151
|
Das P, He M, Purdon PL. A dynamic generative model can extract interpretable oscillatory components from multichannel neurophysiological recordings. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2023.07.26.550594. [PMID: 37546851 PMCID: PMC10402019 DOI: 10.1101/2023.07.26.550594] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 08/08/2023]
Abstract
Modern neurophysiological recordings are performed using multichannel sensor arrays that are able to record activity in an increasingly high number of channels numbering in the 100's to 1000's. Often, underlying lower-dimensional patterns of activity are responsible for the observed dynamics, but these representations are difficult to reliably identify using existing methods that attempt to summarize multivariate relationships in a post-hoc manner from univariate analyses, or using current blind source separation methods. While such methods can reveal appealing patterns of activity, determining the number of components to include, assessing their statistical significance, and interpreting them requires extensive manual intervention and subjective judgement in practice. These difficulties with component selection and interpretation occur in large part because these methods lack a generative model for the underlying spatio-temporal dynamics. Here we describe a novel component analysis method anchored by a generative model where each source is described by a bio-physically inspired state space representation. The parameters governing this representation readily capture the oscillatory temporal dynamics of the components, so we refer to it as Oscillation Component Analysis (OCA). These parameters - the oscillatory properties, the component mixing weights at the sensors, and the number of oscillations - all are inferred in a data-driven fashion within a Bayesian framework employing an instance of the expectation maximization algorithm. We analyze high-dimensional electroencephalography and magnetoencephalography recordings from human studies to illustrate the potential utility of this method for neuroscience data.
Collapse
Affiliation(s)
- Proloy Das
- Department of Anesthesiology, Perioperative and Pain Medicine, Stanford University, Stanford, CA 94305
| | - Mingjian He
- Department of Anesthesiology, Perioperative and Pain Medicine, Stanford University, Stanford, CA 94305
- epartment of Psychology, Stanford University, Stanford, CA 94305
| | - Patrick L. Purdon
- Department of Anesthesiology, Perioperative and Pain Medicine, Stanford University, Stanford, CA 94305
- Department of Bioengineering, Stanford University, Stanford, CA 94305
| |
Collapse
|
152
|
Wartman WA, Nuñez Ponasso G, Qi Z, Haueisen J, Maess B, Knösche TR, Weise K, Noetscher GM, Raij T, Makaroff SN. Fast and Accurate EEG/MEG BEM-Based Forward Problem Solution for High-Resolution Head Models. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2024.06.07.598024. [PMID: 38895215 PMCID: PMC11185788 DOI: 10.1101/2024.06.07.598024] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/21/2024]
Abstract
A BEM (boundary element method) based approach is developed to accurately solve an EEG/MEG forward problem for a modern high-resolution head model in approximately 60 seconds using a common workstation. The method utilizes a charge-based BEM with fast multipole acceleration (BEM-FMM) and a "smart" mesh pre-refinement (called b-refinement) close to the singular source(s). No costly matrix-filling or direct solution steps typical for the standard BEM are required; the method generates on-skin voltages as well as MEG magnetic fields for high-resolution head models in approximately 60 seconds after initial model assembly. The method is verified both theoretically and experimentally.
Collapse
Affiliation(s)
- William A Wartman
- Dept. of Electrical and Computer Engineering, Worcester Polytechnic Institute, Worcester, MA, USA
| | - Guillermo Nuñez Ponasso
- Dept. of Electrical and Computer Engineering, Worcester Polytechnic Institute, Worcester, MA, USA
| | - Zhen Qi
- Dept. of Electrical and Computer Engineering, Worcester Polytechnic Institute, Worcester, MA, USA
| | | | - Burkhard Maess
- Max Planck Institute for Human Cognitive and Brain Sciences, Leipzig, Germany
| | - Thomas R Knösche
- Max Planck Institute for Human Cognitive and Brain Sciences, Leipzig, Germany
| | - Konstantin Weise
- Max Planck Institute for Human Cognitive and Brain Sciences, Leipzig, Germany
| | - Gregory M Noetscher
- Dept. of Electrical and Computer Engineering, Worcester Polytechnic Institute, Worcester, MA, USA
| | - Tommi Raij
- Athinoula A. Martinos Center for Biomedical Imaging, Massachusetts General Hospital, Harvard Medical School, Boston, MA, USA
| | - Sergey N Makaroff
- Dept. of Electrical and Computer Engineering, Worcester Polytechnic Institute, Worcester, MA, USA
| |
Collapse
|
153
|
Tran XT, Do T, Pal NR, Jung TP, Lin CT. Multimodal fusion for anticipating human decision performance. Sci Rep 2024; 14:13217. [PMID: 38851836 PMCID: PMC11162455 DOI: 10.1038/s41598-024-63651-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/24/2023] [Accepted: 05/30/2024] [Indexed: 06/10/2024] Open
Abstract
Anticipating human decisions while performing complex tasks remains a formidable challenge. This study proposes a multimodal machine-learning approach that leverages image features and electroencephalography (EEG) data to predict human response correctness in a demanding visual searching task. Notably, we extract a novel set of image features pertaining to object relationships using the Segment Anything Model (SAM), which enhances prediction accuracy compared to traditional features. Additionally, our approach effectively utilizes a combination of EEG signals and image features to streamline the feature set required for the Random Forest Classifier (RFC) while maintaining high accuracy. The findings of this research hold substantial potential for developing advanced fault alert systems, particularly in critical decision-making environments such as the medical and defence sectors.
Collapse
Affiliation(s)
- Xuan-The Tran
- GrapheneX-UTS HAI Centre, Australian AI Institute, Faculty of Engineering and Information Technology (FEIT), University of Technology Sydney (UTS), Sydney, NSW, 2007, Australia
| | - Thomas Do
- GrapheneX-UTS HAI Centre, Australian AI Institute, Faculty of Engineering and Information Technology (FEIT), University of Technology Sydney (UTS), Sydney, NSW, 2007, Australia
| | - Nikhil R Pal
- Electronics and Communication Sciences Unit, Indian Statistical Institute, Calcutta, West Bengal, 700108, India
| | - Tzyy-Ping Jung
- Institute for Neural Computation and Institute of Engineering in Medicine, University of California, San Diego (UCSD), La Jolla, CA, 92093, USA
| | - Chin-Teng Lin
- GrapheneX-UTS HAI Centre, Australian AI Institute, Faculty of Engineering and Information Technology (FEIT), University of Technology Sydney (UTS), Sydney, NSW, 2007, Australia.
| |
Collapse
|
154
|
Orpella J, Flick G, Assaneo MF, Shroff R, Pylkkänen L, Poeppel D, Jackson ES. Reactive Inhibitory Control Precedes Overt Stuttering Events. NEUROBIOLOGY OF LANGUAGE (CAMBRIDGE, MASS.) 2024; 5:432-453. [PMID: 38911458 PMCID: PMC11192511 DOI: 10.1162/nol_a_00138] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 08/21/2023] [Accepted: 02/06/2024] [Indexed: 06/25/2024]
Abstract
Research points to neurofunctional differences underlying fluent speech between stutterers and non-stutterers. Considerably less work has focused on processes that underlie stuttered vs. fluent speech. Additionally, most of this research has focused on speech motor processes despite contributions from cognitive processes prior to the onset of stuttered speech. We used MEG to test the hypothesis that reactive inhibitory control is triggered prior to stuttered speech. Twenty-nine stutterers completed a delayed-response task that featured a cue (prior to a go cue) signaling the imminent requirement to produce a word that was either stuttered or fluent. Consistent with our hypothesis, we observed increased beta power likely emanating from the right pre-supplementary motor area (R-preSMA)-an area implicated in reactive inhibitory control-in response to the cue preceding stuttered vs. fluent productions. Beta power differences between stuttered and fluent trials correlated with stuttering severity and participants' percentage of trials stuttered increased exponentially with beta power in the R-preSMA. Trial-by-trial beta power modulations in the R-preSMA following the cue predicted whether a trial would be stuttered or fluent. Stuttered trials were also associated with delayed speech onset suggesting an overall slowing or freezing of the speech motor system that may be a consequence of inhibitory control. Post-hoc analyses revealed that independently generated anticipated words were associated with greater beta power and more stuttering than researcher-assisted anticipated words, pointing to a relationship between self-perceived likelihood of stuttering (i.e., anticipation) and inhibitory control. This work offers a neurocognitive account of stuttering by characterizing cognitive processes that precede overt stuttering events.
Collapse
Affiliation(s)
- Joan Orpella
- Department of Neuroscience, Georgetown University Medical Center, Washington, DC, USA
- Department of Psychology, New York University, New York, NY, USA
- Department of Communicative Sciences and Disorders, New York University, New York, NY, USA
| | - Graham Flick
- Department of Psychology, New York University, New York, NY, USA
| | - M. Florencia Assaneo
- Institute of Neurobiology, National Autonomous University of Mexico, Mexico City, Mexico
| | - Ravi Shroff
- Department of Applied Statistics, Social Science, and Humanities, New York University, New York, NY, USA
| | - Liina Pylkkänen
- Department of Psychology, New York University, New York, NY, USA
- Department of Linguistics, New York University, New York, NY, USA
- NYUAD Institute, New York University Abu Dhabi, Abu Dhabi, United Arab Emirates
| | - David Poeppel
- Department of Psychology, New York University, New York, NY, USA
- Center for Language, Music and Emotion (CLaME), New York University, New York, NY, USA
- Ernst Strüngmann Institute (ESI) for Neuroscience, Frankfurt, Germany
| | - Eric S. Jackson
- Department of Communicative Sciences and Disorders, New York University, New York, NY, USA
| |
Collapse
|
155
|
Pei Y, Wang Z, Lee TM. P3b correlates of inspection time. IBRO Neurosci Rep 2024; 16:428-435. [PMID: 38510073 PMCID: PMC10950751 DOI: 10.1016/j.ibneur.2024.03.002] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/18/2023] [Accepted: 03/03/2024] [Indexed: 03/22/2024] Open
Abstract
Both P3b and the inspection time (IT) are related with intelligence, yet the P3b correlates of IT are not well understood. This event-related potential study addressed this question by asking participants (N = 28) to perform an IT task. There were three IT conditions with different levels of discriminative stimulus duration, i.e., 33 ms, 67 ms, and 100 ms, and a control condition with no target presentation (0 ms condition). We also measured participants' processing speed with four Elementary Cognitive Tests (ECTs), including a Simple Reaction Time task (SRT), two Choice Reaction Time tasks (CRTs), and a Pattern Discrimination task (PD). Results revealed that an increase in P3b latency with longer duration of the discriminative stimulus. Moreover, the P3b latency was negatively correlated with the accuracy of the IT task in the 33 ms condition, but not evident in the 67 and 100 ms conditions. Furthermore, the P3b latency of the 33 ms condition was positively correlated with the RT of the SRT, but not related with the RTs of CRTs or PD. A significant main effect of duration on the amplitude of P1 was also found. We conclude that the present study provides the neurophysiological correlates of the IT task, and those who are able to accurately perceive and process very briefly presented stimuli have a higher speed of information process, reflected by the P3b latency, yet this relationship is more obvious in the most difficult condition. Combined, our results suggest that P3b is related with the closure of a perceptual epoch to form the neural representation of a stimulus, in support of the "context closure" hypothesis.
Collapse
Affiliation(s)
- Yilai Pei
- Key Laboratory of Brain Functional Genomics (Ministry of Education and Shanghai), Shanghai Key Laboratory of Magnetic Resonance, Affiliated Mental Health Center (ECNU), School of Psychology and Cognitive Science, East China Normal University, Shanghai, China
- China Institute of Education and Social Development, Beijing Normal University, Beijing, China
| | - Zhaoxin Wang
- Key Laboratory of Brain Functional Genomics (Ministry of Education and Shanghai), Shanghai Key Laboratory of Magnetic Resonance, Affiliated Mental Health Center (ECNU), School of Psychology and Cognitive Science, East China Normal University, Shanghai, China
- Shanghai Changning Mental Health Center, Shanghai, China
| | - Tatia M.C. Lee
- Key Laboratory of Brain and Cognitive Sciences, The University of Hong Kong, Hong Kong, China
| |
Collapse
|
156
|
Doradzińska Ł, Bola M. Early Electrophysiological Correlates of Perceptual Consciousness Are Affected by Both Exogenous and Endogenous Attention. J Cogn Neurosci 2024; 36:1297-1324. [PMID: 38579265 DOI: 10.1162/jocn_a_02156] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/07/2024]
Abstract
It has been proposed that visual awareness negativity (VAN), which is an early ERP component, constitutes a neural correlate of visual consciousness that is independent of perceptual and cognitive mechanisms. In the present study, we investigated whether VAN is indeed a specific marker of phenomenal awareness or rather reflects the involvement of attention. To this end, we reanalyzed data collected in a previously published EEG experiment in which awareness of visual stimuli and two aspects that define attentional involvement, namely, the inherent saliency and task relevance of a stimulus, were manipulated orthogonally. During the experimental procedure, participants (n = 41) were presented with images of faces that were backward-masked or unmasked, fearful or neutral, and defined as task-relevant targets or task-irrelevant distractors. Single-trial ERP analysis revealed that VAN was highly dependent on attentional manipulations in the early time window (140-200 msec), up to the point that the effect of awareness was not observed for attentionally irrelevant stimuli (i.e., neutral faces presented as distractors). In the late time window (200-350 msec), VAN was present in all attentional conditions, but its amplitude was significantly higher in response to fearful faces and task-relevant face images than in response to neutral ones and task-irrelevant ones, respectively. In conclusion, we demonstrate that the amplitude of VAN is highly dependent on both exogenous (stimulus saliency) and endogenous attention (task requirements). Our results challenge the view that VAN constitutes an attention-independent correlate of phenomenal awareness.
Collapse
Affiliation(s)
- Łucja Doradzińska
- Nencki Institute of Experimental Biology of Polish Academy of Sciences, Warsaw, Poland
| | - Michał Bola
- Centre for Brain Research, Jagiellonian University, Krakow, Poland
| |
Collapse
|
157
|
Mou X, He C, Tan L, Yu J, Liang H, Zhang J, Tian Y, Yang YF, Xu T, Wang Q, Cao M, Chen Z, Hu CP, Wang X, Liu Q, Wu H. ChineseEEG: A Chinese Linguistic Corpora EEG Dataset for Semantic Alignment and Neural Decoding. Sci Data 2024; 11:550. [PMID: 38811613 PMCID: PMC11137001 DOI: 10.1038/s41597-024-03398-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/11/2024] [Accepted: 05/21/2024] [Indexed: 05/31/2024] Open
Abstract
An Electroencephalography (EEG) dataset utilizing rich text stimuli can advance the understanding of how the brain encodes semantic information and contribute to semantic decoding in brain-computer interface (BCI). Addressing the scarcity of EEG datasets featuring Chinese linguistic stimuli, we present the ChineseEEG dataset, a high-density EEG dataset complemented by simultaneous eye-tracking recordings. This dataset was compiled while 10 participants silently read approximately 13 hours of Chinese text from two well-known novels. This dataset provides long-duration EEG recordings, along with pre-processed EEG sensor-level data and semantic embeddings of reading materials extracted by a pre-trained natural language processing (NLP) model. As a pilot EEG dataset derived from natural Chinese linguistic stimuli, ChineseEEG can significantly support research across neuroscience, NLP, and linguistics. It establishes a benchmark dataset for Chinese semantic decoding, aids in the development of BCIs, and facilitates the exploration of alignment between large language models and human cognitive processes. It can also aid research into the brain's mechanisms of language processing within the context of the Chinese natural language.
Collapse
Affiliation(s)
- Xinyu Mou
- Department of Biomedical Engineering, Southern University of Science and Technology, Shenzhen, China
| | - Cuilin He
- Centre for Cognitive and Brain Sciences, Department of Psychology, Faculty of Social Sciences, University of Macau, Taipa, Macau SAR, China
| | - Liwei Tan
- Centre for Cognitive and Brain Sciences, Department of Psychology, Faculty of Social Sciences, University of Macau, Taipa, Macau SAR, China
| | - Junjie Yu
- Department of Biomedical Engineering, Southern University of Science and Technology, Shenzhen, China
| | - Huadong Liang
- AI Research Institute, iFLYTEK Co., LTD, Hefei, China
| | - Jianyu Zhang
- Department of Biomedical Engineering, Southern University of Science and Technology, Shenzhen, China
| | - Yan Tian
- Centre for Cognitive and Brain Sciences, Department of Psychology, Faculty of Social Sciences, University of Macau, Taipa, Macau SAR, China
| | - Yu-Fang Yang
- Division of Experimental Psychology and Neuropsychology, Department of Education and Psychology, Freie Universität Berlin, Berlin, Germany
| | - Ting Xu
- Center for the Integrative Developmental Neuroscience, Child Mind Institute, New York, NY, USA
| | - Qing Wang
- Shanghai Mental Health Center, School of Medicine, Shanghai Jiao Tong University, 600 S. Wanping Rd., Shanghai, 200030, China
| | - Miao Cao
- Australian National Imaging Facility and Swinburne Neuroimaging Facility, Swinburne University of Technology, Victoria, Australia
| | - Zijiao Chen
- Centre for Cognitive and Cognition, Yong Loo Lin School of Medicine, National University of Singapore, Kent Ridge, Singapore
| | - Chuan-Peng Hu
- School of Psychology, Nanjing Normal University, Nanjing, China
| | - Xindi Wang
- Department of Biomedical Engineering, Southern University of Science and Technology, Shenzhen, China
| | - Quanying Liu
- Department of Biomedical Engineering, Southern University of Science and Technology, Shenzhen, China.
| | - Haiyan Wu
- Centre for Cognitive and Brain Sciences, Department of Psychology, Faculty of Social Sciences, University of Macau, Taipa, Macau SAR, China.
| |
Collapse
|
158
|
Nuñez Ponasso G, McSweeney RC, Wartman WA, Lai P, Haueisen J, Maess B, Knösche TR, Weise K, Noetscher GM, Raij T, Makaroff SN. Accuracy of dipole source reconstruction in the 3-layer BEM model against the 5-layer BEM-FMM model. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2024.05.17.594750. [PMID: 38826206 PMCID: PMC11142039 DOI: 10.1101/2024.05.17.594750] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/04/2024]
Abstract
Objective To compare cortical dipole fitting spatial accuracy between the widely used yet highly simplified 3-layer and modern more realistic 5-layer BEM-FMM models with and without adaptive mesh refinement (AMR) methods. Methods We generate simulated noiseless 256-channel EEG data from 5-layer (7-compartment) meshes of 15 subjects from the Connectome Young Adult dataset. For each subject, we test four dipole positions, three sets of conductivity values, and two types of head segmentation. We use the boundary element method (BEM) with fast multipole method (FMM) acceleration, with or without (AMR), for forward modeling. Dipole fitting is carried out with the FieldTrip MATLAB toolbox. Results The average position error (across all tested dipoles, subjects, and models) is ~4 mm, with a standard deviation of ~2 mm. The orientation error is ~20° on average, with a standard deviation of ~15°. Without AMR, the numerical inaccuracies produce a larger disagreement between the 3- and 5-layer models, with an average position error of ~8 mm (6 mm standard deviation), and an orientation error of 28° (28° standard deviation). Conclusions The low-resolution 3-layer models provide excellent accuracy in dipole localization. On the other hand, dipole orientation is retrieved less accurately. Therefore, certain applications may require more realistic models for practical source reconstruction. AMR is a critical component for improving the accuracy of forward EEG computations using a high-resolution 5-layer volume conduction model. Significance Improving EEG source reconstruction accuracy is important for several clinical applications, including epilepsy and other seizure-inducing conditions.
