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Loreti E, Perata P. ERFVII transcription factors and their role in the adaptation to hypoxia in Arabidopsis and crops. Front Genet 2023; 14:1213839. [PMID: 37662843 PMCID: PMC10469677 DOI: 10.3389/fgene.2023.1213839] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/28/2023] [Accepted: 08/01/2023] [Indexed: 09/05/2023] Open
Abstract
In this review, we focus on ethylene transcription factors (ERFs), which are a crucial family of transcription factors that regulate plant development and stress responses. ERFVII transcription factors have been identified and studied in several crop species, including rice, wheat, maize, barley, and soybean. These transcription factors are known to be involved in regulating the plant's response to low oxygen stress-hypoxia and could thus improve crop yields under suboptimal growing conditions. In rice (Oryza sativa) several ERFVII genes have been identified and characterized, including SUBMERGENCE 1A (SUB1A), which enables rice to tolerate submergence. The SUB1A gene was used in the development of SUB1 rice varieties, which are now widely grown in flood-prone areas and have been shown to improve yields and farmer livelihoods. The oxygen sensor in plants was discovered using the model plant Arabidopsis. The mechanism is based on the destabilization of ERFVII protein via the N-degron pathway under aerobic conditions. During hypoxia, the stabilized ERFVIIs translocate to the nucleus where they activate the transcription of hypoxia-responsive genes (HRGs). In summary, the identification and characterization of ERFVII transcription factors and their mechanism of action could lead to the development of new crop varieties with improved tolerance to low oxygen stress, which could have important implications for global food security.
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Affiliation(s)
- Elena Loreti
- Institute of Agricultural Biology and Biotechnology, CNR, National Research Council, Pisa, Italy
| | - Pierdomenico Perata
- PlantLab, Center of Plant Sciences, Sant’Anna School of Advanced Studies, Pisa, Italy
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Zahra S, Shaheen T, Qasim M, Mahmood-Ur-Rahman, Hussain M, Zulfiqar S, Shaukat K, Mehboob-Ur-Rahman. Genome-wide survey of HMA gene family and its characterization in wheat ( Triticum aestivum). PeerJ 2023; 11:e14920. [PMID: 36890869 PMCID: PMC9987320 DOI: 10.7717/peerj.14920] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/16/2022] [Accepted: 01/27/2023] [Indexed: 03/06/2023] Open
Abstract
Background Abiotic stresses, particularly drought and heavy metal toxicity, have presented a significant risk to long-term agricultural output around the world. Although the heavy-metal-associated domain (HMA) gene family has been widely explored in Arabidopsis and other plants, it has not been thoroughly studied in wheat (Triticum aestivum). This study was proposed to investigate the HMA gene family in wheat. Methods To analyze the phylogenetic relationships, gene structure, gene ontology, and conserved motifs, a comparative study of wheat HMA genes with the Arabidopsis genome was performed. Results A total of 27 T. aestivum proteins belonging to the HMA gene family were identified in this study, with amino acid counts ranging from 262 to 1,071. HMA proteins were found to be grouped into three subgroups in a phylogenetic tree, and closely related proteins in the tree showed the same expression patterns as motifs found in distinct subgroups. Gene structural study elucidated that intron and exon arrangement differed by family. Conclusion As a result, the current work offered important information regarding HMA family genes in the T. aestivum genome, which will be valuable in understanding their putative functions in other wheat species.
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Affiliation(s)
- Sadaf Zahra
- Department of Bioinformatics and Biotechnology, Government College University, Faisalabad, Pakistan
| | - Tayyaba Shaheen
- Department of Bioinformatics and Biotechnology, Government College University, Faisalabad, Pakistan
| | - Muhammad Qasim
- Department of Bioinformatics and Biotechnology, Government College University, Faisalabad, Pakistan
| | - Mahmood-Ur-Rahman
- Department of Bioinformatics and Biotechnology, Government College University, Faisalabad, Pakistan
| | - Momina Hussain
- Department of Biotechnology, Faculty of Life Sciences, University of Okara, Okara, Pakistan
| | - Sana Zulfiqar
- Plant Genomics and Molecular Breeding Laboratory, National Institute for Biotechnology and Genetic Engineering College, Pakistan Institute of Engineering and Applied Sciences (NIBGE-C, PIEAS), Faisalabad, Punjab, Pakistan
| | - Kanval Shaukat
- Department of Botany, University of Balochistan, Quetta, Pakistan
| | - Mehboob-Ur-Rahman
- Plant Genomics and Molecular Breeding Laboratory, National Institute for Biotechnology and Genetic Engineering College, Pakistan Institute of Engineering and Applied Sciences (NIBGE-C, PIEAS), Faisalabad, Punjab, Pakistan
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Khodaee L, Azizinezhad R, Etminan AR, Khosroshahi M. Assessment of genetic diversity among Iranian Aegilops triuncialis accessions using ISSR, SCoT, and CBDP markers. J Genet Eng Biotechnol 2021; 19:5. [PMID: 33428012 PMCID: PMC7801538 DOI: 10.1186/s43141-020-00107-w] [Citation(s) in RCA: 17] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/25/2020] [Accepted: 12/21/2020] [Indexed: 11/17/2022]
Abstract
BACKGROUND Crop wild relatives (CWRs) are commonly used as a suitable genetic reservoir for plant breeding. They can be used for enhancing the tolerance of plant varieties to biotic and abiotic stresses. Studying the genetic diversity of related wheat species in Iran could be useful to improve different traits of bread wheat, since the country is one of the major centers of genetic diversity and distribution of Aegilops species. Therefore, the aim of the present study was to determine the relationship among 48 Aegilops triuncialis accessions using three DNA marker systems, including start codon targeted (SCoT), CAAT box-derived polymorphism (CBDP), and inter-simple sequence repeat (ISSR) markers. RESULTS A total of 359 amplified DNA fragments were generated using 13 CBDP, 14 SCoT, and 16 ISSR primers that produced 96, 147, and 152 bands, respectively. The discriminating power of the three markers was assessed using polymorphism information content (PIC), marker index (MI), and resolving power (Rp). The mean values of PIC for ISSR, SCoT, and CBDP markers were 0.3, 0.26, and 0.34, respectively, indicating the efficiency of the three markers in detecting polymorphism among the studied accessions. ISSR markers had the highest values of MI, Rp, and polymorphism percentage as compared to SCoT and CBDP markers. Based on the Shannon index and heterozygosity values, genetic diversity in the Alborz population was more than in other populations. The accessions were classified into six, five, and five groups based on ISSR, SCoT, and CBDP using the UPGMA method. According to the results of cluster and PCoA analyses, the variation patterns corresponded with the geographical distribution of the Ae. triuncialis accessions. CONCLUSIONS The three markers provided a comprehensive pattern of the genetic diversity among the Iranian Ae. triuncialis accessions. This information could allow for a future insight into wheat breeding programs.
