1016/j.biortech.2019.121419] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/12/2019] [Revised: 05/01/2019] [Accepted: 05/02/2019] [Indexed: 06/09/2023]
Abstract
Microalgae are a promising biofuel resource, but their high cost and low productivity hinder their commercial applications. In the present study, Monoraphidium sp. QLZ-3 was cultivated in walnut shell extracts (WSE) supplemented with carbon dioxide (CO2). Biomass was enhanced from 0.40 g L-1 to 1.18 g L-1, and lipid content reached 49.54% in WSE-12% CO2 media. Biomass and lipid productivity reached 196.88 and 97.52 mg L-1 d-1, which were 1.33- and 1.57-fold higher than those of the control, respectively. The amount of carbohydrates increased, but the protein contents decreased. Furthermore, the application of CO2 promoted nutrient and polyphenol absorption and upregulated the expression levels of lipid biosynthetic genes of this WSE-cultivated alga. These results indicated that coupling WSE and CO2 could be an efficient strategy to enhance biofuel production by microalgae.
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Affiliation(s)
- Xunzan Dong
- Faculty of Life Science and Technology, Kunming University of Science and Technology, Kunming, China
| | - Benyong Han
- Faculty of Life Science and Technology, Kunming University of Science and Technology, Kunming, China
| | - Yongteng Zhao
- Faculty of Life Science and Technology, Kunming University of Science and Technology, Kunming, China
| | - Wei Ding
- Faculty of Life Science and Technology, Kunming University of Science and Technology, Kunming, China
| | - Xuya Yu
- Faculty of Life Science and Technology, Kunming University of Science and Technology, Kunming, China.
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93
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Zhang L, Liao C, Yang Y, Wang YZ, Ding K, Huo D, Hou C. Response of lipid biosynthesis in Chlorella pyrenoidosa to intracellular reactive oxygen species level under stress conditions. BIORESOURCE TECHNOLOGY 2019; 287:121414. [PMID: 31078813 DOI: 10.1016/j.biortech.2019.121414] [Citation(s) in RCA: 24] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/18/2019] [Revised: 05/01/2019] [Accepted: 05/02/2019] [Indexed: 06/09/2023]
Abstract
An increase in the total lipid content in algal cells under stress conditions is often accompanied by an increase in reactive oxygen species (ROS). However, the link between these two events is unclear. In this study, the regulatory mechanism of ROS formation on lipid accumulation in C. pyrenoidosa was investigated using a Fenton-like reaction. A high Spearman correlation coefficient of 0.901 was obtained between the Hydroxyl radical (OH) level and lipid content. Importantly, the increase in the total lipid content was clearly coupled with a significant increase in the intracellular OH concentration rather than increases in the H2O2 and O2- concentrations. Transcriptome data confirms that most of the differential expression genes (DEGs) involved in fatty acid and glycerolipid biosynthesis were up-regulated by the increased OH under stress conditions. These results reveal that lipid accumulation in algal cells was promoted by OH.
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Affiliation(s)
- Lei Zhang
- Key Laboratory of Biorheological Science and Technology (Chongqing University), Ministry of Education, College of Bioengineering, Chongqing University, Chongqing 400030, China
| | - Chunmei Liao
- Key Laboratory of Biorheological Science and Technology (Chongqing University), Ministry of Education, College of Bioengineering, Chongqing University, Chongqing 400030, China
| | - Yingwu Yang
- Key Laboratory of Biorheological Science and Technology (Chongqing University), Ministry of Education, College of Bioengineering, Chongqing University, Chongqing 400030, China
| | - Yong-Zhong Wang
- Key Laboratory of Biorheological Science and Technology (Chongqing University), Ministry of Education, College of Bioengineering, Chongqing University, Chongqing 400030, China.