Collapse
Affiliation(s)
- Guillermo Nuñez Ponasso
- Dept. of Electrical and Computer Engineering, Worcester Polytechnic Institute, Worcester, MA, USA
| | - Ryan C. McSweeney
- Dept. of Electrical and Computer Engineering, Worcester Polytechnic Institute, Worcester, MA, USA
| | - William A. Wartman
- Dept. of Electrical and Computer Engineering, Worcester Polytechnic Institute, Worcester, MA, USA
| | - Peiyao Lai
- Dept. of Electrical and Computer Engineering, Worcester Polytechnic Institute, Worcester, MA, USA
| | | | - Burkhard Maess
- Max Plank Insititute for Human Cognitive and Brain Sciences, Leipzig, Germany
| | - Thomas R. Knösche
- Max Plank Insititute for Human Cognitive and Brain Sciences, Leipzig, Germany
| | - Konstantin Weise
- Max Plank Insititute for Human Cognitive and Brain Sciences, Leipzig, Germany
| | - Gregory M. Noetscher
- Dept. of Electrical and Computer Engineering, Worcester Polytechnic Institute, Worcester, MA, USA
| | - Tommi Raij
- Athinoula A. Martinos Center for Biomedical Imaging, Massachusetts General Hospital, Harvard Medical School, Boston, MA, USA
| | - Sergey N. Makaroff
- Dept. of Electrical and Computer Engineering, Worcester Polytechnic Institute, Worcester, MA, USA
- Athinoula A. Martinos Center for Biomedical Imaging, Massachusetts General Hospital, Harvard Medical School, Boston, MA, USA
| |
Collapse
|
159
|
Tong C, Ding Y, Zhang Z, Zhang H, JunLiang Lim K, Guan C. TASA: Temporal Attention With Spatial Autoencoder Network for Odor-Induced Emotion Classification Using EEG. IEEE Trans Neural Syst Rehabil Eng 2024; 32:1944-1954. [PMID: 38722724 DOI: 10.1109/tnsre.2024.3399326] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/21/2024]
Abstract
The olfactory system enables humans to smell different odors, which are closely related to emotions. The high temporal resolution and non-invasiveness of Electroencephalogram (EEG) make it suitable to objectively study human preferences for odors. Effectively learning the temporal dynamics and spatial information from EEG is crucial for detecting odor-induced emotional valence. In this paper, we propose a deep learning architecture called Temporal Attention with Spatial Autoencoder Network (TASA) for predicting odor-induced emotions using EEG. TASA consists of a filter-bank layer, a spatial encoder, a time segmentation layer, a Long Short-Term Memory (LSTM) module, a multi-head self-attention (MSA) layer, and a fully connected layer. We improve upon the previous work by utilizing a two-phase learning framework, using the autoencoder module to learn the spatial information among electrodes by reconstructing the given input with a latent representation in the spatial dimension, which aims to minimize information loss compared to spatial filtering with CNN. The second improvement is inspired by the continuous nature of the olfactory process; we propose to use LSTM-MSA in TASA to capture its temporal dynamics by learning the intercorrelation among the time segments of the EEG. TASA is evaluated on an existing olfactory EEG dataset and compared with several existing deep learning architectures to demonstrate its effectiveness in predicting olfactory-triggered emotional responses. Interpretability analyses with DeepLIFT also suggest that TASA learns spatial-spectral features that are relevant to olfactory-induced emotion recognition.
Collapse
|
160
|
Kwon H, Chinappen DM, Kinard EA, Goodman SK, Huang JF, Berja ED, Walsh KG, Shi W, Manoach DS, Kramer MA, Chu CJ. Impaired sleep-dependent memory consolidation predicted by reduced sleep spindles in Rolandic epilepsy. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2024.05.16.594515. [PMID: 38798414 PMCID: PMC11118409 DOI: 10.1101/2024.05.16.594515] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/29/2024]
Abstract
Background and Objectives Sleep spindles are prominent thalamocortical brain oscillations during sleep that have been mechanistically linked to sleep-dependent memory consolidation in animal models and healthy controls. Sleep spindles are decreased in Rolandic epilepsy and related sleep-activated epileptic encephalopathies. We investigate the relationship between sleep spindle deficits and deficient sleep dependent memory consolidation in children with Rolandic epilepsy. Methods In this prospective case-control study, children were trained and tested on a validated probe of memory consolidation, the motor sequence task (MST). Sleep spindles were measured from high-density EEG during a 90-minute nap opportunity between MST training and testing using a validated automated detector. Results Twenty-three children with Rolandic epilepsy (14 with resolved disease), and 19 age- and sex-matched controls were enrolled. Children with active Rolandic epilepsy had decreased memory consolidation compared to control children (p=0.001, mean percentage reduction: 25.7%, 95% CI [10.3, 41.2]%) and compared to children with resolved Rolandic epilepsy (p=0.007, mean percentage reduction: 21.9%, 95% CI [6.2, 37.6]%). Children with active Rolandic epilepsy had decreased sleep spindle rates in the centrotemporal region compared to controls (p=0.008, mean decrease 2.5 spindles/min, 95% CI [0.7, 4.4] spindles/min). Spindle rate positively predicted sleep-dependent memory consolidation (p=0.004, mean MST improvement of 3.9%, 95% CI [1.3, 6.4]%, for each unit increase in spindles per minute). Discussion Children with Rolandic epilepsy have a sleep spindle deficit during the active period of disease which predicts deficits in sleep dependent memory consolidation. This finding provides a mechanism and noninvasive biomarker to aid diagnosis and therapeutic discovery for cognitive dysfunction in Rolandic epilepsy and related sleep activated epilepsy syndromes.
Collapse
Affiliation(s)
- Hunki Kwon
- Department of Neurology, Massachusetts General Hospital, Boston, Massachusetts, USA
- Harvard Medical School, Boston, Massachusetts, USA
| | - Dhinakaran M. Chinappen
- Department of Neurology, Massachusetts General Hospital, Boston, Massachusetts, USA
- Department of Mathematics and Statistics, Boston University, Boston, Massachusetts, USA
| | - Elizabeth A. Kinard
- Department of Neurology, Massachusetts General Hospital, Boston, Massachusetts, USA
| | - Skyler K. Goodman
- Department of Neurology, Massachusetts General Hospital, Boston, Massachusetts, USA
| | - Jonathan F. Huang
- Department of Neurology, Massachusetts General Hospital, Boston, Massachusetts, USA
- Harvard Medical School, Boston, Massachusetts, USA
| | - Erin D. Berja
- Department of Neurology, Massachusetts General Hospital, Boston, Massachusetts, USA
- Harvard Medical School, Boston, Massachusetts, USA
| | - Katherine G. Walsh
- Department of Neurology, Massachusetts General Hospital, Boston, Massachusetts, USA
- Harvard Medical School, Boston, Massachusetts, USA
| | - Wen Shi
- Department of Neurology, Massachusetts General Hospital, Boston, Massachusetts, USA
- Harvard Medical School, Boston, Massachusetts, USA
| | - Dara S. Manoach
- Harvard Medical School, Boston, Massachusetts, USA
- Department of Psychiatry, Massachusetts General Hospital, Boston, Massachusetts, USA
- Athinoula A. Martinos Center for Biomedical Imaging, Charlestown, Massachusetts, USA
| | - Mark A. Kramer
- Department of Mathematics and Statistics, Boston University, Boston, Massachusetts, USA
- Center for Systems Neuroscience, Boston University, Boston, Massachusetts, USA
| | - Catherine J. Chu
- Department of Neurology, Massachusetts General Hospital, Boston, Massachusetts, USA
- Harvard Medical School, Boston, Massachusetts, USA
| |
Collapse
|
161
|
Geiger M, Hurewitz SR, Pawlowski K, Baumer NT, Wilkinson CL. Alterations in aperiodic and periodic EEG activity in young children with Down syndrome. MEDRXIV : THE PREPRINT SERVER FOR HEALTH SCIENCES 2024:2024.05.01.24306729. [PMID: 38746335 PMCID: PMC11092732 DOI: 10.1101/2024.05.01.24306729] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/16/2024]
Abstract
Down syndrome is the most common cause of intellectual disability, yet little is known about the neurobiological pathways leading to cognitive impairments. Electroencephalographic (EEG) measures are commonly used to study neurodevelopmental disorders, but few studies have focused on young children with DS. Here we assess resting state EEG data collected from toddlers/preschoolers with DS (n=29, age 13-48 months old) and compare their aperiodic and periodic EEG features with both age-matched (n=29) and cognitive-matched (n=58) comparison groups. DS participants exhibited significantly reduced aperiodic slope, increased periodic theta power, and decreased alpha peak amplitude. A majority of DS participants displayed a prominent peak in the theta range, whereas a theta peak was not present in age-matched participants. Overall, similar findings were also observed when comparing DS and cognitive-matched groups, suggesting that EEG differences are not explained by delayed cognitive ability.
Collapse
|
162
|
Hernández D, Puupponen A, Keränen J, Ortega G, Jantunen T. Between bodily action and conventionalized structure: The neural mechanisms of constructed action in sign language comprehension. BRAIN AND LANGUAGE 2024; 252:105413. [PMID: 38608511 DOI: 10.1016/j.bandl.2024.105413] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/06/2023] [Revised: 02/22/2024] [Accepted: 04/07/2024] [Indexed: 04/14/2024]
Abstract
Sign languages (SLs) are expressed through different bodily actions, ranging from re-enactment of physical events (constructed action, CA) to sequences of lexical signs with internal structure (plain telling, PT). Despite the prevalence of CA in signed interactions and its significance for SL comprehension, its neural dynamics remain unexplored. We examined the processing of different types of CA (subtle, reduced, and overt) and PT in 35 adult deaf or hearing native signers. The electroencephalographic-based processing of signed sentences with incongruent targets was recorded. Attenuated N300 and early N400 were observed for CA in deaf but not in hearing signers. No differences were found between sentences with CA types in all signers, suggesting a continuum from PT to overt CA. Deaf signers focused more on body movements; hearing signers on faces. We conclude that CA is processed less effortlessly than PT, arguably because of its strong focus on bodily actions.
Collapse
Affiliation(s)
- Doris Hernández
- Sign Language Centre, Department of Language and Communication, University of Jyväskylä, Finland; Center for Interdisciplinary Brain Research (CIBR), Department of Psychology, University of Jyväskylä, Finland.
| | - Anna Puupponen
- Sign Language Centre, Department of Language and Communication, University of Jyväskylä, Finland
| | - Jarkko Keränen
- Sign Language Centre, Department of Language and Communication, University of Jyväskylä, Finland
| | - Gerardo Ortega
- Department of English Language and Applied Linguistics, University of Birmingham, UK
| | - Tommi Jantunen
- Sign Language Centre, Department of Language and Communication, University of Jyväskylä, Finland
| |
Collapse
|
163
|
Ahlfors SP, Graham S, Bharadwaj H, Mamashli F, Khan S, Joseph RM, Losh A, Pawlyszyn S, McGuiggan NM, Vangel M, Hämäläinen MS, Kenet T. No Differences in Auditory Steady-State Responses in Children with Autism Spectrum Disorder and Typically Developing Children. J Autism Dev Disord 2024; 54:1947-1960. [PMID: 36932270 PMCID: PMC11463296 DOI: 10.1007/s10803-023-05907-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 08/23/2022] [Indexed: 03/19/2023]
Abstract
Auditory steady-state response (ASSR) has been studied as a potential biomarker for abnormal auditory sensory processing in autism spectrum disorder (ASD), with mixed results. Motivated by prior somatosensory findings of group differences in inter-trial coherence (ITC) between ASD and typically developing (TD) individuals at twice the steady-state stimulation frequency, we examined ASSR at 25 and 50 as well as 43 and 86 Hz in response to 25-Hz and 43-Hz auditory stimuli, respectively, using magnetoencephalography. Data were recorded from 22 ASD and 31 TD children, ages 6-17 years. ITC measures showed prominent ASSRs at the stimulation and double frequencies, without significant group differences. These results do not support ASSR as a robust ASD biomarker of abnormal auditory processing in ASD. Furthermore, the previously observed atypical double-frequency somatosensory response in ASD did not generalize to the auditory modality. Thus, the hypothesis about modality-independent abnormal local connectivity in ASD was not supported.
Collapse
Affiliation(s)
- Seppo P Ahlfors
- Athinoula A. Martinos Center for Biomedical Imaging, Massachusetts General Hospital, Charlestown, MA, USA.
- Department of Radiology, Harvard Medical School, Massachusetts General Hospital, Boston, MA, USA.
- Athinoula A. Martinos Center for Biomedical Imaging, Massachusetts General Hospital, 149 13th Street, Rm. 2301, Charlestown, MA, 02129, USA.
| | - Steven Graham
- Department of Neurology, Harvard Medical School, Massachusetts General Hospital, Boston, MA, USA
| | - Hari Bharadwaj
- Department of Neurology, Harvard Medical School, Massachusetts General Hospital, Boston, MA, USA
- Department of Speech, Language, and Hearing Sciences, Boston University, Boston, MA, USA
- Department of Speech, Language, & Hearing Sciences and Weldon School of Biomedical Engineering, Purdue University, West Lafayette, IN, USA
| | - Fahimeh Mamashli
- Athinoula A. Martinos Center for Biomedical Imaging, Massachusetts General Hospital, Charlestown, MA, USA
- Department of Radiology, Harvard Medical School, Massachusetts General Hospital, Boston, MA, USA
- Department of Neurology, Harvard Medical School, Massachusetts General Hospital, Boston, MA, USA
| | - Sheraz Khan
- Athinoula A. Martinos Center for Biomedical Imaging, Massachusetts General Hospital, Charlestown, MA, USA
- Department of Radiology, Harvard Medical School, Massachusetts General Hospital, Boston, MA, USA
- Department of Neurology, Harvard Medical School, Massachusetts General Hospital, Boston, MA, USA
| | - Robert M Joseph
- Department of Anatomy and Neurobiology, Boston University School of Medicine, Boston, MA, USA
| | - Ainsley Losh
- Department of Neurology, Harvard Medical School, Massachusetts General Hospital, Boston, MA, USA
| | - Stephanie Pawlyszyn
- Department of Neurology, Harvard Medical School, Massachusetts General Hospital, Boston, MA, USA
| | - Nicole M McGuiggan
- Department of Neurology, Harvard Medical School, Massachusetts General Hospital, Boston, MA, USA
| | - Mark Vangel
- Athinoula A. Martinos Center for Biomedical Imaging, Massachusetts General Hospital, Charlestown, MA, USA
- Department of Radiology, Harvard Medical School, Massachusetts General Hospital, Boston, MA, USA
| | - Matti S Hämäläinen
- Athinoula A. Martinos Center for Biomedical Imaging, Massachusetts General Hospital, Charlestown, MA, USA
- Department of Radiology, Harvard Medical School, Massachusetts General Hospital, Boston, MA, USA
| | - Tal Kenet
- Athinoula A. Martinos Center for Biomedical Imaging, Massachusetts General Hospital, Charlestown, MA, USA
- Department of Neurology, Harvard Medical School, Massachusetts General Hospital, Boston, MA, USA
| |
Collapse
|
164
|
Yu Y, Oh Y, Kounios J, Beeman M. Electroencephalography Spectral-power Volatility Predicts Problem-solving Outcomes. J Cogn Neurosci 2024; 36:901-915. [PMID: 38437171 PMCID: PMC11697640 DOI: 10.1162/jocn_a_02136] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/06/2024]
Abstract
Temporal variability is a fundamental property of brain processes and is functionally important to human cognition. This study examined how fluctuations in neural oscillatory activity are related to problem-solving performance as one example of how temporal variability affects high-level cognition. We used volatility to assess step-by-step fluctuations of EEG spectral power while individuals attempted to solve word-association puzzles. Inspired by recent results with hidden-state modeling, we tested the hypothesis that spectral-power volatility is directly associated with problem-solving outcomes. As predicted, volatility was lower during trials solved with insight compared with those solved analytically. Moreover, volatility during prestimulus preparation for problem-solving predicted solving outcomes, including solving success and solving time. These novel findings were replicated in a separate data set from an anagram-solving task, suggesting that less-rapid transitions between neural oscillatory synchronization and desynchronization predict better solving performance and are conducive to solving with insight for these types of problems. Thus, volatility can be a valuable index of cognition-related brain dynamics.
