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Leng F, Zhou G, Shi R, Liu C, Lin Y, Yu X, Zhang Y, He X, Liu Z, Sun M, Bao F, Hu Y, He Y. Development of PEG-mediated genetic transformation and gene editing system of Bryum argenteum as an abiotic stress tolerance model plant. PLANT CELL REPORTS 2024; 43:63. [PMID: 38340191 DOI: 10.1007/s00299-024-03143-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/08/2023] [Accepted: 12/31/2023] [Indexed: 02/12/2024]
Abstract
KEY MESSAGE To establish a sterile culture system and protoplast regeneration system for Bryum argenteum, and to establish and apply CRISPR/Cas9 system in Bryum argenteum. Bryum argenteum is a fascinating, cosmopolitan, and versatile moss species that thrives in various disturbed environments. Because of its comprehensive tolerance to the desiccation, high UV and extreme temperatures, it is emerging as a model moss for studying the molecular mechanisms underlying plant responses to abiotic stresses. However, the lack of basic tools such as gene transformation and targeted genome modification has hindered the understanding of the molecular mechanisms underlying the survival of B. argenteum in different environments. Here, we reported the protonema of B. argenteum can survive up to 95.4% water loss. In addition, the genome size of B. argenteum is approximately 313 Mb by kmer analysis, which is smaller than the previously reported 700 Mb. We also developed a simple method for protonema induction and an efficient protoplast isolation and regeneration protocol for B. argenteum. Furthermore, we established a PEG-mediated protoplast transient transfection and stable transformation system for B. argenteum. Two homologues of ABI3(ABA-INSENSITIVE 3) gene were successfully cloned from B. argenteum. To further investigate the function of the ABI3 gene in B. argenteum, we used the CRISPR/Cas9 genetic editing system to target the BaABI3A and BaABI3B gene in B. argenteum protoplasts. This resulted in mutagenesis at the target in about 2-5% of the regenerated plants. The isolated abi3a and abi3b mutants exhibited increased sensitivity to desiccation, suggesting that BaABI3A and BaABI3B play redundant roles in desiccation stress. Overall, our results provide a rapid and simple approach for molecular genetics in B. argenteum. This study contributes to a better understanding of the molecular mechanisms of plant adaptation to extreme environmental.
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Affiliation(s)
- Fengjun Leng
- Key Laboratory of Plant Gene Resources and Biotechnology for Carbon Reduction and Environmental Improvement, Beijing Municipal Government, and College of Life Sciences, Capital Normal University, Beijing, 100048, China
| | - Guiwei Zhou
- Key Laboratory of Plant Gene Resources and Biotechnology for Carbon Reduction and Environmental Improvement, Beijing Municipal Government, and College of Life Sciences, Capital Normal University, Beijing, 100048, China
| | - Ruoyuan Shi
- Key Laboratory of Plant Gene Resources and Biotechnology for Carbon Reduction and Environmental Improvement, Beijing Municipal Government, and College of Life Sciences, Capital Normal University, Beijing, 100048, China
| | - Chengyang Liu
- Key Laboratory of Plant Gene Resources and Biotechnology for Carbon Reduction and Environmental Improvement, Beijing Municipal Government, and College of Life Sciences, Capital Normal University, Beijing, 100048, China
| | - Yirui Lin
- Key Laboratory of Plant Gene Resources and Biotechnology for Carbon Reduction and Environmental Improvement, Beijing Municipal Government, and College of Life Sciences, Capital Normal University, Beijing, 100048, China
| | - Xinqiang Yu
- Key Laboratory of Plant Gene Resources and Biotechnology for Carbon Reduction and Environmental Improvement, Beijing Municipal Government, and College of Life Sciences, Capital Normal University, Beijing, 100048, China
| | - Yanhua Zhang
- Key Laboratory of Plant Gene Resources and Biotechnology for Carbon Reduction and Environmental Improvement, Beijing Municipal Government, and College of Life Sciences, Capital Normal University, Beijing, 100048, China
| | - Xiangxi He
- Key Laboratory of Plant Gene Resources and Biotechnology for Carbon Reduction and Environmental Improvement, Beijing Municipal Government, and College of Life Sciences, Capital Normal University, Beijing, 100048, China
| | - Zhu Liu
- Key Laboratory of Plant Gene Resources and Biotechnology for Carbon Reduction and Environmental Improvement, Beijing Municipal Government, and College of Life Sciences, Capital Normal University, Beijing, 100048, China
| | - Mingming Sun
- Laboratory for Micro-Sized Functional Materials, College of Elementary Education, Capital Normal University, Beijing, 100048, China
| | - Fang Bao
- Key Laboratory of Plant Gene Resources and Biotechnology for Carbon Reduction and Environmental Improvement, Beijing Municipal Government, and College of Life Sciences, Capital Normal University, Beijing, 100048, China.
| | - Yong Hu
- Key Laboratory of Plant Gene Resources and Biotechnology for Carbon Reduction and Environmental Improvement, Beijing Municipal Government, and College of Life Sciences, Capital Normal University, Beijing, 100048, China.
| | - Yikun He
- Key Laboratory of Plant Gene Resources and Biotechnology for Carbon Reduction and Environmental Improvement, Beijing Municipal Government, and College of Life Sciences, Capital Normal University, Beijing, 100048, China
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Gemal EL, Green TGA, Cary SC, Colesie C. High Resilience and Fast Acclimation Processes Allow the Antarctic Moss Bryum argenteum to Increase Its Carbon Gain in Warmer Growing Conditions. BIOLOGY 2022; 11:biology11121773. [PMID: 36552282 PMCID: PMC9775354 DOI: 10.3390/biology11121773] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/15/2022] [Revised: 12/03/2022] [Accepted: 12/05/2022] [Indexed: 12/12/2022]
Abstract
Climate warming in Antarctica involves major shifts in plant distribution and productivity. This study aims to unravel the plasticity and acclimation potential of Bryum argenteum var. muticum, a cosmopolitan moss species found in Antarctica. By comparing short-term, closed-top chamber warming experiments which mimic heatwaves, with in situ seasonal physiological rates from Cape Hallett, Northern Victoria Land, we provide insights into the general inherent resilience of this important Antarctic moss and into its adaptability to longer-term threats and stressors associated with climate change. Our findings show that B. argenteum can thermally acclimate to mitigate the effects of increased temperature under both seasonal changes and short-term pulse warming events. Following pulse warming, this species dramatically increased its carbon uptake, measured as net photosynthesis, while reductions in carbon losses, measured as dark respiration, were not observed. Rapid growth of new shoots may have confounded the effects on respiration. These results demonstrate the high physiological plasticity of this species, with acclimation occurring within only 7 days. We show that this Antarctic moss species appears to have a high level of resilience and that fast acclimation processes allow it to potentially benefit from both short-term and long-term climatic changes.