| | - Ke Ding
- Key Laboratory of Biorheological Science and Technology (Chongqing University), Ministry of Education, College of Bioengineering, Chongqing University, Chongqing 400030, China
| | - Danqun Huo
- Key Laboratory of Biorheological Science and Technology (Chongqing University), Ministry of Education, College of Bioengineering, Chongqing University, Chongqing 400030, China
| | - Changjun Hou
- Key Laboratory of Biorheological Science and Technology (Chongqing University), Ministry of Education, College of Bioengineering, Chongqing University, Chongqing 400030, China
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94
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Lee MT, Lin WC, Lin LJ, Wang SY, Chang SC, Lee TT. Effects of dietary Antrodia cinnamomea fermented product supplementation on metabolism pathways of antioxidant, inflammatory, and lipid metabolism pathways-a potential crosstalk. ASIAN-AUSTRALASIAN JOURNAL OF ANIMAL SCIENCES 2019; 33:1167-1179. [PMID: 31480133 PMCID: PMC7322654 DOI: 10.5713/ajas.19.0393] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 05/11/2019] [Accepted: 08/19/2019] [Indexed: 12/26/2022]
Abstract
Objective This study was conducted to fathom the underlying mechanisms of nutrition intervention and redox sensitive transcription factors regulated by Antrodia cinnamomea fermented product (FAC) dietary supplementation in broiler chickens. Methods Four hundreds d-old broilers (41±0.5 g/bird) assigned to 5 groups were examined after consuming control diet, or control diet replaced with 5% wheat bran (WB), 10% WB, 5% FAC, and 10% FAC. Liver mRNA expression of antioxidant, inflammatory and lipid metabolism pathways were analyzed. Prostaglandin E2 (PGE2) concentration in each group were tested in the chicken peripheral blood mononuclear cells (cPBMCs) of 35-d old broilers to represent the stress level of the chickens. Furthermore, these cells were stimulated with 2,2′-Azobis(2-amidinopropane) dihydrochloride (AAPH) and lipopolysaccharide (LPS) to evaluate the cell stress tolerance by measuring cell viability and oxidative species. Results Heme oxygenase-1, glutathione S-transferase, glutamate-cysteine ligase, catalytic subunit, and superoxide dismutase, and nuclear factor (erythroid-derived 2)-like 2 (Nrf2) that regulates the above antioxidant genes were all up-regulated significantly in FAC groups. Reactive oxygen species modulator protein 1 and NADPH oxygenase 1 were both rather down-regulated in 10% FAC group as comparison with two WB groups. Despite expressing higher level than control group, birds receiving diet containing FAC had significantly lower expression level in nuclear factor-kappa B (NF-κB) and other genes (inducible nitric oxide synthase, tumor necrosis factor-α, interleukin-1β, nucleotide-binding domain, leucine-rich-containing family, pyrin domain-containing-3, and cyclooxygenase 2) involving in inflammatory pathways. Additionally, except for 3-hydroxy-3-methyl-glutaryl-coenzyme A reductase that showed relatively higher in both groups, the WB, lipoprotein lipase, Acetyl-CoA carboxylase, fatty acid synthase, fatty acid binding protein, fatty acid desaturase 2 and peroxisome proliferator-activated receptor alpha genes were expressed at higher levels in 10% FAC group. In support of above results, promoted Nrf2 and inhibited NF-κB nuclear translocation in chicken liver were found in FAC containing groups. H2O2 and NO levels induced by LPS and AAPH in cPBMCs were compromised in FAC containing diet. In 35-d-old birds, PGE2 production in cPBMCs was also suppressed by the FAC diet. Conclusion FAC may promote Nrf2 antioxidant pathway and positively regulate lipid metabolism, both are potential inhibitor of NF-κB inflammatory pathway.
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Affiliation(s)
- M T Lee
- Department of Animal Science, National Chung Hsing University, Taichung 402, Taiwan
| | - W C Lin
- Department of Animal Science, National Chung Hsing University, Taichung 402, Taiwan
| | - L J Lin
- School of Chinese Medicine, College of Chinese Medicine, China Medical University, Taichung 402, Taiwan
| | - S Y Wang
- Department of Forestry, National Chung Hsing University, Taichung 402, Taiwan
| | - S C Chang
- Kaohsiung Animal Propagation Station, Livestock Research Institute, Council of Agriculture, Kaohsiung 912, Taiwan
| | - T T Lee
- Department of Animal Science, National Chung Hsing University, Taichung 402, Taiwan.,The iEGG and Animal Biotechnology Center, National Chung Hsing University, Taichung 402, Taiwan
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95
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Xin X, Huang G, An C, Feng R. Interactive Toxicity of Triclosan and Nano-TiO 2 to Green Alga Eremosphaera viridis in Lake Erie: A New Perspective Based on Fourier Transform Infrared Spectromicroscopy and Synchrotron-Based X-ray Fluorescence Imaging. ENVIRONMENTAL SCIENCE & TECHNOLOGY 2019; 53:9884-9894. [PMID: 31322895 DOI: 10.1021/acs.est.9b03117] [Citation(s) in RCA: 34] [Impact Index Per Article: 6.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/10/2023]
Abstract
This study explored the toxicity of triclosan in the presence of TiO2 P25 to the green alga Eremosphaera viridis in Lake Erie. Multiple physicochemical end points were conducted to perform a comprehensive analysis of the toxic effects of individual and combined pollutants. Fourier transform infrared spectromicroscopy and synchrotron-based X-ray fluorescence imaging were first documented to be applied to explore the distribution variation of macromolecules and microelements in single algal cells in interactive toxicity studies. The results were different based on different triclosan concentrations and measurement end points. Comparing with individual pollutants, the toxicity intensified in lipids, proteins, and oxidative stress at 1000 and 4000 μg/L triclosan in the presence of P25. There were increases in dry weight, chlorophyll content, lipids, and catalase content when cells were exposed to P25 and 15.625 μg/L triclosan. The toxicity alleviated when P25 interacted with 62.5 and 250 μg/L triclosan compared with triclosan-only exposure. The reasons could be attributed to the combination of adsorption, biodegradation, and photocatalysis of triclosan by algae and P25, triclosan dispersion by increased biomass, triclosan adherency on algal exudates, and triclosan adsorption site reduction on algae surface owing to P25's taking over. This work provides new insights into the interactive toxicity of nanoparticles and personal care products to freshwater photosynthetic organisms. The findings can help with risk evaluation for predicting outcomes of exposure to mixtures and with prioritizing further studies on joint toxicity.