Collapse
Affiliation(s)
- Yuhua Yu
- Department of Psychology, Northwestern University, Evanston, IL 60208
| | - Yongtaek Oh
- Department of Psychological and Brain Sciences, Drexel University, Philadelphia, PA 19104
| | - John Kounios
- Department of Psychological and Brain Sciences, Drexel University, Philadelphia, PA 19104
| | - Mark Beeman
- Department of Psychology, Northwestern University, Evanston, IL 60208
| |
Collapse
|
165
|
Solomon EA, Wang JB, Oya H, Howard MA, Trapp NT, Uitermarkt BD, Boes AD, Keller CJ. TMS provokes target-dependent intracranial rhythms across human cortical and subcortical sites. Brain Stimul 2024; 17:698-712. [PMID: 38821396 PMCID: PMC11313454 DOI: 10.1016/j.brs.2024.05.014] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/24/2023] [Revised: 05/25/2024] [Accepted: 05/26/2024] [Indexed: 06/02/2024] Open
Abstract
BACKGROUND Transcranial magnetic stimulation (TMS) is believed to alter ongoing neural activity and cause circuit-level changes in brain function. While the electrophysiological effects of TMS have been extensively studied with scalp electroencephalography (EEG), this approach generally evaluates low-frequency neural activity at the cortical surface. However, TMS can be safely used in patients with intracranial electrodes (iEEG), allowing for direct assessment of deeper and more localized oscillatory responses across the frequency spectrum. OBJECTIVE/HYPOTHESIS Our study used iEEG to understand the effects of TMS on human neural activity in the spectral domain. We asked (1) which brain regions respond to cortically-targeted TMS, and in what frequency bands, (2) whether deeper brain structures exhibit oscillatory responses, and (3) whether the neural responses to TMS reflect evoked versus induced oscillations. METHODS We recruited 17 neurosurgical patients with indwelling electrodes and recorded neural activity while patients underwent repeated trials of single-pulse TMS at either the dorsolateral prefrontal cortex (DLPFC) or parietal cortex. iEEG signals were analyzed using spectral methods to understand the oscillatory responses to TMS. RESULTS Stimulation to DLPFC drove widespread low-frequency increases (3-8 Hz) in frontolimbic cortices and high-frequency decreases (30-110 Hz) in frontotemporal areas, including the hippocampus. Stimulation to parietal cortex specifically provoked low-frequency responses in the medial temporal lobe. While most low-frequency activity was consistent with phase-locked evoked responses, anterior frontal regions exhibited induced theta oscillations following DLPFC stimulation. CONCLUSIONS By combining TMS with intracranial EEG recordings, our results suggest that TMS is an effective means to perturb oscillatory neural activity in brain-wide networks, including deeper structures not directly accessed by stimulation itself.
Collapse
Affiliation(s)
- Ethan A Solomon
- Dept. of Psychiatry and Behavioral Sciences, Stanford University Medical Center, Palo Alto, 94305, CA, USA; Wu Tsai Neurosciences Institute, Stanford University, Stanford, 94305, CA, USA.
| | - Jeffrey B Wang
- Dept. of Psychiatry and Behavioral Sciences, Stanford University Medical Center, Palo Alto, 94305, CA, USA; Biophysics Graduate Program, Stanford University Medical Center, Stanford, 94305, CA, USA
| | - Hiroyuki Oya
- Department of Neurosurgery, Carver College of Medicine, University of Iowa, Iowa City, 52242, IA, USA
| | - Matthew A Howard
- Department of Neurosurgery, Carver College of Medicine, University of Iowa, Iowa City, 52242, IA, USA
| | - Nicholas T Trapp
- Department of Neurology, Carver College of Medicine, University of Iowa, Iowa City, 52242, IA, USA; Department of Psychiatry, Carver College of Medicine, University of Iowa, Iowa City, 52242, IA, USA
| | - Brandt D Uitermarkt
- Department of Pediatrics, Carver College of Medicine, University of Iowa, Iowa City, 52242, IA, USA
| | - Aaron D Boes
- Department of Neurology, Carver College of Medicine, University of Iowa, Iowa City, 52242, IA, USA; Department of Psychiatry, Carver College of Medicine, University of Iowa, Iowa City, 52242, IA, USA; Department of Pediatrics, Carver College of Medicine, University of Iowa, Iowa City, 52242, IA, USA
| | - Corey J Keller
- Dept. of Psychiatry and Behavioral Sciences, Stanford University Medical Center, Palo Alto, 94305, CA, USA; Veterans Affairs Palo Alto Healthcare System, and the Sierra Pacific Mental Illness, Research, Education, and Clinical Center (MIRECC), Palo Alto, 94305, CA, USA; Wu Tsai Neurosciences Institute, Stanford University, Stanford, 94305, CA, USA
| |
Collapse
|
166
|
Renton AI, Dao TT, Johnstone T, Civier O, Sullivan RP, White DJ, Lyons P, Slade BM, Abbott DF, Amos TJ, Bollmann S, Botting A, Campbell MEJ, Chang J, Close TG, Dörig M, Eckstein K, Egan GF, Evas S, Flandin G, Garner KG, Garrido MI, Ghosh SS, Grignard M, Halchenko YO, Hannan AJ, Heinsfeld AS, Huber L, Hughes ME, Kaczmarzyk JR, Kasper L, Kuhlmann L, Lou K, Mantilla-Ramos YJ, Mattingley JB, Meier ML, Morris J, Narayanan A, Pestilli F, Puce A, Ribeiro FL, Rogasch NC, Rorden C, Schira MM, Shaw TB, Sowman PF, Spitz G, Stewart AW, Ye X, Zhu JD, Narayanan A, Bollmann S. Neurodesk: an accessible, flexible and portable data analysis environment for reproducible neuroimaging. Nat Methods 2024; 21:804-808. [PMID: 38191935 PMCID: PMC11180540 DOI: 10.1038/s41592-023-02145-x] [Citation(s) in RCA: 13] [Impact Index Per Article: 13.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/02/2023] [Accepted: 11/27/2023] [Indexed: 01/10/2024]
Abstract
Neuroimaging research requires purpose-built analysis software, which is challenging to install and may produce different results across computing environments. The community-oriented, open-source Neurodesk platform ( https://www.neurodesk.org/ ) harnesses a comprehensive and growing suite of neuroimaging software containers. Neurodesk includes a browser-accessible virtual desktop, command-line interface and computational notebook compatibility, allowing for accessible, flexible, portable and fully reproducible neuroimaging analysis on personal workstations, high-performance computers and the cloud.
Collapse
Affiliation(s)
- Angela I Renton
- The University of Queensland, Queensland Brain Institute, St Lucia, Brisbane, Queensland, Australia.
- The University of Queensland, School of Electrical Engineering and Computer Science, St Lucia, Brisbane, Queensland, Australia.
| | - Thuy T Dao
- The University of Queensland, School of Electrical Engineering and Computer Science, St Lucia, Brisbane, Queensland, Australia
| | - Tom Johnstone
- Centre for Mental Health & Brain Sciences, Swinburne University of Technology, Hawthorn, Victoria, Australia
| | - Oren Civier
- Centre for Mental Health & Brain Sciences, Swinburne University of Technology, Hawthorn, Victoria, Australia
| | - Ryan P Sullivan
- The University of Sydney, School of Biomedical Engineering, Sydney, New South Wales, Australia
| | - David J White
- Centre for Mental Health & Brain Sciences, Swinburne University of Technology, Hawthorn, Victoria, Australia
| | - Paris Lyons
- Centre for Mental Health & Brain Sciences, Swinburne University of Technology, Hawthorn, Victoria, Australia
| | - Benjamin M Slade
- Centre for Mental Health & Brain Sciences, Swinburne University of Technology, Hawthorn, Victoria, Australia
| | - David F Abbott
- The Florey Institute of Neuroscience and Mental Health, The University of Melbourne, Melbourne, Victoria, Australia
| | - Toluwani J Amos
- School of Life Science and Technology, University of Electronic Science and Technology, Chengdu, China
| | - Saskia Bollmann
- The University of Queensland, School of Electrical Engineering and Computer Science, St Lucia, Brisbane, Queensland, Australia
| | - Andy Botting
- Australian Research Data Commons (ARDC), Sydney, New South Wales, Australia
| | - Megan E J Campbell
- School of Psychological Sciences, University of Newcastle, Newcastle, New South Wales, Australia
- Hunter Medical Research Institute Imaging Centre, Newcastle, New South Wales, Australia
| | - Jeryn Chang
- The University of Queensland, School of Biomedical Sciences, St Lucia, Brisbane, Queensland, Australia
| | - Thomas G Close
- The University of Sydney, School of Biomedical Engineering, Sydney, New South Wales, Australia
| | - Monika Dörig
- Integrative Spinal Research, Department of Chiropractic Medicine, Balgrist University Hospital, University of Zurich, Zurich, Switzerland
| | - Korbinian Eckstein
- The University of Queensland, School of Electrical Engineering and Computer Science, St Lucia, Brisbane, Queensland, Australia
| | - Gary F Egan
- The Turner Institute for Brain and Mental Health, School of Psychological Sciences, Monash University, Melbourne, Victoria, Australia
- Monash Biomedical Imaging, Monash University, Melbourne, Victoria, Australia
| | - Stefanie Evas
- School of Psychology, University of Adelaide, Adelaide, South Australia, Australia
- Human Health, Health & Biosecurity, CSIRO, Adelaide, South Australia, Australia
| | - Guillaume Flandin
- Wellcome Centre for Human Neuroimaging, University College London, London, UK
| | - Kelly G Garner
- School of Psychology, University of New South Wales, Sydney, New South Wales, Australia
- The University of Queensland, School of Psychology, St Lucia, Brisbane, Queensland, Australia
| | - Marta I Garrido
- Melbourne School of Psychological Sciences, he University of Melbourne, Melbourne, Victoria, Australia
- Graeme Clark Institute for Biomedical Engineering, The University of Melbourne, Melbourne, Victoria, Australia
| | - Satrajit S Ghosh
- McGovern Institute for Brain Research, Massachusetts Institute of Technology, Cambridge, MA, USA
- Department of Otolaryngology - Head and Neck Surgery, Harvard Medical School, Boston, MA, USA
| | - Martin Grignard
- GIGA CRC In-Vivo Imaging, University of Liège, Liège, Belgium
| | - Yaroslav O Halchenko
- Center for Open Neuroscience, Department of Psychological and Brain Sciences, Dartmouth College, Hanover, NH, USA
| | - Anthony J Hannan
- The Florey Institute of Neuroscience and Mental Health, The University of Melbourne, Melbourne, Victoria, Australia
| | - Anibal S Heinsfeld
- Department of Psychology, Center for Perceptual Systems, Institute for Neuroscience, Center For Learning and Memory, The University of Texas at Austin, Austin, TX, USA
| | - Laurentius Huber
- National Institute of Mental Health (NIMH), National Institutes Health, Bethesda, MD, USA
| | - Matthew E Hughes
- Centre for Mental Health & Brain Sciences, Swinburne University of Technology, Hawthorn, Victoria, Australia
| | - Jakub R Kaczmarzyk
- Department of Biomedical Informatics, Stony Brook University, New York, NY, USA
- Simons Center for Quantitative Biology, Cold Spring Harbor Laboratory, New York, NY, USA
| | - Lars Kasper
- BRAIN-TO Lab, Krembil Brain Institute, University Health Network, Toronto, Ontario, Canada
- Translational Neuromodeling Unit, Institute for Biomedical Engineering, University of Zurich and ETH Zurich, Zurich, Switzerland
| | - Levin Kuhlmann
- Department of Data Science and AI, Faculty of Information Technology, Monash University, Melbourne, Victoria, Australia
| | - Kexin Lou
- The University of Queensland, School of Electrical Engineering and Computer Science, St Lucia, Brisbane, Queensland, Australia
- Department of Biomedical Engineering, Southern University of Science and Technology, Shenzhen, China
| | - Yorguin-Jose Mantilla-Ramos
- Grupo Neuropsicología y Conducta (GRUNECO), Facultad de Medicina, Universidad de Antioquia, Medellín, Colombia
| | - Jason B Mattingley
- The University of Queensland, Queensland Brain Institute, St Lucia, Brisbane, Queensland, Australia
- The University of Queensland, School of Psychology, St Lucia, Brisbane, Queensland, Australia
| | - Michael L Meier
- Integrative Spinal Research, Department of Chiropractic Medicine, Balgrist University Hospital, University of Zurich, Zurich, Switzerland
| | - Jo Morris
- Australian Research Data Commons (ARDC), Sydney, New South Wales, Australia
| | - Akshaiy Narayanan
- School of Computer Science, The University of Auckland, Auckland, New Zealand
| | - Franco Pestilli
- Department of Psychology, Center for Perceptual Systems, Institute for Neuroscience, Center For Learning and Memory, The University of Texas at Austin, Austin, TX, USA
| | - Aina Puce
- Department of Psychological and Brain Sciences, Indiana University, Bloomington, IN, USA
| | - Fernanda L Ribeiro
- The University of Queensland, School of Electrical Engineering and Computer Science, St Lucia, Brisbane, Queensland, Australia
| | - Nigel C Rogasch
- The Turner Institute for Brain and Mental Health, School of Psychological Sciences, Monash University, Melbourne, Victoria, Australia
- Discipline of Psychiatry, Adelaide Medical School, University of Adelaide, Adelaide, South Australia, Australia
- Hopwood Centre for Neurobiology, Lifelong Health Theme, South Australian Health and Medical Research Institute (SAHMRI), Adelaide, South Australia, Australia
| | - Chris Rorden
- McCausland Center for Brain Imaging, Department of Psychology, University of South Carolina, Columbia, SC, USA
| | - Mark M Schira
- School of Psychology, University of Wollongong, Wollongong, New South Wales, Australia
| | - Thomas B Shaw
- The University of Queensland, School of Electrical Engineering and Computer Science, St Lucia, Brisbane, Queensland, Australia
- The University of Queensland, Centre for Advanced Imaging, St Lucia, Brisbane, Queensland, Australia
- Department of Neurology, Royal Brisbane and Women's Hospital, Brisbane, Queensland, Australia
| | - Paul F Sowman
- Macquarie University, School of Psychological Sciences, Sydney, New South Wales, Australia
| | - Gershon Spitz
- Department of Neuroscience, Central Clinical School, Faculty of Medicine, Nursing and Health Sciences, Monash University, Melbourne, Victoria, Australia
- Monash-Epworth Rehabilitation Research Centre, Turner Institute for Brain and Mental Health, School of Psychological Sciences, Monash University, Melbourne, Victoria, Australia
| | - Ashley W Stewart
- The University of Queensland, School of Electrical Engineering and Computer Science, St Lucia, Brisbane, Queensland, Australia
- ARC Training Centre for Innovation in Biomedical Imaging Technology, The University of Queensland, Brisbane, Queensland, Australia
| | - Xincheng Ye
- The University of Queensland, School of Electrical Engineering and Computer Science, St Lucia, Brisbane, Queensland, Australia
| | - Judy D Zhu
- Macquarie University, School of Psychological Sciences, Sydney, New South Wales, Australia
| | - Aswin Narayanan
- The University of Queensland, Centre for Advanced Imaging, St Lucia, Brisbane, Queensland, Australia
| | - Steffen Bollmann
- The University of Queensland, School of Electrical Engineering and Computer Science, St Lucia, Brisbane, Queensland, Australia.
- The University of Queensland, Centre for Advanced Imaging, St Lucia, Brisbane, Queensland, Australia.
- ARC Training Centre for Innovation in Biomedical Imaging Technology, The University of Queensland, Brisbane, Queensland, Australia.
- Queensland Digital Health Centre, The University of Queensland, Brisbane, Queensland, Australia.
| |
Collapse
|
167
|
Lankinen K, Ahveninen J, Jas M, Raij T, Ahlfors SP. Neuronal Modeling of Cross-Sensory Visual Evoked Magnetoencephalography Responses in the Auditory Cortex. J Neurosci 2024; 44:e1119232024. [PMID: 38508715 PMCID: PMC11044114 DOI: 10.1523/jneurosci.1119-23.2024] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/16/2023] [Revised: 02/13/2024] [Accepted: 02/14/2024] [Indexed: 03/22/2024] Open
Abstract
Previous studies have demonstrated that auditory cortex activity can be influenced by cross-sensory visual inputs. Intracortical laminar recordings in nonhuman primates have suggested a feedforward (FF) type profile for auditory evoked but feedback (FB) type for visual evoked activity in the auditory cortex. To test whether cross-sensory visual evoked activity in the auditory cortex is associated with FB inputs also in humans, we analyzed magnetoencephalography (MEG) responses from eight human subjects (six females) evoked by simple auditory or visual stimuli. In the estimated MEG source waveforms for auditory cortex regions of interest, auditory evoked response showed peaks at 37 and 90 ms and visual evoked response at 125 ms. The inputs to the auditory cortex were modeled through FF- and FB-type connections targeting different cortical layers using the Human Neocortical Neurosolver (HNN), which links cellular- and circuit-level mechanisms to MEG signals. HNN modeling suggested that the experimentally observed auditory response could be explained by an FF input followed by an FB input, whereas the cross-sensory visual response could be adequately explained by just an FB input. Thus, the combined MEG and HNN results support the hypothesis that cross-sensory visual input in the auditory cortex is of FB type. The results also illustrate how the dynamic patterns of the estimated MEG source activity can provide information about the characteristics of the input into a cortical area in terms of the hierarchical organization among areas.