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Affiliation(s)
- Emma L. Gemal
- Global Change Research Institute, School of GeoSciences, University of Edinburgh, Edinburgh EH9 3FE, UK
- Department of Physical Geography, Stockholm University, SE-106 91 Stockholm, Sweden
| | - T. G. Allan Green
- International Centre for Terrestrial Antarctic Research, University of Waikato, Hamilton 3240, New Zealand
- Unidad de Botánica, Facultad de Farmacia, Universidad Complutense, E-28040 Madrid, Spain
| | - S. Craig Cary
- International Centre for Terrestrial Antarctic Research, University of Waikato, Hamilton 3240, New Zealand
| | - Claudia Colesie
- Global Change Research Institute, School of GeoSciences, University of Edinburgh, Edinburgh EH9 3FE, UK
- Correspondence:
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Maturana CS, Biersma EM, Díaz A, González-Wevar C, Contador T, Convey P, Jackson JA, Poulin E. Survivors and colonizers: Contrasting biogeographic histories reconciled in the Antarctic freshwater copepod Boeckella poppei. Front Ecol Evol 2022. [DOI: 10.3389/fevo.2022.1012852] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/02/2022] Open
Abstract
Two main hypotheses have been proposed to explain the contemporary distribution of Antarctic terrestrial biota. We assess whether the current distribution of maritime Antarctic populations of the freshwater copepod Boeckella poppei is the result of (1) a post-Last Glacial Maximum (LGM) colonization, or whether (2) the species survived in regional glacial refugia throughout the LGM and earlier glaciations. Using 438 specimens from 34 different sampling sites across Southern South America, South Georgia, South Orkney Islands, South Shetland Islands, and the Antarctic Peninsula, we analyzed mitochondrial and nuclear sequences to uncover patterns of genetic diversity and population structure. We also performed median-joining haplotype network, phylogenetic reconstruction, and divergence time analyses. Finally, we evaluated past demographic changes and historical scenarios using the Approximate Bayesian Computation (ABC) method. Our data support the existence of two clades with different and contrasting biogeographic histories. The first clade has been present in maritime Antarctica since at least the mid-Pleistocene, with the South Orkney Islands the most likely refugial area. The second clade has a broader distribution including southern South America, South Georgia, South Shetland Islands, and the Antarctic Peninsula. The ABC method identified long-distance dispersal (LDD) colonization event(s) from southern South America to South Georgia and the maritime Antarctic after the LGM deglaciation, supporting more recent colonization of Antarctic locations. The current Antarctic and sub-Antarctic distribution of B. poppei is likely derived from two independent biogeographic events. The combination of both (1) post-LGM colonization from southern South America and (2) longer-term persistence in in situ regional refugia throughout glacial periods challenges current understanding of the biogeographic history of Antarctic freshwater biota. Re-colonization of ice-impacted Antarctic areas would have occurred following a LDD and Establishment model, pointing to the existence of possible post-dispersal barriers, despite widely assumed high passive dispersal capacity in freshwater invertebrates.
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Strugnell JM, McGregor HV, Wilson NG, Meredith KT, Chown SL, Lau SCY, Robinson SA, Saunders KM. Emerging biological archives can reveal ecological and climatic change in Antarctica. GLOBAL CHANGE BIOLOGY 2022; 28:6483-6508. [PMID: 35900301 PMCID: PMC9826052 DOI: 10.1111/gcb.16356] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/19/2022] [Accepted: 06/27/2022] [Indexed: 06/15/2023]
Abstract
Anthropogenic climate change is causing observable changes in Antarctica and the Southern Ocean including increased air and ocean temperatures, glacial melt leading to sea-level rise and a reduction in salinity, and changes to freshwater water availability on land. These changes impact local Antarctic ecosystems and the Earth's climate system. The Antarctic has experienced significant past environmental change, including cycles of glaciation over the Quaternary Period (the past ~2.6 million years). Understanding Antarctica's paleoecosystems, and the corresponding paleoenvironments and climates that have shaped them, provides insight into present day ecosystem change, and importantly, helps constrain model projections of future change. Biological archives such as extant moss beds and peat profiles, biological proxies in lake and marine sediments, vertebrate animal colonies, and extant terrestrial and benthic marine invertebrates, complement other Antarctic paleoclimate archives by recording the nature and rate of past ecological change, the paleoenvironmental drivers of that change, and constrain current ecosystem and climate models. These archives provide invaluable information about terrestrial ice-free areas, a key location for Antarctic biodiversity, and the continental margin which is important for understanding ice sheet dynamics. Recent significant advances in analytical techniques (e.g., genomics, biogeochemical analyses) have led to new applications and greater power in elucidating the environmental records contained within biological archives. Paleoecological and paleoclimate discoveries derived from biological archives, and integration with existing data from other paleoclimate data sources, will significantly expand our understanding of past, present, and future ecological change, alongside climate change, in a unique, globally significant region.
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Affiliation(s)
- Jan M. Strugnell
- Centre for Sustainable Tropical Fisheries and Aquaculture and College of Science and EngineeringJames Cook UniversityTownsvilleQueenslandAustralia
- Securing Antarctica's Environmental FutureJames Cook UniversityTownsvilleQueenslandAustralia
| | - Helen V. McGregor
- Securing Antarctica's Environmental Future, School of Earth, Atmospheric and Life SciencesUniversity of WollongongWollongongNew South WalesAustralia
| | - Nerida G. Wilson
- Securing Antarctica's Environmental FutureWestern Australian MuseumWestern AustraliaAustralia
- Research and CollectionsWestern Australian MuseumWestern AustraliaAustralia
- School of Biological SciencesUniversity of Western AustraliaCrawleyWestern AustraliaAustralia
| | - Karina T. Meredith
- Securing Antarctica's Environmental FutureAustralian Nuclear Science and Technology OrganisationLucas HeightsNew South WalesAustralia
| | - Steven L. Chown
- Securing Antarctica's Environmental Future, School of Biological SciencesMonash UniversityMelbourneVictoriaAustralia
| | - Sally C. Y. Lau
- Centre for Sustainable Tropical Fisheries and Aquaculture and College of Science and EngineeringJames Cook UniversityTownsvilleQueenslandAustralia
- Securing Antarctica's Environmental FutureJames Cook UniversityTownsvilleQueenslandAustralia
| | - Sharon A. Robinson
- Securing Antarctica's Environmental Future, School of Earth, Atmospheric and Life SciencesUniversity of WollongongWollongongNew South WalesAustralia
| | - Krystyna M. Saunders
- Securing Antarctica's Environmental Future, School of Earth, Atmospheric and Life SciencesUniversity of WollongongWollongongNew South WalesAustralia
- Securing Antarctica's Environmental FutureAustralian Nuclear Science and Technology OrganisationLucas HeightsNew South WalesAustralia
- Institute for Marine and Antarctic StudiesUniversity of TasmaniaHobartTasmaniaAustralia
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5
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Bippus AC, Rothwell GW, Stockey RA. Cynodontium luthii sp. nov.: a permineralized moss gametophyte from the Late Cretaceous of the North Slope of Alaska. AMERICAN JOURNAL OF BOTANY 2021; 108:495-504. [PMID: 33650114 DOI: 10.1002/ajb2.1617] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/07/2020] [Accepted: 10/22/2020] [Indexed: 06/12/2023]
Abstract
PREMISE Mosses are a major component of Arctic vegetation today, with >500 species known to date. However, the origins of the Arctic moss flora are poorly documented in the fossil record, especially prior to the Pliocene. Here, we present the first anatomically preserved pre-Cenozoic Arctic moss and discuss how the unique biology of bryophytes has facilitated their success in polar environments over geologic time. METHODS A permineralized fossil moss gametophyte within a block of Late Cretaceous terrestrial limestone, collected along the Colville River on the North Slope of Alaska, was studied in serial sections prepared using the cellulose acetate peel technique. RESULTS The moss gametophyte is branched and has leaves with a broad base, narrow blade, and excurrent costa. We describe this fossil as Cynodontium luthii sp. nov., an extinct species of a genus that is known from the High Arctic today. Cynodontium luthii is the oldest evidence of the family Rhabdoweisiaceae (by ≥18 Ma) and reveals that genera of haplolepideous mosses known in the extant Arctic flora also lived in high-latitude temperate deciduous forests during the Late Cretaceous. CONCLUSIONS The occurrence of C. luthii in Cretaceous sediments, together with a rich Pliocene-to-Holocene fossil record of extant moss genera in the High Arctic, suggests that some moss lineages have exploited their poikilohydric, cold- and desiccation-tolerant physiology to live in the region when it experienced both temperate and freezing climates.