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Affiliation(s)
- Xiaying Xin
- Institute for Energy, Environment and Sustainable Communities , University of Regina , Regina S4S 0A2 , Canada
| | - Gordon Huang
- Institute for Energy, Environment and Sustainable Communities , University of Regina , Regina S4S 0A2 , Canada
| | - Chunjiang An
- Department of Building, Civil and Environmental Engineering , Concordia University , Montreal H3G 1M8 , Canada
| | - Renfei Feng
- Canadian Light Source , Saskatoon S7N 2 V3 , Saskatchewan , Canada
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96
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Tran QG, Cho K, Park SB, Kim U, Lee YJ, Kim HS. Impairment of starch biosynthesis results in elevated oxidative stress and autophagy activity in Chlamydomonas reinhardtii. Sci Rep 2019; 9:9856. [PMID: 31285472 PMCID: PMC6614365 DOI: 10.1038/s41598-019-46313-6] [Citation(s) in RCA: 16] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/15/2018] [Accepted: 06/26/2019] [Indexed: 02/08/2023] Open
Abstract
Autophagy is a self-degradation system wherein cellular materials are recycled. Although autophagy has been extensively studied in yeast and mammalian systems, integrated stress responses in microalgae remain poorly understood. Accordingly, we carried out a comparative study on the oxidative stress responses of Chlamydomonas reinhardtii wild-type and a starchless (sta6) mutant previously shown to accumulate high lipid content under adverse conditions. To our surprise, the sta6 mutant exhibited significantly higher levels of lipid peroxidation in the same growth conditions compared to controls. The sta6 mutant was more sensitive to oxidative stress induced by H2O2, whereas the wild-type was relatively more resistant. In addition, significantly up-regulated autophagy-related factors including ATG1, ATG101, and ATG8 were maintained in the sta6 mutant regardless of nitrogen availability. Also, the sta6 mutant exhibited relatively higher ATG8 protein level compared to wild-type under non-stress condition, and quickly reached a saturation point of autophagy when H2O2 was applied. Our results indicate that, in addition to the impact of carbon allocation, the increased lipid phenotype of the sta6 mutant may result from alterations in the cellular oxidative state, which in turn activates autophagy to clean up oxidatively damaged components and fuel lipid production.
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Affiliation(s)
- Quynh-Giao Tran
- Cell Factory Research Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB), Daejeon, 34141, Republic of Korea.,Department of Environmental Biotechnology, KRIBB school of Biotechnology, Korea University of Science & Technology (UST), Daejeon, 34113, Republic of Korea
| | - Kichul Cho
- Environmental Safety Group, Korea Institute of Science and Technology (KIST) Europe, Campus E 7.1, Saarbrücken, 66123, Germany
| | - Su-Bin Park
- Cell Factory Research Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB), Daejeon, 34141, Republic of Korea.,Department of Environmental Biotechnology, KRIBB school of Biotechnology, Korea University of Science & Technology (UST), Daejeon, 34113, Republic of Korea
| | - Urim Kim
- Cell Factory Research Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB), Daejeon, 34141, Republic of Korea.,Department of Environmental Biotechnology, KRIBB school of Biotechnology, Korea University of Science & Technology (UST), Daejeon, 34113, Republic of Korea
| | - Yong Jae Lee
- Cell Factory Research Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB), Daejeon, 34141, Republic of Korea
| | - Hee-Sik Kim
- Cell Factory Research Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB), Daejeon, 34141, Republic of Korea. .,Department of Environmental Biotechnology, KRIBB school of Biotechnology, Korea University of Science & Technology (UST), Daejeon, 34113, Republic of Korea.