Collapse
Affiliation(s)
- Kaisu Lankinen
- Athinoula A. Martinos Center for Biomedical Imaging, Massachusetts General Hospital, Charlestown, Massachusetts 02129
- Department of Radiology, Harvard Medical School, Boston, Massachusetts 02115
| | - Jyrki Ahveninen
- Athinoula A. Martinos Center for Biomedical Imaging, Massachusetts General Hospital, Charlestown, Massachusetts 02129
- Department of Radiology, Harvard Medical School, Boston, Massachusetts 02115
| | - Mainak Jas
- Athinoula A. Martinos Center for Biomedical Imaging, Massachusetts General Hospital, Charlestown, Massachusetts 02129
- Department of Radiology, Harvard Medical School, Boston, Massachusetts 02115
| | - Tommi Raij
- Athinoula A. Martinos Center for Biomedical Imaging, Massachusetts General Hospital, Charlestown, Massachusetts 02129
- Department of Radiology, Harvard Medical School, Boston, Massachusetts 02115
| | - Seppo P Ahlfors
- Athinoula A. Martinos Center for Biomedical Imaging, Massachusetts General Hospital, Charlestown, Massachusetts 02129
- Department of Radiology, Harvard Medical School, Boston, Massachusetts 02115
| |
Collapse
|
168
|
Pirrung CJH, Singh G, Hogeveen J, Quinn D, Cavanagh JF. Hypoactivation of ventromedial frontal cortex in major depressive disorder: an MEG study of the Reward Positivity. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2024.04.18.590159. [PMID: 38712114 PMCID: PMC11071387 DOI: 10.1101/2024.04.18.590159] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/08/2024]
Abstract
Background The Reward Positivity (RewP) is sensitive and specific electrophysiological marker of reward receipt. These characteristics make it a compelling candidate marker of dysfunctional reward processing in major depressive disorder. We previously proposed that the RewP is a nexus of multiple aspects of reward variance, and that a diminished RewP in depression might only reflect a deficit in some of this variance. Specifically, we predicted a diminished ventromedial contribution in depression in the context of maintained reward learning. Methods Here we collected magnetoencephalographic (MEG) recordings of reward receipt in 43 individuals with major depressive disorder (MDD group) and 38 healthy controls (CTL group). MEG allows effective source estimation due to the absence of volume conduction that compromises electroencephalographic recordings. Results The MEG RewP analogue was generated by a broad set of cortical areas, yet only right ventromedial and right ventral temporal areas were diminished in MDD. These areas correlated with a principal component of anhedonia derived from multiple questionnaires. Compellingly, BA25 was the frontal region with the largest representation in both of these effects. Conclusions These findings not only advance our understanding underlying the computation of the RewP, but they also dovetail with convergent findings from other types of functional source imaging in depression, as well as from deep brain stimulation treatments. Together, these discoveries suggest that the RewP may be a valuable marker for objective assessment of reward affect and its disruption in major depression.
Collapse
|
169
|
Bosseler AN, Meltzoff AN, Bierer S, Huber E, Mizrahi JC, Larson E, Endevelt-Shapira Y, Taulu S, Kuhl PK. Infants' brain responses to social interaction predict future language growth. Curr Biol 2024; 34:1731-1738.e3. [PMID: 38593800 PMCID: PMC11090161 DOI: 10.1016/j.cub.2024.03.020] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/15/2023] [Revised: 02/26/2024] [Accepted: 03/13/2024] [Indexed: 04/11/2024]
Abstract
In face-to-face interactions with infants, human adults exhibit a species-specific communicative signal. Adults present a distinctive "social ensemble": they use infant-directed speech (parentese), respond contingently to infants' actions and vocalizations, and react positively through mutual eye-gaze and smiling. Studies suggest that this social ensemble is essential for initial language learning. Our hypothesis is that the social ensemble attracts attentional systems to speech and that sensorimotor systems prepare infants to respond vocally, both of which advance language learning. Using infant magnetoencephalography (MEG), we measure 5-month-old infants' neural responses during live verbal face-to-face (F2F) interaction with an adult (social condition) and during a control (nonsocial condition) in which the adult turns away from the infant to speak to another person. Using a longitudinal design, we tested whether infants' brain responses to these conditions at 5 months of age predicted their language growth at five future time points. Brain areas involved in attention (right hemisphere inferior frontal, right hemisphere superior temporal, and right hemisphere inferior parietal) show significantly higher theta activity in the social versus nonsocial condition. Critical to theory, we found that infants' neural activity in response to F2F interaction in attentional and sensorimotor regions significantly predicted future language development into the third year of life, more than 2 years after the initial measurements. We develop a view of early language acquisition that underscores the centrality of the social ensemble, and we offer new insight into the neurobiological components that link infants' language learning to their early brain functioning during social interaction.
Collapse
Affiliation(s)
- Alexis N Bosseler
- Institute for Learning & Brain Sciences, University of Washington, Seattle, WA 98195, USA
| | - Andrew N Meltzoff
- Institute for Learning & Brain Sciences, University of Washington, Seattle, WA 98195, USA; Department of Psychology, University of Washington, Seattle, WA 98195, USA
| | - Steven Bierer
- Institute for Learning & Brain Sciences, University of Washington, Seattle, WA 98195, USA
| | - Elizabeth Huber
- Institute for Learning & Brain Sciences, University of Washington, Seattle, WA 98195, USA; Department of Speech and Hearing Sciences, University of Washington, Seattle, WA 98195, USA
| | - Julia C Mizrahi
- Institute for Learning & Brain Sciences, University of Washington, Seattle, WA 98195, USA
| | - Eric Larson
- Institute for Learning & Brain Sciences, University of Washington, Seattle, WA 98195, USA
| | - Yaara Endevelt-Shapira
- Institute for Learning & Brain Sciences, University of Washington, Seattle, WA 98195, USA
| | - Samu Taulu
- Institute for Learning & Brain Sciences, University of Washington, Seattle, WA 98195, USA; Department of Physics, University of Washington, Seattle, WA 98195, USA
| | - Patricia K Kuhl
- Institute for Learning & Brain Sciences, University of Washington, Seattle, WA 98195, USA; Department of Speech and Hearing Sciences, University of Washington, Seattle, WA 98195, USA.
| |
Collapse
|
170
|
Moitra S, Chacón DA, Stockall L. How long is long? Word length effects in reading correspond to minimal graphemic units: An MEG study in Bangla. PLoS One 2024; 19:e0292979. [PMID: 38635827 PMCID: PMC11034978 DOI: 10.1371/journal.pone.0292979] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/31/2023] [Accepted: 02/20/2024] [Indexed: 04/20/2024] Open
Abstract
This paper presents a magnetoencephalography (MEG) study on reading in Bangla, an east Indo-Aryan language predominantly written in an abugida script. The study aims to uncover how visual stimuli are processed and mapped onto abstract linguistic representations in the brain. Specifically, we investigate the neural responses that correspond to word length in Bangla, a language with a unique orthography that introduces multiple ways to measure word length. Our results show that MEG signals localised in the anterior left fusiform gyrus, at around 130ms, are highly correlated with word length when measured in terms of the number of minimal graphemic units in the word rather than independent graphemic units (akśar) or phonemes. Our findings suggest that minimal graphemic units could serve as a suitable metric for measuring word length in non-alphabetic orthographies such as Bangla.
Collapse
Affiliation(s)
- Swarnendu Moitra
- Department of Linguistics, Queen Mary University of London, London, United Kingdom
| | - Dustin A. Chacón
- Department of Linguistics, University of Georgia, Athens, Georgia, United States of America
- Neuroscience of Language Lab, New York University Abu Dhabi, Abu Dhabi, United Arab Emirates
| | - Linnaea Stockall
- Department of Linguistics, Queen Mary University of London, London, United Kingdom
| |
Collapse
|
171
|
EskandariNasab M, Raeisi Z, Lashaki RA, Najafi H. A GRU-CNN model for auditory attention detection using microstate and recurrence quantification analysis. Sci Rep 2024; 14:8861. [PMID: 38632246 PMCID: PMC11024110 DOI: 10.1038/s41598-024-58886-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/12/2024] [Accepted: 04/04/2024] [Indexed: 04/19/2024] Open
Abstract
Attention as a cognition ability plays a crucial role in perception which helps humans to concentrate on specific objects of the environment while discarding others. In this paper, auditory attention detection (AAD) is investigated using different dynamic features extracted from multichannel electroencephalography (EEG) signals when listeners attend to a target speaker in the presence of a competing talker. To this aim, microstate and recurrence quantification analysis are utilized to extract different types of features that reflect changes in the brain state during cognitive tasks. Then, an optimized feature set is determined by employing the processes of significant feature selection based on classification performance. The classifier model is developed by hybrid sequential learning that employs Gated Recurrent Units (GRU) and Convolutional Neural Network (CNN) into a unified framework for accurate attention detection. The proposed AAD method shows that the selected feature set achieves the most discriminative features for the classification process. Also, it yields the best performance as compared with state-of-the-art AAD approaches from the literature in terms of various measures. The current study is the first to validate the use of microstate and recurrence quantification parameters to differentiate auditory attention using reinforcement learning without access to stimuli.
Collapse
Affiliation(s)
| | - Zahra Raeisi
- Department of Computer Science, University of Fairleigh Dickinson, Vancouver Campus, Vancouver, Canada
| | - Reza Ahmadi Lashaki
- Department of Computer Engineering, Faculty of Electrical and Computer Engineering, University of Tabriz, Tabriz, Iran
| | - Hamidreza Najafi
- Biomedical Engineering Department, School of Electrical Engineering, Iran University of Science and Technology, Tehran, Iran
| |
Collapse
|
172
|
Seijdel N, Stolwijk G, Janicas B, Snell J, Meeter M. Explaining the Sentence Superiority Effect and N400s Elicited by Words and Short Sentences with OB1-Reader. J Cogn 2024; 7:34. [PMID: 38638462 PMCID: PMC11025567 DOI: 10.5334/joc.358] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/01/2023] [Accepted: 03/26/2024] [Indexed: 04/20/2024] Open
Abstract
Research into reading has benefitted from the emergence of powerful computational models that account for reading behavior at different levels. Such models become more powerful when the underlying anatomy, architecture or 'physiology' can be linked to the behavior of interest. OB1-reader is a reading model that simulates the processes underlying reading in the human brain. Previous studies showed that OB1-reader can account for various phenomena in the word recognition and text reading literatures. Here we aim to extend OB1's scope, by simulating behavioral performance and evoked EEG activity for two experimental word-recognition tasks: a flanker task in which unrelated flankers generated less accurate responses combined with a larger N400, and a sentence reading task in which words were recognized more accurately at central positions and within intact sentences, than at peripheral positions and in scrambled sentences. OB1 simulated several behavioral findings in both paradigms, including the so-called sentence superiority effect. Moreover, virtual event-related potentials (ERPs) generated from node activity in OB1 were compared to human ERPs. More lexical activity in OB1 predicted the size of the N400 component of human readers in both experiments, but not the N250.
Collapse
Affiliation(s)
- Noor Seijdel
- Department of Educational and Family studies, Vrije Universiteit Amsterdam, Amsterdam, the Netherlands
- LEARN! Research Institute, Vrije Universiteit Amsterdam, the Netherlands
| | - Gina Stolwijk
- Department of Educational and Family studies, Vrije Universiteit Amsterdam, Amsterdam, the Netherlands
| | - Beatriz Janicas
- Department of Experimental and Applied Psychology, Vrije Universiteit Amsterdam, Amsterdam, the Netherlands
| | - Joshua Snell
- Department of Experimental and Applied Psychology, Vrije Universiteit Amsterdam, Amsterdam, the Netherlands
- Institute of Brain and Behavior Amsterdam (iBBA), Amsterdam, the Netherlands
| | - Martijn Meeter
- Department of Educational and Family studies, Vrije Universiteit Amsterdam, Amsterdam, the Netherlands
- LEARN! Research Institute, Vrije Universiteit Amsterdam, the Netherlands
| |
Collapse
|
173
|
Li Y, Pazdera JK, Kahana MJ. EEG decoders track memory dynamics. Nat Commun 2024; 15:2981. [PMID: 38582783 PMCID: PMC10998865 DOI: 10.1038/s41467-024-46926-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/19/2021] [Accepted: 03/14/2024] [Indexed: 04/08/2024] Open
Abstract
Encoding- and retrieval-related neural activity jointly determine mnemonic success. We ask whether electroencephalographic activity can reliably predict encoding and retrieval success on individual trials. Each of 98 participants performed a delayed recall task on 576 lists across 24 experimental sessions. Logistic regression classifiers trained on spectral features measured immediately preceding spoken recall of individual words successfully predict whether or not those words belonged to the target list. Classifiers trained on features measured during word encoding also reliably predict whether those words will be subsequently recalled and further predict the temporal and semantic organization of the recalled items. These findings link neural variability predictive of successful memory with item-to-context binding, a key cognitive process thought to underlie episodic memory function.
Collapse
Affiliation(s)
- Yuxuan Li
- Department of Psychology, University of Pennsylvania, Philadelphia, PA, USA
- Department of Psychology, Stanford University, Stanford, CA, USA
| | - Jesse K Pazdera
- Department of Psychology, University of Pennsylvania, Philadelphia, PA, USA
- Department of Psychology, Neuroscience & Behaviour, McMaster University, Hamilton, ON, Canada
| | - Michael J Kahana
- Department of Psychology, University of Pennsylvania, Philadelphia, PA, USA.
| |
Collapse
|
174
|
Candelaria-Cook FT, Schendel ME, Romero LL, Cerros C, Hill DE, Stephen JM. Sex-specific Differences in Resting Oscillatory Dynamics in Children with Prenatal Alcohol Exposure. Neuroscience 2024; 543:121-136. [PMID: 38387734 PMCID: PMC10954390 DOI: 10.1016/j.neuroscience.2024.02.016] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/04/2023] [Revised: 02/13/2024] [Accepted: 02/16/2024] [Indexed: 02/24/2024]
Abstract
At rest children with prenatal alcohol exposure (PAE) exhibit impaired static and dynamic functional connectivity, along with decreased alpha oscillations. Sex-specific information regarding the impact of PAE on whole-brain resting-state gamma spectral power remains unknown. Eyes-closed and eyes-open MEG resting-state data were examined in 83 children, ages 6-13 years of age. Using a matched design, the sample consisted of 42 typically developing children (TDC) (22 males/20 females) and 41 children with PAE and/or a fetal alcohol spectrum disorders (FASD) diagnosis (21 males/20 females). Whole-brain source resting-state spectral power was examined to determine group and sex specific relationships. Within gamma, we found sex and group specific changes such that female participants with PAE/FASD had increased gamma power when compared to female TDC and male participants with PAE/FASD. These differences were detected in most source regions analyzed during both resting-states, and were observed across the age spectrum examined. Within delta, we found sex and group specific changes such that female participants with PAE/FASD had decreased delta power when compared to female TDC and male participants with PAE/FASD. The reduced delta oscillations in female participants with PAE/FASD were detected in several source regions during eyes-closed rest and were evident at younger ages. These results indicate PAE alters neural oscillations during rest in a sex-specific manner, with females with PAE/FASD showing the largest perturbations. These results further demonstrate PAE has global effects on resting-state spectral power and connectivity, creating long-term consequences by potentially disrupting the excitation/inhibition balance in the brain, interrupting normative neurodevelopment.
Collapse
Affiliation(s)
| | - Megan E Schendel
- The Mind Research Network and Lovelace Biomedical Research Institute, Albuquerque, NM, USA
| | - Lucinda L Romero
- The Mind Research Network and Lovelace Biomedical Research Institute, Albuquerque, NM, USA
| | - Cassandra Cerros
- Department of Pediatrics, University of New Mexico Health Sciences Center, Albuquerque, NM, USA
| | - Dina E Hill
- Department of Psychiatry and Behavioral Sciences, University of New Mexico Health Sciences Center, Albuquerque, NM, USA
| | - Julia M Stephen
- The Mind Research Network and Lovelace Biomedical Research Institute, Albuquerque, NM, USA
| |
Collapse
|
175
|
Myrov V, Siebenhühner F, Juvonen JJ, Arnulfo G, Palva S, Palva JM. Rhythmicity of neuronal oscillations delineates their cortical and spectral architecture. Commun Biol 2024; 7:405. [PMID: 38570628 PMCID: PMC10991572 DOI: 10.1038/s42003-024-06083-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/05/2023] [Accepted: 03/20/2024] [Indexed: 04/05/2024] Open
Abstract
Neuronal oscillations are commonly analyzed with power spectral methods that quantify signal amplitude, but not rhythmicity or 'oscillatoriness' per se. Here we introduce a new approach, the phase-autocorrelation function (pACF), for the direct quantification of rhythmicity. We applied pACF to human intracerebral stereoelectroencephalography (SEEG) and magnetoencephalography (MEG) data and uncovered a spectrally and anatomically fine-grained cortical architecture in the rhythmicity of single- and multi-frequency neuronal oscillations. Evidencing the functional significance of rhythmicity, we found it to be a prerequisite for long-range synchronization in resting-state networks and to be dynamically modulated during event-related processing. We also extended the pACF approach to measure 'burstiness' of oscillatory processes and characterized regions with stable and bursty oscillations. These findings show that rhythmicity is double-dissociable from amplitude and constitutes a functionally relevant and dynamic characteristic of neuronal oscillations.