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Affiliation(s)
- Alexander C Bippus
- Department of Botany and Plant Pathology, Oregon State University, Corvallis, Oregon, 97331, USA
| | - Gar W Rothwell
- Department of Botany and Plant Pathology, Oregon State University, Corvallis, Oregon, 97331, USA
- Department of Environmental and Plant Biology, Ohio University, Athens, Ohio, 45701, USA
| | - Ruth A Stockey
- Department of Botany and Plant Pathology, Oregon State University, Corvallis, Oregon, 97331, USA
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Androsiuk P, Chwedorzewska KJ, Dulska J, Milarska S, Giełwanowska I. Retrotransposon-based genetic diversity of Deschampsia antarctica Desv. from King George Island (Maritime Antarctic). Ecol Evol 2021; 11:648-663. [PMID: 33437458 PMCID: PMC7790655 DOI: 10.1002/ece3.7095] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/22/2020] [Revised: 11/16/2020] [Accepted: 11/19/2020] [Indexed: 12/11/2022] Open
Abstract
Deschampsia antarctica Desv. can be found in diverse Antarctic habitats which may vary considerably in terms of environmental conditions and soil properties. As a result, the species is characterized by wide ecotypic variation in terms of both morphological and anatomical traits. The species is a unique example of an organism that can successfully colonize inhospitable regions due to its phenomenal ability to adapt to both the local mosaic of microhabitats and to general climatic fluctuations. For this reason, D. antarctica has been widely investigated in studies analyzing morphophysiological and biochemical responses to various abiotic stresses (frost, drought, salinity, increased UV radiation). However, there is little evidence to indicate whether the observed polymorphism is accompanied by the corresponding genetic variation. In the present study, retrotransposon-based iPBS markers were used to trace the genetic variation of D. antarctica collected in nine sites of the Arctowski oasis on King George Island (Western Antarctic). The genotyping of 165 individuals from nine populations with seven iPBS primers revealed 125 amplification products, 15 of which (12%) were polymorphic, with an average of 5.6% polymorphic fragments per population. Only one of the polymorphic fragments, observed in population 6, was represented as a private band. The analyzed specimens were characterized by low genetic diversity (uHe = 0.021, I = 0.030) and high population differentiation (F ST = 0.4874). An analysis of Fu's F S statistics and mismatch distribution in most populations (excluding population 2, 6 and 9) revealed demographic/spatial expansion, whereas significant traces of reduction in effective population size were found in three populations (1, 3 and 5). The iPBS markers revealed genetic polymorphism of D. antarctica, which could be attributed to the mobilization of random transposable elements, unique features of reproductive biology, and/or geographic location of the examined populations.
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Affiliation(s)
- Piotr Androsiuk
- Department of Plant Physiology, Genetics and BiotechnologyFaculty of Biology and BiotechnologyUniversity of Warmia and Mazury in OlsztynOlsztynPoland
| | | | - Justyna Dulska
- Department of Plant Physiology, Genetics and BiotechnologyFaculty of Biology and BiotechnologyUniversity of Warmia and Mazury in OlsztynOlsztynPoland
| | - Sylwia Milarska
- Department of Plant Physiology, Genetics and BiotechnologyFaculty of Biology and BiotechnologyUniversity of Warmia and Mazury in OlsztynOlsztynPoland
| | - Irena Giełwanowska
- Department of Plant Physiology, Genetics and BiotechnologyFaculty of Biology and BiotechnologyUniversity of Warmia and Mazury in OlsztynOlsztynPoland
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7
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Biersma EM, Convey P, Wyber R, Robinson SA, Dowton M, van de Vijver B, Linse K, Griffiths H, Jackson JA. Latitudinal Biogeographic Structuring in the Globally Distributed Moss Ceratodon purpureus. FRONTIERS IN PLANT SCIENCE 2020; 11:502359. [PMID: 32983208 PMCID: PMC7484499 DOI: 10.3389/fpls.2020.502359] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/02/2019] [Accepted: 08/13/2020] [Indexed: 06/11/2023]
Abstract
Biogeographic patterns of globally widespread species are expected to reflect regional structure, as well as connectivity caused by occasional long-distance dispersal. We assessed the level and drivers of population structure, connectivity, and timescales of population isolation in one of the most widespread and ruderal plants in the world - the common moss Ceratodon purpureus. We applied phylogenetic, population genetic, and molecular dating analyses to a global (n = 147) sampling data set, using three chloroplast loci and one nuclear locus. The plastid data revealed several distinct and geographically structured lineages, with connectivity patterns associated with worldwide, latitudinal "bands." These imply that connectivity is strongly influenced by global atmospheric circulation patterns, with dispersal and establishment beyond these latitudinal bands less common. Biogeographic patterns were less clear within the nuclear marker, with gene duplication likely hindering the detection of these. Divergence time analyses indicated that the current matrilineal population structure in C. purpureus has developed over the past six million years, with lineages diverging during the late Miocene, Pliocene, and Quaternary. Several colonization events in the Antarctic were apparent, as well as one old and distinct Antarctic clade, possibly isolated on the continent since the Pliocene. As C. purpureus is considered a model organism, the matrilineal biogeographic structure identified here provides a useful framework for future genetic and developmental studies on bryophytes. Our general findings may also be relevant to understanding global environmental influences on the biogeography of other organisms with microscopic propagules (e.g., spores) dispersed by wind.
