151
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Fox SJ, Bellan SE, Perkins TA, Johansson MA, Meyers LA. Downgrading disease transmission risk estimates using terminal importations. PLoS Negl Trop Dis 2019; 13:e0007395. [PMID: 31199809 PMCID: PMC6594658 DOI: 10.1371/journal.pntd.0007395] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/13/2018] [Revised: 06/26/2019] [Accepted: 04/16/2019] [Indexed: 12/19/2022] Open
Abstract
As emerging and re-emerging infectious arboviruses like dengue, chikungunya, and Zika threaten new populations worldwide, officials scramble to assess local severity and transmissibility, with little to no epidemiological history to draw upon. Indirect estimates of risk from vector habitat suitability maps are prone to great uncertainty, while direct estimates from epidemiological data are only possible after cases accumulate and, given environmental constraints on arbovirus transmission, cannot be widely generalized beyond the focal region. Combining these complementary methods, we use disease importation and transmission data to improve the accuracy and precision of a priori ecological risk estimates. We demonstrate this approach by estimating the spatiotemporal risks of Zika virus transmission throughout Texas, a high-risk region in the southern United States. Our estimates are, on average, 80% lower than published ecological estimates-with only six of 254 Texas counties deemed capable of sustaining a Zika epidemic-and they are consistent with the number of autochthonous cases detected in 2017. Importantly our method provides a framework for model comparison, as our mechanistic understanding of arbovirus transmission continues to improve. Real-time updating of prior risk estimates as importations and outbreaks arise can thereby provide critical, early insight into local transmission risks as emerging arboviruses expand their global reach.
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Affiliation(s)
- Spencer J. Fox
- Department of Integrative Biology, University of Texas at Austin, Austin, Texas, United States of America
| | - Steven E. Bellan
- Department of Epidemiology and Biostatistics, University of Georgia, Athens, Georgia, United States of America
- Center for Ecology of Infectious Diseases, University of Georgia, Athens, Gerogia, United States of America
| | - T. Alex Perkins
- Department of Biological Sciences and Eck Institute for Global Health, University of Notre Dame, Notre Dame, Indiana, United States of America
| | - Michael A. Johansson
- Division of Vector-Borne Diseases, Centers for Disease Control and Prevention, San Juan, Puerto Rico
- Center for Communicable Disease Dynamics, Harvard TH Chan School of Public Health, Boston, Massachusetts, United States of America
| | - Lauren Ancel Meyers
- Department of Integrative Biology, University of Texas at Austin, Austin, Texas, United States of America
- Santa Fe Institute, Santa Fe, New Mexico, United States of America
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152
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Predicting aquatic development and mortality rates of Aedes aegypti. PLoS One 2019; 14:e0217199. [PMID: 31112566 PMCID: PMC6528993 DOI: 10.1371/journal.pone.0217199] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/25/2018] [Accepted: 05/07/2019] [Indexed: 12/25/2022] Open
Abstract
Mosquito-borne pathogens continue to be a significant burden within human populations, with Aedes aegypti continuing to spread dengue, chikungunya, and Zika virus throughout the world. Using data from a previously conducted study, a linear regression model was constructed to predict the aquatic development rates based on the average temperature, temperature fluctuation range, and larval density. Additional experiments were conducted with different parameters of average temperature and larval density to validate the model. Using a paired t-test, the model predictions were compared to experimental data and showed that the prediction models were not significantly different for average pupation rate, adult emergence rate, and juvenile mortality rate. The models developed will be useful for modeling and estimating the upper limit of the number of Aedes aegypti in the environment under different temperature, diurnal temperature variations, and larval densities.
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153
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Liu B, Gao X, Ma J, Jiao Z, Xiao J, Hayat MA, Wang H. Modeling the present and future distribution of arbovirus vectors Aedes aegypti and Aedes albopictus under climate change scenarios in Mainland China. THE SCIENCE OF THE TOTAL ENVIRONMENT 2019; 664:203-214. [PMID: 30743113 DOI: 10.1016/j.scitotenv.2019.01.301] [Citation(s) in RCA: 57] [Impact Index Per Article: 11.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/23/2018] [Revised: 01/17/2019] [Accepted: 01/23/2019] [Indexed: 06/09/2023]
Abstract
Aedes aegypti and Aedes albopictus are two important mosquito species which transmit various infectious arbovirus diseases represented mainly by dengue fever. These two species of mosquito have a wide range of distribution and strong transfer capacity. With ongoing global climate change, we are facing an increasing public health threat from the rapid spread of vectors in wider geographical areas. Based on observed occurrence records of Ae. aegypti and Ae. albopictus and high-resolution environmental layers reflecting climate and land-use conditions, a Maxent niche modeling approach was adopted to model the current and future distribution of both species in Mainland China. Our models provide predictions of suitable habitat shifts under future climate scenarios up to the 2050s. Both species were predicted to expand their niche range to varying degrees under future climate scenarios. Aedes aegypti was modeled to expand its habitat from Guangdong, Guangxi, Yunnan and Hainan to Fujian, Jiangxi and Guizhou. Aedes albopictus was modeled to increase magnitude of distribution within its present range of northern, southwestern and southeastern coastal areas of Mainland China. Area and population exposed to mosquitoes are predicted to increase significantly. Environmental variables that have significant impact on the distribution of mosquitoes are also revealed by our model. The results of our study can be referenced in further ecological studies and will guide the development of strategies for the prevention and control of mosquito-borne diseases.
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Affiliation(s)
- Boyang Liu
- Department of Veterinary Surgery, College of Veterinary Medicine, Northeast Agricultural University, Harbin, Heilongjiang Province, People's Republic of China; Key Laboratory of the Provincial Education Department of Heilongjiang for Common Animal Disease Prevention and Treatment, College of Veterinary Medicine, Northeast Agricultural University, Harbin, Heilongjiang Province, People's Republic of China
| | - Xiang Gao
- Department of Veterinary Surgery, College of Veterinary Medicine, Northeast Agricultural University, Harbin, Heilongjiang Province, People's Republic of China; Key Laboratory of the Provincial Education Department of Heilongjiang for Common Animal Disease Prevention and Treatment, College of Veterinary Medicine, Northeast Agricultural University, Harbin, Heilongjiang Province, People's Republic of China
| | - Jun Ma
- Department of Veterinary Surgery, College of Veterinary Medicine, Northeast Agricultural University, Harbin, Heilongjiang Province, People's Republic of China; Key Laboratory of the Provincial Education Department of Heilongjiang for Common Animal Disease Prevention and Treatment, College of Veterinary Medicine, Northeast Agricultural University, Harbin, Heilongjiang Province, People's Republic of China
| | - Zhihui Jiao
- Department of Veterinary Surgery, College of Veterinary Medicine, Northeast Agricultural University, Harbin, Heilongjiang Province, People's Republic of China; Key Laboratory of the Provincial Education Department of Heilongjiang for Common Animal Disease Prevention and Treatment, College of Veterinary Medicine, Northeast Agricultural University, Harbin, Heilongjiang Province, People's Republic of China
| | - Jianhua Xiao
- Department of Veterinary Surgery, College of Veterinary Medicine, Northeast Agricultural University, Harbin, Heilongjiang Province, People's Republic of China; Key Laboratory of the Provincial Education Department of Heilongjiang for Common Animal Disease Prevention and Treatment, College of Veterinary Medicine, Northeast Agricultural University, Harbin, Heilongjiang Province, People's Republic of China
| | - Muhammad Abid Hayat
- Department of Veterinary Surgery, College of Veterinary Medicine, Northeast Agricultural University, Harbin, Heilongjiang Province, People's Republic of China
| | - Hongbin Wang
- Department of Veterinary Surgery, College of Veterinary Medicine, Northeast Agricultural University, Harbin, Heilongjiang Province, People's Republic of China; Key Laboratory of the Provincial Education Department of Heilongjiang for Common Animal Disease Prevention and Treatment, College of Veterinary Medicine, Northeast Agricultural University, Harbin, Heilongjiang Province, People's Republic of China.
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154
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Kraemer MUG, Reiner RC, Brady OJ, Messina JP, Gilbert M, Pigott DM, Yi D, Johnson K, Earl L, Marczak LB, Shirude S, Davis Weaver N, Bisanzio D, Perkins TA, Lai S, Lu X, Jones P, Coelho GE, Carvalho RG, Van Bortel W, Marsboom C, Hendrickx G, Schaffner F, Moore CG, Nax HH, Bengtsson L, Wetter E, Tatem AJ, Brownstein JS, Smith DL, Lambrechts L, Cauchemez S, Linard C, Faria NR, Pybus OG, Scott TW, Liu Q, Yu H, Wint GRW, Hay SI, Golding N. Past and future spread of the arbovirus vectors Aedes aegypti and Aedes albopictus. Nat Microbiol 2019; 4:854-863. [PMID: 30833735 PMCID: PMC6522366 DOI: 10.1038/s41564-019-0376-y] [Citation(s) in RCA: 536] [Impact Index Per Article: 107.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/20/2018] [Accepted: 01/18/2019] [Indexed: 12/20/2022]
Abstract
The global population at risk from mosquito-borne diseases-including dengue, yellow fever, chikungunya and Zika-is expanding in concert with changes in the distribution of two key vectors: Aedes aegypti and Aedes albopictus. The distribution of these species is largely driven by both human movement and the presence of suitable climate. Using statistical mapping techniques, we show that human movement patterns explain the spread of both species in Europe and the United States following their introduction. We find that the spread of Ae. aegypti is characterized by long distance importations, while Ae. albopictus has expanded more along the fringes of its distribution. We describe these processes and predict the future distributions of both species in response to accelerating urbanization, connectivity and climate change. Global surveillance and control efforts that aim to mitigate the spread of chikungunya, dengue, yellow fever and Zika viruses must consider the so far unabated spread of these mosquitos. Our maps and predictions offer an opportunity to strategically target surveillance and control programmes and thereby augment efforts to reduce arbovirus burden in human populations globally.
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Affiliation(s)
- Moritz U G Kraemer
- Department of Zoology, University of Oxford, Oxford, UK.
- Harvard Medical School, Harvard University, Boston, MA, USA.
- Boston Children's Hospital, Boston, MA, USA.
| | - Robert C Reiner
- Institute for Health Metrics and Evaluation, University of Washington, Seattle, WA, USA
| | - Oliver J Brady
- Centre for Mathematical Modelling of Infectious Diseases, London School of Hygiene and Tropical Medicine, London, UK
- Department of Infectious Disease Epidemiology, London School of Hygiene and Tropical Medicine, London, UK
| | - Jane P Messina
- School of Geography and the Environment, University of Oxford, Oxford, UK
- Oxford School of Global and Area Studies, University of Oxford, Oxford, UK
| | - Marius Gilbert
- Spatial Epidemiology Lab (SpELL), Universite Libre de Bruxelles, Brussels, Belgium
- Fonds National de la Recherche Scientifique, Brussels, Belgium
| | - David M Pigott
- Institute for Health Metrics and Evaluation, University of Washington, Seattle, WA, USA
| | - Dingdong Yi
- Department of Statistics, Harvard University, Cambridge, MA, USA
| | - Kimberly Johnson
- Institute for Health Metrics and Evaluation, University of Washington, Seattle, WA, USA
| | - Lucas Earl
- Institute for Health Metrics and Evaluation, University of Washington, Seattle, WA, USA
| | - Laurie B Marczak
- Institute for Health Metrics and Evaluation, University of Washington, Seattle, WA, USA
| | - Shreya Shirude
- Institute for Health Metrics and Evaluation, University of Washington, Seattle, WA, USA
| | - Nicole Davis Weaver
- Institute for Health Metrics and Evaluation, University of Washington, Seattle, WA, USA
| | - Donal Bisanzio
- RTI International, Washington, DC, USA
- Epidemiology and Public Health Division, School of Medicine, University of Nottingham, Nottingham, UK
| | - T Alex Perkins
- Department of Biological Sciences and Eck Institute for Global Health, University of Notre Dame, Notre Dame, IN, USA
| | - Shengjie Lai
- School of Health, Fudan University, Key Laboratory of Public Health Safety, Ministry of Education, Shanghai, China
- Department of Geography and Environment, University of Southampton, Southampton, UK
- Flowminder Foundation, Stockholm, Sweden
| | - Xin Lu
- School of Business, Central South University, Changsha, China
- College of Systems Engineering, National University of Defense Technology, Changsha, China
- School of Business Administration, Southwestern University of Finance and Economics, Chengdu, China
| | - Peter Jones
- Waen Associates Ltd, Y Waen, Islaw'r Dref, Dolgellau, Gwynedd, UK
| | | | | | - Wim Van Bortel
- European Centre for Disease Prevention and Control, Stockholm, Sweden
- Institute of Tropical Medicine, Antwerp, Belgium
| | | | | | | | - Chester G Moore
- Department of Microbiology, Immunology, and Pathology, Colorado State University, Fort Collins, CO, USA
| | - Heinrich H Nax
- Computational Social Science, ETH Zurich, Zurich, Switzerland
| | - Linus Bengtsson
- Flowminder Foundation, Stockholm, Sweden
- Department of Public Health Sciences, Karolinska Institutet, Stockholm, Sweden
| | - Erik Wetter
- Flowminder Foundation, Stockholm, Sweden
- Stockholm School of Economics, Stockholm, Sweden
| | - Andrew J Tatem
- Department of Geography and Environment, University of Southampton, Southampton, UK
- Flowminder Foundation, Stockholm, Sweden
| | - John S Brownstein
- Harvard Medical School, Harvard University, Boston, MA, USA
- Boston Children's Hospital, Boston, MA, USA
| | - David L Smith
- Institute for Health Metrics and Evaluation, University of Washington, Seattle, WA, USA
| | - Louis Lambrechts
- Insect-Virus Interactions Unit, Institut Pasteur, CNRS, UMR2000, Paris, France
| | - Simon Cauchemez
- Mathematical Modelling of Infectious Diseases Unit, Institut Pasteur, CNRS, UMR2000, Paris, France
| | - Catherine Linard
- Spatial Epidemiology Lab (SpELL), Universite Libre de Bruxelles, Brussels, Belgium
- Department of Geography, Universite de Namur, Namur, Belgium
| | - Nuno R Faria
- Department of Zoology, University of Oxford, Oxford, UK
| | | | - Thomas W Scott
- Department of Entomology and Nematology, University of California, Davis, Davis, CA, USA
| | - Qiyong Liu
- State Key Laboratory of Infectious Disease Prevention and Control, Collaborative Innovation Center for Diagnosis and Treatment of Infectious Diseases, National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Changping, Beijing, China
- Shandong University Climate Change and Health Center, School of Public Health, Shandong University, Jinan, Shandong, China
- WHO Collaborating Centre for Vector Surveillance and Management, Beijing, China
- Chongqing Centre for Disease Control and Prevention, Chongqing, China
| | - Hongjie Yu
- School of Health, Fudan University, Key Laboratory of Public Health Safety, Ministry of Education, Shanghai, China
| | - G R William Wint
- Department of Zoology, University of Oxford, Oxford, UK
- Environmental Research Group Oxford (ERGO), Department of Zoology, Oxford University, Oxford, UK
| | - Simon I Hay
- Institute for Health Metrics and Evaluation, University of Washington, Seattle, WA, USA.
| | - Nick Golding
- School of BioSciences, University of Melbourne, Parkville, Victoria, Australia.
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155
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Reiner RC, Stoddard ST, Vazquez-Prokopec GM, Astete H, Perkins TA, Sihuincha M, Stancil JD, Smith DL, Kochel TJ, Halsey ES, Kitron U, Morrison AC, Scott TW. Estimating the impact of city-wide Aedes aegypti population control: An observational study in Iquitos, Peru. PLoS Negl Trop Dis 2019; 13:e0007255. [PMID: 31145744 PMCID: PMC6542505 DOI: 10.1371/journal.pntd.0007255] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/19/2018] [Accepted: 02/21/2019] [Indexed: 12/18/2022] Open
Abstract
During the last 50 years, the geographic range of the mosquito Aedes aegypti has increased dramatically, in parallel with a sharp increase in the disease burden from the viruses it transmits, including Zika, chikungunya, and dengue. There is a growing consensus that vector control is essential to prevent Aedes-borne diseases, even as effective vaccines become available. What remains unclear is how effective vector control is across broad operational scales because the data and the analytical tools necessary to isolate the effect of vector-oriented interventions have not been available. We developed a statistical framework to model Ae. aegypti abundance over space and time and applied it to explore the impact of citywide vector control conducted by the Ministry of Health (MoH) in Iquitos, Peru, over a 12-year period. Citywide interventions involved multiple rounds of intradomicile insecticide space spray over large portions of urban Iquitos (up to 40% of all residences) in response to dengue outbreaks. Our model captured significant levels of spatial, temporal, and spatio-temporal variation in Ae. aegypti abundance within and between years and across the city. We estimated the shape of the relationship between the coverage of neighborhood-level vector control and reductions in female Ae. aegypti abundance; i.e., the dose-response curve. The dose-response curve, with its associated uncertainties, can be used to gauge the necessary spraying effort required to achieve a desired effect and is a critical tool currently absent from vector control programs. We found that with complete neighborhood coverage MoH intra-domicile space spray would decrease Ae. aegypti abundance on average by 67% in the treated neighborhood. Our framework can be directly translated to other interventions in other locations with geolocated mosquito abundance data. Results from our analysis can be used to inform future vector-control applications in Ae. aegypti endemic areas globally.