Collapse
Affiliation(s)
- Vladislav Myrov
- Department of Neuroscience and Biomedical Engineering, Aalto University, Espoo, Finland.
| | - Felix Siebenhühner
- Neuroscience Center, Helsinki Institute of Life Science, University of Helsinki, Helsinki, Finland
- BioMag Laboratory, HUS Medical Imaging Center, Helsinki, Finland
| | - Joonas J Juvonen
- Department of Neuroscience and Biomedical Engineering, Aalto University, Espoo, Finland
- Neuroscience Center, Helsinki Institute of Life Science, University of Helsinki, Helsinki, Finland
| | - Gabriele Arnulfo
- Neuroscience Center, Helsinki Institute of Life Science, University of Helsinki, Helsinki, Finland
- Department of Informatics, Bioengineering, Robotics and System Engineering, University of Genoa, Genoa, Italy
| | - Satu Palva
- Neuroscience Center, Helsinki Institute of Life Science, University of Helsinki, Helsinki, Finland
- Centre for Cognitive Neuroimaging, School of Psychology and Neuroscience, University of Glasgow, Glasgow, UK
| | - J Matias Palva
- Department of Neuroscience and Biomedical Engineering, Aalto University, Espoo, Finland
- Neuroscience Center, Helsinki Institute of Life Science, University of Helsinki, Helsinki, Finland
- Centre for Cognitive Neuroimaging, School of Psychology and Neuroscience, University of Glasgow, Glasgow, UK
| |
Collapse
|
176
|
Wu H, Liang X, Wang R, Ma Y, Gao Y, Ning X. A Multivariate analysis on evoked components of Chinese semantic congruity: an OP-MEG study with EEG. Cereb Cortex 2024; 34:bhae108. [PMID: 38610084 DOI: 10.1093/cercor/bhae108] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/08/2024] [Revised: 02/28/2024] [Accepted: 02/29/2024] [Indexed: 04/14/2024] Open
Abstract
The application of wearable magnetoencephalography using optically-pumped magnetometers has drawn extensive attention in the field of neuroscience. Electroencephalogram system can cover the whole head and reflect the overall activity of a large number of neurons. The efficacy of optically-pumped magnetometer in detecting event-related components can be validated through electroencephalogram results. Multivariate pattern analysis is capable of tracking the evolution of neurocognitive processes over time. In this paper, we adopted a classical Chinese semantic congruity paradigm and separately collected electroencephalogram and optically-pumped magnetometer signals. Then, we verified the consistency of optically-pumped magnetometer and electroencephalogram in detecting N400 using mutual information index. Multivariate pattern analysis revealed the difference in decoding performance of these two modalities, which can be further validated by dynamic/stable coding analysis on the temporal generalization matrix. The results from searchlight analysis provided a neural basis for this dissimilarity at the magnetoencephalography source level and the electroencephalogram sensor level. This study opens a new avenue for investigating the brain's coding patterns using wearable magnetoencephalography and reveals the differences in sensitivity between the two modalities in reflecting neuron representation patterns.
Collapse
Affiliation(s)
- Huanqi Wu
- Key Laboratory of Ultra-Weak Magnetic Field Measurement Technology, Ministry of Education, School of Instrumentation and Optoelectronic Engineering, Beihang University, Beijing 100191, China
- Hangzhou Institute of National Extremely-weak Magnetic Field Infrastructure, Hangzhou 310051, China
- Zhejiang Provincial Key Laboratory of Ultra-Weak Magnetic-Field Space and Applied Technology, Hangzhou Innovation Institute, Beihang University, Beijing 100191, China
| | - Xiaoyu Liang
- Key Laboratory of Ultra-Weak Magnetic Field Measurement Technology, Ministry of Education, School of Instrumentation and Optoelectronic Engineering, Beihang University, Beijing 100191, China
- Hangzhou Institute of National Extremely-weak Magnetic Field Infrastructure, Hangzhou 310051, China
- Zhejiang Provincial Key Laboratory of Ultra-Weak Magnetic-Field Space and Applied Technology, Hangzhou Innovation Institute, Beihang University, Beijing 100191, China
| | - Ruonan Wang
- Key Laboratory of Ultra-Weak Magnetic Field Measurement Technology, Ministry of Education, School of Instrumentation and Optoelectronic Engineering, Beihang University, Beijing 100191, China
- Hangzhou Institute of National Extremely-weak Magnetic Field Infrastructure, Hangzhou 310051, China
- Zhejiang Provincial Key Laboratory of Ultra-Weak Magnetic-Field Space and Applied Technology, Hangzhou Innovation Institute, Beihang University, Beijing 100191, China
| | - Yuyu Ma
- Key Laboratory of Ultra-Weak Magnetic Field Measurement Technology, Ministry of Education, School of Instrumentation and Optoelectronic Engineering, Beihang University, Beijing 100191, China
- Hangzhou Institute of National Extremely-weak Magnetic Field Infrastructure, Hangzhou 310051, China
- Zhejiang Provincial Key Laboratory of Ultra-Weak Magnetic-Field Space and Applied Technology, Hangzhou Innovation Institute, Beihang University, Beijing 100191, China
| | - Yang Gao
- Key Laboratory of Ultra-Weak Magnetic Field Measurement Technology, Ministry of Education, School of Instrumentation and Optoelectronic Engineering, Beihang University, Beijing 100191, China
- Hangzhou Institute of National Extremely-weak Magnetic Field Infrastructure, Hangzhou 310051, China
- Zhejiang Provincial Key Laboratory of Ultra-Weak Magnetic-Field Space and Applied Technology, Hangzhou Innovation Institute, Beihang University, Beijing 100191, China
| | - Xiaolin Ning
- Key Laboratory of Ultra-Weak Magnetic Field Measurement Technology, Ministry of Education, School of Instrumentation and Optoelectronic Engineering, Beihang University, Beijing 100191, China
- Hangzhou Institute of National Extremely-weak Magnetic Field Infrastructure, Hangzhou 310051, China
- Zhejiang Provincial Key Laboratory of Ultra-Weak Magnetic-Field Space and Applied Technology, Hangzhou Innovation Institute, Beihang University, Beijing 100191, China
- Shandong Key Laboratory for Magnetic Field-free Medicine & Functional Imaging, Institute of Magnetic Field-free Medicine & Functional Imaging, Shandong University, Shandong 264209, China
- Hefei National Laboratory, Anhui 230026, China
| |
Collapse
|
177
|
Ma YY, Gao Y, Wu HQ, Liang XY, Li Y, Lu H, Liu CZ, Ning XL. OPM-MEG Measuring Phase Synchronization on Source Time Series: Application in Rhythmic Median Nerve Stimulation. IEEE Trans Neural Syst Rehabil Eng 2024; 32:1426-1434. [PMID: 38530717 DOI: 10.1109/tnsre.2024.3381173] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/28/2024]
Abstract
The magnetoencephalogram (MEG) based on array optically pumped magnetometers (OPMs) has the potential of replacing conventional cryogenic superconducting quantum interference device. Phase synchronization is a common method for measuring brain oscillations and functional connectivity. Verifying the feasibility and fidelity of OPM-MEG in measuring phase synchronization will help its widespread application in the study of aforementioned neural mechanisms. The analysis method on source-level time series can weaken the influence of instantaneous field spread effect. In this paper, the OPM-MEG was used for measuring the evoked responses of 20Hz rhythmic and arrhythmic median nerve stimulation, and the inter-trial phase synchronization (ITPS) and inter-reginal phase synchronization (IRPS) of primary somatosensory cortex (SI) and secondary somatosensory cortex (SII) were analysed. The results find that under rhythmic condition, the evoked responses of SI and SII show continuous oscillations and the effect of resetting phase. The values of ITPS and IRPS significantly increase at the stimulation frequency of 20Hz and its harmonic of 40Hz, whereas the arrhythmic stimulation does not exhibit this phenomenon. Moreover, in the initial stage of stimulation, the ITPS and IRPS values are significantly higher at Mu rhythm in the rhythmic condition compared to arrhythmic. In conclusion, the results demonstrate the ability of OPM-MEG in measuring phase pattern and functional connectivity on source-level, and may also prove beneficial for the study on the mechanism of rhythmic stimulation therapy for rehabilitation.
Collapse
|
178
|
Bálint A, Rummel C, Caversaccio M, Weder S. Three-dimensional infrared scanning: an enhanced approach for spatial registration of probes for neuroimaging. NEUROPHOTONICS 2024; 11:024309. [PMID: 38812965 PMCID: PMC11134420 DOI: 10.1117/1.nph.11.2.024309] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/01/2023] [Revised: 05/08/2024] [Accepted: 05/13/2024] [Indexed: 05/31/2024]
Abstract
Significance Accurate spatial registration of probes (e.g., optodes and electrodes) for measurement of brain activity is a crucial aspect in many neuroimaging modalities. It may increase measurement precision and enable the transition from channel-based calculations to volumetric representations. Aim This technical note evaluates the efficacy of a commercially available infrared three-dimensional (3D) scanner under actual experimental (or clinical) conditions and provides guidelines for its use. Method We registered probe positions using an infrared 3D scanner and validated them against magnetic resonance imaging (MRI) scans on five volunteer participants. Results Our analysis showed that with standard cap fixation, the average Euclidean distance of probe position among subjects could reach up to 43 mm, with an average distance of 15.25 mm [standard deviation (SD) = 8.0]. By contrast, the average distance between the infrared 3D scanner and the MRI-acquired positions was 5.69 mm (SD = 1.73), while the average difference between consecutive infrared 3D scans was 3.43 mm (SD = 1.62). The inter-optode distance, which was fixed at 30 mm, was measured as 29.28 mm (SD = 1.12) on the MRI and 29.43 mm (SD = 1.96) on infrared 3D scans. Our results demonstrate the high accuracy and reproducibility of the proposed spatial registration method, making it suitable for both functional near-infrared spectroscopy and electroencephalogram studies. Conclusions The 3D infrared scanning technique for spatial registration of probes provides economic efficiency, simplicity, practicality, repeatability, and high accuracy, with potential benefits for a range of neuroimaging applications. We provide practical guidance on anonymization, labeling, and post-processing of acquired scans.
Collapse
Affiliation(s)
- András Bálint
- University of Bern, ARTORG Center for Biomedical Engineering Research, Hearing Research Laboratory, Bern, Switzerland
- Inselspital, Bern University Hospital, University of Bern, Department of ENT - Head and Neck Surgery, Bern, Switzerland
| | - Christian Rummel
- Inselspital, Bern University Hospital, University of Bern, University Institute of Diagnostic and Interventional Neuroradiology, Support Center for Advanced Neuroimaging (SCAN), Bern, Switzerland
| | - Marco Caversaccio
- University of Bern, ARTORG Center for Biomedical Engineering Research, Hearing Research Laboratory, Bern, Switzerland
- Inselspital, Bern University Hospital, University of Bern, Department of ENT - Head and Neck Surgery, Bern, Switzerland
| | - Stefan Weder
- Inselspital, Bern University Hospital, University of Bern, Department of ENT - Head and Neck Surgery, Bern, Switzerland
| |
Collapse
|
179
|
López-Caballero F, Curtis M, Coffman BA, Salisbury DF. Is source-resolved magnetoencephalographic mismatch negativity a viable biomarker for early psychosis? Eur J Neurosci 2024; 59:1889-1906. [PMID: 37537883 PMCID: PMC10837325 DOI: 10.1111/ejn.16107] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/31/2023] [Revised: 07/04/2023] [Accepted: 07/20/2023] [Indexed: 08/05/2023]
Abstract
Mismatch negativity (MMN) is an auditory event-related response reflecting the pre-attentive detection of novel stimuli and is a biomarker of cortical dysfunction in schizophrenia (SZ). MMN to pitch (pMMN) and to duration (dMMN) deviant stimuli are impaired in chronic SZ, but it is less clear if MMN is reduced in first-episode SZ, with inconsistent findings in scalp-level EEG studies. Here, we investigated the neural generators of pMMN and dMMN with MEG recordings in 26 first-episode schizophrenia spectrum (FEsz) and 26 matched healthy controls (C). We projected MEG inverse solutions into precise functionally meaningful auditory cortex areas. MEG-derived MMN sources were in bilateral primary auditory cortex (A1) and belt areas. In A1, pMMN FEsz reduction showed a trend towards statistical significance (F(1,50) = 3.31; p = .07), and dMMN was reduced in FEsz (F(1,50) = 4.11; p = .04). Hypothesis-driven comparisons at each hemisphere revealed dMMN reduction in FEsz occurred in the left (t(56) = 2.23; p = .03; d = .61) but not right (t(56) = 1.02; p = .31; d = .28) hemisphere, with a moderate effect size. The added precision of MEG source solution with high-resolution MRI and parcellation of A1 may be requisite to detect the emerging pathophysiology and indicates a critical role for left hemisphere pathology at psychosis onset. However, the moderate effect size in left A1, albeit larger than reported in scalp MMN meta-analyses, casts doubt on the clinical utility of MMN for differential diagnosis, as a majority of patients will overlap with the healthy individual's distribution.
Collapse
Affiliation(s)
- Fran López-Caballero
- Clinical Neurophysiology Research Laboratory, Western Psychiatric Hospital, University of Pittsburgh School of Medicine, Pittsburgh, Pennsylvania, USA
| | - Mark Curtis
- Clinical Neurophysiology Research Laboratory, Western Psychiatric Hospital, University of Pittsburgh School of Medicine, Pittsburgh, Pennsylvania, USA
| | - Brian A Coffman
- Clinical Neurophysiology Research Laboratory, Western Psychiatric Hospital, University of Pittsburgh School of Medicine, Pittsburgh, Pennsylvania, USA
| | - Dean F Salisbury
- Clinical Neurophysiology Research Laboratory, Western Psychiatric Hospital, University of Pittsburgh School of Medicine, Pittsburgh, Pennsylvania, USA
| |
Collapse
|
180
|
Power L, Friedman A, Bardouille T. Atypical paroxysmal slow cortical activity in healthy adults: Relationship to age and cognitive performance. Neurobiol Aging 2024; 136:44-57. [PMID: 38309051 DOI: 10.1016/j.neurobiolaging.2024.01.009] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/21/2023] [Revised: 01/17/2024] [Accepted: 01/19/2024] [Indexed: 02/05/2024]
Abstract
Paroxysmal patterns of slow cortical activity have been detected in EEG recordings from individuals with age-related neuropathology and have been shown to be correlated with cognitive dysfunction and blood-brain barrier disruption in these participants. The prevalence of these events in healthy participants, however, has not been studied. In this work, we inspect MEG recordings from 623 healthy participants from the Cam-CAN dataset for the presence of paroxysmal slow wave events (PSWEs). PSWEs were detected in approximately 20% of healthy participants in the dataset, and participants with PSWEs tended to be older and have lower cognitive performance than those without PSWEs. In addition, event features changed linearly with age and cognitive performance, resulting in longer and slower events in older adults, and more widespread events in those with low cognitive performance. These findings provide the first evidence of PSWEs in a subset of purportedly healthy adults. Going forward, these events may have utility as a diagnostic biomarker for atypical brain activity in older adults.
Collapse
Affiliation(s)
- Lindsey Power
- School of Biomedical Engineering, Dalhousie University, Halifax, Nova Scotia, Canada
| | - Alon Friedman
- Department of Medical Neuroscience, Dalhousie University, Halifax, Nova Scotia, Canada
| | - Timothy Bardouille
- Department of Physics & Atmospheric Science, Dalhousie University, Halifax, Nova Scotia, Canada.
| |
Collapse
|
181
|
Yook S, Choi SJ, Zang C, Joo EY, Kim H. Are there effects of light exposure on daytime sleep for rotating shift nurses after night shift?: an EEG power analysis. Front Neurosci 2024; 18:1306070. [PMID: 38601092 PMCID: PMC11004303 DOI: 10.3389/fnins.2024.1306070] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/03/2023] [Accepted: 03/11/2024] [Indexed: 04/12/2024] Open
Abstract
Introduction Night-shift workers often face various health issues stemming from circadian rhythm shift and the consequent poor sleep quality. We aimed to study nurses working night shifts, evaluate the electroencephalogram (EEG) pattern of daytime sleep, and explore possible pattern changes due to ambient light exposure (30 lux) compared to dim conditions (<5 lux) during daytime sleep. Moethods The study involved 31 participants who worked night shifts and 24 healthy adults who had never worked night shifts. The sleep macro and microstructures were analyzed, and electrophysiological activity was compared (1) between nighttime sleep and daytime sleep with dim light and (2) between daytime sleep with dim and 30 lux light conditions. Results The daytime sleep group showed lower slow or delta wave power during non-rapid eye movement (NREM) sleep than the nighttime sleep group. During daytime sleep, lower sigma wave power in N2 sleep was observed under light exposure compared to no light exposure. Moreover, during daytime sleep, lower slow wave power in N3 sleep in the last cycle was observed under light exposure compared to no light exposure. Discussion Our study demonstrated that night shift work and subsequent circadian misalignment strongly affect sleep quality and decrease slow and delta wave activities in NREM sleep. We also observed that light exposure during daytime sleep could additionally decrease N2 sleep spindle activity and N3 waves in the last sleep cycle.