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Affiliation(s)
- Elisabeth M. Biersma
- Biodiversity, Evolution and Adaptation Team, British Antarctic Survey, Cambridge, United Kingdom
- Department of Plant Sciences, University of Cambridge, Cambridge, United Kingdom
- Natural History Museum of Denmark, University of Copenhagen, Copenhagen, Denmark
| | - Peter Convey
- Biodiversity, Evolution and Adaptation Team, British Antarctic Survey, Cambridge, United Kingdom
| | - Rhys Wyber
- School of Earth, Atmospheric and Life Sciences, University of Wollongong, NSW, Australia
| | - Sharon A. Robinson
- School of Earth, Atmospheric and Life Sciences, University of Wollongong, NSW, Australia
| | - Mark Dowton
- School of Chemistry and Molecular Bioscience, University of Wollongong, Wollongong, NSW, Australia
| | - Bart van de Vijver
- Research Department, Botanic Garden Meise, Meise, Belgium
- Ecosystem Management (ECOBE), Department of Biology, University of Antwerp, Antwerp, Belgium
| | - Katrin Linse
- Biodiversity, Evolution and Adaptation Team, British Antarctic Survey, Cambridge, United Kingdom
| | - Howard Griffiths
- Department of Plant Sciences, University of Cambridge, Cambridge, United Kingdom
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Zaccara S, Patiño J, Convey P, Vanetti I, Cannone N. Multiple colonization and dispersal events hide the early origin and induce a lack of genetic structure of the moss Bryum argenteum in Antarctica. Ecol Evol 2020; 10:8959-8975. [PMID: 32884671 PMCID: PMC7452785 DOI: 10.1002/ece3.6601] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/07/2020] [Revised: 06/24/2020] [Accepted: 06/26/2020] [Indexed: 11/16/2022] Open
Abstract
The dispersal routes of taxa with transoceanic disjunctions remain poorly understood, with the potential roles of Antarctica not yet demonstrated. Mosses are suitable organisms to test direct intra-Antarctic dispersal, as major component of the extant Antarctic flora, with the cosmopolitan moss Bryum argenteum as ideal target species. We analyzed the genetic structure of B. argenteum to provide an evolutionary time frame for its radiation and shed light into its historical biogeography in the Antarctic region. We tested two alternative scenarios: (a) intra-Antarctic panmixia and (b) intra-Antarctic genetic differentiation. Furthermore, we tested for evidence of the existence of specific intra-Antarctic dispersal routes. Sixty-seven new samples (40 collected in Antarctica) were sequenced for ITS nrDNA and rps4 cpDNA regions, and phylogenetic trees of B. argenteum were constructed, with a focus on its Southern Hemisphere. Combining our new nrDNA dataset with previously published datasets, we estimated time-calibrated phylogenies based on two different substitution rates (derived from angiosperms and bryophytes) along with ancestral area estimations. Minimum spanning network and pairwise genetic distances were also calculated. B. argenteum was potentially distributed across Africa and Antarctica soon after its origin. Its earliest intra-Antarctic dispersal and diversification occurred during a warming period in the Pliocene. On the same timescale, a radiation took place involving a dispersal event from Antarctica to the sub-Antarctic islands. A more recent event of dispersal and diversification within Antarctica occurred during a warm period in the Pleistocene, creating favorable conditions also for its colonization outside the Antarctic continent worldwide. We provide evidence supporting the hypothesis that contemporary populations of B. argenteum in Antarctica integrate a history of both multiple long-range dispersal events and local persistence combined with in situ diversification. Our data support the hypothesis that B. argenteum has been characterized by strong connectivity within Antarctica, suggesting the existence of intra-Antarctic dispersal routes.
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Affiliation(s)
- Serena Zaccara
- Department of Theoretical and Applied SciencesInsubria UniversityVareseVAItaly
| | - Jairo Patiño
- Plant Conservation and BiogeographyDepartamento de BotánicaEcología y Fisiología VegetalUniversidad de La LagunaLa LagunaSpain
| | - Peter Convey
- British Antarctic SurveyNatural Environment Research CouncilHigh CrossCambridgeUK
| | - Isabella Vanetti
- Department of Theoretical and Applied SciencesInsubria UniversityVareseVAItaly
| | - Nicoletta Cannone
- Department of Science and High TechnologyInsubria UniversityComoCOItaly
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Saługa M. At the crossroads of botanical collections and molecular genetics laboratory: a preliminary study of obtaining amplifiable DNA from moss herbarium material. PeerJ 2020; 8:e9109. [PMID: 32518721 PMCID: PMC7258893 DOI: 10.7717/peerj.9109] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/14/2019] [Accepted: 04/10/2020] [Indexed: 12/04/2022] Open
Abstract
Background Research focused on extreme environments is often associated with difficulties in obtaining fresh plant material. Herbaria may provide great support as they house large collections of specimens from different parts of the world. Accordingly, there is also a growing interest in methods using herbarium specimens in molecular studies. Much of the literature on herbarium DNA is aimed to improve extraction and PCR amplification and is focused mostly on vascular plants. Here, I provide a brief study of DNA extraction efficiency from moss herbarium specimens, emphasizing the importance of herbaria as an invaluable source of material from hard-to-access geographical areas, such as the Antarctic region. Methods The presented study is based on herbarium collections of 25 moss species collected in the austral polar regions between 1979 and 2013. The majority of samples were obtained using the DNeasy Plant Mini Kit (Qiagen, Hilden, Germany). The remaining, smaller part was extracted using an adapted CTAB-based approach. The performance of DNA extraction methods in terms of PCR amplification success was measured by testing several DNA fragments of various size. Furthermore, in order to estimate of DNA fragmentation level, an automated on-chip electrophoresis system was used. Results Results reveal that DNA purity and the length of the target genetic region are the fundamental agents which drive the successful PCR reaction. Conversely, the DNA yield and specimen age seem to be less relevant. With this study, I present also an optimized CTAB-based approach which may effectively suppress inhibitors in the herbarium DNA. This method can be considered a cheaper alternative to column-based technology, particularly useful for dealing with a large number of samples. Results of this study confirmed previous reports and contribute to filling the existing gap in molecular analyses which involve the use of herbarium collections of mosses.