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Affiliation(s)
- Robert C. Reiner
- Institute for Health Metrics and Evaluation, Department of Global Health, Schools of Medicine and Public Health, University of Washington, WA, United States of America
- Fogarty International Center, National Institutes of Health, Bethesda, MD, United States of America
| | - Steven T. Stoddard
- Fogarty International Center, National Institutes of Health, Bethesda, MD, United States of America
- School of Public Health, San Diego State University, San Diego, CA, United States of America
| | - Gonzalo M. Vazquez-Prokopec
- Fogarty International Center, National Institutes of Health, Bethesda, MD, United States of America
- Department of Environmental Sciences, Emory University, Atlanta, GA, United States of America
| | | | - T. Alex Perkins
- Fogarty International Center, National Institutes of Health, Bethesda, MD, United States of America
- Department of Biological Sciences and Eck Institute for Global Health, University of Notre Dame, Notre Dame, IN, United States of America
| | | | | | - David L. Smith
- Institute for Health Metrics and Evaluation, Department of Global Health, Schools of Medicine and Public Health, University of Washington, WA, United States of America
- Fogarty International Center, National Institutes of Health, Bethesda, MD, United States of America
| | | | | | - Uriel Kitron
- Fogarty International Center, National Institutes of Health, Bethesda, MD, United States of America
- Department of Environmental Sciences, Emory University, Atlanta, GA, United States of America
| | - Amy C. Morrison
- U.S. Naval Medical Research Unit N0.6, Lima, Peru
- Department of Entomology, University of California, Davis, CA, United States of America
| | - Thomas W. Scott
- Fogarty International Center, National Institutes of Health, Bethesda, MD, United States of America
- Department of Entomology, University of California, Davis, CA, United States of America
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156
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Effects of climate change on vector-borne diseases: an updated focus on West Nile virus in humans. Emerg Top Life Sci 2019; 3:143-152. [DOI: 10.1042/etls20180124] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/10/2019] [Revised: 03/31/2019] [Accepted: 04/05/2019] [Indexed: 11/17/2022]
Abstract
Abstract
One of the main impacts of climate change on health is the influence on vector-borne diseases (VBDs). During the last few years, yearly outbreaks of the West Nile virus (WNV) have occurred in many locations, providing evidence of ongoing transmission. Currently, it is the most widely distributed arbovirus in the world. Increases in ambient temperature have impacts on WNV transmission. Indeed, clear associations were found between warm conditions and WNV outbreaks in various areas. The impact of changes in rainfall patterns on the incidence of the disease is influenced by the amount of precipitation (increased rainfall, floods or droughts), depending on the local conditions and the differences in the ecology and sensitivity of the species of mosquito. Predictions indicate that for WNV, increased warming will result in latitudinal and altitudinal expansions of regions climatically suitable for transmission, particularly along the current edges of its transmission areas. Extension of the transmission season is also predicted. As models show that the current climate change trends are expected to continue, it is important to reinforce WNV control efforts and increase the resilience of population health. For a better preparedness, any assessment of future transmission of WNV should consider the impacts of the changing climate.
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157
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Climate change and the rising infectiousness of dengue. Emerg Top Life Sci 2019; 3:133-142. [PMID: 33523146 PMCID: PMC7288996 DOI: 10.1042/etls20180123] [Citation(s) in RCA: 33] [Impact Index Per Article: 6.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/27/2019] [Revised: 03/22/2019] [Accepted: 03/28/2019] [Indexed: 12/22/2022]
Abstract
The disease burden of dengue has been steadily rising over the last half-century due to a multitude of factors, including global trade and travel, urbanization, population growth, and climate variability and change, that facilitate conductive conditions for the proliferation of dengue vectors and viruses. This review describes how climate, specifically temperature, affects the vectors’ ability to cause and sustain outbreaks, and how the infectiousness of dengue is influenced by climatic change. The review is focused on the core concepts and frameworks derived in the area of epidemiology of mosquito-borne diseases and outlines the sensitivity of vectorial capacity and vector-to-human transmission on climatic conditions. It further reviews studies linking mathematical or statistical models of disease transmission to scenarios of projected climate change and provides recommendations for future research directions.
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158
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Failloux AB. [Mosquitoes as vectors of arboviruses: an endless story]. Biol Aujourdhui 2019; 212:89-99. [PMID: 30973138 DOI: 10.1051/jbio/2018026] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/10/2018] [Indexed: 11/14/2022]
Abstract
The recent emergence or re-emergence of vector-borne diseases (VBD) and, more specifically, VBD associated with arboviruses such as dengue, chikungunya, Zika or yellow fever are not new events. The globalization of trade and travels as well as the unplanned urbanization of many tropical and subtropical cities have created the conditions suitable for the establishment of vector mosquitoes offering opportunities for arbovirus introduction. This review describes the major arboviruses important for human health and their epidemic vectors, and the conditions leading to their emergence.
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Affiliation(s)
- Anna-Bella Failloux
- Institut Pasteur, Département de Virologie, Arbovirus et Insectes Vecteurs, 25 rue du Dr Roux, 75724 Paris Cedex 15, France
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159
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CRUZ-PACHECO GUSTAVO, ESTEVA LOURDES, FERREIRA CLAUDIAPIO. A MATHEMATICAL ANALYSIS OF ZIKA VIRUS EPIDEMIC IN RIO DE JANEIRO AS A VECTOR-BORNE AND SEXUALLY TRANSMITTED DISEASE. J BIOL SYST 2019. [DOI: 10.1142/s0218339019500050] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
Abstract
In this work we formulate a mathematical model to assess the importance of sexual transmission during the Zika virus outbreak that occurred in Rio de Janeiro, Brazil, in 2015. To this end, we deduce from the model an analytical expression of the basic reproduction number of Zika, [Formula: see text], in terms of the vectorial and sexual transmissions, and we use the estimations given in Ref. 1 [Villela DAM, Bastos LS, de Carvalho LM, Cruz OG, Gomes MFC, Durovni B, Lemos MC, Saraceni V, Coelho FC, Codeço CT, Zika in Rio de Janeiro: Assessment of basic reproduction number and comparison with dengue outbreaks, Epidemiol Infect 145(8):1649–1657, 2017] for the [Formula: see text] values of Zika virus and dengue virus epidemics in Rio de Janeiro to evaluate the contribution of sexual transmission of Zika virus. According to the obtained results, sexual transmission (pure plus mediated by vector transmission) contributes from 23% to 46% for the [Formula: see text] increment. Also, an asymmetric sexual transmission between men and women can explain the fact that the incidence of Zika virus in women was 60% higher than in man during the 2015 epidemics. We also carry out a sensitivity analysis using [Formula: see text] as the output parameter. The results of this analysis have shown that the transmission rate between human and mosquito populations, the mosquito mortality rate, and the human infectious period are the parameters that contribute more to the [Formula: see text] variation, highlighting the importance of vector control to halt disease transmission.
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Affiliation(s)
- GUSTAVO CRUZ-PACHECO
- IIMAS, Universidad Nacional Autónoma de México (UNAM), Ciudad Universitaria, Ciudad de México, C. P. 04510, Mexico
| | - LOURDES ESTEVA
- Facultad de Ciencias, Universidad Nacional Autónoma de México (UNAM), Ciudad Universitaria, Ciudad de México, C. P. 04510, Mexico
| | - CLAUDIA PIO FERREIRA
- Department of Biostatistics, Institute of Biosciences, São Paulo State University (UNESP), Botucatu, SP 18618-689, Brazil
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160
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Tramonte AR, Christofferson RC. Investigating the probability of establishment of Zika virus and detection through mosquito surveillance under different temperature conditions. PLoS One 2019; 14:e0214306. [PMID: 30921386 PMCID: PMC6438564 DOI: 10.1371/journal.pone.0214306] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/29/2018] [Accepted: 03/11/2019] [Indexed: 01/21/2023] Open
Abstract
Because of the increasing threat that Zika virus (ZIKV) poses to more sub-tropical area due to increased global travel, there is a need for better understanding of the effect(s) of temperature on the establishment potential of ZIKV within these subtropical, temperate, and/or seasonal Ae. aegypti populations. The first step to determining risk establishment of ZIKV in these regions is to assess ZIKV's ability to infect mosquitoes at less tropical temperatures, and thus be detected through common surveillance programs. To that end, the effect of two rearing temperatures (RT) and extrinsic incubation temperatures (EIT) on infection and dissemination rates was evaluated, as well as the interactions of such. Total, there were four combinations (RT24-EIT24, RT24-EIT28, RT28-EIT24, RT28-EIT28). Further, a stochastic SEIR framework was adapted to determine whether observed data could lead to differential success of establishment of ZIKV in naive mosquito populations. There was no consistent pattern in significant differences found across treatments for either infection or dissemination rates (p>0.05), where only a significant difference was found in infection rates between RT24-EIT24 (44%) and RT28-EIT24 (82.6%). Across all temperature conditions, the model predicted between a 76.4% and 95.4% chance of successful establishment of ZIKV in naive mosquito populations under model assumptions. We further show that excluding the maximum observed infection and dissemination rates likely overestimates the probability of local establishment of ZIKV. These results indicate that 1) there is no straightforward relationship between RT, EIT, and infection/dissemination rates, 2) in more temperate climates, ZIKV may still have the ability to establish in populations of Aedes aegypti, 3) despite an overall lack of significant differences in infection/dissemination rates, temperature may still alter the kinetics of ZIKV within the mosquito enough to affect the likelihood of infection establishment and detection within the context of mosquito surveillance programs, and 4) both the temporal and magnitude qualities of vector competence are necessary for parameterization of within-mosquito virus kinetics.
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Affiliation(s)
- A. Ryan Tramonte
- Department of Pathobiological Sciences, School of Veterinary Medicine, Louisiana State University, Baton Rouge, Louisiana, United States of America
| | - Rebecca C. Christofferson
- Department of Pathobiological Sciences, School of Veterinary Medicine, Louisiana State University, Baton Rouge, Louisiana, United States of America
- Center for Computation and Technology, Louisiana State University, Baton Rouge, Louisiana, United States of America
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161
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Tuladhar R, Singh A, Varma A, Choudhary DK. Climatic factors influencing dengue incidence in an epidemic area of Nepal. BMC Res Notes 2019; 12:131. [PMID: 30867027 PMCID: PMC6417253 DOI: 10.1186/s13104-019-4185-4] [Citation(s) in RCA: 25] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/28/2019] [Accepted: 03/11/2019] [Indexed: 12/14/2022] Open
Abstract
Objective Geographic expansion of dengue incidence has drawn a global interest to identify the influential factors that instigate the spread of this disease. The objective of this study was to find the environmental factors linked to dengue incidence in a dengue epidemic area of Nepal by negative binomial models using climatic factors from 2010 to 2017. Results Minimum temperature at lag 2 months, maximum temperature and relative humidity without lag period significantly affected dengue incidence. Rainfall was not associated with dengue incidence in Chitwan district of Nepal. The incident rate ratio (IRR) of dengue case rise by more than 1% for every unit increase in minimum temperature at lag 2 months, maximum temperature and relative humidity, but decrease by .759% for maximum temperature at lag 3 months. Considering the effect of minimum temperature of previous months on dengue incidence, the vector control and dengue management program should be implemented at least 2 months ahead of dengue outbreak season. Electronic supplementary material The online version of this article (10.1186/s13104-019-4185-4) contains supplementary material, which is available to authorized users.
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Affiliation(s)
- Reshma Tuladhar
- Central Department of Microbiology, Tribhuvan University, Kathmandu, Nepal. .,Amity Institute of Microbial Technology, Amity University, Noida, UP, India.
| | - Anjana Singh
- Central Department of Microbiology, Tribhuvan University, Kathmandu, Nepal
| | - Ajit Varma
- Amity Institute of Microbial Technology, Amity University, Noida, UP, India
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Perkins TA, Reiner RC, España G, ten Bosch QA, Verma A, Liebman KA, Paz-Soldan VA, Elder JP, Morrison AC, Stoddard ST, Kitron U, Vazquez-Prokopec GM, Scott TW, Smith DL. An agent-based model of dengue virus transmission shows how uncertainty about breakthrough infections influences vaccination impact projections. PLoS Comput Biol 2019; 15:e1006710. [PMID: 30893294 PMCID: PMC6443188 DOI: 10.1371/journal.pcbi.1006710] [Citation(s) in RCA: 16] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/12/2018] [Revised: 04/01/2019] [Accepted: 12/11/2018] [Indexed: 01/26/2023] Open
Abstract
Prophylactic vaccination is a powerful tool for reducing the burden of infectious diseases, due to a combination of direct protection of vaccinees and indirect protection of others via herd immunity. Computational models play an important role in devising strategies for vaccination by making projections of its impacts on public health. Such projections are subject to uncertainty about numerous factors, however. For example, many vaccine efficacy trials focus on measuring protection against disease rather than protection against infection, leaving the extent of breakthrough infections (i.e., disease ameliorated but infection unimpeded) among vaccinees unknown. Our goal in this study was to quantify the extent to which uncertainty about breakthrough infections results in uncertainty about vaccination impact, with a focus on vaccines for dengue. To realistically account for the many forms of heterogeneity in dengue virus (DENV) transmission, which could have implications for the dynamics of indirect protection, we used a stochastic, agent-based model for DENV transmission informed by more than a decade of empirical studies in the city of Iquitos, Peru. Following 20 years of routine vaccination of nine-year-old children at 80% coverage, projections of the proportion of disease episodes averted varied by a factor of 1.76 (95% CI: 1.54-2.06) across the range of uncertainty about breakthrough infections. This was equivalent to the range of vaccination impact projected across a range of uncertainty about vaccine efficacy of 0.268 (95% CI: 0.210-0.329). Until uncertainty about breakthrough infections can be addressed empirically, our results demonstrate the importance of accounting for it in models of vaccination impact.
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Affiliation(s)
- T. Alex Perkins
- Department of Biological Sciences and Eck Institute for Global Health, University of Notre Dame, Notre Dame, IN, United States of America
- Fogarty International Center, National Institutes of Health, Bethesda, MD, United States of America
| | - Robert C. Reiner
- Fogarty International Center, National Institutes of Health, Bethesda, MD, United States of America
- Department of Epidemiology and Biostatistics, Indiana University, Bloomington, IN, United States of America
| | - Guido España
- Department of Biological Sciences and Eck Institute for Global Health, University of Notre Dame, Notre Dame, IN, United States of America
| | - Quirine A. ten Bosch
- Department of Biological Sciences and Eck Institute for Global Health, University of Notre Dame, Notre Dame, IN, United States of America
| | - Amit Verma
- Department of Biostatistics and Bioinformatics, Emory University, Atlanta, GA
| | - Kelly A. Liebman
- Department of Entomology and Nematology, University of California, Davis, CA, United States of America
| | - Valerie A. Paz-Soldan
- Department of Global Community Health and Behavioral Sciences, Tulane University School of Public Health and Tropical Medicine, New Orleans, LA, United States of America
| | - John P. Elder
- Institute for Behavioral and Community Health, Graduate School of Public Health, San Diego State University, San Diego, CA, United States of America
| | - Amy C. Morrison
- Department of Entomology and Nematology, University of California, Davis, CA, United States of America
| | - Steven T. Stoddard
- Institute for Behavioral and Community Health, Graduate School of Public Health, San Diego State University, San Diego, CA, United States of America
| | - Uriel Kitron
- Fogarty International Center, National Institutes of Health, Bethesda, MD, United States of America
- Department of Environmental Sciences, Emory University, Atlanta, GA, United States of America
| | - Gonzalo M. Vazquez-Prokopec
- Fogarty International Center, National Institutes of Health, Bethesda, MD, United States of America
- Department of Environmental Sciences, Emory University, Atlanta, GA, United States of America
| | - Thomas W. Scott
- Fogarty International Center, National Institutes of Health, Bethesda, MD, United States of America
- Department of Entomology and Nematology, University of California, Davis, CA, United States of America
| | - David L. Smith
- Fogarty International Center, National Institutes of Health, Bethesda, MD, United States of America
- Institute for Health Metrics and Evaluation, University of Washington, Seattle, WA, United States of America
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163
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Ryan SJ, Carlson CJ, Mordecai EA, Johnson LR. Global expansion and redistribution of Aedes-borne virus transmission risk with climate change. PLoS Negl Trop Dis 2019; 13:e0007213. [PMID: 30921321 PMCID: PMC6438455 DOI: 10.1371/journal.pntd.0007213] [Citation(s) in RCA: 344] [Impact Index Per Article: 68.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/11/2018] [Accepted: 02/04/2019] [Indexed: 12/22/2022] Open
Abstract
Forecasting the impacts of climate change on Aedes-borne viruses-especially dengue, chikungunya, and Zika-is a key component of public health preparedness. We apply an empirically parameterized model of viral transmission by the vectors Aedes aegypti and Ae. albopictus, as a function of temperature, to predict cumulative monthly global transmission risk in current climates, and compare them with projected risk in 2050 and 2080 based on general circulation models (GCMs). Our results show that if mosquito range shifts track optimal temperature ranges for transmission (21.3-34.0°C for Ae. aegypti; 19.9-29.4°C for Ae. albopictus), we can expect poleward shifts in Aedes-borne virus distributions. However, the differing thermal niches of the two vectors produce different patterns of shifts under climate change. More severe climate change scenarios produce larger population exposures to transmission by Ae. aegypti, but not by Ae. albopictus in the most extreme cases. Climate-driven risk of transmission from both mosquitoes will increase substantially, even in the short term, for most of Europe. In contrast, significant reductions in climate suitability are expected for Ae. albopictus, most noticeably in southeast Asia and west Africa. Within the next century, nearly a billion people are threatened with new exposure to virus transmission by both Aedes spp. in the worst-case scenario. As major net losses in year-round transmission risk are predicted for Ae. albopictus, we project a global shift towards more seasonal risk across regions. Many other complicating factors (like mosquito range limits and viral evolution) exist, but overall our results indicate that while climate change will lead to increased net and new exposures to Aedes-borne viruses, the most extreme increases in Ae. albopictus transmission are predicted to occur at intermediate climate change scenarios.