Collapse
Affiliation(s)
- Soonhyun Yook
- USC Stevens Neuroimaging and Informatics Institute, Keck School of Medicine of USC, University of Southern California, Los Angeles, CA, United States
| | - Su Jung Choi
- Graduate School of Clinical Nursing Science, Sungkyunkwan University, Seoul, Republic of Korea
| | - Cong Zang
- USC Stevens Neuroimaging and Informatics Institute, Keck School of Medicine of USC, University of Southern California, Los Angeles, CA, United States
| | - Eun Yeon Joo
- Department of Neurology, Neuroscience Center, Samsung Medical Center, Samsung Biomedical Research Institute, School of Medicine, Sungkyunkwan University, Seoul, Republic of Korea
| | - Hosung Kim
- USC Stevens Neuroimaging and Informatics Institute, Keck School of Medicine of USC, University of Southern California, Los Angeles, CA, United States
| |
Collapse
|
182
|
Brunner C, Schadenbauer P, Schröder N, Grabner RH, Vogel SE. Electrophysiological correlates of symbolic numerical order processing. PLoS One 2024; 19:e0301228. [PMID: 38512938 PMCID: PMC10956805 DOI: 10.1371/journal.pone.0301228] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/17/2023] [Accepted: 03/12/2024] [Indexed: 03/23/2024] Open
Abstract
Determining if a sequence of numbers is ordered or not is one of the fundamental aspects of numerical processing linked to concurrent and future arithmetic skills. While some studies have explored the neural underpinnings of order processing using functional magnetic resonance imaging, our understanding of electrophysiological correlates is comparatively limited. To address this gap, we used a three-item symbolic numerical order verification task (with Arabic numerals from 1 to 9) to study event-related potentials (ERPs) in 73 adult participants in an exploratory approach. We presented three-item sequences and manipulated their order (ordered vs. unordered) as well as their inter-item numerical distance (one vs. two). Participants had to determine if a presented sequence was ordered or not. They also completed a speeded arithmetic fluency test, which measured their arithmetic skills. Our results revealed a significant mean amplitude difference in the grand average ERP waveform between ordered and unordered sequences in a time window of 500-750 ms at left anterior-frontal, left parietal, and central electrodes. We also identified distance-related amplitude differences for both ordered and unordered sequences. While unordered sequences showed an effect in the time window of 500-750 ms at electrode clusters around anterior-frontal and right-frontal regions, ordered sequences differed in an earlier time window (190-275 ms) in frontal and right parieto-occipital regions. Only the mean amplitude difference between ordered and unordered sequences showed an association with arithmetic fluency at the left anterior-frontal electrode. While the earlier time window for ordered sequences is consistent with a more automated and efficient processing of ordered sequential items, distance-related differences in unordered sequences occur later in time.
Collapse
Affiliation(s)
- Clemens Brunner
- Department of Psychology, Educational Neuroscience, University of Graz, Graz, Austria
| | - Philip Schadenbauer
- Department of Psychology, Educational Neuroscience, University of Graz, Graz, Austria
| | - Nele Schröder
- Department of Psychology, Educational Neuroscience, University of Graz, Graz, Austria
| | - Roland H. Grabner
- Department of Psychology, Educational Neuroscience, University of Graz, Graz, Austria
| | - Stephan E. Vogel
- Department of Psychology, Educational Neuroscience, University of Graz, Graz, Austria
| |
Collapse
|
183
|
Tan L, Tang H, Luo H, Chen X, Zheng Z, Ruan J, Zhang D. Exploring brain network oscillations during seizures in drug-naïve patients with juvenile absence epilepsy. Front Neurol 2024; 15:1340959. [PMID: 38550342 PMCID: PMC10972980 DOI: 10.3389/fneur.2024.1340959] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/19/2023] [Accepted: 02/22/2024] [Indexed: 03/17/2025] Open
Abstract
OBJECTIVE We aimed to investigate the brain network activity during seizures in patients with untreated juvenile absence epilepsy. METHODS Thirty-six juvenile absence epilepsy (JAE) patients with a current high frequency of seizures (more than five seizures during a 2 h EEG examination) were included. Each participant underwent a 2 h video EEG examination. Five 10 s EEG epochs for inter-ictal, pre-ictal, and post-ictal, and five 5 s EEG epochs for ictal states were extracted. Five 10 s resting-state EEG epochs for each participant from a sex- and age-matched healthy control (HC) were enrolled. The topological parameters of the brain networks were calculated using a graph theory analysis. RESULTS Compared with the resting state of the HC group, the global efficiency, local efficiency, and clustering coefficients of the JAE group decreased in the inter-ictal state. In addition, the ictal state showed significantly increased global and local efficiency and clustering coefficients (p < 0.05) and a decreased small-world index and the shortest path length (p < 0.05) in the theta and alpha bands, compared to the remaining states within the JAE group. Moreover, subgroup analysis revealed that those JAE patients with typical 3 Hz discharges had upgraded global efficiency, local efficiency, and clustering coefficients in both delta and beta1 bands, compared to those JAE patients with non-3 Hz discharges during seizures. CONCLUSION The present study supported the idea that the changes in the EEG brain networks in JAE patients are characterized by decreased global and local efficiency and clustering coefficient in the alpha band. Moreover, the onset of seizures is accompanied by excessively enhanced network efficiency. JAE patients with different ictal discharge patterns may have different functional network oscillations.
Collapse
Affiliation(s)
- Linjie Tan
- Department of Neurology, The Affiliated Hospital of Southwest Medical University, Luzhou, China
- Laboratory of Neurological Diseases and Brain Function, The Affiliated Hospital of Southwest Medical University, Luzhou, China
| | - Haoling Tang
- Department of Neurology, The Affiliated Hospital of Southwest Medical University, Luzhou, China
- Laboratory of Neurological Diseases and Brain Function, The Affiliated Hospital of Southwest Medical University, Luzhou, China
| | - Hua Luo
- Department of Neurology, The Affiliated Hospital of Southwest Medical University, Luzhou, China
- Laboratory of Neurological Diseases and Brain Function, The Affiliated Hospital of Southwest Medical University, Luzhou, China
| | - Xiu Chen
- Department of Neurology, The Affiliated Hospital of Southwest Medical University, Luzhou, China
- Laboratory of Neurological Diseases and Brain Function, The Affiliated Hospital of Southwest Medical University, Luzhou, China
| | - Zhong Zheng
- Neurobiological Laboratory, West China Hospital, Sichuan University, Chengdu, China
- Center for Neurological Function Test and Neuromodulation, West China Xiamen Hospital, Sichuan University, Xiamen, China
| | - Jianghai Ruan
- Department of Neurology, The Affiliated Hospital of Southwest Medical University, Luzhou, China
- Laboratory of Neurological Diseases and Brain Function, The Affiliated Hospital of Southwest Medical University, Luzhou, China
| | - Dechou Zhang
- Department of Neurology, The Affiliated Traditional Chinese Medicine Hospital of Southwest Medical University, Luzhou, China
| |
Collapse
|
184
|
Yang S, Jiao M, Xiang J, Fotedar N, Sun H, Liu F. Rejuvenating classical brain electrophysiology source localization methods with spatial graph Fourier filters for source extents estimation. Brain Inform 2024; 11:8. [PMID: 38472438 PMCID: PMC10933195 DOI: 10.1186/s40708-024-00221-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/20/2023] [Accepted: 02/25/2024] [Indexed: 03/14/2024] Open
Abstract
EEG/MEG source imaging (ESI) aims to find the underlying brain sources to explain the observed EEG or MEG measurement. Multiple classical approaches have been proposed to solve the ESI problem based on different neurophysiological assumptions. To support clinical decision-making, it is important to estimate not only the exact location of the source signal but also the extended source activation regions. Existing methods may render over-diffuse or sparse solutions, which limit the source extent estimation accuracy. In this work, we leverage the graph structures defined in the 3D mesh of the brain and the spatial graph Fourier transform (GFT) to decompose the spatial graph structure into sub-spaces of low-, medium-, and high-frequency basis. We propose to use the low-frequency basis of spatial graph filters to approximate the extended areas of brain activation and embed the GFT into the classical ESI methods. We validated the classical source localization methods with the corresponding improved version using GFT in both synthetic data and real data. We found the proposed method can effectively reconstruct focal source patterns and significantly improve the performance compared to the classical algorithms.
Collapse
Affiliation(s)
- Shihao Yang
- School of Systems and Enterprises, Stevens Institute of Technology, Hoboken, NJ, 07030, USA
| | - Meng Jiao
- School of Systems and Enterprises, Stevens Institute of Technology, Hoboken, NJ, 07030, USA
| | - Jing Xiang
- MEG Center, Division of Neurology, Cincinnati Children's Hospital Medical Center, Cincinnati, OH, 45229, USA
| | - Neel Fotedar
- Epilepsy Center, Neurological Institute, University Hospitals Cleveland Medical Center, Cleveland, OH, 44106, USA
- Department of Neurology, Case Western Reserve University School of Medicine, Cleveland, OH, 44106, USA
| | - Hai Sun
- Department of Neurosurgery, Rutgers Robert Wood Johnson Medical School of Rutgers University, Brunswick, NJ, 08901, USA
| | - Feng Liu
- School of Systems and Enterprises, Stevens Institute of Technology, Hoboken, NJ, 07030, USA.
- Semcer Center for Healthcare Innovation, Stevens Institute of Technology, Hoboken, NJ, 07030, USA.
| |
Collapse
|
185
|
Sabio J, Williams NS, McArthur GM, Badcock NA. A scoping review on the use of consumer-grade EEG devices for research. PLoS One 2024; 19:e0291186. [PMID: 38446762 PMCID: PMC10917334 DOI: 10.1371/journal.pone.0291186] [Citation(s) in RCA: 8] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/28/2022] [Accepted: 08/23/2023] [Indexed: 03/08/2024] Open
Abstract
BACKGROUND Commercial electroencephalography (EEG) devices have become increasingly available over the last decade. These devices have been used in a wide variety of fields ranging from engineering to cognitive neuroscience. PURPOSE The aim of this study was to chart peer-review articles that used consumer-grade EEG devices to collect neural data. We provide an overview of the research conducted with these relatively more affordable and user-friendly devices. We also inform future research by exploring the current and potential scope of consumer-grade EEG. METHODS We followed a five-stage methodological framework for a scoping review that included a systematic search using the Preferred Reporting Items for Systematic Reviews and Meta-Analyses Extension for Scoping Reviews (PRISMA-ScR) guidelines. We searched the following online databases: PsycINFO, MEDLINE, Embase, Web of Science, and IEEE Xplore. We charted study data according to application (BCI, experimental research, validation, signal processing, and clinical) and location of use as indexed by the first author's country. RESULTS We identified 916 studies that used data recorded with consumer-grade EEG: 531 were reported in journal articles and 385 in conference papers. Emotiv devices were used most, followed by the NeuroSky MindWave, OpenBCI, interaXon Muse, and MyndPlay Mindband. The most common usage was for brain-computer interfaces, followed by experimental research, signal processing, validation, and clinical purposes. CONCLUSIONS Consumer-grade EEG is a useful tool for neuroscientific research and will likely continue to be used well into the future. Our study provides a comprehensive review of their application, as well as future directions for researchers who plan to use these devices.
Collapse
Affiliation(s)
- Joshua Sabio
- School of Psychology, University of Queensland, St Lucia, Queensland, Australia
- School of Psychological Science, University of Western Australia, Perth, Western Australia, Australia
| | - Nikolas S. Williams
- School of Psychological Science, Macquarie University, Sydney, New South Wales, Australia
- Emotiv Inc., San Francisco, California, United States of America
| | - Genevieve M. McArthur
- School of Psychological Science, Macquarie University, Sydney, New South Wales, Australia
| | - Nicholas A. Badcock
- School of Psychological Science, University of Western Australia, Perth, Western Australia, Australia
- School of Psychological Science, Macquarie University, Sydney, New South Wales, Australia
| |
Collapse
|
186
|
Takeuchi N. A dual-brain therapeutic approach using noninvasive brain stimulation based on two-person neuroscience: A perspective review. MATHEMATICAL BIOSCIENCES AND ENGINEERING : MBE 2024; 21:5118-5137. [PMID: 38872529 DOI: 10.3934/mbe.2024226] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/15/2024]
Abstract
Our actions and decisions in everyday life are heavily influenced by social interactions, which are dynamic feedback loops involving actions, reactions, and internal cognitive processes between individual agents. Social interactions induce interpersonal synchrony, which occurs at different biobehavioral levels and comprises behavioral, physiological, and neurological activities. Hyperscanning-a neuroimaging technique that simultaneously measures the activity of multiple brain regions-has provided a powerful second-person neuroscience tool for investigating the phase alignment of neural processes during interactive social behavior. Neural synchronization, revealed by hyperscanning, is a phenomenon called inter-brain synchrony- a process that purportedly facilitates social interactions by prompting appropriate anticipation of and responses to each other's social behaviors during ongoing shared interactions. In this review, I explored the therapeutic dual-brain approach using noninvasive brain stimulation to target inter-brain synchrony based on second-person neuroscience to modulate social interaction. Artificially inducing synchrony between the brains is a potential adjunct technique to physiotherapy, psychotherapy, and pain treatment- which are strongly influenced by the social interaction between the therapist and patient. Dual-brain approaches to personalize stimulation parameters must consider temporal, spatial, and oscillatory factors. Multiple data fusion analysis, the assessment of inter-brain plasticity, a closed-loop system, and a brain-to-brain interface can support personalized stimulation.
Collapse
Affiliation(s)
- Naoyuki Takeuchi
- Department of Physical Therapy, Akita University Graduate School of Health Sciences, 1-1-1 Hondo, Akita, 010-8543, Japan
| |
Collapse
|
187
|
Fernández-Martín R, Feys O, Juvené E, Aeby A, Urbain C, De Tiège X, Wens V. Towards the automated detection of interictal epileptiform discharges with magnetoencephalography. J Neurosci Methods 2024; 403:110052. [PMID: 38151188 DOI: 10.1016/j.jneumeth.2023.110052] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/14/2023] [Revised: 12/08/2023] [Accepted: 12/21/2023] [Indexed: 12/29/2023]
Abstract
BACKGROUND The analysis of clinical magnetoencephalography (MEG) in patients with epilepsy traditionally relies on visual identification of interictal epileptiform discharges (IEDs), which is time consuming and dependent on subjective criteria. NEW METHOD Here, we explore the ability of Independent Components Analysis (ICA) and Hidden Markov Modeling (HMM) to automatically detect and localize IEDs. We tested our pipelines on resting-state MEG recordings from 10 school-aged children with (multi)focal epilepsy. RESULTS In focal epilepsy patients, both pipelines successfully detected visually identified IEDs, but also revealed unidentified low-amplitude IEDs. Success was more mitigated in patients with multifocal epilepsy, as our automated pipeline missed IED activity associated with some foci-an issue that could be alleviated by post-hoc manual selection of epileptiform ICs or HMM states. COMPARISON WITH EXISTING METHODS We compared our results with visual IED detection by an experienced clinical magnetoencephalographer, getting heightened sensitivity and requiring minimal input from clinical practitioners. CONCLUSIONS IED detection based on ICA or HMM represents an efficient way to identify IED localization and timing. The development of these automatic IED detection algorithms provide a step forward in clinical MEG practice by decreasing the duration of MEG analysis and enhancing its sensitivity.
Collapse
Affiliation(s)
- Raquel Fernández-Martín
- Université libre de Bruxelles (ULB), ULB Neuroscience Institute (UNI), Laboratoire de Neuroanatomie et de Neuroimagerie translationnelles (LNbT), Brussels, Belgium.
| | - Odile Feys
- Université libre de Bruxelles (ULB), ULB Neuroscience Institute (UNI), Laboratoire de Neuroanatomie et de Neuroimagerie translationnelles (LNbT), Brussels, Belgium; Université libre de Bruxelles (ULB), Hôpital Universitaire de Bruxelles (H.U.B.), Hôpital Erasme, Department of Neurology, Brussels, Belgium
| | - Elodie Juvené
- Université libre de Bruxelles (ULB), Hôpital Universitaire de Bruxelles (H.U.B.), Department of Pediatric Neurology, Brussels, Belgium
| | - Alec Aeby
- Université libre de Bruxelles (ULB), Hôpital Universitaire de Bruxelles (H.U.B.), Department of Pediatric Neurology, Brussels, Belgium
| | - Charline Urbain
- Université libre de Bruxelles (ULB), ULB Neuroscience Institute (UNI), Laboratoire de Neuroanatomie et de Neuroimagerie translationnelles (LNbT), Brussels, Belgium; Université libre de Bruxelles (ULB), ULB Neuroscience Institute (UNI), Centre for Research in Cognition and Neurosciences (CRCN), Neuropsychology and Functional Neuroimaging Research Unit (UR2NF), Brussels, Belgium
| | - Xavier De Tiège
- Université libre de Bruxelles (ULB), ULB Neuroscience Institute (UNI), Laboratoire de Neuroanatomie et de Neuroimagerie translationnelles (LNbT), Brussels, Belgium; Université libre de Bruxelles (ULB), Hôpital Universitaire de Bruxelles (H.U.B.), Hôpital Erasme, Service of translational Neuroimaging, Brussels, Belgium
| | - Vincent Wens
- Université libre de Bruxelles (ULB), ULB Neuroscience Institute (UNI), Laboratoire de Neuroanatomie et de Neuroimagerie translationnelles (LNbT), Brussels, Belgium; Université libre de Bruxelles (ULB), Hôpital Universitaire de Bruxelles (H.U.B.), Hôpital Erasme, Service of translational Neuroimaging, Brussels, Belgium
| |
Collapse
|
188
|
Schüller A, Schilling A, Krauss P, Reichenbach T. The Early Subcortical Response at the Fundamental Frequency of Speech Is Temporally Separated from Later Cortical Contributions. J Cogn Neurosci 2024; 36:475-491. [PMID: 38165737 DOI: 10.1162/jocn_a_02103] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/04/2024]
Abstract
Most parts of speech are voiced, exhibiting a degree of periodicity with a fundamental frequency and many higher harmonics. Some neural populations respond to this temporal fine structure, in particular at the fundamental frequency. This frequency-following response to speech consists of both subcortical and cortical contributions and can be measured through EEG as well as through magnetoencephalography (MEG), although both differ in the aspects of neural activity that they capture: EEG is sensitive to both radial and tangential sources as well as to deep sources, whereas MEG is more restrained to the measurement of tangential and superficial neural activity. EEG responses to continuous speech have shown an early subcortical contribution, at a latency of around 9 msec, in agreement with MEG measurements in response to short speech tokens, whereas MEG responses to continuous speech have not yet revealed such an early component. Here, we analyze MEG responses to long segments of continuous speech. We find an early subcortical response at latencies of 4-11 msec, followed by later right-lateralized cortical activities at delays of 20-58 msec as well as potential subcortical activities. Our results show that the early subcortical component of the FFR to continuous speech can be measured from MEG in populations of participants and that its latency agrees with that measured with EEG. They furthermore show that the early subcortical component is temporally well separated from later cortical contributions, enabling an independent assessment of both components toward further aspects of speech processing.