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Affiliation(s)
- Marta Saługa
- Władysław Szafer Institute of Botany, Polish Academy of Sciences, Kraków, Poland
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10
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McGaughran A, Terauds A, Convey P, Fraser CI. Genome‐wide SNP data reveal improved evidence for Antarctic glacial refugia and dispersal of terrestrial invertebrates. Mol Ecol 2019; 28:4941-4957. [DOI: 10.1111/mec.15269] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/15/2019] [Revised: 09/19/2019] [Accepted: 09/25/2019] [Indexed: 01/05/2023]
Affiliation(s)
- Angela McGaughran
- Division of Ecology and Evolution Research School of Biology Australian National University Canberra ACT Australia
- Black Mountain Laboratories Commonwealth Scientific and Industrial Research Organisation Acton ACT Australia
| | - Aleks Terauds
- Department of Energy and the Environment Australian Antarctic Division Kingston Tas. Australia
- Fenner School of Environment and Society College of Science Australian National University Canberra ACT Australia
| | - Peter Convey
- British Antarctic Survey NERC, High Cross Cambridge UK
| | - Ceridwen I. Fraser
- Fenner School of Environment and Society College of Science Australian National University Canberra ACT Australia
- Department of Marine Science University of Otago Dunedin New Zealand
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11
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Ledent A, Désamoré A, Laenen B, Mardulyn P, McDaniel SF, Zanatta F, Patiño J, Vanderpoorten A. No borders during the post-glacial assembly of European bryophytes. Ecol Lett 2019; 22:973-986. [PMID: 30900805 DOI: 10.1111/ele.13254] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/09/2018] [Revised: 11/11/2018] [Accepted: 02/24/2019] [Indexed: 11/28/2022]
Abstract
Climatic fluctuations during the Last Glacial Maximum (LGM) exerted a profound influence on biodiversity patterns, but their impact on bryophytes, the second most diverse group of land plants, has been poorly documented. Approximate Bayesian computations based on coalescent simulations showed that the post-glacial assembly of European bryophytes involves a complex history from multiple sources. The contribution of allochthonous migrants was 95-100% of expanding populations in about half of the 15 investigated species, which is consistent with the globally balanced genetic diversities and extremely low divergence observed among biogeographical regions. Such a substantial contribution of allochthonous migrants in the post-glacial assembly of Europe is unparalleled in other plants and animals. The limited role of northern micro-refugia, which was unexpected based on bryophyte life-history traits, and of southern refugia, is consistent with recent palaeontological evidence that LGM climates in Eurasia were much colder and drier than what palaeoclimatic models predict.
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Affiliation(s)
- A Ledent
- Institute of Botany, University of Liege, Sart Tilman, 4000, Liege, Belgium
| | - A Désamoré
- Department of Ecology, Environment, and Plant Sciences, Science for Life Laboratory, Stockholm University, Stockholm, Sweden
| | - B Laenen
- Department of Ecology, Environment, and Plant Sciences, Science for Life Laboratory, Stockholm University, Stockholm, Sweden
| | - P Mardulyn
- Evolutionary Biology & Ecology, Université Libre de Bruxelles, 1050, Brussels, Belgium
| | - S F McDaniel
- Biology Department, University of Florida, Gainesville, FL, 32611, USA
| | - F Zanatta
- Institute of Botany, University of Liege, Sart Tilman, 4000, Liege, Belgium
| | - J Patiño
- Plant Conservation and Biogeography Group, Departamento de Botánica, Ecología y Fisiología Vegetal, Universidad de La Laguna, 38071, La Laguna, Spain.,Island Ecology and Evolution Research Group, Instituto de Productos Naturales y Agrobiología (IPNA-CSIC), 38071, La Laguna, Spain
| | - A Vanderpoorten
- Institute of Botany, University of Liege, Sart Tilman, 4000, Liege, Belgium
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12
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Antarctic Studies Show Lichens to be Excellent Biomonitors of Climate Change. DIVERSITY-BASEL 2019. [DOI: 10.3390/d11030042] [Citation(s) in RCA: 39] [Impact Index Per Article: 7.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/31/2023]
Abstract
Lichens have been used as biomonitors for multiple purposes. They are well-known as air pollution indicators around urban and industrial centers. More recently, several attempts have been made to use lichens as monitors of climate change especially in alpine and polar regions. In this paper, we review the value of saxicolous lichens for monitoring environmental changes in Antarctic regions. The pristine Antarctica offers a unique opportunity to study the effects of climate change along a latitudinal gradient that extends between 62° and 87° S. Both lichen species diversity and thallus growth rate seem to show significant correlations to mean annual temperature for gradients across the continent as well as to short time climate oscillation in the Antarctic Peninsula. Competition interactions appear to be small so that individual thalli develop in balance with environmental conditions and, as a result, can indicate the trends in productivity for discrete time intervals over long periods of time.
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13
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Saługa M, Ochyra R, Żarnowiec J, Ronikier M. Do Antarctic populations represent local or widespread phylogenetic and ecological lineages? Complicated fate of bipolar moss concepts with Drepanocladus longifolius as a case study. ORG DIVERS EVOL 2018. [DOI: 10.1007/s13127-018-0372-8] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/28/2022]
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14
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Biersma EM, Jackson JA, Stech M, Griffiths H, Linse K, Convey P. Molecular Data Suggest Long-Term in Situ Antarctic Persistence Within Antarctica's Most Speciose Plant Genus, Schistidium. Front Ecol Evol 2018. [DOI: 10.3389/fevo.2018.00077] [Citation(s) in RCA: 26] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/05/2023] Open
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15
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Shibata Y, Mohamed A, Taniyama K, Kanatani K, Kosugi M, Fukumura H. Red shift in the spectrum of a chlorophyll species is essential for the drought-induced dissipation of excess light energy in a poikilohydric moss, Bryum argenteum. PHOTOSYNTHESIS RESEARCH 2018; 136:229-243. [PMID: 29124652 DOI: 10.1007/s11120-017-0461-0] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/25/2017] [Accepted: 10/27/2017] [Indexed: 06/07/2023]
Abstract
Some mosses are extremely tolerant of drought stress. Their high drought tolerance relies on their ability to effectively dissipate absorbed light energy to heat under dry conditions. The energy dissipation mechanism in a drought-tolerant moss, Bryum argenteum, has been investigated using low-temperature picosecond time-resolved fluorescence spectroscopy. The results are compared between moss thalli samples harvested in Antarctica and in Japan. Both samples show almost the same quenching properties, suggesting an identical drought tolerance mechanism for the same species with two completely different habitats. A global target analysis was applied to a large set of data on the fluorescence-quenching dynamics for the 430-nm (chlorophyll-a selective) and 460-nm (chlorophyll-b and carotenoid selective) excitations in the temperature region from 5 to 77 K. This analysis strongly suggested that the quencher is formed in the major peripheral antenna of photosystem II, whose emission spectrum is significantly broadened and red-shifted in its quenched form. Two emission components at around 717 and 725 nm were assigned to photosystem I (PS I). The former component at around 717 nm is mildly quenched and probably bound to the PS I core complex, while the latter at around 725 nm is probably bound to the light-harvesting complex. The dehydration treatment caused a blue shift of the PS I emission peak via reduction of the exciton energy flow to the pigment responsible for the 725 nm band.