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Affiliation(s)
- Lavin Khodaee
- Department of Biotechnology and Plant Breeding, Islamic Azad University Science and Research Branch, Tehran, Iran
| | - Reza Azizinezhad
- Department of Biotechnology and Plant Breeding, Islamic Azad University Science and Research Branch, Tehran, Iran.
| | - Ali Reza Etminan
- Department of Plant Breeding and Biotechnology, Kermanshah Branch, Islamic Azad University, Kermanshah, Iran
| | - Mahmoud Khosroshahi
- Department of Biotechnology and Plant Breeding, Islamic Azad University Science and Research Branch, Tehran, Iran
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Al Khateeb W, Muhaidat R, Alahmed S, Al Zoubi MS, Al-Batayneh KM, El-Oqlah A, Abo Gamar M, Hussein E, Aljabali AA, Alkaraki AK. Heat shock proteins gene expression and physiological responses in durum wheat ( Triticum durum) under salt stress. PHYSIOLOGY AND MOLECULAR BIOLOGY OF PLANTS : AN INTERNATIONAL JOURNAL OF FUNCTIONAL PLANT BIOLOGY 2020; 26:1599-1608. [PMID: 32801489 PMCID: PMC7415065 DOI: 10.1007/s12298-020-00850-x] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/02/2020] [Revised: 06/29/2020] [Accepted: 07/10/2020] [Indexed: 05/13/2023]
Abstract
Salt stress is a major abiotic stress causing adverse effects on plant growth and development. The aim of this study was to investigate the effect of NaCl stress on growth, stress indicator parameters (lipid peroxidation, chlorophyll content and proline content), yield, and the expression of heat shock proteins genes (Hsp17.8, Hsp26.3, Hsp70 and Hsp101) of five Jordanian durum wheat (Triticum durum) landraces. Plants were irrigated with tap water as control or 200 mM NaCl. Significant differences among the 5 Triticum durum landraces in terms of growth parameters, stress indicator parameters, and expression of heat shock proteins genes were observed. Salt stressed landraces demonstrated decreased growth, increased levels of stress indicator parameters, and upregulation in Hsp17.8, Hsp26.3, Hsp70 and Hsp101 expression. Landraces T11 and M23 showed the highest growth, lowest levels of stress indicator parameters, and high expression of heat shock protein genes under NaCl stress. Whereas, J2 and A8 landraces showed the lowest growth, highest levels of stress indicator parameters and low expression of heat shock protein genes under NaCl stress. In conclusion, NaCl stress caused significant reduction in growth parameters, increased level of lipid peroxidation and proline content and upregulation in heat shock proteins gene expression levels. Growth, stress indicator parameters and gene expression results suggest that T11 and M23 landraces are the most NaCl stress tolerant landraces and could be used to enhance the gene pool in wheat breeding programs.
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Affiliation(s)
- Wesam Al Khateeb
- Department of Biological Sciences, Faculty of Science, Yarmouk University, Irbid, 21163 Jordan
| | - Riyadh Muhaidat
- Department of Biological Sciences, Faculty of Science, Yarmouk University, Irbid, 21163 Jordan
| | - Sanaa Alahmed
- Department of Biological Sciences, Faculty of Science, Yarmouk University, Irbid, 21163 Jordan
| | - Mazhar S. Al Zoubi
- Department of Basic Medical Sciences, Faculty of Medicine, Yarmouk University, Irbid, Jordan
| | - Khalid M. Al-Batayneh
- Department of Biological Sciences, Faculty of Science, Yarmouk University, Irbid, 21163 Jordan
| | - Ahmad El-Oqlah
- Department of Biology, Faculty of Science, Jerash University, Jerash, Jordan
| | - Mohammad Abo Gamar
- Department of Biological Sciences, Faculty of Science, Yarmouk University, Irbid, 21163 Jordan
| | - Emad Hussein
- Department of Biological Sciences, Faculty of Science, Yarmouk University, Irbid, 21163 Jordan
- Department of Food Science and Human Nutrition, A’Sharqiyah University, Ibra, Oman
| | - Alaa A. Aljabali
- Department of Pharmaceutical Sciences, Faculty of Pharmacy, Yarmouk University, Irbid, Jordan
| | - Almuthanna K. Alkaraki
- Department of Biological Sciences, Faculty of Science, Yarmouk University, Irbid, 21163 Jordan
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Genome-wide identification of internal reference genes for normalization of gene expression values during endosperm development in wheat. J Appl Genet 2019; 60:233-241. [PMID: 31297694 DOI: 10.1007/s13353-019-00503-0] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/22/2019] [Revised: 06/04/2019] [Accepted: 06/30/2019] [Indexed: 12/13/2022]
Abstract
Internal reference genes that are stably expressed are essential for normalization in comparative expression analyses. However, gene expression varies significantly among species, organisms, tissues, developmental stages, stresses, and treatments. Therefore, identification of stably expressed reference genes in developmental endosperm of bread wheat is important for expression analysis of endosperm genes. As the first study to systematically screen for reference genes across different developmental stages of wheat endosperm, nine genes were selected from among 76 relatively stable genes based on high-throughput RNA sequencing data. The expression stability of these candidate genes and five traditional reference genes was assessed by real-time quantitative PCR combined with three independent algorithms: geNorm, NormFinder, and BestKeeper. The results showed that ATG8d was the most stable gene during wheat endosperm development, followed by Ta54227, while the housekeeping gene GAPDH, commonly used as an internal reference, was the least stable. ATG8d and Ta54227 together formed the optimal combination of reference genes. Comparative expression analysis of glutenin genes indicated that credible quantification could be achieved by normalization against ATG8d in developmental endosperm. The stably expressed gene characterized here can act as a proper internal reference for expression analysis of wheat endosperm genes, especially nutrient- and nutrient synthesis-related genes.
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Venske E, dos Santos RS, Busanello C, Gustafson P, Costa de Oliveira A. Bread wheat: a role model for plant domestication and breeding. Hereditas 2019; 156:16. [PMID: 31160891 PMCID: PMC6542105 DOI: 10.1186/s41065-019-0093-9] [Citation(s) in RCA: 40] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/13/2018] [Accepted: 05/20/2019] [Indexed: 11/30/2022] Open
Abstract
BACKGROUND Bread wheat is one of the most important crops in the world. Its domestication coincides with the beginning of agriculture and since then, it has been constantly under selection by humans. Its breeding has followed millennia of cultivation, sometimes with unintended selection on adaptive traits, and later by applying intentional but empirical selective pressures. For more than one century, wheat breeding has been based on science, and has been constantly evolving due to on farm agronomy and breeding program improvements. The aim of this work is to briefly review wheat breeding, with emphasis on the current advances. DISCUSSION Improving yield potential, resistance/tolerance to biotic and abiotic stresses, and baking quality, have been priorities for breeding this cereal, however, new objectives are arising, such as biofortification enhancement. The narrow genetic diversity and complexity of its genome have hampered the breeding progress and the application of biotechnology. Old approaches, such as the introgression from relative species, mutagenesis, and hybrid breeding are strongly reappearing, motivated by an accumulation of knowledge and new technologies. A revolution has taken place regarding the use of molecular markers whereby thousands of plants can be routinely genotyped for thousands of loci. After 13 years, the wheat reference genome sequence and annotation has finally been completed, and is currently available to the scientific community. Transgenics, an unusual approach for wheat improvement, still represents a potential tool, however it is being replaced by gene editing, whose technology along with genomic selection, speed breeding, and high-throughput phenotyping make up the most recent frontiers for future wheat improvement. FINAL CONSIDERATION Agriculture and plant breeding are constantly evolving, wheat has played a major role in these processes and will continue through decades to come.