Collapse
Affiliation(s)
| | | | - Patrick Krauss
- Friedrich-Alexander-Universität Erlangen-Nürnberg
- Universitätsklinikum Erlangen
| | | |
Collapse
|
189
|
Li J, Kong X, Sun L, Chen X, Ouyang G, Li X, Chen S. Identification of autism spectrum disorder based on electroencephalography: A systematic review. Comput Biol Med 2024; 170:108075. [PMID: 38301514 DOI: 10.1016/j.compbiomed.2024.108075] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/30/2023] [Revised: 12/22/2023] [Accepted: 01/27/2024] [Indexed: 02/03/2024]
Abstract
Autism Spectrum Disorder (ASD) is a neurodevelopmental disorder characterized by difficulties in social communication and repetitive and stereotyped behaviors. According to the World Health Organization, about 1 in 100 children worldwide has autism. With the global prevalence of ASD, timely and accurate diagnosis has been essential in enhancing the intervention effectiveness for ASD children. Traditional ASD diagnostic methods rely on clinical observations and behavioral assessment, with the disadvantages of time-consuming and lack of objective biological indicators. Therefore, automated diagnostic methods based on machine learning and deep learning technologies have emerged and become significant since they can achieve more objective, efficient, and accurate ASD diagnosis. Electroencephalography (EEG) is an electrophysiological monitoring method that records changes in brain spontaneous potential activity, which is of great significance for identifying ASD children. By analyzing EEG data, it is possible to detect abnormal synchronous neuronal activity of ASD children. This paper gives a comprehensive review of the EEG-based ASD identification using traditional machine learning methods and deep learning approaches, including their merits and potential pitfalls. Additionally, it highlights the challenges and the opportunities ahead in search of more effective and efficient methods to automatically diagnose autism based on EEG signals, which aims to facilitate automated ASD identification.
Collapse
Affiliation(s)
- Jing Li
- School of Computer Science and Engineering, Tianjin University of Technology, Tianjin, 300384, China
| | - Xiaoli Kong
- School of Computer Science and Engineering, Tianjin University of Technology, Tianjin, 300384, China
| | - Linlin Sun
- Neuroscience Research Institute, Peking University, Beijing, 100191, China; Key Laboratory for Neuroscience, Ministry of Education/National Health Commission of China, Beijing, 100191, China
| | - Xu Chen
- The National Clinical Research Center for Mental Disorders & Beijing Key Laboratory of Mental Disorders, Beijing Anding Hospital, Beijing, 100120, China; The Advanced Innovation Center for Human Brain Protection, Capital Medical University, Beijing, 100032, China
| | - Gaoxiang Ouyang
- State Key Laboratory of Cognitive Neuroscience and Learning, Beijing Normal University, Beijing, 100875, China.
| | - Xiaoli Li
- State Key Laboratory of Cognitive Neuroscience and Learning, Beijing Normal University, Beijing, 100875, China
| | - Shengyong Chen
- School of Computer Science and Engineering, Tianjin University of Technology, Tianjin, 300384, China
| |
Collapse
|
190
|
Zou R, Zhao L, He S, Zhou X, Yin X. Effect of the period of EEG signals on the decoding of motor information. Phys Eng Sci Med 2024; 47:249-260. [PMID: 38150057 DOI: 10.1007/s13246-023-01361-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/13/2023] [Accepted: 11/22/2023] [Indexed: 12/28/2023]
Abstract
Decoding movement information from electroencephalogram to construct brain-computer interface has promising applications. The EEG data during the entire motor imagery (MI) period or movement execution (ME) period is generally decoded, and calculation of numerous information and massive dataset is time-consuming. In order to improve decoding efficiency, the joint topographic maps of the brain activation state of 15 subjects were studied during different periods. The results showed that the activation intensity of the preparation period in the motor imagery experiment was higher than during the exercise period, while during the exercise period, the activation intensity was higher than in the preparation period in the movement execution experiment. Hence, the wavelet neural network was used to decode the six-class movements including elbow flexion/extension, forearm pronation/supination and hand open/close in periods of MI/ME. The experimental results show that the accuracy obtained in the preparation period is the highest in the motor imagery experiment, which is 80.77%. On the other hand, the highest accuracy obtained in the exercise period of the movement execution experiment is 79.26%. It further proves that the optimized period is a key decoding factor to reduce the cost of calculation, and this new decoding method is effective to build a more intelligent brain-computer interface system.
Collapse
Affiliation(s)
- Renling Zou
- Department of Health Science and Engineering, University of Shanghai for Science and Technology, Shanghai, China.
| | - Liang Zhao
- Department of Health Science and Engineering, University of Shanghai for Science and Technology, Shanghai, China
| | - Shuang He
- Department of Health Science and Engineering, University of Shanghai for Science and Technology, Shanghai, China
| | - Xiaobo Zhou
- Department of Health Science and Engineering, University of Shanghai for Science and Technology, Shanghai, China
| | - Xuezhi Yin
- Shanghai Berry Electronic Technology Co., Ltd, Shanghai, China
| |
Collapse
|
191
|
Maruyama Y, Nakamura R, Tsuji S, Xuan Y, Mizutani K, Okaze T, Yoshimura N. Classification of pleasantness of wind by electroencephalography. PLoS One 2024; 19:e0299036. [PMID: 38412198 PMCID: PMC10898722 DOI: 10.1371/journal.pone.0299036] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/19/2023] [Accepted: 02/02/2024] [Indexed: 02/29/2024] Open
Abstract
Thermal comfort of humans depends on the surrounding environment and affects their productivity. Several environmental factors, such as air temperature, relative humidity, wind or airflow, and radiation, have considerable influence on the thermal comfort or pleasantness; hence, these are generally controlled by electrical devices. Lately, the development of objective measurement methods for thermal comfort or pleasantness using physiological signals is receiving attention to realize a personalized comfortable environment through the automatic control of electrical devices. In this study, we focused on electroencephalography (EEG) and investigated whether EEG signals contain information related to the pleasantness of ambient airflow reproducing natural wind fluctuations using machine learning methods. In a hot and humid artificial climate chamber, we measured EEG signals while the participants were exposed to airflow at four different velocities. Based on the reported pleasantness levels, we performed within-participant classification from the source activity of the EEG and obtained a classification accuracy higher than the chance level using both linear and nonlinear support vector machine classifiers as well as an artificial neural network. The results of this study showed that EEG is useful in identifying people's transient pleasantness when exposed to wind.
Collapse
Affiliation(s)
| | - Ryuto Nakamura
- School of Environment and Society, Tokyo Institute of Technology, Yokohama, Japan
| | - Shota Tsuji
- School of Engineering, Tokyo Institute of Technology, Yokohama, Japan
| | - Yingli Xuan
- Faculty of Engineering, Tokyo Polytechnic University, Atsugi, Japan
| | - Kunio Mizutani
- Faculty of Engineering, Tokyo Polytechnic University, Atsugi, Japan
| | - Tsubasa Okaze
- School of Environment and Society, Tokyo Institute of Technology, Yokohama, Japan
| | - Natsue Yoshimura
- School of Computing, Tokyo Institute of Technology, Yokohama, Japan
- ATR Brain Information Communication Research Laboratory Group, Kyoto, Japan
| |
Collapse
|
192
|
Zhu Y, Li C, Hendry C, Glass J, Canseco-Gonzalez E, Pitts MA, Dykstra AR. Isolating Neural Signatures of Conscious Speech Perception with a No-Report Sine-Wave Speech Paradigm. J Neurosci 2024; 44:e0145232023. [PMID: 38191569 PMCID: PMC10883607 DOI: 10.1523/jneurosci.0145-23.2023] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/24/2023] [Revised: 11/21/2023] [Accepted: 12/21/2023] [Indexed: 01/10/2024] Open
Abstract
Identifying neural correlates of conscious perception is a fundamental endeavor of cognitive neuroscience. Most studies so far have focused on visual awareness along with trial-by-trial reports of task-relevant stimuli, which can confound neural measures of perceptual awareness with postperceptual processing. Here, we used a three-phase sine-wave speech paradigm that dissociated between conscious speech perception and task relevance while recording EEG in humans of both sexes. Compared with tokens perceived as noise, physically identical sine-wave speech tokens that were perceived as speech elicited a left-lateralized, near-vertex negativity, which we interpret as a phonological version of a perceptual awareness negativity. This response appeared between 200 and 300 ms after token onset and was not present for frequency-flipped control tokens that were never perceived as speech. In contrast, the P3b elicited by task-irrelevant tokens did not significantly differ when the tokens were perceived as speech versus noise and was only enhanced for tokens that were both perceived as speech and relevant to the task. Our results extend the findings from previous studies on visual awareness and speech perception and suggest that correlates of conscious perception, across types of conscious content, are most likely to be found in midlatency negative-going brain responses in content-specific sensory areas.
Collapse
Affiliation(s)
- Yunkai Zhu
- Department of Biomedical Engineering, University of Miami, Coral Gables, Florida 33143
| | - Charlotte Li
- Department of Psychology, Reed College, Portland, Oregon 97202
| | - Camille Hendry
- Department of Psychology, Reed College, Portland, Oregon 97202
| | - James Glass
- Department of Psychology, Reed College, Portland, Oregon 97202
| | | | - Michael A Pitts
- Department of Psychology, Reed College, Portland, Oregon 97202
| | - Andrew R Dykstra
- Department of Biomedical Engineering, University of Miami, Coral Gables, Florida 33143
| |
Collapse
|
193
|
Mamashli F, Khan S, Hatamimajoumerd E, Jas M, Uluç I, Lankinen K, Obleser J, Friederici AD, Maess B, Ahveninen J. Characterizing directional dynamics of semantic prediction based on inter-regional temporal generalization. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2024.02.13.580183. [PMID: 38405823 PMCID: PMC10888763 DOI: 10.1101/2024.02.13.580183] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/27/2024]
Abstract
The event-related potential/field component N400(m) has been widely used as a neural index for semantic prediction. It has long been hypothesized that feedback information from inferior frontal areas plays a critical role in generating the N400. However, due to limitations in causal connectivity estimation, direct testing of this hypothesis has remained difficult. Here, magnetoencephalography (MEG) data was obtained during a classic N400 paradigm where the semantic predictability of a fixed target noun was manipulated in simple German sentences. To estimate causality, we implemented a novel approach based on machine learning and temporal generalization to estimate the effect of inferior frontal gyrus (IFG) on temporal areas. In this method, a support vector machine (SVM) classifier is trained on each time point of the neural activity in IFG to classify less predicted (LP) and highly predicted (HP) nouns and then tested on all time points of superior/middle temporal sub-regions activity (and vice versa, to establish spatio-temporal evidence for or against causality). The decoding accuracy was significantly above chance level when the classifier was trained on IFG activity and tested on future activity in superior and middle temporal gyrus (STG/MTG). The results present new evidence for a model predictive speech comprehension where predictive IFG activity is fed back to shape subsequent activity in STG/MTG, implying a feedback mechanism in N400 generation. In combination with the also observed strong feedforward effect from left STG/MTG to IFG, our findings provide evidence of dynamic feedback and feedforward influences between IFG and temporal areas during N400 generation.
Collapse
Affiliation(s)
- Fahimeh Mamashli
- Department of Radiology, Massachusetts General Hospital, Athinoula A. Martinos Center for Biomedical Imaging, Harvard Medical School, Boston, MA 02129
| | - Sheraz Khan
- Department of Radiology, Massachusetts General Hospital, Athinoula A. Martinos Center for Biomedical Imaging, Harvard Medical School, Boston, MA 02129
| | - Elaheh Hatamimajoumerd
- Department of Electrical and Computer Engineering, Northeastern University, Boston, MA 02115
| | - Mainak Jas
- Department of Radiology, Massachusetts General Hospital, Athinoula A. Martinos Center for Biomedical Imaging, Harvard Medical School, Boston, MA 02129
| | - Işıl Uluç
- Department of Radiology, Massachusetts General Hospital, Athinoula A. Martinos Center for Biomedical Imaging, Harvard Medical School, Boston, MA 02129
| | - Kaisu Lankinen
- Department of Radiology, Massachusetts General Hospital, Athinoula A. Martinos Center for Biomedical Imaging, Harvard Medical School, Boston, MA 02129
| | - Jonas Obleser
- Department of Psychology, University of Lübeck, Lübeck 23562, Germany
| | - Angela D. Friederici
- Department of Neuropsychology, Max Planck Institute for Human Cognitive and Brain Sciences, Leipzig 04103, Germany
| | - Burkhard Maess
- MEG and Cortical Networks Group, Max Planck Institute for Human Cognitive and Brain Sciences, Leipzig 04103, Germany
| | - Jyrki Ahveninen
- Department of Radiology, Massachusetts General Hospital, Athinoula A. Martinos Center for Biomedical Imaging, Harvard Medical School, Boston, MA 02129
| |
Collapse
|
194
|
Lankinen K, Ahveninen J, Jas M, Raij T, Ahlfors SP. Neuronal modeling of magnetoencephalography responses in auditory cortex to auditory and visual stimuli. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2023.06.16.545371. [PMID: 37398025 PMCID: PMC10312796 DOI: 10.1101/2023.06.16.545371] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Indexed: 07/04/2023]
Abstract
Previous studies have demonstrated that auditory cortex activity can be influenced by crosssensory visual inputs. Intracortical recordings in non-human primates (NHP) have suggested a bottom-up feedforward (FF) type laminar profile for auditory evoked but top-down feedback (FB) type for cross-sensory visual evoked activity in the auditory cortex. To test whether this principle applies also to humans, we analyzed magnetoencephalography (MEG) responses from eight human subjects (six females) evoked by simple auditory or visual stimuli. In the estimated MEG source waveforms for auditory cortex region of interest, auditory evoked responses showed peaks at 37 and 90 ms and cross-sensory visual responses at 125 ms. The inputs to the auditory cortex were then modeled through FF and FB type connections targeting different cortical layers using the Human Neocortical Neurosolver (HNN), which consists of a neocortical circuit model linking the cellular- and circuit-level mechanisms to MEG. The HNN models suggested that the measured auditory response could be explained by an FF input followed by an FB input, and the crosssensory visual response by an FB input. Thus, the combined MEG and HNN results support the hypothesis that cross-sensory visual input in the auditory cortex is of FB type. The results also illustrate how the dynamic patterns of the estimated MEG/EEG source activity can provide information about the characteristics of the input into a cortical area in terms of the hierarchical organization among areas.
Collapse
Affiliation(s)
- Kaisu Lankinen
- Athinoula A. Martinos Center for Biomedical Imaging, Massachusetts General Hospital, Charlestown, MA 02129
- Department of Radiology, Harvard Medical School, Boston, MA 02115
| | - Jyrki Ahveninen
- Athinoula A. Martinos Center for Biomedical Imaging, Massachusetts General Hospital, Charlestown, MA 02129
- Department of Radiology, Harvard Medical School, Boston, MA 02115
| | - Mainak Jas
- Athinoula A. Martinos Center for Biomedical Imaging, Massachusetts General Hospital, Charlestown, MA 02129
- Department of Radiology, Harvard Medical School, Boston, MA 02115
| | - Tommi Raij
- Athinoula A. Martinos Center for Biomedical Imaging, Massachusetts General Hospital, Charlestown, MA 02129
- Department of Radiology, Harvard Medical School, Boston, MA 02115
| | - Seppo P. Ahlfors
- Athinoula A. Martinos Center for Biomedical Imaging, Massachusetts General Hospital, Charlestown, MA 02129
- Department of Radiology, Harvard Medical School, Boston, MA 02115
| |
Collapse
|
195
|
Radhakrishnan BL, Ezra K, Jebadurai IJ, Selvakumar I, Karthikeyan P. An Autonomous Sleep-Stage Detection Technique in Disruptive Technology Environment. SENSORS (BASEL, SWITZERLAND) 2024; 24:1197. [PMID: 38400354 PMCID: PMC10892786 DOI: 10.3390/s24041197] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/21/2023] [Revised: 02/07/2024] [Accepted: 02/08/2024] [Indexed: 02/25/2024]
Abstract
Autonomous sleep tracking at home has become inevitable in today's fast-paced world. A crucial aspect of addressing sleep-related issues involves accurately classifying sleep stages. This paper introduces a novel approach PSO-XGBoost, combining particle swarm optimisation (PSO) with extreme gradient boosting (XGBoost) to enhance the XGBoost model's performance. Our model achieves improved overall accuracy and faster convergence by leveraging PSO to fine-tune hyperparameters. Our proposed model utilises features extracted from EEG signals, spanning time, frequency, and time-frequency domains. We employed the Pz-oz signal dataset from the sleep-EDF expanded repository for experimentation. Our model achieves impressive metrics through stratified-K-fold validation on ten selected subjects: 95.4% accuracy, 95.4% F1-score, 95.4% precision, and 94.3% recall. The experiment results demonstrate the effectiveness of our technique, showcasing an average accuracy of 95%, outperforming traditional machine learning classifications. The findings revealed that the feature-shifting approach supplements the classification outcome by 3 to 4 per cent. Moreover, our findings suggest that prefrontal EEG derivations are ideal options and could open up exciting possibilities for using wearable EEG devices in sleep monitoring. The ease of obtaining EEG signals with dry electrodes on the forehead enhances the feasibility of this application. Furthermore, the proposed method demonstrates computational efficiency and holds significant value for real-time sleep classification applications.