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Affiliation(s)
- Yutaka Shibata
- Department of Chemistry, Graduate School of Science, Tohoku University, Aramaki Aza Aoba, Aoba-Ku, Sendai, 980-8578, Japan.
| | - Ahmed Mohamed
- Department of Chemistry, Graduate School of Science, Tohoku University, Aramaki Aza Aoba, Aoba-Ku, Sendai, 980-8578, Japan
- Institut national de la recherche scientifique (INRS-EMT), Varennes, QC, J3X 1S2, Canada
| | - Koichiro Taniyama
- Department of Chemistry, Graduate School of Science, Tohoku University, Aramaki Aza Aoba, Aoba-Ku, Sendai, 980-8578, Japan
| | - Kentaro Kanatani
- Department of Chemistry, Graduate School of Science, Tohoku University, Aramaki Aza Aoba, Aoba-Ku, Sendai, 980-8578, Japan
| | - Makiko Kosugi
- Department of Biological Science, Faculty of Science and Engineering, Chuo University, 1-13-27 Kasuga, Bunkyo-Ku, Tokyo, 112-8551, Japan
| | - Hiroshi Fukumura
- Department of Chemistry, Graduate School of Science, Tohoku University, Aramaki Aza Aoba, Aoba-Ku, Sendai, 980-8578, Japan
- National Institute of Technology, 4-16-1 Ayashi-chuo, Aoba-ku, Sendai, 989-3128, Japan
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16
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Biersma EM, Jackson JA, Bracegirdle TJ, Griffiths H, Linse K, Convey P. Low genetic variation between South American and Antarctic populations of the bank-forming moss Chorisodontium aciphyllum (Dicranaceae). Polar Biol 2018. [DOI: 10.1007/s00300-017-2221-1] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
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17
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Biersma EM, Jackson JA, Hyvönen J, Koskinen S, Linse K, Griffiths H, Convey P. Global biogeographic patterns in bipolar moss species. ROYAL SOCIETY OPEN SCIENCE 2017; 4:170147. [PMID: 28791139 PMCID: PMC5541534 DOI: 10.1098/rsos.170147] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/21/2017] [Accepted: 06/08/2017] [Indexed: 05/20/2023]
Abstract
A bipolar disjunction is an extreme, yet common, biogeographic pattern in non-vascular plants, yet its underlying mechanisms (vicariance or long-distance dispersal), origin and timing remain poorly understood. Here, combining a large-scale population dataset and multiple dating analyses, we examine the biogeography of four bipolar Polytrichales mosses, common to the Holarctic (temperate and polar Northern Hemisphere regions) and the Antarctic region (Antarctic, sub-Antarctic, southern South America) and other Southern Hemisphere (SH) regions. Our data reveal contrasting patterns, for three species were of Holarctic origin, with subsequent dispersal to the SH, while one, currently a particularly common species in the Holarctic (Polytrichum juniperinum), diversified in the Antarctic region and from here colonized both the Holarctic and other SH regions. Our findings suggest long-distance dispersal as the driver of bipolar disjunctions. We find such inter-hemispheric dispersals are rare, occurring on multi-million-year timescales. High-altitude tropical populations did not act as trans-equatorial 'stepping-stones', but rather were derived from later dispersal events. All arrivals to the Antarctic region occurred well before the Last Glacial Maximum and previous glaciations, suggesting that, despite the harsh climate during these past glacial maxima, plants have had a much longer presence in this southern region than previously thought.
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Affiliation(s)
- E. M. Biersma
- Department of Plant Sciences, University of Cambridge, Downing Street, Cambridge CB2 3EA, UK
- British Antarctic Survey, Natural Environment Research Council, High Cross, Madingley Road, Cambridge CB3 0ET, UK
| | - J. A. Jackson
- British Antarctic Survey, Natural Environment Research Council, High Cross, Madingley Road, Cambridge CB3 0ET, UK
| | - J. Hyvönen
- Finnish Museum of Natural History (Botany) and Viikki Plant Science Centre, Department of Biosciences, University of Helsinki, PO Box 7, Helsinki FIN-00014, Finland
| | - S. Koskinen
- Department of Biochemistry, University of Turku, Turku, 20014, Finland
| | - K. Linse
- British Antarctic Survey, Natural Environment Research Council, High Cross, Madingley Road, Cambridge CB3 0ET, UK
| | - H. Griffiths
- Department of Plant Sciences, University of Cambridge, Downing Street, Cambridge CB2 3EA, UK
| | - P. Convey
- British Antarctic Survey, Natural Environment Research Council, High Cross, Madingley Road, Cambridge CB3 0ET, UK
- National Antarctic Research Center, Institute of Graduate Studies, University of Malaya, 50603 Kuala Lumpur, Malaysia
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18
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Moon KL, Chown SL, Fraser CI. Reconsidering connectivity in the sub-Antarctic. Biol Rev Camb Philos Soc 2017; 92:2164-2181. [DOI: 10.1111/brv.12327] [Citation(s) in RCA: 47] [Impact Index Per Article: 6.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/06/2016] [Revised: 02/09/2017] [Accepted: 02/15/2017] [Indexed: 12/21/2022]
Affiliation(s)
- Katherine L. Moon
- School of Biological Sciences; Monash University; Clayton 3800 Australia
- Fenner School of Environment and Society; Australian National University; Acton 2601 Australia
| | - Steven L. Chown
- School of Biological Sciences; Monash University; Clayton 3800 Australia
| | - Ceridwen I. Fraser
- Fenner School of Environment and Society; Australian National University; Acton 2601 Australia
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19
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Désamoré A, Patiño J, Mardulyn P, Mcdaniel SF, Zanatta F, Laenen B, Vanderpoorten A. High migration rates shape the postglacial history of amphi-Atlantic bryophytes. Mol Ecol 2016; 25:5568-5584. [PMID: 27661065 DOI: 10.1111/mec.13839] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/08/2015] [Revised: 08/29/2016] [Accepted: 08/31/2016] [Indexed: 11/28/2022]
Abstract
Paleontological evidence and current patterns of angiosperm species richness suggest that European biota experienced more severe bottlenecks than North American ones during the last glacial maximum. How well this pattern fits other plant species is less clear. Bryophytes offer a unique opportunity to contrast the impact of the last glacial maximum in North America and Europe because about 60% of the European bryoflora is shared with North America. Here, we use population genetic analyses based on approximate Bayesian computation on eight amphi-Atlantic species to test the hypothesis that North American populations were less impacted by the last glacial maximum, exhibiting higher levels of genetic diversity than European ones and ultimately serving as a refugium for the postglacial recolonization of Europe. In contrast with this hypothesis, the best-fit demographic model involved similar patterns of population size contractions, comparable levels of genetic diversity and balanced migration rates between European and North American populations. Our results thus suggest that bryophytes have experienced comparable demographic glacial histories on both sides of the Atlantic. Although a weak, but significant genetic structure was systematically recovered between European and North American populations, evidence for migration from and towards both continents suggests that amphi-Atlantic bryophyte population may function as a metapopulation network. Reconstructing the biogeographic history of either North American or European bryophyte populations therefore requires a large, trans-Atlantic geographic framework.