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Affiliation(s)
- Sadie J. Ryan
- Department of Geography, University of Florida, Gainesville, Florida, United States of America
- Emerging Pathogens Institute, University of Florida, Gainesville, Florida, United States of America
- School of Life Sciences, University of KwaZulu-Natal, Durban, South Africa
| | - Colin J. Carlson
- Department of Biology, Georgetown University, Washington, DC, United States of America
- National Socio-Environmental Synthesis Center, University of Maryland, Annapolis, Maryland, United States of America
| | - Erin A. Mordecai
- Department of Biology, Stanford University, Stanford, California, United States of America
| | - Leah R. Johnson
- Department of Statistics, Virginia Polytechnic and State University, Blacksburg, Virginia, United States of America
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Bond JG, Osorio AR, Avila N, Gómez-Simuta Y, Marina CF, Fernández-Salas I, Liedo P, Dor A, Carvalho DO, Bourtzis K, Williams T. Optimization of irradiation dose to Aedes aegypti and Ae. albopictus in a sterile insect technique program. PLoS One 2019; 14:e0212520. [PMID: 30779779 PMCID: PMC6380561 DOI: 10.1371/journal.pone.0212520] [Citation(s) in RCA: 32] [Impact Index Per Article: 6.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/26/2018] [Accepted: 02/04/2019] [Indexed: 12/20/2022] Open
Abstract
The sterile insect technique (SIT) may offer a means to control the transmission of mosquito borne diseases. SIT involves the release of male insects that have been sterilized by exposure to ionizing radiation. We determined the effects of different doses of radiation on the survival and reproductive capacity of local strains of Aedes aegypti and Ae. albopictus in southern Mexico. The survival of irradiated pupae was invariably greater than 90% and did not differ significantly in either sex for either species. Irradiation had no significant adverse effects on the flight ability (capacity to fly out of a test device) of male mosquitoes, which consistently exceeded 91% in Ae. aegypti and 96% in Ae. albopictus. The average number of eggs laid per female was significantly reduced in Ae. aegypti at doses of 15 and 30 Gy and no eggs were laid by females that had been exposed to 50 Gy. Similarly, in Ae. albopictus, egg production was reduced at doses of 15 and 25 Gy and was eliminated at 35 Gy. In Ae. aegypti, fertility in males was eliminated at 70 Gy and was eliminated at 30 Gy in females, whereas in Ae. albopictus, the fertility of males that mated with untreated females was almost zero (0.1%) in the 50 Gy treatment and female fertility was eliminated at 35 Gy. Irradiation treatments resulted in reduced ovary length and fewer follicles in both species. The adult median survival time of both species was reduced by irradiation in a dose-dependent manner. However, sterilizing doses of 35 Gy and 50 Gy resulted in little reduction in survival times of males of Ae. albopictus and Ae. aegypti, respectively, indicating that these doses should be suitable for future evaluations of SIT-based control of these species. The results of the present study will be applied to studies of male sexual competitiveness and to stepwise evaluations of the sterile insect technique for population suppression of these vectors in Mexico.
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Affiliation(s)
- J. Guillermo Bond
- Centro Regional de Investigación en Salud Pública (CRISP-INSP), Tapachula, Chiapas, Mexico
| | - Adriana R. Osorio
- Centro Regional de Investigación en Salud Pública (CRISP-INSP), Tapachula, Chiapas, Mexico
| | - Nancy Avila
- Centro Regional de Investigación en Salud Pública (CRISP-INSP), Tapachula, Chiapas, Mexico
| | - Yeudiel Gómez-Simuta
- Programa Moscas de la Fruta (SAGARPA-IICA), Camino a Cacaotales S/N, Metapa de Domínguez, Chiapas, Mexico
| | - Carlos F. Marina
- Centro Regional de Investigación en Salud Pública (CRISP-INSP), Tapachula, Chiapas, Mexico
| | - Ildefonso Fernández-Salas
- Centro Regional de Investigación en Salud Pública (CRISP-INSP), Tapachula, Chiapas, Mexico
- Facultad de Ciencias Biológicas, Universidad Autónoma de Nuevo León, Nuevo León, Mexico
| | - Pablo Liedo
- El Colegio de la Frontera Sur, Tapachula, Chiapas, Mexico
| | - Ariane Dor
- El Colegio de la Frontera Sur, Tapachula, Chiapas, Mexico
| | - Danilo O. Carvalho
- Insect Pest Control Laboratory, Joint FAO/IAEA Programme of Nuclear Techniques in Food and Agriculture, IAEA Laboratories, Seibersdorf, Austria
| | - Kostas Bourtzis
- Insect Pest Control Laboratory, Joint FAO/IAEA Programme of Nuclear Techniques in Food and Agriculture, IAEA Laboratories, Seibersdorf, Austria
| | - Trevor Williams
- Instituto de Ecología AC (INECOL), Xalapa, Veracruz, Mexico
- * E-mail:
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Sampieri CL, Montero H. Breastfeeding in the time of Zika: a systematic literature review. PeerJ 2019; 7:e6452. [PMID: 30809448 PMCID: PMC6385688 DOI: 10.7717/peerj.6452] [Citation(s) in RCA: 17] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/21/2018] [Accepted: 01/15/2019] [Indexed: 12/11/2022] Open
Abstract
Background The disease Zika is considered as emergent. The infection can be acquired through different routes: a bite from the Aedes mosquito, sexual contact, from mother to child during pregnancy and by blood transfusion. The possibility of Zika transmission through human lactation has been considered. Zika is a disease of great concern for public health because it has been associated with neonatal and postnatal microcephaly, among other birth defects. Objectives To review published evidence of the probable transmission of Zika through human lactation. Data sources Electronic databases: Cochrane Central Register of Controlled Trials, EBSCO, Gale, Science Direct, Scopus, US National Library of Medicine (PubMed) and Web of Science. World Health Organization and Centers for Disease Control and Prevention web pages. Study eligibility criteria To be eligible, studies of any design had to provide primary data of human breast milk as a potential fluid for the transmission of Zika, or primary or secondary follow-up data of infants with at least one previous published study that complied with the first criterion of eligibility. Participants Studies about women with suspected, probable or confirmed Zika during pregnancy, or the postnatal period and beyond. Studies about infants who breastfeed directly from the breast or where fed with the expressed breast milk of the suspected, probable or confirmed women with Zika. Results This study only chose data from research papers; no patients were taken directly by the authors. A total of 1,146 were screened and nine studies were included in the qualitative synthesis, from which a total of 10 cases were identified, with documented follow-up in three of these cases. Through the timing of maternal Zika infection, five cases were classified as prenatal (time before delivery), one as immediate postnatal (period from 0 to 4 days after birth); no cases were classified as medium postnatal (period from 5 days to 8 weeks after birth); two were classified as long postnatal (period from 8 weeks to 6 months after birth) and two as beyond six months after birth. Conclusion Human milk may be considered as a potentially infectious fluid, but we found no currently documented studies of the long-term complications in infants up to 32 months of age, with suspected, probable or confirmed Zika through human lactation, or evidence with respect to the human pathophysiology of the infection acquired through human lactation. In the light of the studies reviewed here, the World Health Organization recommendation of June 29th 2016, remains valid: “the benefits of breastfeeding for the infant and mother outweigh any potential risk of Zika virus transmission through breast milk.”
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Affiliation(s)
- Clara Luz Sampieri
- Instituto de Salud Pública, Universidad Veracruzana, Xalapa, Veracruz, México
| | - Hilda Montero
- Instituto de Salud Pública, Universidad Veracruzana, Xalapa, Veracruz, México
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166
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Marklewitz M, Junglen S. Evolutionary and ecological insights into the emergence of arthropod-borne viruses. Acta Trop 2019; 190:52-58. [PMID: 30339799 DOI: 10.1016/j.actatropica.2018.10.006] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/24/2018] [Revised: 09/19/2018] [Accepted: 10/12/2018] [Indexed: 02/05/2023]
Abstract
The emergence of arthropod-borne viruses (arboviruses) is of global concern as they can rapidly spread across countries and to new continents as the recent examples of chikungunya virus and Zika virus have demonstrated. Whereas the global movement patterns of emerging arboviruses are comparatively well studied, there is little knowledge on initial emergence processes that enable sylvatic (enzootic) viruses to leave their natural amplification cycle and infect humans or livestock, often also involving infection of anthropophilic vector species. Emerging arboviruses almost exclusively originate in highly biodiverse ecosystems of tropical countries. Changes in host population diversity and density can affect pathogen transmission patterns and are likely to influence arbovirus emergence processes. This review focuses on concepts from disease ecology, explaining the interplay between biodiversity and pathogen emergence.
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Affiliation(s)
- Marco Marklewitz
- Charité - Universitätsmedizin Berlin, corporate member of Free University Berlin, Humboldt-University Berlin, and Berlin Institute of Health, Germany; German Center for Infection Research (DZIF), Germany
| | - Sandra Junglen
- Charité - Universitätsmedizin Berlin, corporate member of Free University Berlin, Humboldt-University Berlin, and Berlin Institute of Health, Germany; German Center for Infection Research (DZIF), Germany.
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167
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Carbajo AE, Cardo MV, Vezzani D. Past, present and future of Aedes aegypti in its South American southern distribution fringe: What do temperature and population tell us? Acta Trop 2019; 190:149-156. [PMID: 30458122 DOI: 10.1016/j.actatropica.2018.11.017] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/02/2018] [Revised: 10/30/2018] [Accepted: 11/15/2018] [Indexed: 11/30/2022]
Abstract
Aedes aegypti (Diptera: Culicidae) (Linnaeus) is currently the major threat among arbovirus vectors in the Americas. We examined its past, present, and future distribution patterns in the South American fringe in association with environmental and demographic variables at two spatial scales. We updated the database of the occurrence of Ae. aegypti per locality and modelled by GLMM the past occurrence (until 2000) and its expansion (2001-2017) as a function of air temperature, precipitation, altitude, and population. We also conducted a field survey in 7 pairs of urban/rural cemeteries along the entire temperature range within the expansion region. At both scales, mean annual air temperature and human population were significantly associated with the distribution of Ae. aegypti. Projection of the expansion models for 2030 under two climatic change scenarios showed a vast infestation, mainly driven by the shift of the 16 °C isotherm. We postulate a quantitative compromise between air temperature and human population associated with vector occurrence, along with potential thresholds for their mutual favourability.
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Affiliation(s)
- A E Carbajo
- Universidad Nacional de San Martín, Instituto de Investigación e Ingeniería Ambiental, Laboratorio de Ecología de Enfermedades Transmitidas por Vectores, General San Martín, Buenos Aires, Argentina; Consejo Nacional de Investigaciones Científicas y Técnicas, Buenos Aires, Argentina.
| | - M V Cardo
- Universidad Nacional de San Martín, Instituto de Investigación e Ingeniería Ambiental, Laboratorio de Ecología de Enfermedades Transmitidas por Vectores, General San Martín, Buenos Aires, Argentina; Consejo Nacional de Investigaciones Científicas y Técnicas, Buenos Aires, Argentina
| | - D Vezzani
- Consejo Nacional de Investigaciones Científicas y Técnicas, Buenos Aires, Argentina; Instituto Multidisciplinario sobre Ecosistemas y Desarrollo Sustentable, Universidad Nacional del Centro de la Provincia de Buenos Aires - CIC, Tandil, Provincia de Buenos Aires, Argentina
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168
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Tuladhar R, Singh A, Banjara MR, Gautam I, Dhimal M, Varma A, Choudhary DK. Effect of meteorological factors on the seasonal prevalence of dengue vectors in upland hilly and lowland Terai regions of Nepal. Parasit Vectors 2019; 12:42. [PMID: 30658693 PMCID: PMC6339416 DOI: 10.1186/s13071-019-3304-3] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/20/2018] [Accepted: 01/07/2019] [Indexed: 11/16/2022] Open
Abstract
Background The expansion of dengue vectors from lowland plains to the upland hilly regions of Nepal suggests the likelihood of increased risk of dengue. Our objective was to assess the effects of meteorological variables on vector indices and populations of dengue vectors in two different ecological regions of Nepal. An entomological survey was conducted in Kathmandu and Lalitpur (upland) and Chitwan (lowland) of Nepal in three different seasons from July 2015 to May 2016. The effect of meteorological variables on vector indices (house index, container index and Breteau index) and Aedes spp. population abundance was analyzed. A gamma regression was used to fit the models for vector indices and a negative binomial regression was used to model Aedes spp. population abundance. Results Monsoon season showed higher values for vector indices and vector populations compared to post-monsoon and pre-monsoon. Overall, the factor temperature-rainfall effect had a more significant influence on vector indices compared to relative humidity. The regression models showed that relative humidity has a greater impact in Chitwan than in Kathmandu. Variation was observed in the effect of predictor variables on Aedes aegypti and Ae. albopictus abundance. Conclusions Temperature and rainfall contribute to the vector indices in the upland hilly region while relative humidity contributes in the lowland plains. Since vector prevalence is not only linked to meteorological factors, other factors such as water storage practices, waste disposal, sanitary conditions and vector control strategy should also be considered. We recommend strengthening and scaling up dengue vector surveillance and control programmes for monsoon season in both upland and lowland regions in Nepal. Electronic supplementary material The online version of this article (10.1186/s13071-019-3304-3) contains supplementary material, which is available to authorized users.
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Affiliation(s)
- Reshma Tuladhar
- Central Department of Microbiology, Tribhuvan University, Kathmandu, Nepal. .,Amity Institute of Microbial Technology, Amity University, Noida, UP, India.
| | - Anjana Singh
- Central Department of Microbiology, Tribhuvan University, Kathmandu, Nepal
| | - Megha Raj Banjara
- Central Department of Microbiology, Tribhuvan University, Kathmandu, Nepal
| | - Ishan Gautam
- Natural History Museum, Tribhuvan University, Kathmandu, Nepal
| | - Meghnath Dhimal
- Nepal Health Research Council, Ministry of Health and Population, Ramshah Path, Kathmandu, Nepal
| | - Ajit Varma
- Amity Institute of Microbial Technology, Amity University, Noida, UP, India
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169
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Chen L, Zhu H, Wang X. Modeling Spatiotemporal Distribution of Mosquitoes Abundance With Unobservable Environmental Factors. JOURNAL OF MEDICAL ENTOMOLOGY 2019; 56:65-71. [PMID: 30339250 PMCID: PMC6324192 DOI: 10.1093/jme/tjy118] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/12/2017] [Indexed: 05/31/2023]
Abstract
Mosquito trap counts are heavily influenced by environmental factors such as temperature and precipitation. However, some important geographic factors, such as land use and elevation of a particular site, are often either not recorded or simplify not observable. This is a major issue in building a predictive model for the mosquito trap counts over time across a particular region. The collective impact of all unobservable factors for one particular site is estimated by a hidden dimension method. Application to mosquito trap counts in Peel Region has shown that our model can significantly improve the modeling accuracy of the generalized linear model. This method may provide a significantly better characterization of the spatiotemporal distribution of mosquito (Diptera: Culicidae) abundance in areas with green lands or open spaces.
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Affiliation(s)
- Longbin Chen
- LAMPS and Department of Mathematics and Statistics, York University, Toronto, ON, Canada
| | - Huaiping Zhu
- LAMPS and Department of Mathematics and Statistics, York University, Toronto, ON, Canada
| | - Xiaogang Wang
- LAMPS and Department of Mathematics and Statistics, York University, Toronto, ON, Canada
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170
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Caminade C, McIntyre KM, Jones AE. Impact of recent and future climate change on vector-borne diseases. Ann N Y Acad Sci 2019; 1436:157-173. [PMID: 30120891 PMCID: PMC6378404 DOI: 10.1111/nyas.13950] [Citation(s) in RCA: 217] [Impact Index Per Article: 43.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/04/2018] [Revised: 07/12/2018] [Accepted: 07/17/2018] [Indexed: 12/22/2022]
Abstract
Climate change is one of the greatest threats to human health in the 21st century. Climate directly impacts health through climatic extremes, air quality, sea-level rise, and multifaceted influences on food production systems and water resources. Climate also affects infectious diseases, which have played a significant role in human history, impacting the rise and fall of civilizations and facilitating the conquest of new territories. Our review highlights significant regional changes in vector and pathogen distribution reported in temperate, peri-Arctic, Arctic, and tropical highland regions during recent decades, changes that have been anticipated by scientists worldwide. Further future changes are likely if we fail to mitigate and adapt to climate change. Many key factors affect the spread and severity of human diseases, including mobility of people, animals, and goods; control measures in place; availability of effective drugs; quality of public health services; human behavior; and political stability and conflicts. With drug and insecticide resistance on the rise, significant funding and research efforts must to be maintained to continue the battle against existing and emerging diseases, particularly those that are vector borne.