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Affiliation(s)
- Eduardo Venske
- Plant Genomics and Breeding Center, Crop Science Department, Eliseu Maciel College of Agronomy, Federal University of Pelotas, Capão do Leão Campus, Capão do Leão, Rio Grande do Sul 96010-610 Brazil
| | - Railson Schreinert dos Santos
- Plant Genomics and Breeding Center, Crop Science Department, Eliseu Maciel College of Agronomy, Federal University of Pelotas, Capão do Leão Campus, Capão do Leão, Rio Grande do Sul 96010-610 Brazil
| | - Carlos Busanello
- Plant Genomics and Breeding Center, Crop Science Department, Eliseu Maciel College of Agronomy, Federal University of Pelotas, Capão do Leão Campus, Capão do Leão, Rio Grande do Sul 96010-610 Brazil
| | - Perry Gustafson
- Plant Sciences Division, 1–32 Agriculture, University of Missouri, Columbia, MO 65211 USA
| | - Antonio Costa de Oliveira
- Plant Genomics and Breeding Center, Crop Science Department, Eliseu Maciel College of Agronomy, Federal University of Pelotas, Capão do Leão Campus, Capão do Leão, Rio Grande do Sul 96010-610 Brazil
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Reig-Otero Y, Mañes J, Manyes L. Amylase-Trypsin Inhibitors in Wheat and Other Cereals as Potential Activators of the Effects of Nonceliac Gluten Sensitivity. J Med Food 2018; 21:207-214. [PMID: 29315017 DOI: 10.1089/jmf.2017.0018] [Citation(s) in RCA: 24] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022] Open
Abstract
Nonceliac gluten sensitivity (NCGS) is a gluten-related gastrointestinal disorder distinct from celiac disease (CD) and gluten allergy that is not easy to diagnose due to the lack of biomarkers. It is characterized by intestinal symptoms and extraintestinal manifestations with the consumption of gluten-containing foods. In contrast to CD, NCGS patients do not present a genetic predisposition or intestinal villi atrophy. Recent studies question the proinflammatory triggering activity of α-gliadin fraction contained in wheat, since it has been demonstrated that the amylase-trypsin inhibitors (ATIs) exert a strong activating effect on the innate immune response. We aimed to analyze the role of ATIs in the activation of innate immunity and in the development of the symptoms characteristic of NCGS. A systematic literature search was made using databases such as MEDLINE, SciELO, Science Direct, and Scopus, with focus on key words such as "amylase-trypsin inhibitors," "wheat," "gluten," and "celiac." Many studies are available on the structure, inhibition mechanism, and immune system effects of ATIs, mainly focused on IgE-mediated reactions. Recently, with the increase of NCGS interest, has increased the literature on the capacity of ATIs contained in wheat to activate the innate immune system. Literature published to date questions the relationship between activation of the innate immune system and gluten in NCGS. ATIs may have acted as interfering contaminant of gluten and appear as potential activator of innate immunity in NCGS patients. In view of their potential impact, more interventional studies are needed to demonstrate the proinflammatory effect of ATIs.
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Affiliation(s)
- Yolanda Reig-Otero
- Laboratory of Food Chemistry and Toxicology, Faculty of Pharmacy, University of Valencia, Valencia, Spain
| | - Jordi Mañes
- Laboratory of Food Chemistry and Toxicology, Faculty of Pharmacy, University of Valencia, Valencia, Spain
| | - Lara Manyes
- Laboratory of Food Chemistry and Toxicology, Faculty of Pharmacy, University of Valencia, Valencia, Spain
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Rocha DI, Vieira LM, Koehler AD, Otoni WC. Cellular and Morpho-histological Foundations of In Vitro Plant Regeneration. Methods Mol Biol 2018; 1815:47-68. [PMID: 29981113 DOI: 10.1007/978-1-4939-8594-4_3] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
Abstract
In vitro plant regeneration systems have turned into invaluable tools to plant biotechnology. Despite being poorly understood, the molecular mechanisms underlying the control of both morphogenetic pathways, de novo organogenesis and somatic embryogenesis, have been supported by recent findings involving proteome-, metabolome-, and transcriptome-based profiles. Notwithstanding, the integration of molecular data with structural aspects has been an important strategy of study attempting to elucidate the basis of the cell competence acquisition to further follow commitment and determination to specific a particular in vitro regeneration pathway. In that sense, morpho-histological tools have allowed to recognize cellular markers and patterns of gene expression at cellular level and this way have collaborated in the identification of the cell types with high regenerative capacity. This chapter ties together up those fundamental and important microscopy techniques that help to elucidate that regeneration occurs, most of the time, from epidermis or subepidermal cells and from the procambial cells (pericycle and vascular parenchyma). Important findings are discussed toward ultrastructural differences observed in the nuclear organization among pluripotent and totipotent cells, implying that regeneration occurs from two cellular mechanisms based on cellular reprogramming or reactivation.
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Affiliation(s)
- Diego Ismael Rocha
- Instituto de Biociências, Universidade Federal de Goiás, Jataí, GO, Brazil
| | - Lorena Melo Vieira
- Laboratório de Cultura de Tecidos-LCT, Instituto de Biotecnologia Aplicada à Agropecuária-BIOAGRO/Departamento de Biologia Vegetal, Campus Universitário, Universidade Federal de Viçosa, Viçosa, MG, Brazil
| | - Andréa Dias Koehler
- Laboratório de Cultura de Tecidos-LCT, Instituto de Biotecnologia Aplicada à Agropecuária-BIOAGRO/Departamento de Biologia Vegetal, Campus Universitário, Universidade Federal de Viçosa, Viçosa, MG, Brazil
| | - Wagner Campos Otoni
- Laboratório de Cultura de Tecidos-LCT, Instituto de Biotecnologia Aplicada à Agropecuária-BIOAGRO/Departamento de Biologia Vegetal, Campus Universitário, Universidade Federal de Viçosa, Viçosa, MG, Brazil.
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An in planta biolistic method for stable wheat transformation. Sci Rep 2017; 7:11443. [PMID: 28904403 PMCID: PMC5597576 DOI: 10.1038/s41598-017-11936-0] [Citation(s) in RCA: 53] [Impact Index Per Article: 7.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/28/2017] [Accepted: 08/31/2017] [Indexed: 11/23/2022] Open
Abstract
The currently favoured method for wheat (Triticum aestivum L.) transformation is inapplicable to many elite cultivars because it requires callus culture and regeneration. Here, we developed a simple, reproducible, in planta wheat transformation method using biolistic DNA delivery without callus culture or regeneration. Shoot apical meristems (SAMs) grown from dry imbibed seeds were exposed under a microscope and subjected to bombardment with different-sized gold particles coated with the GFP gene construct, introducing DNA into the L2 cell layer. Bombarded embryos were grown to mature, stably transformed T0 plants and integration of the GFP gene into the genome was determined at the fifth leaf. Use of 0.6-µm particles and 1350-psi pressure resulted in dramatically increased maximum ratios of transient GFP expression in SAMs and transgene integration in the fifth leaf. The transgene was integrated into the germ cells of 62% of transformants, and was therefore inherited in the next generation. We successfully transformed the model wheat cultivar ‘Fielder’, as well as the recalcitrant Japanese elite cultivar ‘Haruyokoi’. Our method could potentially be used to generate stable transgenic lines for a wide range of commercial wheat cultivars.