Collapse
Affiliation(s)
- Baskaran Lizzie Radhakrishnan
- Department of Computer Science and Engineering, Karunya Institute of Technology and Sciences, Coimbatore 641114, India; (B.L.R.); (I.J.J.)
| | - Kirubakaran Ezra
- Department of Computer Science and Engineering, Grace College of Engineering, Coimbatore 628005, India;
| | - Immanuel Johnraja Jebadurai
- Department of Computer Science and Engineering, Karunya Institute of Technology and Sciences, Coimbatore 641114, India; (B.L.R.); (I.J.J.)
| | - Immanuel Selvakumar
- Department of Electrical and Electronics Engineering, Karunya Institute of Technology and Sciences, Coimbatore 641114, India;
| | | |
Collapse
|
196
|
Askari P, Cardoso da Fonseca N, Pruitt T, Maldjian JA, Alick-Lindstrom S, Davenport EM. Magnetoencephalography (MEG) Data Processing in Epilepsy Patients with Implanted Responsive Neurostimulation (RNS) Devices. Brain Sci 2024; 14:173. [PMID: 38391747 PMCID: PMC10887328 DOI: 10.3390/brainsci14020173] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/03/2024] [Revised: 01/30/2024] [Accepted: 02/06/2024] [Indexed: 02/24/2024] Open
Abstract
Drug-resistant epilepsy (DRE) is often treated with surgery or neuromodulation. Specifically, responsive neurostimulation (RNS) is a widely used therapy that is programmed to detect abnormal brain activity and intervene with tailored stimulation. Despite the success of RNS, some patients require further interventions. However, having an RNS device in situ is a hindrance to the performance of neuroimaging techniques. Magnetoencephalography (MEG), a non-invasive neurophysiologic and functional imaging technique, aids epilepsy assessment and surgery planning. MEG performed post-RNS is complicated by signal distortions. This study proposes an independent component analysis (ICA)-based approach to enhance MEG signal quality, facilitating improved assessment for epilepsy patients with implanted RNS devices. Three epilepsy patients, two with RNS implants and one without, underwent MEG scans. Preprocessing included temporal signal space separation (tSSS) and an automated ICA-based approach with MNE-Python. Power spectral density (PSD) and signal-to-noise ratio (SNR) were analyzed, and MEG dipole analysis was conducted using single equivalent current dipole (SECD) modeling. The ICA-based noise removal preprocessing method substantially improved the signal-to-noise ratio (SNR) for MEG data from epilepsy patients with implanted RNS devices. Qualitative assessment confirmed enhanced signal readability and improved MEG dipole analysis. ICA-based processing markedly enhanced MEG data quality in RNS patients, emphasizing its clinical relevance.
Collapse
Affiliation(s)
- Pegah Askari
- Radiology Department, The University of Texas Southwestern Medical Center, Dallas, TX 75390, USA
- MEG Center of Excellence, The University of Texas Southwestern Medical Center, Dallas, TX 75390, USA
- Biomedical Engineering Department, The University of Texas Southwestern Medical Center, Dallas, TX 75390, USA
- Biomedical Engineering Department, The University of Texas at Arlington, Arlington, TX 76010, USA
| | - Natascha Cardoso da Fonseca
- Radiology Department, The University of Texas Southwestern Medical Center, Dallas, TX 75390, USA
- MEG Center of Excellence, The University of Texas Southwestern Medical Center, Dallas, TX 75390, USA
| | - Tyrell Pruitt
- Radiology Department, The University of Texas Southwestern Medical Center, Dallas, TX 75390, USA
- MEG Center of Excellence, The University of Texas Southwestern Medical Center, Dallas, TX 75390, USA
| | - Joseph A Maldjian
- Radiology Department, The University of Texas Southwestern Medical Center, Dallas, TX 75390, USA
- MEG Center of Excellence, The University of Texas Southwestern Medical Center, Dallas, TX 75390, USA
- Biomedical Engineering Department, The University of Texas Southwestern Medical Center, Dallas, TX 75390, USA
| | - Sasha Alick-Lindstrom
- Radiology Department, The University of Texas Southwestern Medical Center, Dallas, TX 75390, USA
- MEG Center of Excellence, The University of Texas Southwestern Medical Center, Dallas, TX 75390, USA
- Neurology Department, The University of Texas Southwestern Medical Center, Dallas, TX 75390, USA
| | - Elizabeth M Davenport
- Radiology Department, The University of Texas Southwestern Medical Center, Dallas, TX 75390, USA
- MEG Center of Excellence, The University of Texas Southwestern Medical Center, Dallas, TX 75390, USA
- Biomedical Engineering Department, The University of Texas Southwestern Medical Center, Dallas, TX 75390, USA
| |
Collapse
|
197
|
Oberman LM, Francis SM, Beynel L, Hynd M, Jaime M, Robins PL, Deng ZD, Stout J, van der Veen JW, Lisanby SH. Design and methodology for a proof of mechanism study of individualized neuronavigated continuous Theta burst stimulation for auditory processing in adolescents with autism spectrum disorder. Front Psychiatry 2024; 15:1304528. [PMID: 38389984 PMCID: PMC10881663 DOI: 10.3389/fpsyt.2024.1304528] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 09/29/2023] [Accepted: 01/24/2024] [Indexed: 02/24/2024] Open
Abstract
It has been suggested that aberrant excitation/inhibition (E/I) balance and dysfunctional structure and function of relevant brain networks may underlie the symptoms of autism spectrum disorder (ASD). However, the nomological network linking these constructs to quantifiable measures and mechanistically relating these constructs to behavioral symptoms of ASD is lacking. Herein we describe a within-subject, controlled, proof-of-mechanism study investigating the pathophysiology of auditory/language processing in adolescents with ASD. We utilize neurophysiological and neuroimaging techniques including magnetic resonance spectroscopy (MRS), diffusion-weighted imaging (DWI), functional magnetic resonance imaging (fMRI), and magnetoencephalography (MEG) metrics of language network structure and function. Additionally, we apply a single, individually targeted session of continuous theta burst stimulation (cTBS) as an experimental probe of the impact of perturbation of the system on these neurophysiological and neuroimaging outcomes. MRS, fMRI, and MEG measures are evaluated at baseline and immediately prior to and following cTBS over the posterior superior temporal cortex (pSTC), a region involved in auditory and language processing deficits in ASD. Also, behavioral measures of ASD and language processing and DWI measures of auditory/language network structures are obtained at baseline to characterize the relationship between the neuroimaging and neurophysiological measures and baseline symptom presentation. We hypothesize that local gamma-aminobutyric acid (GABA) and glutamate concentrations (measured with MRS), and structural and functional activity and network connectivity (measured with DWI and fMRI), will significantly predict MEG indices of auditory/language processing and behavioral deficits in ASD. Furthermore, a single session of cTBS over left pSTC is hypothesized to lead to significant, acute changes in local glutamate and GABA concentration, functional activity and network connectivity, and MEG indices of auditory/language processing. We have completed the pilot phase of the study (n=20 Healthy Volunteer adults) and have begun enrollment for the main phase with adolescents with ASD (n=86; age 14-17). If successful, this study will establish a nomological network linking local E/I balance measures to functional and structural connectivity within relevant brain networks, ultimately connecting them to ASD symptoms. Furthermore, this study will inform future therapeutic trials using cTBS to treat the symptoms of ASD.
Collapse
Affiliation(s)
- Lindsay M Oberman
- Noninvasive Neuromodulation Unit, Experimental Therapeutics and Pathophysiology Branch, National Institute of Mental Health, National Institutes of Health, Bethesda, MD, United States
| | - Sunday M Francis
- Noninvasive Neuromodulation Unit, Experimental Therapeutics and Pathophysiology Branch, National Institute of Mental Health, National Institutes of Health, Bethesda, MD, United States
| | - Lysianne Beynel
- Noninvasive Neuromodulation Unit, Experimental Therapeutics and Pathophysiology Branch, National Institute of Mental Health, National Institutes of Health, Bethesda, MD, United States
| | - Megan Hynd
- Clinical Affective Neuroscience Laboratory, Department of Psychology & Neuroscience, University of North Carolina, Chapel Hill, NC, United States
| | - Miguel Jaime
- Noninvasive Neuromodulation Unit, Experimental Therapeutics and Pathophysiology Branch, National Institute of Mental Health, National Institutes of Health, Bethesda, MD, United States
| | - Pei L Robins
- Noninvasive Neuromodulation Unit, Experimental Therapeutics and Pathophysiology Branch, National Institute of Mental Health, National Institutes of Health, Bethesda, MD, United States
| | - Zhi-De Deng
- Noninvasive Neuromodulation Unit, Experimental Therapeutics and Pathophysiology Branch, National Institute of Mental Health, National Institutes of Health, Bethesda, MD, United States
| | - Jeff Stout
- Magnetoencephalography Core, National Institute of Mental Health, National Institutes of Health, Bethesda, MD, United States
| | - Jan Willem van der Veen
- Magnetic Resonance Spectroscopy Core, National Institute of Mental Health, National Institutes of Health, Bethesda, MD, United States
| | - Sarah H Lisanby
- Noninvasive Neuromodulation Unit, Experimental Therapeutics and Pathophysiology Branch, National Institute of Mental Health, National Institutes of Health, Bethesda, MD, United States
| |
Collapse
|
198
|
Heinilä E, Hyvärinen A, Parkkonen L, Parviainen T. Penalized canonical correlation analysis reveals a relationship between temperament traits and brain oscillations during mind wandering. Brain Behav 2024; 14:e3428. [PMID: 38361323 PMCID: PMC10869894 DOI: 10.1002/brb3.3428] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 02/01/2023] [Revised: 12/13/2023] [Accepted: 01/29/2024] [Indexed: 02/17/2024] Open
Abstract
INTRODUCTION There has been a growing interest in studying brain activity under naturalistic conditions. However, the relationship between individual differences in ongoing brain activity and psychological characteristics is not well understood. We investigated this connection, focusing on the association between oscillatory activity in the brain and individually characteristic dispositional traits. Given the variability of unconstrained resting states among individuals, we devised a paradigm that could harmonize the state of mind across all participants. METHODS We constructed task contrasts that included focused attention (FA), self-centered future planning, and rumination on anxious thoughts triggered by visual imagery. Magnetoencephalography was recorded from 28 participants under these 3 conditions for a duration of 16 min. The oscillatory power in the alpha and beta bands was converted into spatial contrast maps, representing the difference in brain oscillation power between the two conditions. We performed permutation cluster tests on these spatial contrast maps. Additionally, we applied penalized canonical correlation analysis (CCA) to study the relationship between brain oscillation patterns and behavioral traits. RESULTS The data revealed that the FA condition, as compared to the other conditions, was associated with higher alpha and beta power in the temporal areas of the left hemisphere and lower alpha and beta power in the parietal areas of the right hemisphere. Interestingly, the penalized CCA indicated that behavioral inhibition was positively correlated, whereas anxiety was negatively correlated, with a pattern of high oscillatory power in the bilateral precuneus and low power in the bilateral temporal regions. This unique association was found in the anxious-thoughts condition when contrasted with the focused-attention condition. CONCLUSION Our findings suggest individual temperament traits significantly affect brain engagement in naturalistic conditions. This research underscores the importance of considering individual traits in neuroscience and offers an effective method for analyzing brain activity and psychological differences.
Collapse
Affiliation(s)
- Erkka Heinilä
- Faculty of Information TechnologyUniversity of JyväskyläJyväskyläFinland
| | - Aapo Hyvärinen
- Department of Computer ScienceUniversity of HelsinkiHelsinkiFinland
- Université Paris‐Saclay, Inria, CEAGif‐sur‐YvetteFrance
| | - Lauri Parkkonen
- Department of Neuroscience and Biomedical EngineeringAalto University School of ScienceEspooFinland
| | - Tiina Parviainen
- Centre of Interdisciplinary Brain Research, Department of Psychology, Faculty of Education and PsychologyUniversity of JyväskyläJyväskyläFinland
| |
Collapse
|
199
|
Xu F, Li Y, Wang Y, Wang S, Sun F, Wang X. Interictal magnetic signals in new-onset Rolandic epilepsy may help with timing of treatment selection. Epilepsia Open 2024; 9:368-379. [PMID: 38145506 PMCID: PMC10839299 DOI: 10.1002/epi4.12884] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/26/2023] [Revised: 11/03/2023] [Accepted: 12/15/2023] [Indexed: 12/27/2023] Open
Abstract
OBJECTIVE With research progress on Rolandic epilepsy (RE), its "benign" nature has been phased out. Clinicians are exhibiting an increasing tendency toward a more assertive treatment approach for RE. Nonetheless, in clinical practice, delayed treatment remains common because of the "self-limiting" nature of RE. Therefore, this study aimed to identify an imaging marker to aid treatment decisions and select a more appropriate time for initiating therapy for RE. METHODS We followed up with children newly diagnosed with RE, classified them into medicated and non-medicated groups according to the follow-up results, and compared them with matched healthy controls. Before beginning follow-up visits, interictal magnetic data were collected using magnetoencephalography in treatment-naïve recently diagnosed patients. The spectral power of the whole brain during initial diagnosis was determined using minimum normative estimation combined with the Welch technique. RESULTS A difference was observed in the magnetic source intensity within the left caudal anterior cingulate and precentral and postcentral gyri in the delta band between the medicated and non-medicated groups. The results revealed good discriminatory ability within the receiver operator characteristic curve. In the medicated group, there was a specific change in the frontotemporal magnetic source intensity, which shifted from high to low frequencies, compared with the healthy control group. SIGNIFICANCE The intensity of the precentral gyrus magnetic source within the delta band showed good specificity. Considering the rigor of initial treatment, the intensity of the precentral gyrus magnetic source can provide some help as an imaging marker for initial RE treatment, particularly for the timing of treatment initiation.
Collapse
Affiliation(s)
- Fengyuan Xu
- Country Department of NeurologyThe Affiliated Brain Hospital of Nanjing Medical UniversityNanjingChina
| | - Yihan Li
- Country Department of NeurologyThe Affiliated Brain Hospital of Nanjing Medical UniversityNanjingChina
| | - Yingfan Wang
- Country Department of NeurologyThe Affiliated Brain Hospital of Nanjing Medical UniversityNanjingChina
| | - Siyi Wang
- Country Department of NeurologyThe Affiliated Brain Hospital of Nanjing Medical UniversityNanjingChina
| | - Fangling Sun
- Country Department of NeurologyThe Affiliated Brain Hospital of Nanjing Medical UniversityNanjingChina
| | - Xiaoshan Wang
- Country Department of NeurologyThe Affiliated Brain Hospital of Nanjing Medical UniversityNanjingChina
| |
Collapse
|
200
|
Zhang R, Rong R, Gan JQ, Xu Y, Wang H, Wang X. Reliable and fast automatic artifact rejection of Long-Term EEG recordings based on Isolation Forest. Med Biol Eng Comput 2024; 62:521-535. [PMID: 37943419 DOI: 10.1007/s11517-023-02961-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/27/2023] [Accepted: 10/28/2023] [Indexed: 11/10/2023]
Abstract
Long-term electroencephalogram (Long-Term EEG) has the capacity to monitor over a long period, making it a valuable tool in medical institutions. However, due to the large volume of patient data, selecting clean data segments from raw Long-Term EEG for further analysis is an extremely time-consuming and labor-intensive task. Furthermore, the various actions of patients during recording make it difficult to use algorithms to denoise part of the EEG data, and thus lead to the rejection of these data. Therefore, tools for the quick rejection of heavily corrupted epochs in Long-Term EEG records are highly beneficial. In this paper, a new reliable and fast automatic artifact rejection method for Long-Term EEG based on Isolation Forest (IF) is proposed. Specifically, the IF algorithm is repetitively applied to detect outliers in the EEG data, and the boundary of inliers is promptly adjusted by using a statistical indicator to make the algorithm proceed in an iterative manner. The iteration is terminated when the distance metric between clean epochs and artifact-corrupted epochs remains unchanged. Six statistical indicators (i.e., min, max, median, mean, kurtosis, and skewness) are evaluated by setting them as centroid to adjust the boundary during iteration, and the proposed method is compared with several state-of-the-art methods on a retrospectively collected dataset. The experimental results indicate that utilizing the min value of data as the centroid yields the most optimal performance, and the proposed method is highly efficacious and reliable in the automatic artifact rejection of Long-Term EEG, as it significantly improves the overall data quality. Furthermore, the proposed method surpasses compared methods on most data segments with poor data quality, demonstrating its superior capacity to enhance the data quality of the heavily corrupted data. Besides, owing to the linear time complexity of IF, the proposed method is much faster than other methods, thus providing an advantage when dealing with extensive datasets.
Collapse
Affiliation(s)
- Runkai Zhang
- Key Laboratory of Child Development and Learning Science of Ministry of Education, School of Biological Science & Medical Engineering, Southeast University, Nanjing, 210096, Jiangsu, People's Republic of China
| | - Rong Rong
- Department of Neurology, Nanjing Drum Tower Hospital, Nanjing, 210008, Jiangsu, People's Republic of China
| | - John Q Gan
- School of Computer Science and Electronic Engineering, University of Essex, Colchester, CO4 3SQ, UK
| | - Yun Xu
- Department of Neurology, Nanjing Drum Tower Hospital, Nanjing, 210008, Jiangsu, People's Republic of China
| | - Haixian Wang
- Key Laboratory of Child Development and Learning Science of Ministry of Education, School of Biological Science & Medical Engineering, Southeast University, Nanjing, 210096, Jiangsu, People's Republic of China.
| | - Xiaoyun Wang
- Department of Neurology, Nanjing Drum Tower Hospital, Nanjing, 210008, Jiangsu, People's Republic of China.
| |
Collapse
|