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Affiliation(s)
- Cyril Caminade
- Department of Epidemiology and Population Health, Institute of Infection and Global HealthUniversity of LiverpoolLiverpoolUK
- NIHR Health Protection Research Unit in Emerging and Zoonotic InfectionsLiverpoolUK
| | - K. Marie McIntyre
- Department of Epidemiology and Population Health, Institute of Infection and Global HealthUniversity of LiverpoolLiverpoolUK
- NIHR Health Protection Research Unit in Emerging and Zoonotic InfectionsLiverpoolUK
| | - Anne E. Jones
- Department of Mathematical SciencesUniversity of LiverpoolLiverpoolUK
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Kittayapong P, Kaeothaisong NO, Ninphanomchai S, Limohpasmanee W. Combined sterile insect technique and incompatible insect technique: sex separation and quality of sterile Aedes aegypti male mosquitoes released in a pilot population suppression trial in Thailand. Parasit Vectors 2018; 11:657. [PMID: 30583749 PMCID: PMC6304762 DOI: 10.1186/s13071-018-3214-9] [Citation(s) in RCA: 40] [Impact Index Per Article: 6.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 08/22/2023] Open
Abstract
Background The sterile insect technique (SIT), which is based on irradiation-induced sterility, and incompatible insect technique (IIT), which is based on Wolbachia-induced cytoplasmic incompatibility (a kind of male sterility), have been used as alternative methods to reduce mosquito vector populations. Both methods require the release of males to reduce fertile females and suppress the number of natural populations. Different techniques of sex separation to obtain only males have been investigated previously. Our work involves an application of mechanical larval-pupal glass separators to separate Wolbachia-infected Aedes aegypti males from females at the pupal stage, prior to irradiation, and for use in a pilot field release and to assess the quality of males and females before and after sex separation and sterilization. Results This study was the first to demonstrate the efficiency of mechanical glass separators in separating males for use in an Ae. aegypti suppression trial by a combined SIT/IIT approach. Our results indicated that male and female pupae of Wolbachia-infected Ae. aegypti mosquitoes were significantly different (p < 0.05) in weight, size, and emergence-time, which made it easier for sex separation by this mechanical method. During the pilot field release, the percentage of female contamination was detected to be quite low and significantly different between the first (0.10 ± 0.13) and the second (0.02 ± 0.02) twelve-week period. Both males and females were almost completely sterile after exposure to 70 Gy irradiation dose. We observed that both irradiated Wolbachia-infected males and females survived and lived longer than two weeks, but males could live longer than females (p < 0.05) when they were irradiated at the same irradiation dose. When comparing irradiated mosquitoes with non-irradiated ones, there was no significant difference in longevity and survival-rate between those males, but non-irradiated females lived longer than irradiated ones (p < 0.05). Conclusion Mechanical sex separation by using a larval-pupal glass separator was practically applied to obtain only males for further sterilization and open field release in a pilot population suppression trial of Ae. aegypti in Thailand. Female contamination was detected to be quite low, and skilled personnel can reduce the risk for female release. The irradiated Wolbachia-infected females accidentally released were found to be completely sterile, with shorter life span than males.
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Affiliation(s)
- Patttamaporn Kittayapong
- Center of Excellence for Vectors and Vector-Borne Diseases, Faculty of Science, Mahidol University at Salaya, Nakhon Pathom, 73170, Thailand. .,Department of Biology, Faculty of Science, Mahidol University, Bangkok, 10400, Thailand.
| | - Nuanla-Ong Kaeothaisong
- Center of Excellence for Vectors and Vector-Borne Diseases, Faculty of Science, Mahidol University at Salaya, Nakhon Pathom, 73170, Thailand
| | - Suwannapa Ninphanomchai
- Center of Excellence for Vectors and Vector-Borne Diseases, Faculty of Science, Mahidol University at Salaya, Nakhon Pathom, 73170, Thailand
| | - Wanitch Limohpasmanee
- Thailand Institute of Nuclear Technology, Ministry of Science and Technology, Nakhon Nayok, 26120, Thailand
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172
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Tennant W, Recker M. Robustness of the reproductive number estimates in vector-borne disease systems. PLoS Negl Trop Dis 2018; 12:e0006999. [PMID: 30557351 PMCID: PMC6312349 DOI: 10.1371/journal.pntd.0006999] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/06/2018] [Revised: 12/31/2018] [Accepted: 11/14/2018] [Indexed: 01/30/2023] Open
Abstract
BACKGROUND The required efforts, feasibility and predicted success of an intervention strategy against an infectious disease are partially determined by its basic reproduction number, R0. In its simplest form R0 can be understood as the product of the infectious period, the number of infectious contacts and the per-contact transmission probability, which in the case of vector-transmitted diseases necessarily extend to the vector stages. As vectors do not usually recover from infection, they remain infectious for life, which places high significance on the vector's life expectancy. Current methods for estimating the R0 for a vector-borne disease are mostly derived from compartmental modelling frameworks assuming constant vector mortality rates. We hypothesised that some of the assumptions underlying these models can lead to unrealistic high vector life expectancies with important repercussions for R0 estimates. METHODOLOGY AND PRINCIPAL FINDINGS Here we used a stochastic, individual-based model which allowed us to directly measure the number of secondary infections arising from one index case under different assumptions about vector mortality. Our results confirm that formulas based on age-independent mortality rates can overestimate R0 by nearly 100% compared to our own estimate derived from first principles. We further provide a correction factor that can be used with a standard R0 formula and adjusts for the discrepancies due to erroneous vector age distributions. CONCLUSION Vector mortality rates play a crucial role for the success and general epidemiology of vector-transmitted diseases. Many modelling efforts intrinsically assume these to be age-independent, which, as clearly demonstrated here, can lead to severe over-estimation of the disease's reproduction number. Our results thus re-emphasise the importance of obtaining field-relevant and species-dependent vector mortality rates, which in turn would facilitate more realistic intervention impact predictions.
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Affiliation(s)
- Warren Tennant
- Centre for Mathematics and the Environment, University of Exeter, Penryn Campus, Penryn, United Kingdom
| | - Mario Recker
- Centre for Mathematics and the Environment, University of Exeter, Penryn Campus, Penryn, United Kingdom
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173
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Benedum CM, Seidahmed OME, Eltahir EAB, Markuzon N. Statistical modeling of the effect of rainfall flushing on dengue transmission in Singapore. PLoS Negl Trop Dis 2018; 12:e0006935. [PMID: 30521523 PMCID: PMC6283346 DOI: 10.1371/journal.pntd.0006935] [Citation(s) in RCA: 55] [Impact Index Per Article: 9.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/11/2018] [Accepted: 10/19/2018] [Indexed: 12/13/2022] Open
Abstract
BACKGROUND Rainfall patterns are one of the main drivers of dengue transmission as mosquitoes require standing water to reproduce. However, excess rainfall can be disruptive to the Aedes reproductive cycle by "flushing out" aquatic stages from breeding sites. We developed models to predict the occurrence of such "flushing" events from rainfall data and to evaluate the effect of flushing on dengue outbreak risk in Singapore between 2000 and 2016. METHODS We used machine learning and regression models to predict days with "flushing" in the dataset based on entomological and corresponding rainfall observations collected in Singapore. We used a distributed lag nonlinear logistic regression model to estimate the association between the number of flushing events per week and the risk of a dengue outbreak. RESULTS Days with flushing were identified through the developed logistic regression model based on entomological data (test set accuracy = 92%). Predictions were based upon the aggregate number of thresholds indicating unusually rainy conditions over multiple weeks. We observed a statistically significant reduction in dengue outbreak risk one to six weeks after flushing events occurred. For weeks with five or more flushing events, compared with weeks with no flushing events, the risk of a dengue outbreak in the subsequent weeks was reduced by 16% to 70%. CONCLUSIONS We have developed a high accuracy predictive model associating temporal rainfall patterns with flushing conditions. Using predicted flushing events, we have demonstrated a statistically significant reduction in dengue outbreak risk following flushing, with the time lag well aligned with time of mosquito development from larvae and infection transmission. Vector control programs should consider the effects of hydrological conditions in endemic areas on dengue transmission.
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Affiliation(s)
- Corey M. Benedum
- Draper, Cambridge, Massachusetts, United States of America
- Department of Epidemiology, Boston University School of Public Health, Boston, Massachusetts, United States of America
| | - Osama M. E. Seidahmed
- Ralph M Parsons Laboratory, Massachusetts Institute of Technology, Cambridge, Massachusetts, United States of America
| | - Elfatih A. B. Eltahir
- Ralph M Parsons Laboratory, Massachusetts Institute of Technology, Cambridge, Massachusetts, United States of America
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174
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Culbert NJ, Maiga H, Somda NSB, Gilles JRL, Bouyer J, Mamai W. Longevity of mass-reared, irradiated and packed male Anopheles arabiensis and Aedes aegypti under simulated environmental field conditions. Parasit Vectors 2018; 11:603. [PMID: 30463624 PMCID: PMC6249817 DOI: 10.1186/s13071-018-3191-z] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/14/2018] [Accepted: 11/08/2018] [Indexed: 11/25/2022] Open
Abstract
Background To ensure the success of a mosquito control programme that integrates the sterile insect technique (SIT), it is highly desirable to release sterile males with a maximal lifespan to increase release effectiveness. Understanding sterile male survival under field conditions is thus critical for determining the number of males to be released. Our study aimed to investigate the effect of mass rearing, irradiation, chilling, packing and release time on irradiated male mosquito longevity. Methods Anopheles arabiensis and Aedes aegypti immature stages were mass-reared using a rack and tray system. Batches of 50 males irradiated at the pupal stage were immobilised, packed into canisters and chilled for 6 hours at 6 °C. Mosquitoes were then transferred either in the early morning or early evening into climate chambers set to simulate the weather conditions, typical of the beginning of the rainy season in Khartoum, Sudan and Juazeiro, Brazil for An. arabiensis and Ae. aegypti, respectively. The longevity of experimental males was assessed and compared to mass-reared control males subjected either to simulated field or laboratory conditions. Results The combined irradiation, chilling and packing treatments significantly reduced the longevity of both An. arabiensis and Ae. aegypti under simulated field conditions (P < 0.001). However, packing alone did not significantly reduce longevity of Ae. aegypti (P = 0.38) but did in An. arabiensis (P < 0.001). Overall, the longevity of mass reared, irradiated and packed males was significantly reduced, with the median survival time (days) lower following an early morning introduction (4.62 ± 0.20) compared to an evening (7.34 ± 0.35) in An. arabiensis (P < 0.001). However, there was no significant difference in longevity between morning (9.07 ± 0.54) and evening (7.76 ± 0.50) in Ae. aegypti (P = 0.14). Conclusions Our study showed that sterile mass-reared males have a reduced lifespan in comparison to laboratory-maintained controls under simulated field conditions, and that An. arabiensis appeared to be more sensitive to the handling process and release time than Ae. aegypti. Longevity and release time are important parameters to be considered for a successful area-wide integrated vector control programme with a SIT component.
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Affiliation(s)
- Nicole Jean Culbert
- Insect Pest Control Laboratory, Joint FAO/IAEA Division of Nuclear Techniques in Food and Agriculture, Vienna, Austria. .,Institute of Integrative Biology & the Centre for Genomic Research, University of Liverpool, Liverpool, Merseyside, UK.
| | - Hamidou Maiga
- Insect Pest Control Laboratory, Joint FAO/IAEA Division of Nuclear Techniques in Food and Agriculture, Vienna, Austria.,Institut de Recherche en Sciences de la Santé/Direction Régionale de l'Ouest (IRSS/DRO), Bobo-Dioulasso, Burkina Faso
| | - Nanwintoum Sévérin Bimbile Somda
- Insect Pest Control Laboratory, Joint FAO/IAEA Division of Nuclear Techniques in Food and Agriculture, Vienna, Austria.,Institut de Recherche en Sciences de la Santé/Direction Régionale de l'Ouest (IRSS/DRO), Bobo-Dioulasso, Burkina Faso
| | - Jeremie Roger Lionel Gilles
- Insect Pest Control Laboratory, Joint FAO/IAEA Division of Nuclear Techniques in Food and Agriculture, Vienna, Austria
| | - Jérémy Bouyer
- Insect Pest Control Laboratory, Joint FAO/IAEA Division of Nuclear Techniques in Food and Agriculture, Vienna, Austria
| | - Wadaka Mamai
- Insect Pest Control Laboratory, Joint FAO/IAEA Division of Nuclear Techniques in Food and Agriculture, Vienna, Austria. .,Institut de Recherche Agricole pour le Développement (IRAD), Yaoundé, Cameroon.
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175
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Expected Changes of Montenegrin Climate, Impact on the Establishment and Spread of the Asian Tiger Mosquito (Aedes albopictus), and Validation of the Model and Model-Based Field Sampling. ATMOSPHERE 2018. [DOI: 10.3390/atmos9110453] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/17/2023]
Abstract
Aedes albopictus has become established in many parts of Europe since its introduction at the end of the 20th century. It can vector a range of arboviruses, of which Chikungunya and Dengue are most significant for Europe. An analysis of the expected climate change and the related shift in Köppen zones for Montenegro and impact on the establishment of Ae. albopictus was conducted. Outputs of a mechanistic Aedes albopictus model were validated by 2245 presence/absence records collected from 237 different sites between 2001 and 2014. Finally, model-based sampling was designed and performed at 48 sites in 2015, in a previously unexplored northern part of Montenegro, and results were validated. The Eta Belgrade University (EBU)-Princeton Ocean Model (POM) regional climate model was used with the A2 emissions scenario for the 2001–2030 and 2071–2100 integration periods. The results point to a significant increase in suitability for the mosquito and a vertical shift to higher altitudes by the end of the century. The model showed excellent results with the area under the receiver operating characteristic curve (AUC) of 0.94. This study provides a tool for prioritizing surveillance efforts (model-based surveillance), especially when resources are limited. This is the first published analysis of Climate Change that incorporates observations from the national synoptic grid and the subsequent impact on Ae. albopictus in Montenegro.
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176
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Acharya BK, Cao C, Lakes T, Chen W, Naeem S, Pandit S. Modeling the spatially varying risk factors of dengue fever in Jhapa district, Nepal, using the semi-parametric geographically weighted regression model. INTERNATIONAL JOURNAL OF BIOMETEOROLOGY 2018; 62:1973-1986. [PMID: 30182200 DOI: 10.1007/s00484-018-1601-8] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/23/2017] [Revised: 07/31/2018] [Accepted: 08/13/2018] [Indexed: 05/26/2023]
Abstract
Dengue fever is expanding rapidly in many tropical and subtropical countries since the last few decades. However, due to limited research, little is known about the spatial patterns and associated risk factors on a local scale particularly in the newly emerged areas. In this study, we explored spatial patterns and evaluated associated potential environmental and socioeconomic risk factors in the distribution of dengue fever incidence in Jhapa district, Nepal. Global and local Moran's I were used to assess global and local clustering patterns of the disease. The ordinary least square (OLS), geographically weighted regression (GWR), and semi-parametric geographically weighted regression (s-GWR) models were compared to describe spatial relationship of potential environmental and socioeconomic risk factors with dengue incidence. Our result revealed heterogeneous and highly clustered distribution of dengue incidence in Jhapa district during the study period. The s-GWR model best explained the spatial association of potential risk factors with dengue incidence and was used to produce the predictive map. The statistical relationship between dengue incidence and proportion of urban area, proximity to road, and population density varied significantly among the wards while the associations of land surface temperature (LST) and normalized difference vegetation index (NDVI) remained constant spatially showing importance of mixed geographical modeling approach (s-GWR) in the spatial distribution of dengue fever. This finding could be used in the formulation and execution of evidence-based dengue control and management program to allocate scare resources locally.