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Al Khateeb W, Al Shalabi A, Schroeder D, Musallam I. Phenotypic and molecular variation in drought tolerance of Jordanian durum wheat ( Triticum durum Desf.) landraces. PHYSIOLOGY AND MOLECULAR BIOLOGY OF PLANTS : AN INTERNATIONAL JOURNAL OF FUNCTIONAL PLANT BIOLOGY 2017; 23:311-319. [PMID: 28461720 PMCID: PMC5391366 DOI: 10.1007/s12298-017-0434-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/25/2016] [Revised: 03/06/2017] [Accepted: 03/16/2017] [Indexed: 05/04/2023]
Abstract
Drought is considered one of the major constraints of plant growth and productivity worldwide. Plants respond to drought through different mechanisms including physiological, biochemical, and gene expression modulation. Studying these mechanisms will provide better understanding of drought response mechanisms and will help breeders in developing new cultivars. In this study, growth, biochemical, and molecular responses of four wheat (Triticum durum Desf.) landraces to drought stress (300 mM mannitol) were investigated at the seedling stage. Reverse transcription-polymerase chain reaction was used to assess gene expression level for a drought stress responsive gene (DHN15.1). Germination percentage, shoot length, root length, and root number for all T. durum landraces were decreased significantly under drought stress. However, drought stress caused an increase in proline content, lipid peroxidation level, and DHN15.1 transcript level. According to the studied traits, the Karak landrace showed long shoots (48% relative to its control), the longest roots (45% relative to its control) and the highest proline content (483% relative to its control). The results indicate that from the landraces studied, Karak may be selected as the most tolerant wheat landrace and may help in wheat breeding programs for adaptation to drought-prone environments.
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Affiliation(s)
- Wesam Al Khateeb
- Department of Biological Sciences, Yarmouk University, Irbid, Jordan
| | - Ala’a Al Shalabi
- Department of Biological Sciences, Yarmouk University, Irbid, Jordan
| | - Dana Schroeder
- Department of Biological Sciences, University of Manitoba, Winnipeg, Canada
| | - Iyad Musallam
- Biodiversity and Medicinal Plants Department, National Center for Agricultural Research and Extension, Amman, Jordan
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Fang J, Zhu X, Wang C, Shangguan L. Applications of DNA Technologies in Agriculture. Curr Genomics 2016; 17:379-86. [PMID: 27499686 PMCID: PMC4955036 DOI: 10.2174/1389202917666160331203224] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/27/2015] [Revised: 09/22/2015] [Accepted: 09/29/2015] [Indexed: 11/22/2022] Open
Abstract
With the development of molecular biology, some DNA-based technologies have showed great potentiality in promoting the efficiency of crop breeding program, protecting germplasm resources, improving the quality and outputs of agricultural products, and protecting the eco-environment etc., making their roles in modern agriculture more and more important. To better understand the application of DNA technologies in agriculture, and achieve the goals to promote their utilities in modern agriculture, this paper describes, in some different way, the applications of molecular markers, transgenic engineering and gene's information in agriculture. Some corresponding anticipations for their development prospects are also made.
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Affiliation(s)
- Jinggui Fang
- College of Horticulture, Nanjing Agricultural University, Nanjing,P.R. China
| | - Xudong Zhu
- College of Horticulture, Nanjing Agricultural University, Nanjing,P.R. China
| | - Chen Wang
- College of Horticulture, Nanjing Agricultural University, Nanjing,P.R. China
| | - Lingfei Shangguan
- College of Horticulture, Nanjing Agricultural University, Nanjing,P.R. China
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Shavrukov Y, Baho M, Lopato S, Langridge P. The TaDREB3 transgene transferred by conventional crossings to different genetic backgrounds of bread wheat improves drought tolerance. PLANT BIOTECHNOLOGY JOURNAL 2016; 14:313-22. [PMID: 25940960 DOI: 10.1111/pbi.12385] [Citation(s) in RCA: 45] [Impact Index Per Article: 5.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/13/2015] [Revised: 03/20/2015] [Accepted: 03/20/2015] [Indexed: 05/03/2023]
Abstract
Drought tolerance of the wheat cultivar Bobwhite was previously enhanced by transformation with a construct containing the wheat DREB3 gene driven by the stress-inducible maize Rab17 promoter. Progeny of a single T2 transgenic line were used as pollinators in crosses with four elite bread wheat cultivars from Western Australia: Bonnie Rock, IGW-2971, Magenta and Wyalkatchem, with the aim of evaluating transgene performance in different genetic backgrounds. The selected pollinator line, BW8-9-10-3, contained multiple transgene copies, had significantly improved drought tolerance compared with wild-type plants and showed no growth and development penalties or abnormalities. A single hybrid plant was selected from each cross-combination for three rounds of backcrossing with the corresponding maternal wheat cultivar. The transgene was detected in all four F1 BC3 combinations, but stress-inducible transgene expression was found in only three of the four combinations. Under well-watered conditions, the phenotypes and grain yield components of the F2 BC3 transgene-expressing lines were similar to those of corresponding recurrent parents and null-segregants. Under severe drought conditions, the backcross lines demonstrated 12-18% higher survival rates than the corresponding control plants. Two from four F3 BC3 transgenic lines showed significantly higher yield (18.9% and 21.5%) than control plants under limited water conditions. There was no induction of transgene expression under cold stress, and therefore, no improvement of frost tolerance observed in the progenies of drought-tolerant F3 BC3 lines.