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97
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Cheng J, Hui M, Sha Z. Transcriptomic analysis reveals insights into deep-sea adaptations of the dominant species, Shinkaia crosnieri (Crustacea: Decapoda: Anomura), inhabiting both hydrothermal vents and cold seeps. BMC Genomics 2019; 20:388. [PMID: 31103028 PMCID: PMC6525460 DOI: 10.1186/s12864-019-5753-7] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/06/2018] [Accepted: 04/30/2019] [Indexed: 01/06/2023] Open
Abstract
Background Hydrothermal vents and cold seeps are typical deep-sea chemosynthetically-driven ecosystems that allow high abundance of specialized macro-benthos. To gather knowledge about the genetic basis of adaptation to these extreme environments, species shared between different habitats, especially for the dominant species, are of particular interest. The galatheid squat lobster, Shinkaia crosnieri Baba and Williams, 1998, is one of the few dominant species inhabiting both deep-sea hydrothermal vents and cold seeps. In this study, we performed transcriptome analyses of S. crosnieri collected from the Iheya North hydrothermal vent (HV) and a cold seep in the South China Sea (CS) to provide insights into how this species has evolved to thrive in different deep-sea chemosynthetic ecosystems. Results We analyzed 5347 orthologs between HV and CS to identify genes under positive selection through the maximum likelihood approach. A total of 82 genes were identified to be positively selected and covered diverse functional categories, potentially indicating their importance for S. crosnieri to cope with environmental heterogeneity between deep-sea vents and seeps. Among 39,806 annotated unigenes, a large number of differentially expressed genes (DEGs) were identified between HV and CS, including 339 and 206 genes significantly up-regulated in HV and CS, respectively. Most of the DEGs associated with stress response and immunity were up-regulated in HV, possibly allowing S. crosnieri to increase its capability to manage more environmental stresses in the hydrothermal vents. Conclusions We provide the first comprehensive transcriptomic resource for the deep-sea squat lobster, S. crosnieri, inhabiting both hydrothermal vents and cold seeps. A number of stress response and immune-related genes were positively selected and/or differentially expressed, potentially indicating their important roles for S. crosnieri to thrive in both deep-sea vents and cold seeps. Our results indicated that genetic adaptation of S. crosnieri to different deep-sea chemosynthetic environments might be mediated by adaptive evolution of functional genes related to stress response and immunity, and alterations in their gene expression that lead to different stress resistance. However, further work is required to test these proposed hypotheses. All results can constitute important baseline data for further studies towards elucidating the adaptive mechanisms in deep-sea crustaceans. Electronic supplementary material The online version of this article (10.1186/s12864-019-5753-7) contains supplementary material, which is available to authorized users.
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Affiliation(s)
- Jiao Cheng
- Laboratory of Marine Organism Taxonomy and Phylogeny, Institute of Oceanology, Chinese Academy of Sciences, Qingdao, 266071, China.,Center for Ocean Mega-Science, Chinese Academy of Sciences, Qingdao, 266071, China
| | - Min Hui
- Laboratory of Marine Organism Taxonomy and Phylogeny, Institute of Oceanology, Chinese Academy of Sciences, Qingdao, 266071, China.,Center for Ocean Mega-Science, Chinese Academy of Sciences, Qingdao, 266071, China
| | - Zhongli Sha
- Laboratory of Marine Organism Taxonomy and Phylogeny, Institute of Oceanology, Chinese Academy of Sciences, Qingdao, 266071, China. .,Laboratory for Marine Biology and Biotechnology, Qingdao National Laboratory for Marine Science and Technology, Qingdao, 266237, China. .,Center for Ocean Mega-Science, Chinese Academy of Sciences, Qingdao, 266071, China. .,University of Chinese Academy of Sciences, Beijing, 100049, China.