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Affiliation(s)
- Bipin Kumar Acharya
- Institute of Remote Sensing and Digital Earth, Chinese Academy of Sciences, No.9 Dengzhuang South Road, Haidian District, Beijing, 100094, China
- University of Chinese Academy of Sciences, No.19A Yuquan Road, Beijing, 100049, China
| | - ChunXiang Cao
- Institute of Remote Sensing and Digital Earth, Chinese Academy of Sciences, No.9 Dengzhuang South Road, Haidian District, Beijing, 100094, China.
| | - Tobia Lakes
- Department of Geography, Humboldt-Universität zu Berlin, Unter den Linden 6, 10099, Berlin, Germany
| | - Wei Chen
- Institute of Remote Sensing and Digital Earth, Chinese Academy of Sciences, No.9 Dengzhuang South Road, Haidian District, Beijing, 100094, China
| | - Shahid Naeem
- Institute of Remote Sensing and Digital Earth, Chinese Academy of Sciences, No.9 Dengzhuang South Road, Haidian District, Beijing, 100094, China
- University of Chinese Academy of Sciences, No.19A Yuquan Road, Beijing, 100049, China
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177
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Sherpa S, Rioux D, Goindin D, Fouque F, François O, Després L. At the Origin of a Worldwide Invasion: Unraveling the Genetic Makeup of the Caribbean Bridgehead Populations of the Dengue Vector Aedes aegypti. Genome Biol Evol 2018; 10:56-71. [PMID: 29267872 PMCID: PMC5758905 DOI: 10.1093/gbe/evx267] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 12/15/2017] [Indexed: 12/21/2022] Open
Abstract
Human-driven global environmental changes have considerably increased the risk of biological invasions, especially the spread of human parasites and their vectors. Among exotic species that have major impacts on public health, the dengue fever mosquito Aedes aegypti originating from Africa has spread worldwide during the last three centuries. Although considerable progress has been recently made in understanding the history of this invasion, the respective roles of human and abiotic factors in shaping patterns of genetic diversity remain largely unexplored. Using a genome-wide sample of genetic variants (3,530 ddRAD SNPs), we analyzed the genetic structure of Ae. aegypti populations in the Caribbean, the first introduced territories in the Americas. Fourteen populations were sampled in Guyane and in four islands of the Antilles that differ in climatic conditions, intensity of urbanization, and vector control history. The genetic diversity in the Caribbean was low (He = 0.14–0.17), as compared with a single African collection from Benin (He = 0.26) and site-frequency spectrum analysis detected an ancient bottleneck dating back ∼300 years ago, supporting a founder event during the introduction of Ae. aegypti. Evidence for a more recent bottleneck may be related to the eradication program undertaken on the American continent in the 1950s. Among 12 loci detected as FST-outliers, two were located in candidate genes for insecticide resistance (cytochrome P450 and voltage-gated sodium channel). Genome–environment association tests identified additional loci associated with human density and/or deltamethrin resistance. Our results highlight the high impact of human pressures on the demographic history and genetic variation of Ae. aegypti Caribbean populations.
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Affiliation(s)
- Stéphanie Sherpa
- Laboratoire d'Ecologie Alpine, CNRS UMR 5553, Université Grenoble Alpes, Grenoble, France
| | - Delphine Rioux
- Laboratoire d'Ecologie Alpine, CNRS UMR 5553, Université Grenoble Alpes, Grenoble, France
| | - Daniella Goindin
- Laboratoire d'Entomologie Médicale, Institut Pasteur de Guadeloupe, Les Abymes, France
| | - Florence Fouque
- Special Programme for Research and Training in Tropical Diseases, World Health Organization, Geneva, Switzerland
| | - Olivier François
- Laboratoire Techniques de l'Ingénierie Médicale et de la Complexité, CNRS UMR 5525, Université Grenoble Alpes, Grenoble, France
| | - Laurence Després
- Laboratoire d'Ecologie Alpine, CNRS UMR 5553, Université Grenoble Alpes, Grenoble, France
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178
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O'Reilly KM, Lowe R, Edmunds WJ, Mayaud P, Kucharski A, Eggo RM, Funk S, Bhatia D, Khan K, Kraemer MUG, Wilder-Smith A, Rodrigues LC, Brasil P, Massad E, Jaenisch T, Cauchemez S, Brady OJ, Yakob L. Projecting the end of the Zika virus epidemic in Latin America: a modelling analysis. BMC Med 2018; 16:180. [PMID: 30285863 PMCID: PMC6169075 DOI: 10.1186/s12916-018-1158-8] [Citation(s) in RCA: 39] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 05/18/2018] [Accepted: 08/21/2018] [Indexed: 12/21/2022] Open
Abstract
BACKGROUND Zika virus (ZIKV) emerged in Latin America and the Caribbean (LAC) region in 2013, with serious implications for population health in the region. In 2016, the World Health Organization declared the ZIKV outbreak a Public Health Emergency of International Concern following a cluster of associated neurological disorders and neonatal malformations. In 2017, Zika cases declined, but future incidence in LAC remains uncertain due to gaps in our understanding, considerable variation in surveillance and the lack of a comprehensive collation of data from affected countries. METHODS Our analysis combines information on confirmed and suspected Zika cases across LAC countries and a spatio-temporal dynamic transmission model for ZIKV infection to determine key transmission parameters and projected incidence in 90 major cities within 35 countries. Seasonality was determined by spatio-temporal estimates of Aedes aegypti vectorial capacity. We used country and state-level data from 2015 to mid-2017 to infer key model parameters, country-specific disease reporting rates, and the 2018 projected incidence. A 10-fold cross-validation approach was used to validate parameter estimates to out-of-sample epidemic trajectories. RESULTS There was limited transmission in 2015, but in 2016 and 2017 there was sufficient opportunity for wide-spread ZIKV transmission in most cities, resulting in the depletion of susceptible individuals. We predict that the highest number of cases in 2018 would present within some Brazilian States (Sao Paulo and Rio de Janeiro), Colombia and French Guiana, but the estimated number of cases were no more than a few hundred. Model estimates of the timing of the peak in incidence were correlated (p < 0.05) with the reported peak in incidence. The reporting rate varied across countries, with lower reporting rates for those with only confirmed cases compared to those who reported both confirmed and suspected cases. CONCLUSIONS The findings suggest that the ZIKV epidemic is by and large over within LAC, with incidence projected to be low in most cities in 2018. Local low levels of transmission are probable, but the estimated rate of infection suggests that most cities have a population with high levels of herd immunity.
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Affiliation(s)
- Kathleen M O'Reilly
- Department of Disease Control, London School of Hygiene & Tropical Medicine, London, UK. .,Centre for Mathematical Modelling of Infectious Diseases, London School of Hygiene & Tropical Medicine, London, UK.
| | - Rachel Lowe
- Centre for Mathematical Modelling of Infectious Diseases, London School of Hygiene & Tropical Medicine, London, UK.,Department of Infectious Disease Epidemiology, London School of Hygiene & Tropical Medicine, London, UK.,Barcelona Institute for Global Health (ISGLOBAL), Barcelona, Spain
| | - W John Edmunds
- Centre for Mathematical Modelling of Infectious Diseases, London School of Hygiene & Tropical Medicine, London, UK.,Department of Infectious Disease Epidemiology, London School of Hygiene & Tropical Medicine, London, UK
| | - Philippe Mayaud
- Department of Clinical Research, London School of Hygiene & Tropical Medicine, London, UK
| | - Adam Kucharski
- Centre for Mathematical Modelling of Infectious Diseases, London School of Hygiene & Tropical Medicine, London, UK.,Department of Infectious Disease Epidemiology, London School of Hygiene & Tropical Medicine, London, UK
| | - Rosalind M Eggo
- Centre for Mathematical Modelling of Infectious Diseases, London School of Hygiene & Tropical Medicine, London, UK.,Department of Infectious Disease Epidemiology, London School of Hygiene & Tropical Medicine, London, UK
| | - Sebastian Funk
- Centre for Mathematical Modelling of Infectious Diseases, London School of Hygiene & Tropical Medicine, London, UK.,Department of Infectious Disease Epidemiology, London School of Hygiene & Tropical Medicine, London, UK
| | - Deepit Bhatia
- Division of Infectious Diseases, University of Toronto, Toronto, ON, Canada.,Centre for Research on Inner City Health, Li Ka Shing Knowledge Institute, St Michael's Hospital, Toronto, Toronto, ON, Canada
| | - Kamran Khan
- Division of Infectious Diseases, University of Toronto, Toronto, ON, Canada.,Centre for Research on Inner City Health, Li Ka Shing Knowledge Institute, St Michael's Hospital, Toronto, Toronto, ON, Canada
| | - Moritz U G Kraemer
- Harvard Medical School, Harvard University, Boston, MA, USA.,Boston Children's Hospital, Boston, MA, USA.,Department of Zoology, University of Oxford, Oxford, UK
| | - Annelies Wilder-Smith
- Department of Disease Control, London School of Hygiene & Tropical Medicine, London, UK.,Department of Medicine and Public Health, Umea University, Umea, Sweden.,Institute of Public Health, University of Heidelberg, Heidelberg, Germany
| | - Laura C Rodrigues
- Department of Infectious Disease Epidemiology, London School of Hygiene & Tropical Medicine, London, UK
| | - Patricia Brasil
- Instituto Nacional de Infectologia Evandro Chagas/Fiocruz, Rio de Janeiro, Brazil
| | - Eduardo Massad
- School of Applied Mathematics, Fundacao Getulio Vargas, Rio de Janeiro, Brazil
| | - Thomas Jaenisch
- Department for Infectious Diseases and Parasitology, Department for Infectious Diseases, University of Heidelberg, Heidelberg, Germany
| | - Simon Cauchemez
- Mathematical Modelling of Infectious Diseases Unit, Institut Pasteur, Paris, France.,Centre National de la Recherche Scientifique, URA3012, Paris, France.,Center of Bioinformatics, Biostatistics and Integrative Biology, Institut Pasteur, Paris, France
| | - Oliver J Brady
- Centre for Mathematical Modelling of Infectious Diseases, London School of Hygiene & Tropical Medicine, London, UK.,Department of Infectious Disease Epidemiology, London School of Hygiene & Tropical Medicine, London, UK
| | - Laith Yakob
- Department of Disease Control, London School of Hygiene & Tropical Medicine, London, UK.,Centre for Mathematical Modelling of Infectious Diseases, London School of Hygiene & Tropical Medicine, London, UK
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179
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Perez-Guzman PN, Carlos Junior Alcantara L, Obolski U, de Lima MM, Ashley EA, Smithuis F, Horby P, Maude RJ, Lin Z, Kyaw AMM, Lourenço J. Measuring Mosquito-borne Viral Suitability in Myanmar and Implications for Local Zika Virus Transmission. PLOS CURRENTS 2018; 10:ecurrents.outbreaks.7a6c64436a3085ebba37e5329ba169e6. [PMID: 31032144 PMCID: PMC6472868 DOI: 10.1371/currents.outbreaks.7a6c64436a3085ebba37e5329ba169e6] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
Abstract
INTRODUCTION In South East Asia, mosquito-borne viruses (MBVs) have long been a cause of high disease burden and significant economic costs. While in some SEA countries the epidemiology of MBVs is spatio-temporally well characterised and understood, in others such as Myanmar our understanding is largely incomplete. MATERIALS AND METHODS Here, we use a simple mathematical approach to estimate a climate-driven suitability index aiming to better characterise the intrinsic, spatio-temporal potential of MBVs in Myanmar. RESULTS Results show that the timing and amplitude of the natural oscillations of our suitability index are highly informative for the temporal patterns of DENV case counts at the country level, and a mosquito-abundance measure at a city level. When projected at fine spatial scales, the suitability index suggests that the time period of highest MBV transmission potential is between June and October independently of geographical location. Higher potential is nonetheless found along the middle axis of the country and in particular in the southern corridor of international borders with Thailand. DISCUSSION This research complements and expands our current understanding of MBV transmission potential in Myanmar, by identifying key spatial heterogeneities and temporal windows of importance for surveillance and control. We discuss our findings in the context of Zika virus given its recent worldwide emergence, public health impact, and current lack of information on its epidemiology and transmission potential in Myanmar. The proposed suitability index here demonstrated is applicable to other regions of the world for which surveillance data is missing, either due to lack of resources or absence of an MBV of interest.
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Affiliation(s)
- Pablo Noel Perez-Guzman
- Department of Global Health and Tropical Medicine, University of Oxford, UK; Department of Infectious Disease Epidemiology, Imperial College, London, UK
| | | | - Uri Obolski
- Department of Zoology, University of Oxford, UK
| | - Maricelia M de Lima
- Laboratory of Haematology, Genetics and Computational Biology, FIOCRUZ, Brazil
| | - Elizabeth A Ashley
- Myanmar-Oxford Clinical Research Unit, Yangon; Centre for Tropical Medicine and Global Health, Nuffield Department of Medicine, University of Oxford, UK
| | - Frank Smithuis
- Myanmar-Oxford Clinical Research Unit, Yangon; Nuffield Department of Medicine, University of Oxford, UK; Centre for Tropical Medicine and Global Health, Nuffield Department of Medicine, University of Oxford, UK
| | - Peter Horby
- Nuffield Department of Medicine, University of Oxford, UK
| | - Richard J Maude
- Nuffield Department of Medicine, University of Oxford, UK; Centre for Tropical Medicine and Global Health, Nuffield Department of Medicine, University of Oxford, UK; Mahidol-Oxford Tropical Medicine Research Unit, Faculty of Tropical Medicine, Mahidol University,Thailand; Harvard TH Chan School of Public Health, Harvard University, Boston, USA
| | - Zaw Lin
- Myanmar Ministry of Health and Sports, Naypyidaw, Myanmar
| | | | - José Lourenço
- Department of Zoology, University of Oxford, Oxford, UK
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180
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Dickens BL, Sun H, Jit M, Cook AR, Carrasco LR. Determining environmental and anthropogenic factors which explain the global distribution of Aedes aegypti and Ae. albopictus. BMJ Glob Health 2018; 3:e000801. [PMID: 30233829 PMCID: PMC6135425 DOI: 10.1136/bmjgh-2018-000801] [Citation(s) in RCA: 51] [Impact Index Per Article: 8.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/27/2018] [Revised: 05/23/2018] [Accepted: 07/13/2018] [Indexed: 12/22/2022] Open
Abstract
Background Responsible for considerable global human morbidity and mortality, Aedes aegypti and Ae. albopictus are the primary vectors of several important human diseases, including dengue and yellow fever. Although numerous variables that affect mosquito survival and reproduction have been recorded at the local and regional scales, many remain untested at the global level, potentially confounding mapping efforts to date. Methods We develop a modelling ensemble of boosted regression trees and maximum entropy models using sets of variables previously untested at the global level to examine their performance in predicting the global distribution of these two vectors. The results show that accessibility, absolute humidity and annual minimum temperature are consistently the strongest predictors of mosquito presence. Both vectors are similar in their response to accessibility and humidity, but exhibit individual profiles for temperature. Their mapped ranges are therefore similar except at peripheral latitudes, where the range of Ae. albopictus extends further, a finding consistent with ongoing trapping studies. We show that variables previously identified as being relevant, including maximum and mean temperatures, enhanced vegetation index, relative humidity and population density, are comparatively weak performers. Results The variables identified represent three key biological mechanisms. Cold tolerance is a critical biological parameter, controlling both species' distribution northwards, and to a lesser degree for Ae. albopictus which has consequent greater inland suitability in North America, Europe and East Asia. Absolute humidity restricts the distribution of both vectors from drier areas, where moisture availability is very low, and increases their suitability in coastal areas. The latter is exacerbated by accessibility with increased likelihood of vector importation due to greater potential for human and trade movement. Conclusion Accessibility, absolute humidity and annual minimum temperatures were the strongest and most robust global predictors of Ae. aegypti and Ae. albopictus presence, which should be considered in control efforts and future distribution projections.
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Affiliation(s)
- Borame Lee Dickens
- Saw Swee Hock School of Public Health, National University of Singapore and National University Health System, Singapore
| | - Haoyang Sun
- Saw Swee Hock School of Public Health, National University of Singapore and National University Health System, Singapore
| | - Mark Jit
- Department of Infectious Disease Epidemiology, London School of Hygiene and Tropical Medicine, London, UK.,Modelling and Economics Unit, Public Health England, London, UK
| | - Alex R Cook
- Saw Swee Hock School of Public Health, National University of Singapore and National University Health System, Singapore
| | - Luis Roman Carrasco
- Department of Biological Sciences, National University of Singapore, Singapore
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181
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Reiskind MH, Janairo MS. Tracking Aedes aegypti (Diptera: Culicidae) Larval Behavior Across Development: Effects of Temperature and Nutrients on Individuals' Foraging Behavior. JOURNAL OF MEDICAL ENTOMOLOGY 2018; 55:1086-1092. [PMID: 29771372 DOI: 10.1093/jme/tjy073] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/12/2018] [Indexed: 06/08/2023]
Abstract
Immature mosquitoes alter their foraging behavior in response to variation in nutrients, predators, and temperature, with consequences on the adult stage where pathogens are transmitted. These patterns of behavior have not been described with respect to both developmental stage and environmental variation, nor has behavior been examined within an individual across instars. We hypothesized that individual larvae have distinct behavioral syndromes, and predict that the rank of foraging activity in the third instar will be correlated with foraging activity in the fourth instar for an individual across all conditions. We also hypothesized that individuals that fail to achieve adulthood forage more intensely than those that will emerge due to the need for greater resources. To examine these hypotheses, we conducted an experiment in which we exposed 96 individual Aedes aegypti L. (Diptera: Culicidae) larvae to four combinations of temperature and nutrients. We recorded larvae in the third and fourth instar, and generated time budgets of active and passive foraging behaviors. We found correlations between individual behavior in the third and fourth instar when conditions were the most stressful (cool temperatures and low nutrients). Controlling for this intra-individual behavior, there was variation between instar behaviors, but this was dependent on both temperature and nutrients. We also found that larvae that failed to pupate within 28 d before emergence foraged more intensely than those that emerged. While we found no evidence that mosquitoes have distinct behavioral syndromes in Ae. aegypti, we did find support that nutrients and temperature affect behavior differently at different instars.