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Affiliation(s)
- Yuri Shavrukov
- Australian Centre for Plant Functional Genomics, University of Adelaide, Urrbrae, SA, 5064, Australia
| | - Manahil Baho
- Australian Centre for Plant Functional Genomics, University of Adelaide, Urrbrae, SA, 5064, Australia
| | - Sergiy Lopato
- Australian Centre for Plant Functional Genomics, University of Adelaide, Urrbrae, SA, 5064, Australia
| | - Peter Langridge
- Australian Centre for Plant Functional Genomics, University of Adelaide, Urrbrae, SA, 5064, Australia
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Zhu Q, Song Y, Zhang G, Ju L, Zhang J, Yu Y, Niu N, Wang J, Ma S. De Novo Assembly and Transcriptome Analysis of Wheat with Male Sterility Induced by the Chemical Hybridizing Agent SQ-1. PLoS One 2015; 10:e0123556. [PMID: 25898130 PMCID: PMC4405499 DOI: 10.1371/journal.pone.0123556] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/23/2014] [Accepted: 03/05/2015] [Indexed: 12/16/2022] Open
Abstract
Wheat (Triticum aestivum L.), one of the world's most important food crops, is a strictly autogamous (self-pollinating) species with exclusively perfect flowers. Male sterility induced by chemical hybridizing agents has increasingly attracted attention as a tool for hybrid seed production in wheat; however, the molecular mechanisms of male sterility induced by the agent SQ-1 remain poorly understood due to limited whole transcriptome data. Therefore, a comparative analysis of wheat anther transcriptomes for male fertile wheat and SQ-1-induced male sterile wheat was carried out using next-generation sequencing technology. In all, 42,634,123 sequence reads were generated and were assembled into 82,356 high-quality unigenes with an average length of 724 bp. Of these, 1,088 unigenes were significantly differentially expressed in the fertile and sterile wheat anthers, including 643 up-regulated unigenes and 445 down-regulated unigenes. The differentially expressed unigenes with functional annotations were mapped onto 60 pathways using the Kyoto Encyclopedia of Genes and Genomes database. They were mainly involved in coding for the components of ribosomes, photosynthesis, respiration, purine and pyrimidine metabolism, amino acid metabolism, glutathione metabolism, RNA transport and signal transduction, reactive oxygen species metabolism, mRNA surveillance pathways, protein processing in the endoplasmic reticulum, protein export, and ubiquitin-mediated proteolysis. This study is the first to provide a systematic overview comparing wheat anther transcriptomes of male fertile wheat with those of SQ-1-induced male sterile wheat and is a valuable source of data for future research in SQ-1-induced wheat male sterility.
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Affiliation(s)
- Qidi Zhu
- National Yangling Agricultural Biotechnology & Breeding Center, Yangling Branch of State Wheat Improvement Centre, Wheat Breeding Engineering Research Center, Ministry of Education, Key Laboratory of Crop Heterosis of Shaanxi Province, Northwest A&F University, Yangling, Shaanxi, China
| | - Yulong Song
- National Yangling Agricultural Biotechnology & Breeding Center, Yangling Branch of State Wheat Improvement Centre, Wheat Breeding Engineering Research Center, Ministry of Education, Key Laboratory of Crop Heterosis of Shaanxi Province, Northwest A&F University, Yangling, Shaanxi, China
| | - Gaisheng Zhang
- National Yangling Agricultural Biotechnology & Breeding Center, Yangling Branch of State Wheat Improvement Centre, Wheat Breeding Engineering Research Center, Ministry of Education, Key Laboratory of Crop Heterosis of Shaanxi Province, Northwest A&F University, Yangling, Shaanxi, China
| | - Lan Ju
- National Yangling Agricultural Biotechnology & Breeding Center, Yangling Branch of State Wheat Improvement Centre, Wheat Breeding Engineering Research Center, Ministry of Education, Key Laboratory of Crop Heterosis of Shaanxi Province, Northwest A&F University, Yangling, Shaanxi, China
| | - Jiao Zhang
- National Yangling Agricultural Biotechnology & Breeding Center, Yangling Branch of State Wheat Improvement Centre, Wheat Breeding Engineering Research Center, Ministry of Education, Key Laboratory of Crop Heterosis of Shaanxi Province, Northwest A&F University, Yangling, Shaanxi, China
| | - Yongang Yu
- National Yangling Agricultural Biotechnology & Breeding Center, Yangling Branch of State Wheat Improvement Centre, Wheat Breeding Engineering Research Center, Ministry of Education, Key Laboratory of Crop Heterosis of Shaanxi Province, Northwest A&F University, Yangling, Shaanxi, China
| | - Na Niu
- National Yangling Agricultural Biotechnology & Breeding Center, Yangling Branch of State Wheat Improvement Centre, Wheat Breeding Engineering Research Center, Ministry of Education, Key Laboratory of Crop Heterosis of Shaanxi Province, Northwest A&F University, Yangling, Shaanxi, China
| | - Junwei Wang
- National Yangling Agricultural Biotechnology & Breeding Center, Yangling Branch of State Wheat Improvement Centre, Wheat Breeding Engineering Research Center, Ministry of Education, Key Laboratory of Crop Heterosis of Shaanxi Province, Northwest A&F University, Yangling, Shaanxi, China
| | - Shoucai Ma
- National Yangling Agricultural Biotechnology & Breeding Center, Yangling Branch of State Wheat Improvement Centre, Wheat Breeding Engineering Research Center, Ministry of Education, Key Laboratory of Crop Heterosis of Shaanxi Province, Northwest A&F University, Yangling, Shaanxi, China
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14
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Delporte F, Pretova A, du Jardin P, Watillon B. Morpho-histology and genotype dependence of in vitro morphogenesis in mature embryo cultures of wheat. PROTOPLASMA 2014; 251:1455-70. [PMID: 24763701 PMCID: PMC4209243 DOI: 10.1007/s00709-014-0647-7] [Citation(s) in RCA: 27] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/02/2013] [Accepted: 04/08/2014] [Indexed: 05/08/2023]
Abstract
Cellular totipotency is one of the basic principles of plant biotechnology. Currently, the success of the procedure used to produce transgenic plants is directly proportional to the successful insertion of foreign DNA into the genome of suitable target tissue/cells that are able to regenerate plants. The mature embryo (ME) is increasingly recognized as a valuable explant for developing regenerable cell lines in wheat biotechnology. We have previously developed a regeneration procedure based on fragmented ME in vitro culture. Before we can use this regeneration system as a model for molecular studies of the morphogenic pathway induced in vitro and investigate the functional links between regenerative capacity and transformation receptiveness, some questions need to be answered. Plant regeneration from cultured tissues is genetically controlled. Factors such as age/degree of differentiation and physiological conditions affect the response of explants to culture conditions. Plant regeneration in culture can be achieved through embryogenesis or organogenesis. In this paper, the suitability of ME tissues for tissue culture and the chronological series of morphological data observed at the macroscopic level are documented. Genetic variability at each step of the regeneration process was evaluated through a varietal comparison of several elite wheat cultivars. A detailed histological analysis of the chronological sequence of morphological events during ontogeny was conducted. Compared with cultures of immature zygotic embryos, we found that the embryogenic pathway occurs slightly earlier and is of a different origin in our model. Cytological, physiological, and some biochemical aspects of somatic embryo formation in wheat ME culture are discussed.