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Affiliation(s)
- Aurélie Désamoré
- Institute of Botany, University of Liège, B22 Sart Tilman, Liège, Belgium. .,Department of Zoology, Swedish Museum of Natural History, Box 50007, SE-104 05, Stockholm, Sweden.
| | - Jairo Patiño
- Institute of Botany, University of Liège, B22 Sart Tilman, Liège, Belgium.,Island Ecology and Evolution Research Group, Instituto de Productos Naturales y Agrobiología (IPNA-CSIC), Tenerife, Canary Islands, 38206, Spain.,Centre for Ecology, Evolution and Environmental Changes and Platform for Enhancing Ecological Research & Sustainability, Universidade dos Açores, 9700-042, Angra do Heroísmo, Terceira, Açores, Portugal
| | - Patrick Mardulyn
- Department of Evolutionary Biology and Ecology, Université libre de Bruxelles, Campus du Solbosch, Avenue F.D. Roosevelt 50, 1050, Bruxelles, Belgium
| | - Stuart F Mcdaniel
- Department of Biology, University of Florida, Box 118525, Gainesville, FL, 32611-8525, USA
| | - Florian Zanatta
- Institute of Botany, University of Liège, B22 Sart Tilman, Liège, Belgium
| | - Benjamin Laenen
- Institute of Botany, University of Liège, B22 Sart Tilman, Liège, Belgium.,SciLifeLab Stockholm, Department of Ecology, Environment and Plant Sciences, Stockholm University, Tomtebodav. 23a, 171 21, Solna, Stockholm, Sweden
| | - Alain Vanderpoorten
- Institute of Botany, University of Liège, B22 Sart Tilman, Liège, Belgium.,Island Ecology and Evolution Research Group, Instituto de Productos Naturales y Agrobiología (IPNA-CSIC), Tenerife, Canary Islands, 38206, Spain
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20
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Range size heritability and diversification patterns in the liverwort genus Radula. Mol Phylogenet Evol 2016; 106:73-85. [PMID: 27664347 DOI: 10.1016/j.ympev.2016.09.020] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/18/2016] [Revised: 09/17/2016] [Accepted: 09/20/2016] [Indexed: 11/20/2022]
Abstract
Why some species exhibit larger geographical ranges than others, and to what extent does variation in range size affect diversification rates, remains a fundamental, but largely unanswered question in ecology and evolution. Here, we implement phylogenetic comparative analyses and ancestral area estimations in Radula, a liverwort genus of Cretaceous origin, to investigate the mechanisms that explain differences in geographical range size and diversification rates among lineages. Range size was phylogenetically constrained in the two sub-genera characterized by their almost complete Australasian and Neotropical endemicity, respectively. The congruence between the divergence time of these lineages and continental split suggests that plate tectonics could have played a major role in their present distribution, suggesting that a strong imprint of vicariance can still be found in extant distribution patterns in these highly mobile organisms. Amentuloradula, Volutoradula and Metaradula species did not appear to exhibit losses of dispersal capacities in terms of dispersal life-history traits, but evidence for significant phylogenetic signal in macroecological niche traits suggests that niche conservatism accounts for their restricted geographic ranges. Despite their greatly restricted distribution to Australasia and Neotropics respectively, Amentuloradula and Volutoradula did not exhibit significantly lower diversification rates than more widespread lineages, in contrast with the hypothesis that the probability of speciation increases with range size by promoting geographic isolation and increasing the rate at which novel habitats are encountered. We suggest that stochastic long-distance dispersal events may balance allele frequencies across large spatial scales, leading to low genetic structure among geographically distant areas or even continents, ultimately decreasing the diversification rates in highly mobile, widespread lineages.
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21
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Moore JD, Kollar LM, McLetchie DN. Does selection for gamete dispersal and capture lead to a sex difference in clump water-holding capacity? AMERICAN JOURNAL OF BOTANY 2016; 103:1449-1457. [PMID: 27539259 DOI: 10.3732/ajb.1600096] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/29/2016] [Accepted: 07/06/2016] [Indexed: 06/06/2023]
Abstract
PREMISE OF THE STUDY Differences in male and female reproductive function can lead to selection for sex-specific gamete dispersal and capture traits. These traits have been explored from shoot to whole plant levels in wind-pollinated species. While shoot traits have been explored in water-fertilized species, little is known about how whole plant morphology affects gamete dispersal and capture. We used the dioecious, water-fertilized plant Bryum argenteum to test for differences in clump morphology and water-holding characteristics consistent with divergent selection. We hypothesized that sex-specific clump morphology, arising at maturity, produces relatively low male water-holding capacity for gamete dispersal and high female capacity for gamete capture. METHODS We measured isolated young shoot and clump water-holding capacity and clump morphological characteristics on greenhouse-grown plants. Young shoot capacity was used to predict clump capacity, which was compared with actual clump capacity. KEY RESULTS Young male shoots held more water per unit length, and male clumps had higher shoot density, which extrapolated to higher clump water-holding capacity. However, female clumps held more water and were taller with more robust shoots. Actual clump capacity correlated positively with clump height and shoot cross-sectional area. CONCLUSIONS The sex difference in actual clump capacity and its unpredictability from younger shoots are consistent with our hypothesis that males should hold less water than females to facilitate sexual reproduction. These results provide conceptual connections to other plant groups and implications for connecting divergent selection to female-biased sex ratios in B. argenteum and other bryophytes.
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Affiliation(s)
- Jonathan D Moore
- Department of Biology, University of Kentucky, 101 T.H. Morgan Building, Lexington, Kentucky 40506-0225 USA
| | - Leslie M Kollar
- Department of Biology, University of Kentucky, 101 T.H. Morgan Building, Lexington, Kentucky 40506-0225 USA
| | - D Nicholas McLetchie
- Department of Biology, University of Kentucky, 101 T.H. Morgan Building, Lexington, Kentucky 40506-0225 USA
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22
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Raymond JA. Dependence on epiphytic bacteria for freezing protection in an Antarctic moss, Bryum argenteum. ENVIRONMENTAL MICROBIOLOGY REPORTS 2016; 8:14-19. [PMID: 26417678 DOI: 10.1111/1758-2229.12337] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/29/2015] [Revised: 09/20/2015] [Accepted: 09/20/2015] [Indexed: 06/05/2023]
Abstract
Mosses are the dominant flora of Antarctica, but their mechanisms of survival in the face of extreme low temperatures are poorly understood. A variety of Bryum argenteum from 77° S was previously shown to have strong ice-pitting activity, a sign of the presence of ice-binding proteins (IBPs) that mitigate freezing damage. Here, using samples that had been stored at -25(o) C for 10 years, it is shown that much if not all of the activity is due to bacterial ice-binding proteins secreted on the leaves of the moss. Sequencing of the leaf metagenome revealed the presence of hundreds of genes from a variety of bacteria (mostly Actinobacteria and Bacteroidetes) that encode a domain (DUF3494) that is associated with ice binding. The frequency of occurrence of this domain is one to two orders of magnitude higher than it is in representative mesophilic bacterial metagenomes. Genes encoding 42 bacterial IBPs with N-terminal secretion signals were assembled. There appears to be a commensal relationship in which the moss provides sustenance to the bacteria in return for freezing protection.