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98
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Aguilera-Sáez LM, Abreu AC, Camacho-Rodríguez J, González-López CV, Del Carmen Cerón-García M, Fernández I. NMR Metabolomics as an Effective Tool To Unravel the Effect of Light Intensity and Temperature on the Composition of the Marine Microalgae Isochrysis galbana. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2019; 67:3879-3889. [PMID: 30920825 DOI: 10.1021/acs.jafc.8b06840] [Citation(s) in RCA: 21] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/09/2023]
Abstract
NMR spectroscopy coupled with multivariate data analysis techniques was applied to obtain meaningful information about nontargeted metabolic changes on Isochrysis galbana upon acclimation to different environmental conditions at indoor lab-scale. The effects of temperature (from 15 to 30 °C) and incident irradiance (from 250 to 1600 μmol m-2 s-1) at a constant dilution rate of 0.3 h-1 were evaluated. High irradiances stimulated a decrease of chlorophyll a, fucoxanthin and amino acids content, and the conversion of polar fatty acids (PLs, GLs, DGDGs, SGDGs) to neutral fatty acids (saturated and unsaturated). High temperatures together with high irradiances decreased PUFAs concentration, including omega-3 fatty acids. Under low irradiance and temperature organic osmolytes (homarine, DMSP, GBT, and glycerol), and sugars (glucose, trehalose, and galactose) were also reduced.
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Affiliation(s)
- Luis Manuel Aguilera-Sáez
- Department of Chemistry and Physics and Department of Chemical Engineering, Research Centre CIAIMBITAL , University of Almería , Ctra. Sacramento, s/n, 04120 , Almería ( Spain )
| | - Ana Cristina Abreu
- Department of Chemistry and Physics and Department of Chemical Engineering, Research Centre CIAIMBITAL , University of Almería , Ctra. Sacramento, s/n, 04120 , Almería ( Spain )
| | - Javier Camacho-Rodríguez
- Department of Chemistry and Physics and Department of Chemical Engineering, Research Centre CIAIMBITAL , University of Almería , Ctra. Sacramento, s/n, 04120 , Almería ( Spain )
| | - Cynthia Victoria González-López
- Department of Chemistry and Physics and Department of Chemical Engineering, Research Centre CIAIMBITAL , University of Almería , Ctra. Sacramento, s/n, 04120 , Almería ( Spain )
| | - María Del Carmen Cerón-García
- Department of Chemistry and Physics and Department of Chemical Engineering, Research Centre CIAIMBITAL , University of Almería , Ctra. Sacramento, s/n, 04120 , Almería ( Spain )
| | - Ignacio Fernández
- Department of Chemistry and Physics and Department of Chemical Engineering, Research Centre CIAIMBITAL , University of Almería , Ctra. Sacramento, s/n, 04120 , Almería ( Spain )
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99
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Engineering Microbes to Produce Polyunsaturated Fatty Acids. Trends Biotechnol 2019; 37:344-346. [DOI: 10.1016/j.tibtech.2018.10.002] [Citation(s) in RCA: 31] [Impact Index Per Article: 6.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/18/2018] [Revised: 09/26/2018] [Accepted: 10/02/2018] [Indexed: 01/08/2023]
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100
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Zhao Y, Wang HP, Han B, Yu X. Coupling of abiotic stresses and phytohormones for the production of lipids and high-value by-products by microalgae: A review. BIORESOURCE TECHNOLOGY 2019; 274:549-556. [PMID: 30558833 DOI: 10.1016/j.biortech.2018.12.030] [Citation(s) in RCA: 132] [Impact Index Per Article: 26.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/19/2018] [Revised: 12/07/2018] [Accepted: 12/09/2018] [Indexed: 05/03/2023]
Abstract
Microalgae can produce lipids and high-value by-products under abiotic stress conditions, including nutrient starvation, high light intensity, extreme temperature, high salinity and the presence of heavy metals. However, the growth and development of microalgae and the accumulation of metabolites may be inhibited by adverse stresses. In recent years, phytohormones have emerged as a topic of intense focus in microalgae research. Phytohormones could sustain the growth of microalgae under abiotic stress conditions. In addition, the combination of plant hormones and abiotic stresses could further promote the biosynthesis of metabolites and improve the ability of microalgae to tolerate abiotic stresses. This review primarily focuses on the regulatory effects of exogenous phytohormones on the biosynthesis of metabolites by microalgae under adverse environmental conditions and discusses the mechanisms of phytohormone-mediated cell growth, stress tolerance and lipid biosynthesis in microalgae under abiotic stress conditions.
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Affiliation(s)
- Yongteng Zhao
- Faculty of Life Science and Technology, Kunming University of Science and Technology, Kunming 650500, China
| | - Hui-Ping Wang
- Children's Hospital Affiliated to Kunming Medical University, Kunming 650228, China
| | - Benyong Han
- Faculty of Life Science and Technology, Kunming University of Science and Technology, Kunming 650500, China
| | - Xuya Yu
- Faculty of Life Science and Technology, Kunming University of Science and Technology, Kunming 650500, China.
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