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Affiliation(s)
- Fabienne Delporte
- Department of Life Sciences, Bioengineering Unit, Walloon Agricultural Research Centre (CRA-W), Chaussée de Charleroi 234, 5030 Gembloux, Belgium
| | - Anna Pretova
- Institute of Plant Genetics and Biotechnology, Slovak Academy of Sciences, Akademicka 2, P.O. Box 39 A, 950 07 Nitra, Slovakia
- Department of Biology- Faculty of Natural Sciences, University of SS Cyril and Methodius in Trnava, Nám. J. Herdu 2, SK 917 01 Trnava, Slovak Republic
| | - Patrick du Jardin
- Gembloux Agro-Bio Tech, Plant Biology Unit, University of Liège (ULg), Passage des Déportés, 2, 5030 Gembloux, Belgium
| | - Bernard Watillon
- Department of Life Sciences, Bioengineering Unit, Walloon Agricultural Research Centre (CRA-W), Chaussée de Charleroi 234, 5030 Gembloux, Belgium
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15
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Abstract
Since its first invention in the late 1980s the particle gun has evolved from a basic gunpowder driven machine firing tungsten particles to one more refined which uses helium gas as the propellant to launch alternative heavy metal particles such as gold and silver. The simple principle is that DNA-coated microscopic particles (microcarriers) are accelerated at high speed by helium gas within a vacuum and travel at such a velocity as to penetrate target cells. However, the process itself involves a range of parameters which are open to variation: microparticle type and size, gun settings (rupture pressure, target distance, vacuum drawn, etc.), preparation of components (e.g., gold coating), and preparation of plant tissues. Here is presented a method optimized for transformation of wheat immature embryos using the Bio-Rad PDS-1000/He particle gun to deliver gold particles coated with a gene of interest and the selectable marker gene bar at 650 psi rupture pressure. Following bombardment, various tissue culture phases are used to encourage embryogenic callus formation and regeneration of plantlets and subsequent selection using glufosinate ammonium causes suppression of non-transformed tissues, thus assisting the detection of transformed plants. This protocol has been used successfully to generate transgenic plants for a wide range of wheat varieties, both spring and winter bread wheats (T. aestivum L.) and durum wheats (T. turgidum L.).
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16
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Sparks CA, Doherty A, Jones HD. Genetic transformation of wheat via Agrobacterium-mediated DNA delivery. Methods Mol Biol 2014; 1099:235-250. [PMID: 24243208 DOI: 10.1007/978-1-62703-715-0_19] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/02/2023]
Abstract
The method described involves an initial incubation of wheat immature embryos in a liquid culture of Agrobacterium tumefaciens. The Agrobacterium strain is engineered to contain a binary vector with a gene of interest and a selectable marker gene placed between the T-DNA borders; the T-DNA is the region transferred to the plant cells, thus harnessing the bacterium's natural ability to deliver specific DNA into host cells. Following the initial inoculation with the Agrobacterium, the embryos are co-cultivated for several days after which the Agrobacterium is selectively destroyed using an antibiotic. Tissue culture of the embryos on plant media with a correct balance of hormones allows embryogenic callus formation followed by regeneration of plantlets, and in the later stages of tissue culture a selectable marker (herbicide) is included to minimize the incidence of non-transformed plants. This protocol has been used successfully to generate transformed plants of a wide range of wheat varieties, both spring and winter bread wheats (T. aestivum L.) and durum wheats (T. turgidum L.).
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Affiliation(s)
- Caroline A Sparks
- Plant Biology and Crop Science Department, Rothamsted Research, Harpenden, Hertfordshire, UK
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17
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Kempe K, Rubtsova M, Riewe D, Gils M. The production of male-sterile wheat plants through split barnase expression is promoted by the insertion of introns and flexible peptide linkers. Transgenic Res 2013; 22:1089-105. [PMID: 23720222 DOI: 10.1007/s11248-013-9714-7] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/31/2013] [Accepted: 05/02/2013] [Indexed: 10/26/2022]
Abstract
The successful use of transgenic plants depends on the strong and stable expression of the heterologous genes. In this study, three introns (PSK7-i1 and PSK7-i3 from Petunia and UBQ10-i1 from Arabidopsis) were tested for their ability to enhance the tapetum-specific expression of a split barnase transgene. We also analyzed the effects of introducing multiple copies of flexible peptide linkers that bridged the fusion domains of the assembled protein. The barnase fragments were assembled into a functional cytotoxin via intein-mediated trans-splicing, thus leading to male sterility through pollen ablation. A total of 14 constructs carrying different combinations of introns and peptide linkers were transformed into wheat plants. The resulting populations (between 41 and 301 independent plants for each construct) were assayed for trait formation. Depending on which construct was used, there was an increase of up to fivefold in the proportion of plants exhibiting male sterility compared to the populations harboring unmodified constructs. Furthermore, the average barnase copy number in the plants displaying male sterility could be reduced. The metabolic profiles of male-sterile transgenic plants and non-transgenic plants were compared using gas chromatography-mass spectrometry. The profiles generated from leaf tissues displayed no differences, thus corroborating the anther specificity of barnase expression. The technical advances achieved in this study may be a valuable contribution for future improvement of transgenic crop systems.
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Affiliation(s)
- Katja Kempe
- Leibniz Institute of Plant Genetics and Crop Plant Research (IPK), Corrensstraße 3, 06466, Stadt Seeland, Gatersleben, OT, Germany
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18
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IMAI S, TANAKA K, NISHITSUJI Y, KIKUCHI Y, MATSUOKA Y, ARAMI SI, SATO M, HARAGUCHI H, KURIMOTO Y, MANO J, FURUI S, KITTA K. An Endogenous Reference Gene of Common and Durum Wheat for Detection of Genetically Modified Wheat. Food Hygiene and Safety Science (Shokuhin Eiseigaku Zasshi) 2012; 53:203-10. [DOI: 10.3358/shokueishi.53.203] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
Affiliation(s)
- Shinjiro IMAI
- Quality Assurance Division, Research Center for Basic Science Research and Development, Nisshin Seifun Group Inc
| | - Keiko TANAKA
- Quality Assurance Division, Research Center for Basic Science Research and Development, Nisshin Seifun Group Inc
| | - Yasuyuki NISHITSUJI
- Quality Assurance Division, Research Center for Basic Science Research and Development, Nisshin Seifun Group Inc
| | - Yosuke KIKUCHI
- Quality Assurance Division, Research Center for Basic Science Research and Development, Nisshin Seifun Group Inc
| | | | | | - Megumi SATO
- Central Laboratory, Nippon Flour Mills Co., Ltd
| | | | | | - Junichi MANO
- National Agriculture and Food Research Organization, National Food Research Institute
| | - Satoshi FURUI
- National Agriculture and Food Research Organization, National Food Research Institute
| | - Kazumi KITTA
- National Agriculture and Food Research Organization, National Food Research Institute
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19
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Egorov TA, Odintsova TI. [Defense peptides of plant immune system]. RUSSIAN JOURNAL OF BIOORGANIC CHEMISTRY 2012; 38:7-17. [PMID: 22792701 DOI: 10.1134/s1068162012010062] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
Abstract
Antimicrobial peptides (AMPs) are natural antibiotics produced by all living organisms to combat pathogens. They are important effector molecules of the immune system both in animals and plants. AMPs are diverse in structure and mode of action. Based on homology of amino acid sequences and 3D structures several AMP families have been distinguished. They are defensins, thionins, lipid transfer proteins, hevein- and knottin-like peptides, and cyclotides. AMPs display broad-spectrum antimicrobial activity and thus show promise for the development of disease- resistant crops by genetic engineering and for the production of new-generation drugs. In this paper, the properties of the main AMP families (defensins and hevein-like peptides) and of a new 4-Cys plant AMP family are reviewed.