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Affiliation(s)
- James A Raymond
- School of Life Sciences, University of Nevada Las Vegas, Las Vegas, NV, 89154, USA
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Abstract
The Antarctic region comprises the continent, the Maritime Antarctic, the sub-Antarctic islands, and the southern cold temperate islands. Continental Antarctica is devoid of insects, but elsewhere diversity varies from 2 to more than 200 species, of which flies and beetles constitute the majority. Much is known about the drivers of this diversity at local and regional scales; current climate and glacial history play important roles. Investigations of responses to low temperatures, dry conditions, and varying salinity have spanned the ecological to the genomic, revealing new insights into how insects respond to stressful conditions. Biological invasions are common across much of the region and are expected to increase as climates become warmer. The drivers of invasion are reasonably well understood, although less is known about the impacts of invasion. Antarctic entomology has advanced considerably over the past 50 years, but key areas, such as interspecific interactions, remain underexplored.
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Affiliation(s)
- Steven L Chown
- School of Biological Sciences, Monash University, Victoria 3800, Australia;
| | - Peter Convey
- British Antarctic Survey, Natural Environment Research Council, Cambridge CB3 0ET, United Kingdom;
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Pointing SB, Burkhard Büdel, Convey P, Gillman LN, Körner C, Leuzinger S, Vincent WF. Biogeography of photoautotrophs in the high polar biome. FRONTIERS IN PLANT SCIENCE 2015; 6:692. [PMID: 26442009 PMCID: PMC4566839 DOI: 10.3389/fpls.2015.00692] [Citation(s) in RCA: 36] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/22/2015] [Accepted: 08/21/2015] [Indexed: 11/19/2023]
Abstract
The global latitudinal gradient in biodiversity weakens in the high polar biome and so an alternative explanation for distribution of Arctic and Antarctic photoautotrophs is required. Here we identify how temporal, microclimate and evolutionary drivers of biogeography are important, rather than the macroclimate features that drive plant diversity patterns elsewhere. High polar ecosystems are biologically unique, with a more central role for bryophytes, lichens and microbial photoautotrophs over that of vascular plants. Constraints on vascular plants arise mainly due to stature and ontogenetic barriers. Conversely non-vascular plant and microbial photoautotroph distribution is correlated with favorable microclimates and the capacity for poikilohydric dormancy. Contemporary distribution also depends on evolutionary history, with adaptive and dispersal traits as well as legacy influencing biogeography. We highlight the relevance of these findings to predicting future impacts on diversity of polar photoautotrophs and to the current status of plants in Arctic and Antarctic conservation policy frameworks.
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Affiliation(s)
- Stephen B. Pointing
- Institute for Applied Ecology New Zealand, School of Applied Sciences, Auckland University of Technology, Auckland, New Zealand
| | - Burkhard Büdel
- Department of Biology, University of Kaiserslautern, Kaiserslautern, Germany
| | - Peter Convey
- British Antarctic Survey, NERC, Cambridge, UK
- National Antarctic Research Centre, University of Malaya, Kuala Lumpur, Malaysia
| | - Len N. Gillman
- Institute for Applied Ecology New Zealand, School of Applied Sciences, Auckland University of Technology, Auckland, New Zealand
| | | | - Sebastian Leuzinger
- Institute for Applied Ecology New Zealand, School of Applied Sciences, Auckland University of Technology, Auckland, New Zealand
| | - Warwick F. Vincent
- Centre d’\Études Nordiques and Département de Biologie, Université Laval, Québec, QC, Canada
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Pisa S, Vanderpoorten A, Patiño J, Werner O, González-Mancebo JM, Ros RM. How to define nativeness in vagile organisms: lessons from the cosmopolitan moss Bryum argenteum on the island of Tenerife (Canary Islands). PLANT BIOLOGY (STUTTGART, GERMANY) 2015; 17:1057-1065. [PMID: 25980839 DOI: 10.1111/plb.12348] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/16/2015] [Accepted: 05/13/2015] [Indexed: 06/04/2023]
Abstract
The distinction between native and introduced biotas presents unique challenges that culminate in organisms with high long-distance dispersal capacities in a rapidly changing world. Bryophytes, in particular, exhibit large distribution ranges, and some species can truly be qualified as cosmopolitan. Cosmopolitan species, however, typically occur in disturbed environments, raising the question of their nativeness throughout their range. Here, we employ genetic data to address the question of the origin of the cosmopolitan, weedy moss Bryum argenteum on the island of Tenerife. The genetic diversity of B. argenteum on Tenerife was comparable to that found in continental areas due to recurrent colonisation events, erasing any signature of a bottleneck that would be expected in the case of a recent colonisation event. The molecular dating analyses indicated that the first colonisation of the island took place more than 100,000 years ago, i.e. well before the first human settlements. Furthermore, the significant signal for isolation-by-distance found in B. argenteum within Tenerife points to the substantial role of genetic drift in establishing the observed patterns of genetic variation. Together, the results support the hypothesis that B. argenteum is native on Tenerife; although the existence of haplotypes shared between Tenerife and continental areas suggests that more recent, potentially man-mediated introduction also took place. While defining nativeness in organisms that are not deliberately introduced, and wherein the fossil record is extremely scarce, is an exceedingly challenging task, our results suggest that population genetic analyses can represent a useful tool to help distinguish native from alien populations.
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Affiliation(s)
- S Pisa
- Departamento de Biología Vegetal, Universidad de Murcia, Murcia, Spain
| | | | - J Patiño
- Institute of Botany, University of Liège, Liège, Belgium
- Departamento de Biología Vegetal, Universidad de La Laguna, Tenerife, Spain
| | - O Werner
- Departamento de Biología Vegetal, Universidad de Murcia, Murcia, Spain
| | | | - R M Ros
- Departamento de Biología Vegetal, Universidad de Murcia, Murcia, Spain
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27
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Chown SL, Clarke A, Fraser CI, Cary SC, Moon KL, McGeoch MA. The changing form of Antarctic biodiversity. Nature 2015; 522:431-8. [DOI: 10.1038/nature14505] [Citation(s) in RCA: 202] [Impact Index Per Article: 22.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/23/2015] [Accepted: 04/24/2015] [Indexed: 11/09/2022]
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