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Affiliation(s)
- Michael H Reiskind
- Department of Entomology and Plant Pathology, North Carolina State University, Raleigh, NC
| | - M Shawn Janairo
- Department of Entomology and Plant Pathology, North Carolina State University, Raleigh, NC
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182
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Kaul RB, Evans MV, Murdock CC, Drake JM. Spatio-temporal spillover risk of yellow fever in Brazil. Parasit Vectors 2018; 11:488. [PMID: 30157908 PMCID: PMC6116573 DOI: 10.1186/s13071-018-3063-6] [Citation(s) in RCA: 24] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/24/2018] [Accepted: 08/15/2018] [Indexed: 01/03/2023] Open
Abstract
BACKGROUND Yellow fever virus is a mosquito-borne flavivirus that persists in an enzoonotic cycle in non-human primates (NHPs) in Brazil, causing disease in humans through spillover events. Yellow fever (YF) re-emerged in the early 2000s, spreading from the Amazon River basin towards the previously considered low-risk, southeastern region of the country. Previous methods mapping YF spillover risk do not incorporate the temporal dynamics and ecological context of the disease, and are therefore unable to predict seasonality in spatial risk across Brazil. We present the results of a bagged logistic regression predicting the propensity for YF spillover per municipality (administrative sub-district) in Brazil from environmental and demographic covariates aggregated by month. Ecological context was incorporated by creating National and Regional models of spillover dynamics, where the Regional model consisted of two separate models determined by the regions' NHP reservoir species richness (high vs low). RESULTS Of the 5560 municipalities, 82 reported YF cases from 2001 to 2013. Model accuracy was high for the National and low reservoir richness (LRR) models (AUC = 0.80), while the high reservoir richness (HRR) model accuracy was lower (AUC = 0.63). The National model predicted consistently high spillover risk in the Amazon, while the Regional model predicted strong seasonality in spillover risk. Within the Regional model, seasonality of spillover risk in the HRR region was asynchronous to the LRR region. However, the observed seasonality of spillover risk in the LRR Regional model mirrored the national model predictions. CONCLUSIONS The predicted risk of YF spillover varies with space and time. Seasonal trends differ between regions indicating, at times, spillover risk can be higher in the urban coastal regions than the Amazon River basin which is counterintuitive based on current YF risk maps. Understanding the spatio-temporal patterns of YF spillover risk could better inform allocation of public health services.
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Affiliation(s)
- RajReni B Kaul
- Center for the Ecology of Infectious Diseases, University of Georgia, Athens, GA, USA. .,Odum School of Ecology, University of Georgia, Athens, GA, USA.
| | - Michelle V Evans
- Center for the Ecology of Infectious Diseases, University of Georgia, Athens, GA, USA.,Odum School of Ecology, University of Georgia, Athens, GA, USA
| | - Courtney C Murdock
- Center for the Ecology of Infectious Diseases, University of Georgia, Athens, GA, USA.,Odum School of Ecology, University of Georgia, Athens, GA, USA.,Department of Infectious Diseases, University of Georgia, Athens, GA, USA.,Center for Tropical and Global Emerging Diseases, University of Georgia, Athens, GA, USA.,Center for Vaccines and Immunology, University of Georgia, Athens, GA, USA.,River Basin Center, University of Georgia, Athens, GA, USA
| | - John M Drake
- Center for the Ecology of Infectious Diseases, University of Georgia, Athens, GA, USA.,Odum School of Ecology, University of Georgia, Athens, GA, USA
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183
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Misslin R, Vaguet Y, Vaguet A, Daudé É. Estimating air temperature using MODIS surface temperature images for assessing Aedes aegypti thermal niche in Bangkok, Thailand. ENVIRONMENTAL MONITORING AND ASSESSMENT 2018; 190:537. [PMID: 30132225 DOI: 10.1007/s10661-018-6875-0] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/23/2017] [Accepted: 07/25/2018] [Indexed: 06/08/2023]
Abstract
Dengue, the most widespread urban vector-borne disease, is transmitted to human by the mosquito Aedes aegypti. Its distribution in urban areas is heterogeneous over time and space. In time, it is linked to seasonal variations such as warm and cold seasons, as well as rainy and dry seasons. In space, it is linked to social and environmental conditions, which alternate between rich and deprived neighborhoods, vegetated and densely built areas. These variations in terms of land cover can affect surface and air temperature. As a result of its influence on the mosquito's life cycle, temperature plays a crucial part in dengue epidemics potential. Thus, deciphering the thermal variations effects within cities could lead to the identification of precise thermal comfort zones, favorable to the survival of mosquito populations during inter-epidemic periods. The maps that could be produced as a result would enable health authorities to target specific areas. Most cities are equipped with meteorological stations. However, the network is generally not dense enough to precisely identify thermal comfort zones. Remote sensing can be used as a tool to solve this issue. The methodological objective of this paper is to assess the potential of the TVX (Temperature-Vegetation indeX) approach applied to MODIS thermal images for the purpose of estimating daily minimum and maximum air temperatures in the city of Bangkok, Thailand. The TVX approach has been seldom used over urban areas due to the heterogeneous nature of cities in terms of land cover. However, our study shows that in vegetated cities such as Bangkok, the TVX method provides valuable results which can be used to assess thermal niche of A. aegypti.
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Affiliation(s)
- Renaud Misslin
- CNRS UMR IDEES 6266, Université de Rouen, Rouen, France.
- INRA, LAE, Université de Lorraine, Colmar, France.
| | - Yvette Vaguet
- CNRS UMR IDEES 6266, Université de Rouen, Rouen, France
| | - Alain Vaguet
- CNRS UMR IDEES 6266, Université de Rouen, Rouen, France
| | - Éric Daudé
- CNRS UMR IDEES 6266, Université de Rouen, Rouen, France
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184
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Sánchez-González G, Condé R, Noguez Moreno R, López Vázquez PC. Prediction of dengue outbreaks in Mexico based on entomological, meteorological and demographic data. PLoS One 2018; 13:e0196047. [PMID: 30080868 PMCID: PMC6078291 DOI: 10.1371/journal.pone.0196047] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/16/2017] [Accepted: 04/04/2018] [Indexed: 11/25/2022] Open
Abstract
Dengue virus has shown a complex pattern of transmission across Latin America over the last two decades. In an attempt to explain the permanence of the disease in regions subjected to drought seasons lasting over six months, various hypotheses have been proposed. These include transovarial transmission, forest reservoirs and asymptomatic human virus carriers. Dengue virus is endemic in Mexico, a country in which half of the population is seropositive. Seropositivity is a risk factor for Dengue Hemorrhagic Fever upon a second encounter with the dengue virus. Since Dengue Hemorrhagic Fever can cause death, it is important to develop epidemiological mathematical tools that enable policy makers to predict regions potentially at risk for a dengue epidemic. We formulated a mathematical model of dengue transmission, considering both human behavior and environmental conditions pertinent to the transmission of the disease. When data on past human population density, temperature and rainfall were entered into this model, it provided an accurate picture of the actual spread of dengue over recent years in four states (representing two climactic conditions) in Mexico.
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Affiliation(s)
- Gilberto Sánchez-González
- Centro de Investigación Sobre Enfermedades Infecciosas, Instituto Nacional de Salud Pública, Cuernavaca, Morelos, México
- * E-mail:
| | - Renaud Condé
- Centro de Investigación Sobre Enfermedades Infecciosas, Instituto Nacional de Salud Pública, Cuernavaca, Morelos, México
| | - Raúl Noguez Moreno
- Centro de Investigación Sobre Enfermedades Infecciosas, Instituto Nacional de Salud Pública, Cuernavaca, Morelos, México
| | - P. C. López Vázquez
- Departamento de Ciencias Naturales y Exactas, Universidad de Guadalajara, Ameca, Jalisco, México
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185
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Auteri M, La Russa F, Blanda V, Torina A. Insecticide Resistance Associated with kdr Mutations in Aedes albopictus: An Update on Worldwide Evidences. BIOMED RESEARCH INTERNATIONAL 2018; 2018:3098575. [PMID: 30175124 PMCID: PMC6098900 DOI: 10.1155/2018/3098575] [Citation(s) in RCA: 42] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 02/16/2018] [Accepted: 07/19/2018] [Indexed: 11/18/2022]
Abstract
Insecticide resistance is an increasing problem worldwide that limits the efficacy of control methods against several pests of health interest. Among them, Aedes albopictus mosquitoes are efficient vectors of relevant pathogens causing animal and human diseases worldwide, including yellow fever, chikungunya, dengue, and Zika. Different mechanisms are associated in conferring resistance to chemical insecticides. One of the most widespread and analysed mechanisms is the knockdown resistance (kdr) causing resistance to DDT and pyrethroids. The mechanism is associated with mutations in the voltage sensitive sodium channel, which is involved in beginning and propagation of action potentials in nervous cells. The mechanism was originally discovered in the housefly and then it was found in a large number of arthropods. In 2011, a kdr associated mutation was evidenced for the first time in A. albopictus and afterward several evidences were reported in the different areas of the world, including China, USA, Brazil, India, and Mediterranean Countries. This review aims to update and summarize current evidences on kdr in A. albopictus, in order to stimulate further researches to analyse in depth A. albopictus resistance status across the world, especially in countries where the presence of this vector is still an emerging issue. Such information is currently needed given the well-known vector role of A. albopictus in the transmission of severe infectious diseases. Furthermore, the widespread use of chemical insecticides for control strategies against A. albopictus progressively lead to pressure selection inducing the rise of insecticide resistance-related mutations in the species. Such event is especially evident in some countries as China, often related to a history of uncontrolled use of chemical insecticides. Thus, a careful picture on the diffusion of kdr mutations worldwide represents a milestone for the implementation of control plans and the triggering of novel research on alternative strategies for mosquito-borne infections.
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Affiliation(s)
- Michelangelo Auteri
- Laboratory of Entomology and Control of Environmental Vectors, Istituto Zooprofilattico Sperimentale della Sicilia, Via Gino Marinuzzi 3, 90129 Palermo, Italy
| | - Francesco La Russa
- Laboratory of Entomology and Control of Environmental Vectors, Istituto Zooprofilattico Sperimentale della Sicilia, Via Gino Marinuzzi 3, 90129 Palermo, Italy
| | - Valeria Blanda
- Laboratory of Entomology and Control of Environmental Vectors, Istituto Zooprofilattico Sperimentale della Sicilia, Via Gino Marinuzzi 3, 90129 Palermo, Italy
| | - Alessandra Torina
- Laboratory of Entomology and Control of Environmental Vectors, Istituto Zooprofilattico Sperimentale della Sicilia, Via Gino Marinuzzi 3, 90129 Palermo, Italy
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186
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A mathematical model for Zika virus transmission dynamics with a time-dependent mosquito biting rate. Theor Biol Med Model 2018; 15:11. [PMID: 30064447 PMCID: PMC6069545 DOI: 10.1186/s12976-018-0083-z] [Citation(s) in RCA: 28] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/18/2018] [Accepted: 07/04/2018] [Indexed: 12/29/2022] Open
Abstract
BACKGROUND Mathematical modeling has become a tool used to address many emerging diseases. One of the most basic and popular modeling frameworks is the compartmental model. Unfortunately, most of the available compartmental models developed for Zika virus (ZIKV) transmission were designed to describe and reconstruct only past, short-time ZIKV outbreaks in which the effects of seasonal change to entomological parameters can be ignored. To make an accurate long-term prediction of ZIKV transmission, the inclusion of seasonal effects into an epidemic model is unavoidable. METHODS We developed a vector-borne compartmental model to analyze the spread of the ZIKV during the 2015-2016 outbreaks in Bahia, Brazil and to investigate the impact of two vector control strategies, namely, reducing mosquito biting rates and reducing mosquito population size. The model considered the influences of seasonal change on the ZIKV transmission dynamics via the time-varying mosquito biting rate. The model was also validated by comparing the model prediction with reported data that were not used to calibrate the model. RESULTS We found that the model can give a very good fit between the simulation results and the reported Zika cases in Bahia (R-square = 0.9989). At the end of 2016, the total number of ZIKV infected people was predicted to be 1.2087 million. The model also predicted that there would not be a large outbreak from May 2016 to December 2016 due to the decrease of the susceptible pool. Implementing disease mitigation by reducing the mosquito biting rates was found to be more effective than reducing the mosquito population size. Finally, the correlation between the time series of estimated mosquito biting rates and the average temperature was also suggested. CONCLUSIONS The proposed ZIKV transmission model together with the estimated weekly biting rates can reconstruct the past long-time multi-peak ZIKV outbreaks in Bahia.
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187
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Petersen MT, da Silveira ID, Tátila-Ferreira A, David MR, Chouin-Carneiro T, Van den Wouwer L, Maes L, Maciel-de-Freitas R. The impact of the age of first blood meal and Zika virus infection on Aedes aegypti egg production and longevity. PLoS One 2018; 13:e0200766. [PMID: 30048481 PMCID: PMC6062029 DOI: 10.1371/journal.pone.0200766] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/01/2018] [Accepted: 07/02/2018] [Indexed: 11/19/2022] Open
Abstract
The impact of senescence and pathogen infection on Aedes aegypti life-history traits remains poorly understood. This laboratory study focused on the impact of Zika virus (ZIKV) infection and the age of first blood intake on blood meal and clutch sizes, and more importantly on the egg production ratio per μL of blood. Three groups of ZIKV-infected and uninfected Ae. aegypti females that received their first blood meal at 7 (young feeders), 14 (mature feeders) and 21 days old (old feeders) were monitored daily for survival and received a blood meal free of ZIKV once a week. The number of eggs laid per female were registered 3-4 days after blood feeding. Infection by ZIKV and age of feeding produced a strong negative impact on survival and oviposition success (e.g. likelihood of laying at least one egg per gonotrophic cycle). Interestingly, clutch size presented a dramatic reduction on uninfected mosquitoes, but raised from 36.5 in clutch1 to 55.1 eggs in clutch 3. Blood meal size remained stable in uninfected females, while a slight increase was observed for the infected counterparts. In uninfected Ae. aegypti, egg production was strongly affected by the age of feeding with younger females laying three times more eggs than when older. On the other hand, ZIKV-infected mosquitoes had a constant but low egg production. Overall, mosquito senescence and ZIKV infection had an impact on mosquito egg production by causing a sharp decrease in the number of eggs along the clutches for uninfected mosquitoes and a slight increase for infected mosquitoes. Despite some study limitations, our results contribute to a better understanding of the effects of mosquito aging and pathogen infection on the vectorial capacity of Ae. aegypti.
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Affiliation(s)
- Martha Thieme Petersen
- Laboratório de Transmissores de Hematozoários, Instituto Oswaldo Cruz, Fiocruz, Rio de Janeiro, RJ, Brazil
| | - Isabella Dias da Silveira
- Laboratório de Transmissores de Hematozoários, Instituto Oswaldo Cruz, Fiocruz, Rio de Janeiro, RJ, Brazil
| | - Aline Tátila-Ferreira
- Laboratório de Transmissores de Hematozoários, Instituto Oswaldo Cruz, Fiocruz, Rio de Janeiro, RJ, Brazil
| | - Mariana Rocha David
- Laboratório de Transmissores de Hematozoários, Instituto Oswaldo Cruz, Fiocruz, Rio de Janeiro, RJ, Brazil
| | - Thais Chouin-Carneiro
- Laboratório de Transmissores de Hematozoários, Instituto Oswaldo Cruz, Fiocruz, Rio de Janeiro, RJ, Brazil
- Laboratório de Imunologia Viral, Instituto Oswaldo Cruz, Fiocruz, Rio de Janeiro, RJ, Brazil
| | - Liesbeth Van den Wouwer
- Laboratory for Microbiology, Parasitology and Hygiene (LMPH), University of Antwerp, Belgium
| | - Louis Maes
- Laboratory for Microbiology, Parasitology and Hygiene (LMPH), University of Antwerp, Belgium
| | - Rafael Maciel-de-Freitas
- Laboratório de Transmissores de Hematozoários, Instituto Oswaldo Cruz, Fiocruz, Rio de Janeiro, RJ, Brazil
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188
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Kong L, Wang J, Li Z, Lai S, Liu Q, Wu H, Yang W. Modeling the Heterogeneity of Dengue Transmission in a City. INTERNATIONAL JOURNAL OF ENVIRONMENTAL RESEARCH AND PUBLIC HEALTH 2018; 15:ijerph15061128. [PMID: 29857503 PMCID: PMC6025315 DOI: 10.3390/ijerph15061128] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 02/05/2018] [Revised: 05/02/2018] [Accepted: 05/19/2018] [Indexed: 12/14/2022]
Abstract
Dengue fever is one of the most important vector-borne diseases in the world, and modeling its transmission dynamics allows for determining the key influence factors and helps to perform interventions. The heterogeneity of mosquito bites of humans during the spread of dengue virus is an important factor that should be considered when modeling the dynamics. However, traditional models generally assumed homogeneous mixing between humans and vectors, which is inconsistent with reality. In this study, we proposed a compartmental model with negative binomial distribution transmission terms to model this heterogeneity at the population level. By including the aquatic stage of mosquitoes and incorporating the impacts of the environment and climate factors, an extended model was used to simulate the 2014 dengue outbreak in Guangzhou, China, and to simulate the spread of dengue in different scenarios. The results showed that a high level of heterogeneity can result in a small peak size in an outbreak. As the level of heterogeneity decreases, the transmission dynamics approximate the dynamics predicted by the corresponding homogeneous mixing model. The simulation results from different scenarios showed that performing interventions early and decreasing the carrying capacity for mosquitoes are necessary for preventing and controlling dengue epidemics. This study contributes to a better understanding of the impact of heterogeneity during the spread of dengue virus.