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20
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Parmar SS, Sainger M, Chaudhary D, Jaiwal PK. Plant regeneration from mature embryo of commercial Indian bread wheat (Triticum aestivum L.) cultivars. PHYSIOLOGY AND MOLECULAR BIOLOGY OF PLANTS : AN INTERNATIONAL JOURNAL OF FUNCTIONAL PLANT BIOLOGY 2012; 18:177-83. [PMID: 23573055 PMCID: PMC3550503 DOI: 10.1007/s12298-012-0101-2] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/23/2023]
Abstract
A simple, efficient, reproducible and comparatively genotype-independent in vitro plant regeneration protocol was developed for ten commercial Indian bread wheat cultivars using mature embryos as the explants. Three different auxins and five different combinations of growth regulators in a modified Murashige and Skoog's basal medium were assessed for their effect on callus induction and plant regeneration, respectively, in a high yielding and widely grown cultivar, PBW-343. The optimized conditions were further evaluated with nine other commercial cultivars. A simple novel approach of physical isolation of regenerable calli from non regenerable structures during the early callus phase was used to improve plant regeneration. Callus induced on 2.0 mg(-1) 2,4-dichlorophenoxyacetic acid (2,4-D) showed a regeneration frequency of 86 % with 7.5 shoots per explants on hormone-free medium. A considerable improvement in the regeneration frequency (up to 97 %) and the average of shoots (19 shoots per explants) was obtained with a combination of thidiazuron (TDZ) and 2,4-D.
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Affiliation(s)
| | - Manish Sainger
- Centre for Biotechnology, M. D. University, Rohtak, 124001 India
| | | | - Pawan K. Jaiwal
- Centre for Biotechnology, M. D. University, Rohtak, 124001 India
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21
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Xia L, Ma Y, He Y, Jones HD. GM wheat development in China: current status and challenges to commercialization. JOURNAL OF EXPERIMENTAL BOTANY 2012; 63:1785-90. [PMID: 22174439 DOI: 10.1093/jxb/err342] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/10/2023]
Abstract
Genetic modification facilitates research into fundamental questions of plant functional genomics and provides a route for developing novel commercial varieties. In 2008, significant financial resources were supplied by the Chinese government for research and development (R&D) into genetic modification of the major crop species. This project was aimed at providing an opportunity for crop improvement while accentuating the development of a safe, precise, and effective wheat genetic transformation system suitable for commercialization. The focus here is on one of the key crops included in this project, wheat, to provide an insight into the main transformation methods currently in use, the target traits of major importance, and the successful applications of wheat genetic improvement in China. Furthermore, the biosafety and regulatory issues of major concern and the strategies to produce 'clean' transgenic wheat plants will also be discussed. This commentary is intended to be a helpful insight into the production and commercialization of transgenic wheat in China and to put these activities into a global context.
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Affiliation(s)
- Lanqin Xia
- Chinese Academy of Agricultural Sciences, Beijing, China
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22
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Tamás-Nyitrai C, Jones HD, Tamás L. Biolistic- and Agrobacterium-mediated transformation protocols for wheat. Methods Mol Biol 2012; 877:357-384. [PMID: 22610641 DOI: 10.1007/978-1-61779-818-4_27] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/01/2023]
Abstract
After rice, wheat is considered to be the most important world food crop, and the demand for high-quality wheat flour is increasing. Although there are no GM varieties currently grown, wheat is an important target for biotechnology, and we anticipate that GM wheat will be commercially available in 10-15 years. In this chapter, we summarize the main features and challenges of wheat transformation and then describe detailed protocols for the production of transgenic wheat plants both by biolistic and Agrobacterium-mediated DNA-delivery. Although these methods are used mainly for bread wheat (Triticum aestivum L.), they can also be successfully applied, with slight modifications, to tetraploid durum wheat (T. turgidum L. var. durum). The appropriate size and developmental stage of explants (immature embryo-derived scutella), the conditions to produce embryogenic callus tissues, and the methods to regenerate transgenic plants under increasing selection pressure are provided in the protocol. To illustrate the application of herbicide selection system, we have chosen to describe the use of the plasmid pAHC25 for biolistic transformation, while for Agrobacterium-mediated transformation the binary vector pAL156 (incorporating both the bar gene and the uidA gene) has been chosen. Beside the step-by-step methodology for obtaining stably transformed and normal fertile plants, procedures for screening and testing transgenic wheat plants are also discussed.
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Affiliation(s)
- Cecília Tamás-Nyitrai
- Centre for Agricultural Research, Hungarina Academy of Sciences, Martonvásár, Hungary
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23
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Choi HW, Yu XH, Lemaux PG, Cho MJ. Stability and inheritance of endosperm-specific expression of two transgenes in progeny from crossing independently transformed barley plants. PLANT CELL REPORTS 2009; 28:1265-1272. [PMID: 19529943 PMCID: PMC2717377 DOI: 10.1007/s00299-009-0726-y] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 01/15/2009] [Revised: 05/11/2009] [Accepted: 05/27/2009] [Indexed: 05/27/2023]
Abstract
To study stability and inheritance of two different transgenes in barley, we crossed a homozygous T(8) plant, having uidA (or gus) driven by the barley endosperm-specific B(1)-hordein promoter (localized in the near centromeric region of chromosome 7H) with a second homozygous T(4) plant, having sgfp(S65T) driven by the barley endosperm-specific D-hordein promoter (localized on the subtelomeric region of chromosome 2H). Both lines stably expressed the two transgenes in the generations prior to the cross. Three independently crossed F(1) progeny were analyzed by PCR for both uidA and sgfp(S65T) in each plant and functional expression of GUS and GFP in F(2) seeds followed a 3:1 Mendelian segregation ratio and transgenes were localized by FISH to the same location as in the parental plants. FISH was used to screen F(2) plants for homozygosity of both transgenes; four homozygous plants were identified from the two crossed lines tested. FISH results showing presence of transgenes were consistent with segregation ratios of expression of both transgenes, indicating that the two transgenes were expressed without transgene silencing in homozygous progeny advanced to the F(3) and F(4) generations. Thus, even after crossing independently transformed, homozygous parental plants containing a single, stably expressed transgene, progeny were obtained that continued to express multiple transgenes through generation advance. Such stability of transgenes, following outcrossing, is an important attribute for trait modification and for gene flow studies.