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Affiliation(s)
- Lingcai Kong
- Department of Mathematics and Physics, North China Electric Power University; Baoding 071003, China.
| | - Jinfeng Wang
- State Key Laboratory of Resources and Environmental Information System, Institute of Geographic Sciences and Natural Resources Research, Chinese Academy of Sciences; Beijing 100864, China.
- Key Laboratory of Surveillance and Early-Warning on Infectious Disease, Chinese Center for Disease Control and Prevention, Beijing 102206, China.
| | - Zhongjie Li
- Key Laboratory of Surveillance and Early-Warning on Infectious Disease, Chinese Center for Disease Control and Prevention, Beijing 102206, China.
| | - Shengjie Lai
- WorldPop, Department of Geography and Environment, University of Southampton, Southampton SO17 IBJ, UK.
- Key Laboratory of Public Health Safety, Ministry of Education, School of Public Health, Fudan University, Shanghai 200433, China.
- Flowminder Foundation, Roslagsgatan 17, SE-11355 Stockholm, Sweden.
| | - Qiyong Liu
- State Key Laboratory for Infectious Disease Prevention and Control, Collaborative Innovation Center for Diagnosis and Treatment of Infectious Diseases, National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing 102206, China.
- WHO Collaborating Center for Vector Surveillance and Management, Beijing 102206, China.
| | - Haixia Wu
- State Key Laboratory for Infectious Disease Prevention and Control, Collaborative Innovation Center for Diagnosis and Treatment of Infectious Diseases, National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing 102206, China.
| | - Weizhong Yang
- Key Laboratory of Surveillance and Early-Warning on Infectious Disease, Chinese Center for Disease Control and Prevention, Beijing 102206, China.
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189
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Limiting global-mean temperature increase to 1.5-2 °C could reduce the incidence and spatial spread of dengue fever in Latin America. Proc Natl Acad Sci U S A 2018; 115:6243-6248. [PMID: 29844166 PMCID: PMC6004471 DOI: 10.1073/pnas.1718945115] [Citation(s) in RCA: 22] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/27/2022] Open
Abstract
This study is a multigeneral circulation model, multiscenario modeling exercise developed to quantify the dengue-related health benefits of limiting global warming to 1.5–2.0 °C above preindustrial levels in Latin America and the Caribbean. We estimate the impact of future climate change and population growth on the additional number of dengue cases and provide insights about the regions and periods most likely affected by changes in the length of the transmission season. Here, we show that future climate change may amplify dengue transmission and that significant impacts could be avoided by constraining global warming to 1.5 °C above preindustrial levels. Our work could be a starting point for future risk assessments incorporating other important drivers of disease such as urbanization and international traveling. The Paris Climate Agreement aims to hold global-mean temperature well below 2 °C and to pursue efforts to limit it to 1.5 °C above preindustrial levels. While it is recognized that there are benefits for human health in limiting global warming to 1.5 °C, the magnitude with which those societal benefits will be accrued remains unquantified. Crucial to public health preparedness and response is the understanding and quantification of such impacts at different levels of warming. Using dengue in Latin America as a study case, a climate-driven dengue generalized additive mixed model was developed to predict global warming impacts using five different global circulation models, all scaled to represent multiple global-mean temperature assumptions. We show that policies to limit global warming to 2 °C could reduce dengue cases by about 2.8 (0.8–7.4) million cases per year by the end of the century compared with a no-policy scenario that warms by 3.7 °C. Limiting warming further to 1.5 °C produces an additional drop in cases of about 0.5 (0.2–1.1) million per year. Furthermore, we found that by limiting global warming we can limit the expansion of the disease toward areas where incidence is currently low. We anticipate our study to be a starting point for more comprehensive studies incorporating socioeconomic scenarios and how they may further impact dengue incidence. Our results demonstrate that although future climate change may amplify dengue transmission in the region, impacts may be avoided by constraining the level of warming.
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190
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Niche conservatism of Aedes albopictus and Aedes aegypti - two mosquito species with different invasion histories. Sci Rep 2018; 8:7733. [PMID: 29769652 PMCID: PMC5955948 DOI: 10.1038/s41598-018-26092-2] [Citation(s) in RCA: 22] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/21/2017] [Accepted: 05/04/2018] [Indexed: 11/29/2022] Open
Abstract
Biological invasions have been associated with niche changes; however, their occurrence is still debated. We assess whether climatic niches between native and non-native ranges have changed during the invasion process using two globally spread mosquitoes as model species, Aedes albopictus and Aedes aegypti. Considering the different time spans since their invasions (>300 vs. 30–40 years), niche changes were expected to be more likely for Ae. aegypti than for Ae. albopictus. We used temperature and precipitation variables as descriptors for the realized climatic niches and different niche metrics to detect niche dynamics in the native and non-native ranges. High niche stability, therefore, no niche expansion but niche conservatism was revealed for both species. High niche unfilling for Ae. albopictus indicates a great potential for further expansion. Highest niche occupancies in non-native ranges occurred either under more temperate (North America, Europe) or tropical conditions (South America, Africa). Aedes aegypti has been able to fill its native climatic niche in the non-native ranges, with very low unfilling. Our results challenge the assumption of rapid evolutionary change of climatic niches as a requirement for global invasions but support the use of native range-based niche models to project future invasion risk on a large scale.
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191
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Stone CM, Schwab SR, Fonseca DM, Fefferman NH. Human movement, cooperation and the effectiveness of coordinated vector control strategies. J R Soc Interface 2018; 14:rsif.2017.0336. [PMID: 28855386 DOI: 10.1098/rsif.2017.0336] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/08/2017] [Accepted: 08/03/2017] [Indexed: 12/22/2022] Open
Abstract
Vector-borne disease transmission is often typified by highly focal transmission and influenced by movement of hosts and vectors across different scales. The ecological and environmental conditions (including those created by humans through vector control programmes) that result in metapopulation dynamics remain poorly understood. The development of control strategies that would most effectively limit outbreaks given such dynamics is particularly urgent given the recent epidemics of dengue, chikungunya and Zika viruses. We developed a stochastic, spatial model of vector-borne disease transmission, allowing for movement of hosts between patches. Our model is applicable to arbovirus transmission by Aedes aegypti in urban settings and was parametrized to capture Zika virus transmission in particular. Using simulations, we investigated the extent to which two aspects of vector control strategies are affected by human commuting patterns: the extent of coordination and cooperation between neighbouring communities. We find that transmission intensity is highest at intermediate levels of host movement. The extent to which coordination of control activities among neighbouring patches decreases the prevalence of infection is affected by both how frequently humans commute and the proportion of neighbouring patches that commits to vector surveillance and control activities. At high levels of host movement, patches that do not contribute to vector control may act as sources of infection in the landscape, yet have comparable levels of prevalence as patches that do cooperate. This result suggests that real cooperation among neighbours will be critical to the development of effective pro-active strategies for vector-borne disease control in today's commuter-linked communities.
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Affiliation(s)
- Chris M Stone
- Illinois Natural History Survey, University of Illinois at Urbana-Champaign, Champaign, IL, USA .,Department of Ecology and Evolutionary Biology, University of Tennessee, Knoxville, TN, USA
| | - Samantha R Schwab
- Program in Ecology and Evolutionary Biology, Rutgers University, New Brunswick, NJ, USA
| | - Dina M Fonseca
- Center for Vector Biology, Rutgers University, New Brunswick, NJ, USA
| | - Nina H Fefferman
- Department of Ecology and Evolutionary Biology, University of Tennessee, Knoxville, TN, USA
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192
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Schmidt CA, Comeau G, Monaghan AJ, Williamson DJ, Ernst KC. Effects of desiccation stress on adult female longevity in Aedes aegypti and Ae. albopictus (Diptera: Culicidae): results of a systematic review and pooled survival analysis. Parasit Vectors 2018; 11:267. [PMID: 29695282 PMCID: PMC5918765 DOI: 10.1186/s13071-018-2808-6] [Citation(s) in RCA: 39] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/21/2017] [Accepted: 03/25/2018] [Indexed: 11/21/2022] Open
Abstract
Background Transmission dynamics of mosquito-borne viruses such as dengue, Zika and chikungunya are affected by the longevity of the adult female mosquito. Environmental conditions influence the survival of adult female Aedes mosquitoes, the primary vectors of these viruses. While the association of temperature with Aedes mortality has been relatively well-explored, the role of humidity is less established. The current study’s goals were to compile knowledge of the influence of humidity on adult survival in the important vector species Aedes aegypti and Ae. albopictus, and to quantify this relationship while accounting for the modifying effect of temperature. Methods We performed a systematic literature review to identify studies reporting experimental results informing the relationships among temperature, humidity and adult survival in Ae. aegypti and Ae. albopictus. Using a novel simulation approach to harmonize disparate survival data, we conducted pooled survival analyses via stratified and mixed effects Cox regression to estimate temperature-dependent associations between humidity and mortality risk for these species across a broad range of temperatures and vapor pressure deficits. Results After screening 1517 articles, 17 studies (one in semi-field and 16 in laboratory settings) met inclusion criteria and collectively reported results for 192 survival experiments. We review and synthesize relevant findings from these studies. Our stratified model estimated a strong temperature-dependent association of humidity with mortality in both species, though associations were not significant for Ae. albopictus in the mixed effects model. Lowest mortality risks were estimated around 27.5 °C and 21.5 °C for Ae. aegypti and Ae. albopictus, respectively, and mortality increased non-linearly with decreasing humidity. Aedes aegypti had a survival advantage relative to Ae. albopictus in the stratified model under most conditions, but species differences were not significant in the mixed effects model. Conclusions Humidity is associated with mortality risk in adult female Ae. aegypti in controlled settings. Data are limited at low humidities, temperature extremes, and for Ae. albopictus, and further studies should be conducted to reduce model uncertainty in these contexts. Desiccation is likely an important factor in Aedes population dynamics and viral transmission in arid regions. Models of Aedes-borne virus transmission may be improved by more comprehensively representing humidity effects. Electronic supplementary material The online version of this article (10.1186/s13071-018-2808-6) contains supplementary material, which is available to authorized users.
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Affiliation(s)
- Chris A Schmidt
- Department of Epidemiology and Biostatistics, Mel & Enid Zuckerman College of Public Health, University of Arizona, 1295 N. Martin Ave, Tucson, AZ, 85724, USA. .,National Center for Atmospheric Research, P.O. Box 3000, Boulder, CO, 80307, USA.
| | - Genevieve Comeau
- Department of Entomology, College of Agriculture & Life Sciences, University of Arizona, P.O. Box 210036, Tucson, AZ, 85721, USA
| | - Andrew J Monaghan
- National Center for Atmospheric Research, P.O. Box 3000, Boulder, CO, 80307, USA
| | - Daniel J Williamson
- Department of Entomology, College of Agriculture & Life Sciences, University of Arizona, P.O. Box 210036, Tucson, AZ, 85721, USA
| | - Kacey C Ernst
- Department of Epidemiology and Biostatistics, Mel & Enid Zuckerman College of Public Health, University of Arizona, 1295 N. Martin Ave, Tucson, AZ, 85724, USA.,Department of Entomology, College of Agriculture & Life Sciences, University of Arizona, P.O. Box 210036, Tucson, AZ, 85721, USA
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193
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Siraj AS, Rodriguez-Barraquer I, Barker CM, Tejedor-Garavito N, Harding D, Lorton C, Lukacevic D, Oates G, Espana G, Kraemer MUG, Manore C, Johansson MA, Tatem AJ, Reiner RC, Perkins TA. Spatiotemporal incidence of Zika and associated environmental drivers for the 2015-2016 epidemic in Colombia. Sci Data 2018; 5:180073. [PMID: 29688216 PMCID: PMC5914286 DOI: 10.1038/sdata.2018.73] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/03/2017] [Accepted: 03/19/2018] [Indexed: 11/14/2022] Open
Abstract
Despite a long history of mosquito-borne virus epidemics in the Americas, the impact of the Zika virus (ZIKV) epidemic of 2015–2016 was unexpected. The need for scientifically informed decision-making is driving research to understand the emergence and spread of ZIKV. To support that research, we assembled a data set of key covariates for modeling ZIKV transmission dynamics in Colombia, where ZIKV transmission was widespread and the government made incidence data publically available. On a weekly basis between January 1, 2014 and October 1, 2016 at three administrative levels, we collated spatiotemporal Zika incidence data, nine environmental variables, and demographic data into a single downloadable database. These new datasets and those we identified, processed, and assembled at comparable spatial and temporal resolutions will save future researchers considerable time and effort in performing these data processing steps, enabling them to focus instead on extracting epidemiological insights from this important data set. Similar approaches could prove useful for filling data gaps to enable epidemiological analyses of future disease emergence events.
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Affiliation(s)
- Amir S Siraj
- Department of Biological Sciences and Eck Institute for Global Health, University of Notre Dame, 345 Galvin Hall, Notre Dame, IN 46556, USA
| | - Isabel Rodriguez-Barraquer
- Department of Epidemiology, Johns Hopkins Bloomberg School of Public Health, 615 N. Wolfe Street, Baltimore, MD 21205, USA
| | - Christopher M Barker
- Department of Pathology, Microbiology and Immunology, University of California, 5329 Vet Med 3A, Davis, CA 95616, USA
| | - Natalia Tejedor-Garavito
- WorldPop, Department of Geography and Environment, University of Southampton, University Road, Southampton, SO17 1BJ, UK.,Flowminder Foundation, Roslagsgatan 17, SE-11355, Stockholm, Sweden
| | - Dennis Harding
- Institute for Disease Modeling, Bellevue, 3150 139th Ave SE, WA 98005, USA
| | - Christopher Lorton
- Institute for Disease Modeling, Bellevue, 3150 139th Ave SE, WA 98005, USA
| | - Dejan Lukacevic
- Institute for Disease Modeling, Bellevue, 3150 139th Ave SE, WA 98005, USA
| | - Gene Oates
- Institute for Disease Modeling, Bellevue, 3150 139th Ave SE, WA 98005, USA
| | - Guido Espana
- Department of Biological Sciences and Eck Institute for Global Health, University of Notre Dame, 345 Galvin Hall, Notre Dame, IN 46556, USA
| | - Moritz U G Kraemer
- Spatial Ecology and Epidemiology Group, Department of Zoology, University of Oxford, South Parks Road, Oxford OX1 3PS, UK.,Harvard Medical School, 10 Shattuck Street, Boston, MA 02115, USA.,Boston Children's Hospital, 300 Longwood Ave, Boston, MA 02115, USA
| | - Carrie Manore
- Theoretical Biology and Biophysics Group, Los Alamos National Laboratory, Los Alamos, NM 87545, USA
| | - Michael A Johansson
- Centers for Disease Control and Prevention, 1324 Calle Canada, San Juan, PR 00920-3860, USA.,Center for Communicable Disease Dynamics, Harvard T.H. Chan School of Public Health, 677 Huntington Ave., Suite 506, Boston, MA 02115, USA
| | - Andrew J Tatem
- WorldPop, Department of Geography and Environment, University of Southampton, University Road, Southampton, SO17 1BJ, UK.,Flowminder Foundation, Roslagsgatan 17, SE-11355, Stockholm, Sweden
| | - Robert C Reiner
- Department of Global Health and Institute for Health Metrics and Evaluation, University of Washington, 2301 Fifth Ave., Suite 600, Seattle, WA 98121, USA
| | - T Alex Perkins
- Department of Biological Sciences and Eck Institute for Global Health, University of Notre Dame, 345 Galvin Hall, Notre Dame, IN 46556, USA
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194
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Abstract
Climate change is expected to impact across every domain of society, including health. The majority of the world's population is susceptible to pathological, infectious disease whose life cycles are sensitive to environmental factors across different physical phases including air, water and soil. Nearly all so-called neglected tropical diseases (NTDs) fall into this category, meaning that future geographic patterns of transmission of dozens of infections are likely to be affected by climate change over the short (seasonal), medium (annual) and long (decadal) term. This review offers an introduction into the terms and processes deployed in modelling climate change and reviews the state of the art in terms of research into how climate change may affect future transmission of NTDs. The 34 infections included in this chapter are drawn from the WHO NTD list and the WHO blueprint list of priority diseases. For the majority of infections, some evidence is available of which environmental factors contribute to the population biology of parasites, vectors and zoonotic hosts. There is a general paucity of published research on the potential effects of decadal climate change, with some exceptions, mainly in vector-borne diseases.