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Affiliation(s)
- Hae-Woon Choi
- Department of Plant and Microbial Biology, University of California, Berkeley, CA 94720 USA
- School of Bioscience and Biotechnology, Chungnam National University, Daejeon, 305-764 Korea
| | - Xiao-Hong Yu
- Department of Plant and Microbial Biology, University of California, Berkeley, CA 94720 USA
- Biology Department, Brookhaven National Laboratory, 50 Bell Avenue, Upton, NY 11973 USA
| | - Peggy G. Lemaux
- Department of Plant and Microbial Biology, University of California, Berkeley, CA 94720 USA
| | - Myeong-Je Cho
- Department of Plant and Microbial Biology, University of California, Berkeley, CA 94720 USA
- RWC Research Campus, Pioneer Hi-Bred International, Inc., 700A Bay Road, Redwood City, CA 94063 USA
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24
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Tamás C, Kisgyörgy BN, Rakszegi M, Wilkinson MD, Yang MS, Láng L, Tamás L, Bedo Z. Transgenic approach to improve wheat (Triticum aestivum L.) nutritional quality. PLANT CELL REPORTS 2009; 28:1085-94. [PMID: 19466426 DOI: 10.1007/s00299-009-0716-0] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/15/2008] [Revised: 04/09/2009] [Accepted: 05/08/2009] [Indexed: 05/15/2023]
Abstract
An amaranth (Amaranthus hypochondriacus) albumin gene, encoding the 35-kDa AmA1 protein of the seed, with a high content of essential amino acids, was used in the biolistic transformation of bread wheat (Triticum aestivum L.) variety Cadenza. The transformation cassette carried the ama1 gene under the control of a powerful wheat endosperm-specific promoter (1Bx17 HMW-GS). Southern-blot analysis of T(1) lines confirmed the integration of the foreign gene, while RT-PCR and Western-blot analyses of the samples confirmed the transcription and translation of the transgene. The effects of the extra albumin protein on the properties of flour, produced from bulked T(2) seeds, were calculated using total protein and essential amino acid content analysis, polymeric/monomeric protein and HMW/LMW glutenin subunit ratio measurements. The results indicated that not only can essential amino acid content be increased, but some parameters associated with functional quality may also be improved because of the expression of the AmA1 protein.
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Affiliation(s)
- Cecília Tamás
- Agricultural Research Institute of the Hungarian Academy of Sciences, 2462, Martonvásár, Hungary
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25
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Transcriptome pathways unique to dehydration tolerant relatives of modern wheat. Funct Integr Genomics 2009; 9:377-96. [PMID: 19330365 DOI: 10.1007/s10142-009-0123-1] [Citation(s) in RCA: 89] [Impact Index Per Article: 5.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/28/2008] [Revised: 03/10/2009] [Accepted: 03/11/2009] [Indexed: 12/11/2022]
Abstract
Among abiotic stressors, drought is a major factor responsible for dramatic yield loss in agriculture. In order to reveal differences in global expression profiles of drought tolerant and sensitive wild emmer wheat genotypes, a previously deployed shock-like dehydration process was utilized to compare transcriptomes at two time points in root and leaf tissues using the Affymetrix GeneChip(R) Wheat Genome Array hybridization. The comparison of transcriptomes reveal several unique genes or expression patterns such as differential usage of IP(3)-dependent signal transduction pathways, ethylene- and abscisic acid (ABA)-dependent signaling, and preferential or faster induction of ABA-dependent transcription factors by the tolerant genotype that distinguish contrasting genotypes indicative of distinctive stress response pathways. The data also show that wild emmer wheat is capable of engaging known drought stress responsive mechanisms. The global comparison of transcriptomes in the absence of and after dehydration underlined the gene networks especially in root tissues that may have been lost in the selection processes generating modern bread wheats.
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26
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Ergen NZ, Budak H. Sequencing over 13 000 expressed sequence tags from six subtractive cDNA libraries of wild and modern wheats following slow drought stress. PLANT, CELL & ENVIRONMENT 2009; 32:220-36. [PMID: 19054353 DOI: 10.1111/j.1365-3040.2008.01915.x] [Citation(s) in RCA: 48] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/24/2023]
Abstract
A deeper understanding of the drought response and genetic improvement of the cultivated crops for better tolerance requires attention because of the complexity of the drought response syndrome and the loss of genetic diversity during domestication. We initially screened about 200 wild emmer wheat genotypes and then focused on 26 of these lines, which led to the selection of two genotypes with contrasting responses to water deficiency. Six subtractive cDNA libraries were constructed, and over 13 000 expressed sequence tags (ESTs) were sequenced using leaf and root tissues of wild emmer wheat genotypes TR39477 (tolerant) and TTD-22 (sensitive), and modern wheat variety Kiziltan drought stressed for 7 d. Clustering and assembly of ESTs resulted in 2376 unique sequences (1159 without hypothetical proteins and no hits), 75% of which were represented only once. At this level of EST sampling, each tissue shared a very low percentage of transcripts (13-26%). The data obtained indicated that the genotypes shared common elements of drought stress as well as distinctly differential expression patterns that might be illustrative of their contrasting ability to tolerate water deficiencies. The new EST data generated here provide a highly diverse and rich source for gene discovery in wheat and other grasses.
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Affiliation(s)
- Neslihan Z Ergen
- Faculty of Engineering and Natural Sciences, Sabanci University, Tuzla 34956, Turkey
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27
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Vasil IK. A history of plant biotechnology: from the Cell Theory of Schleiden and Schwann to biotech crops. PLANT CELL REPORTS 2008; 27:1423-40. [PMID: 18612644 DOI: 10.1007/s00299-008-0571-4] [Citation(s) in RCA: 46] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/31/2008] [Revised: 05/28/2008] [Accepted: 06/10/2008] [Indexed: 05/21/2023]
Abstract
Plant biotechnology is founded on the principles of cellular totipotency and genetic transformation, which can be traced back to the Cell Theory of Matthias Jakob Schleiden and Theodor Schwann, and the discovery of genetic transformation in bacteria by Frederick Griffith, respectively. On the 25th anniversary of the genetic transformation of plants, this review provides a historical account of the evolution of the theoretical concepts and experimental strategies that led to the production and commercialization of biotech (transformed or transgenic) plants expressing many useful genes, and emphasizes the beneficial effects of plant biotechnology on food security, human health, the environment, and conservation of biodiversity. In so doing, it celebrates and pays tribute to the contributions of scores of scientists who laid the foundation of modern plant biotechnology by their bold and unconventional thinking and experimentation. It highlights also the many important lessons to be learnt from the fascinating history of plant biotechnology, the significance of history in science teaching and research, and warns against the danger of the growing trends of ignoring history and historical illiteracy.
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Affiliation(s)
- Indra K Vasil
- University of Florida, Box 110690, Gainesville, FL 32611-0690, USA.
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28
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Barnabás B, Jäger K, Fehér A. The effect of drought and heat stress on reproductive processes in cereals. PLANT, CELL & ENVIRONMENT 2008; 31:11-38. [PMID: 17971069 DOI: 10.1111/j.1365-3040.2007.01727.x] [Citation(s) in RCA: 327] [Impact Index Per Article: 20.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/17/2023]
Abstract
As the result of intensive research and breeding efforts over the last 20 years, the yield potential and yield quality of cereals have been greatly improved. Nowadays, yield safety has gained more importance because of the forecasted climatic changes. Drought and high temperature are especially considered as key stress factors with high potential impact on crop yield. Yield safety can only be improved if future breeding attempts will be based on the valuable new knowledge acquired on the processes determining plant development and its responses to stress. Plant stress responses are very complex. Interactions between plant structure, function and the environment need to be investigated at various phases of plant development at the organismal, cellular as well as molecular levels in order to obtain a full picture. The results achieved so far in this field indicate that various plant organs, in a definite hierarchy and in interaction with each other, are involved in determining crop yield under stress. Here we attempt to summarize the currently available information on cereal reproduction under drought and heat stress and to give an outlook towards potential strategies to improve yield safety in cereals.
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Affiliation(s)
- Beáta Barnabás
- Agricultural Research Institute of the Hungarian Academy of Sciences, Brunszvik 2, H-2462 Martonvásár, Hungary.
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