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Affiliation(s)
- Mark Booth
- Newcastle University, Institute of Health and Society, Newcastle upon Tyne, United Kingdom.
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195
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Zapletal J, Erraguntla M, Adelman ZN, Myles KM, Lawley MA. Impacts of diurnal temperature and larval density on aquatic development of Aedes aegypti. PLoS One 2018. [PMID: 29513751 PMCID: PMC5841800 DOI: 10.1371/journal.pone.0194025] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022] Open
Abstract
The increasing range of Aedes aegypti, vector for Zika, dengue, chikungunya, and other viruses, has brought attention to the need to understand the population and transmission dynamics of this mosquito. It is well understood that environmental factors and breeding site characteristics play a role in organismal development and the potential to transmit pathogens. In this study, we observe the impact of larval density in combination with diurnal temperature on the time to pupation, emergence, and mortality of Aedes aegypti. Experiments were conducted at two diurnal temperature ranges based on 10 years of historical temperatures of Houston, Texas (21–32°C and 26.5–37.5°C). Experiments at constant temperatures (26.5°C, 32°C) were also conducted for comparison. At each temperature setting, five larval densities were observed (0.2, 1, 2, 4, 5 larvae per mL of water). Data collected shows significant differences in time to first pupation, time of first emergence, maximum rate of pupation, time of maximum rate of pupation, maximum rate of emergence, time of maximum rate of emergence, final average proportion of adult emergence, and average proportion of larval mortality. Further, data indicates a significant interactive effect between temperature fluctuation and larval density on these measures. Thus, wild population estimates should account for temperature fluctuations, larval density, and their interaction in low-volume containers.
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Affiliation(s)
- Josef Zapletal
- Department of Industrial and Systems Engineering, Texas A&M University, College Station, Texas, United States of America
- * E-mail:
| | - Madhav Erraguntla
- Department of Industrial and Systems Engineering, Texas A&M University, College Station, Texas, United States of America
| | - Zach N. Adelman
- Department of Entomology, Texas A&M University, College Station, Texas, United States of America
| | - Kevin M. Myles
- Department of Entomology, Texas A&M University, College Station, Texas, United States of America
| | - Mark A. Lawley
- Department of Industrial and Systems Engineering, Texas A&M University, College Station, Texas, United States of America
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196
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Kesetyaningsih TW, Andarini S, Sudarto, Pramoedyo H. DETERMINATION OF ENVIRONMENTAL FACTORS AFFECTING DENGUE INCIDENCE IN SLEMAN DISTRICT, YOGYAKARTA, INDONESIA. Afr J Infect Dis 2018; 12:13-25. [PMID: 29619427 PMCID: PMC5876768 DOI: 10.2101/ajid.12v1s.3] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/16/2017] [Revised: 09/17/2017] [Accepted: 09/21/2017] [Indexed: 11/14/2022] Open
Abstract
Background: Dengue is a disease related to the environment that spreads rapidly. Prevention movement is considered ineffective; therefore, a more efficient early warning system is required. It is required strongly correlated variables to as predictor in early warning system. This study aims to identify the environmental conditions associated with dengue. Materials and methods: This ecological study was conducted on five sub-districts selected based on the trend of the incidence. Data land cover and elevation obtained using GIS. Climate data were obtained from Meteorology and Climatology and Geophysics Agency of Yogyakarta. Results: There were 1.150 dengue cases from 2008-2013 obtained from District Health Office. The spatial pattern is clustered in all sub-districts (Z-score < -2.58). There is a positive correlation between land cover and dengue (p 0.000; r 0.284) and a negative correlation between elevation areas and dengue (p 0.000; r - 0.127). Multiple Regression Test shows the effect of humidity (p 0.000) and rainfall (p 0.002) with a contribution of 13.5% - 27.4% (r2 0.135 – 0.274), while temperature has no effect in all sub-districts (p > 0.05). There is no effect of climate parameters in sporadic dengue areas (p > 0.05). Conclusion: It is concluded that dengue in Sleman is clustered and associated with the environment parameter, even though it does not have close correlation. High elevated and small building area is consistent with the lower dengue cases. Humidity and rainfall affect dengue, but temperature does not affect dengue.
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Affiliation(s)
- Tri Wulandari Kesetyaningsih
- Department of Parasitology, Faculty of Medicine and Health Science, Universitas Muhammadiyah Yogyakarta, Indonesia.,Doctoral Program of Environmental Science, Brawijaya University, Malang, Indonesia
| | - Sri Andarini
- Department of Public Health, Faculty of Medicine, Brawijaya University, Malang, Indonesia
| | - Sudarto
- Department of Soil Science, Faculty of Agriculture Brawijaya University, Malang, Indonesia
| | - Henny Pramoedyo
- Department of Statistics, Faculty of Mathematics and Natural Science, Brawijaya University, Malang, Indonesia
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197
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Lauer SA, Sakrejda K, Ray EL, Keegan LT, Bi Q, Suangtho P, Hinjoy S, Iamsirithaworn S, Suthachana S, Laosiritaworn Y, Cummings DAT, Lessler J, Reich NG. Prospective forecasts of annual dengue hemorrhagic fever incidence in Thailand, 2010-2014. Proc Natl Acad Sci U S A 2018; 115:E2175-E2182. [PMID: 29463757 PMCID: PMC5877997 DOI: 10.1073/pnas.1714457115] [Citation(s) in RCA: 41] [Impact Index Per Article: 6.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022] Open
Abstract
Dengue hemorrhagic fever (DHF), a severe manifestation of dengue viral infection that can cause severe bleeding, organ impairment, and even death, affects between 15,000 and 105,000 people each year in Thailand. While all Thai provinces experience at least one DHF case most years, the distribution of cases shifts regionally from year to year. Accurately forecasting where DHF outbreaks occur before the dengue season could help public health officials prioritize public health activities. We develop statistical models that use biologically plausible covariates, observed by April each year, to forecast the cumulative DHF incidence for the remainder of the year. We perform cross-validation during the training phase (2000-2009) to select the covariates for these models. A parsimonious model based on preseason incidence outperforms the 10-y median for 65% of province-level annual forecasts, reduces the mean absolute error by 19%, and successfully forecasts outbreaks (area under the receiver operating characteristic curve = 0.84) over the testing period (2010-2014). We find that functions of past incidence contribute most strongly to model performance, whereas the importance of environmental covariates varies regionally. This work illustrates that accurate forecasts of dengue risk are possible in a policy-relevant timeframe.
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Affiliation(s)
- Stephen A Lauer
- Department of Biostatistics and Epidemiology, School of Public Health and Health Sciences, University of Massachusetts, Amherst, MA 01003;
| | - Krzysztof Sakrejda
- Department of Biostatistics and Epidemiology, School of Public Health and Health Sciences, University of Massachusetts, Amherst, MA 01003
| | - Evan L Ray
- Department of Mathematics and Statistics, Mount Holyoke College, South Hadley, MA 01075
| | - Lindsay T Keegan
- Department of Epidemiology, Johns Hopkins Bloomberg School of Public Health, Baltimore, MD 21205
| | - Qifang Bi
- Department of Epidemiology, Johns Hopkins Bloomberg School of Public Health, Baltimore, MD 21205
| | - Paphanij Suangtho
- Bureau of Epidemiology, Ministry of Public Health, Nonthaburi 11000, Thailand
| | - Soawapak Hinjoy
- Bureau of Epidemiology, Ministry of Public Health, Nonthaburi 11000, Thailand
| | - Sopon Iamsirithaworn
- Department of Disease Control, Bureau of Epidemiology, Ministry of Public Health, Nonthaburi 11000, Thailand
| | - Suthanun Suthachana
- Bureau of Epidemiology, Ministry of Public Health, Nonthaburi 11000, Thailand
| | | | - Derek A T Cummings
- Department of Biology and the Emerging Pathogens Institute, University of Florida, Gainesville, FL 32611
| | - Justin Lessler
- Department of Epidemiology, Johns Hopkins Bloomberg School of Public Health, Baltimore, MD 21205
| | - Nicholas G Reich
- Department of Biostatistics and Epidemiology, School of Public Health and Health Sciences, University of Massachusetts, Amherst, MA 01003
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198
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Ducheyne E, Tran Minh NN, Haddad N, Bryssinckx W, Buliva E, Simard F, Malik MR, Charlier J, De Waele V, Mahmoud O, Mukhtar M, Bouattour A, Hussain A, Hendrickx G, Roiz D. Current and future distribution of Aedes aegypti and Aedes albopictus (Diptera: Culicidae) in WHO Eastern Mediterranean Region. Int J Health Geogr 2018; 17:4. [PMID: 29444675 PMCID: PMC5813415 DOI: 10.1186/s12942-018-0125-0] [Citation(s) in RCA: 47] [Impact Index Per Article: 7.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/06/2017] [Accepted: 02/02/2018] [Indexed: 12/20/2022] Open
Abstract
Background Aedes-borne diseases as dengue, zika, chikungunya and yellow fever are an emerging problem worldwide, being transmitted by Aedes aegypti and Aedes albopictus. Lack of up to date information about the distribution of Aedes species hampers surveillance and control. Global databases have been compiled but these did not capture data in the WHO Eastern Mediterranean Region (EMR), and any models built using these datasets fail to identify highly suitable areas where one or both species may occur. The first objective of this study was therefore to update the existing Ae. aegypti (Linnaeus, 1762) and Ae. albopictus (Skuse, 1895) compendia and the second objective was to generate species distribution models targeted to the EMR. A final objective was to engage the WHO points of contacts within the region to provide feedback and hence validate all model outputs. Methods The Ae. aegypti and Ae. albopictus compendia provided by Kraemer et al. (Sci Data 2:150035, 2015; Dryad Digit Repos, 2015) were used as starting points. These datasets were extended with more recent species and disease data. In the next step, these sets were filtered using the Köppen–Geiger classification and the Mahalanobis distance. The occurrence data were supplemented with pseudo-absence data as input to Random Forests. The resulting suitability and maximum risk of establishment maps were combined into hard-classified maps per country for expert validation. Results The EMR datasets consisted of 1995 presence locations for Ae. aegypti and 2868 presence locations for Ae. albopictus. The resulting suitability maps indicated that there exist areas with high suitability and/or maximum risk of establishment for these disease vectors in contrast with previous model output. Precipitation and host availability, expressed as population density and night-time lights, were the most important variables for Ae. aegypti. Host availability was the most important predictor in case of Ae. albopictus. Internal validation was assessed geographically. External validation showed high agreement between the predicted maps and the experts’ extensive knowledge of the terrain. Conclusion Maps of distribution and maximum risk of establishment were created for Ae. aegypti and Ae. albopictus for the WHO EMR. These region-specific maps highlighted data gaps and these gaps will be filled using targeted monitoring and surveillance. This will increase the awareness and preparedness of the different countries for Aedes borne diseases. Electronic supplementary material The online version of this article (10.1186/s12942-018-0125-0) contains supplementary material, which is available to authorized users.
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Affiliation(s)
| | - Nhu Nguyen Tran Minh
- Regional Office for the Eastern Mediterranean, World Health Organisation, Cairo, Egypt
| | - Nabil Haddad
- Laboratory of Immunology and Vector-Borne Diseases, Faculty of Public Health, Lebanese University, Fanar, Lebanon
| | | | - Evans Buliva
- Regional Office for the Eastern Mediterranean, World Health Organisation, Cairo, Egypt
| | | | - Mamunur Rahman Malik
- Regional Office for the Eastern Mediterranean, World Health Organisation, Cairo, Egypt
| | | | | | - Osama Mahmoud
- Directorate General for Disease Surveillance and Control, Ministry of Health, Muscat, Sultanate of Oman
| | | | | | | | | | - David Roiz
- Regional Office for the Eastern Mediterranean, World Health Organisation, Cairo, Egypt.,MIVEGEC Lab, IRD/CNRS/UM, Montpellier, France
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199
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Ding F, Fu J, Jiang D, Hao M, Lin G. Mapping the spatial distribution of Aedes aegypti and Aedes albopictus. Acta Trop 2018; 178:155-162. [PMID: 29191515 DOI: 10.1016/j.actatropica.2017.11.020] [Citation(s) in RCA: 53] [Impact Index Per Article: 8.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/23/2017] [Revised: 10/31/2017] [Accepted: 11/26/2017] [Indexed: 12/16/2022]
Abstract
Mosquito-borne infectious diseases, such as Rift Valley fever, Dengue, Chikungunya and Zika, have caused mass human death with the transnational expansion fueled by economic globalization. Simulating the distribution of the disease vectors is of great importance in formulating public health planning and disease control strategies. In the present study, we simulated the global distribution of Aedes aegypti and Aedes albopictus at a 5×5km spatial resolution with high-dimensional multidisciplinary datasets and machine learning methods Three relatively popular and robust machine learning models, including support vector machine (SVM), gradient boosting machine (GBM) and random forest (RF), were used. During the fine-tuning process based on training datasets of A. aegypti and A. albopictus, RF models achieved the highest performance with an area under the curve (AUC) of 0.973 and 0.974, respectively, followed by GBM (AUC of 0.971 and 0.972, respectively) and SVM (AUC of 0.963 and 0.964, respectively) models. The simulation difference between RF and GBM models was not statistically significant (p>0.05) based on the validation datasets, whereas statistically significant differences (p<0.05) were observed for RF and GBM simulations compared with SVM simulations. From the simulated maps derived from RF models, we observed that the distribution of A. albopictus was wider than that of A. aegypti along a latitudinal gradient. The discriminatory power of each factor in simulating the global distribution of the two species was also analyzed. Our results provided fundamental information for further study on disease transmission simulation and risk assessment.
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200
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Weetman D, Kamgang B, Badolo A, Moyes CL, Shearer FM, Coulibaly M, Pinto J, Lambrechts L, McCall PJ. Aedes Mosquitoes and Aedes-Borne Arboviruses in Africa: Current and Future Threats. INTERNATIONAL JOURNAL OF ENVIRONMENTAL RESEARCH AND PUBLIC HEALTH 2018; 15:ijerph15020220. [PMID: 29382107 PMCID: PMC5858289 DOI: 10.3390/ijerph15020220] [Citation(s) in RCA: 130] [Impact Index Per Article: 21.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 12/12/2017] [Revised: 01/23/2018] [Accepted: 01/24/2018] [Indexed: 12/21/2022]
Abstract
The Zika crisis drew attention to the long-overlooked problem of arboviruses transmitted by Aedes mosquitoes in Africa. Yellow fever, dengue, chikungunya and Zika are poorly controlled in Africa and often go unrecognized. However, to combat these diseases, both in Africa and worldwide, it is crucial that this situation changes. Here, we review available data on the distribution of each disease in Africa, their Aedes vectors, transmission potential, and challenges and opportunities for Aedes control. Data on disease and vector ranges are sparse, and consequently maps of risk are uncertain. Issues such as genetic and ecological diversity, and opportunities for integration with malaria control, are primarily African; others such as ever-increasing urbanization, insecticide resistance and lack of evidence for most control-interventions reflect problems throughout the tropics. We identify key knowledge gaps and future research areas, and in particular, highlight the need to improve knowledge of the distributions of disease and major vectors, insecticide resistance, and to develop specific plans and capacity for arboviral disease surveillance, prevention and outbreak responses.
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Affiliation(s)
- David Weetman
- Department of Vector Biology, Liverpool School of Tropical Medicine, Pembroke Place, Liverpool L3 5QA, UK.
| | - Basile Kamgang
- Centre for Research in Infectious Diseases, Yaoundé PO Box 13501, Cameroon.
| | - Athanase Badolo
- Laboratoire d'Entomologie Fondamentale et Appliquée (LEFA), Université Ouaga 1 Pr Joseph Ki-Zerbo, Ouagadougou 03 BP 7021, Burkina Faso.
| | - Catherine L Moyes
- Big Data Institute, Li Ka Shing Centre for Health Information and Discovery, University of Oxford, Oxford OX3 7LF, UK.
| | - Freya M Shearer
- Big Data Institute, Li Ka Shing Centre for Health Information and Discovery, University of Oxford, Oxford OX3 7LF, UK.
| | - Mamadou Coulibaly
- University of Sciences, Techniques and Technologies of Bamako, Bamako BP 1805, Mali.
| | - João Pinto
- Global Health and Tropical Medicine (GHTM), Instituto de Higiene e Medicina Tropical (IHMT), Universidade Nova de Lisboa (UNL), Rua da Junqueira 100, 1349-008 Lisbon, Portugal.
| | - Louis Lambrechts
- Insect-Virus Interactions, Department of Genomes and Genetics, Institut Pasteur, 75015 Paris, France.
- Centre National de la Recherche Scientifique, Unité Mixte de Recherche 2000, 75015 Paris, France.
| | - Philip J McCall
- Department of Vector Biology, Liverpool School of Tropical Medicine, Pembroke Place, Liverpool L3 5QA, UK.
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