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Pakaya R, Daniel D, Widayani P, Utarini A. Spatial model of Dengue Hemorrhagic Fever (DHF) risk: scoping review. BMC Public Health 2023; 23:2448. [PMID: 38062404 PMCID: PMC10701958 DOI: 10.1186/s12889-023-17185-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/28/2023] [Accepted: 11/08/2023] [Indexed: 12/18/2023] Open
Abstract
BACKGROUND Creating a spatial model of dengue fever risk is challenging duet to many interrelated factors that could affect dengue. Therefore, it is crucial to understand how these critical factors interact and to create reliable predictive models that can be used to mitigate and control the spread of dengue. METHODS This scoping review aims to provide a comprehensive overview of the important predictors, and spatial modelling tools capable of producing Dengue Haemorrhagic Fever (DHF) risk maps. We conducted a methodical exploration utilizing diverse sources, i.e., PubMed, Scopus, Science Direct, and Google Scholar. The following data were extracted from articles published between January 2011 to August 2022: country, region, administrative level, type of scale, spatial model, dengue data use, and categories of predictors. Applying the eligibility criteria, 45 out of 1,349 articles were selected. RESULTS A variety of models and techniques were used to identify DHF risk areas with an arrangement of various multiple-criteria decision-making, statistical, and machine learning technique. We found that there was no pattern of predictor use associated with particular approaches. Instead, a wide range of predictors was used to create the DHF risk maps. These predictors may include climatology factors (e.g., temperature, rainfall, humidity), epidemiological factors (population, demographics, socio-economic, previous DHF cases), environmental factors (land-use, elevation), and relevant factors. CONCLUSIONS DHF risk spatial models are useful tools for detecting high-risk locations and driving proactive public health initiatives. Relying on geographical and environmental elements, these models ignored the impact of human behaviour and social dynamics. To improve the prediction accuracy, there is a need for a more comprehensive approach to understand DHF transmission dynamics.
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Affiliation(s)
- Ririn Pakaya
- Doctoral Program in Public Health, Faculty of Medicine, Public Health and Nursing, Universitas Gadjah Mada, Yogyakarta, Indonesia.
- Department of Public Health, Public Health Faculty, Universitas Gorontalo, Gorontalo, Indonesia.
| | - D Daniel
- Department of Health Behaviour, Environment and Social Medicine, Faculty of Medicine, Public Health and Nursing, Universitas Gadjah Mada, Yogyakarta, Indonesia
| | - Prima Widayani
- Department of Geographic Information Science, Faculty of Geography, Universitas Gadjah Mada, Yogyakarta, Indonesia
| | - Adi Utarini
- Doctoral Program in Public Health, Faculty of Medicine, Public Health and Nursing, Universitas Gadjah Mada, Yogyakarta, Indonesia
- Department of Health Policy and Management, Faculty of Medicine, Public Health and Nursing, Universitas Gadjah Mada, Yogyakarta, Indonesia
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Lim AY, Jafari Y, Caldwell JM, Clapham HE, Gaythorpe KAM, Hussain-Alkhateeb L, Johansson MA, Kraemer MUG, Maude RJ, McCormack CP, Messina JP, Mordecai EA, Rabe IB, Reiner RC, Ryan SJ, Salje H, Semenza JC, Rojas DP, Brady OJ. A systematic review of the data, methods and environmental covariates used to map Aedes-borne arbovirus transmission risk. BMC Infect Dis 2023; 23:708. [PMID: 37864153 PMCID: PMC10588093 DOI: 10.1186/s12879-023-08717-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/14/2023] [Accepted: 10/16/2023] [Indexed: 10/22/2023] Open
Abstract
BACKGROUND Aedes (Stegomyia)-borne diseases are an expanding global threat, but gaps in surveillance make comprehensive and comparable risk assessments challenging. Geostatistical models combine data from multiple locations and use links with environmental and socioeconomic factors to make predictive risk maps. Here we systematically review past approaches to map risk for different Aedes-borne arboviruses from local to global scales, identifying differences and similarities in the data types, covariates, and modelling approaches used. METHODS We searched on-line databases for predictive risk mapping studies for dengue, Zika, chikungunya, and yellow fever with no geographical or date restrictions. We included studies that needed to parameterise or fit their model to real-world epidemiological data and make predictions to new spatial locations of some measure of population-level risk of viral transmission (e.g. incidence, occurrence, suitability, etc.). RESULTS We found a growing number of arbovirus risk mapping studies across all endemic regions and arboviral diseases, with a total of 176 papers published 2002-2022 with the largest increases shortly following major epidemics. Three dominant use cases emerged: (i) global maps to identify limits of transmission, estimate burden and assess impacts of future global change, (ii) regional models used to predict the spread of major epidemics between countries and (iii) national and sub-national models that use local datasets to better understand transmission dynamics to improve outbreak detection and response. Temperature and rainfall were the most popular choice of covariates (included in 50% and 40% of studies respectively) but variables such as human mobility are increasingly being included. Surprisingly, few studies (22%, 31/144) robustly tested combinations of covariates from different domains (e.g. climatic, sociodemographic, ecological, etc.) and only 49% of studies assessed predictive performance via out-of-sample validation procedures. CONCLUSIONS Here we show that approaches to map risk for different arboviruses have diversified in response to changing use cases, epidemiology and data availability. We identify key differences in mapping approaches between different arboviral diseases, discuss future research needs and outline specific recommendations for future arbovirus mapping.
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Affiliation(s)
- Ah-Young Lim
- Department of Infectious Disease Epidemiology and Dynamics, Faculty of Epidemiology and Population Health, London School of Hygiene & Tropical Medicine, London, UK.
- Centre for Mathematical Modelling of Infectious Diseases, Faculty of Epidemiology and Population Health, London School of Hygiene & Tropical Medicine, London, UK.
| | - Yalda Jafari
- Mahidol Oxford Tropical Medicine Research Unit, Faculty of Tropical Medicine, Mahidol University, Bangkok, Thailand
- Centre for Tropical Medicine and Global Health, Nuffield Department of Medicine, University of Oxford, Oxford, UK
| | - Jamie M Caldwell
- High Meadows Environmental Institute, Princeton University, Princeton, NJ, USA
| | - Hannah E Clapham
- Saw Swee Hock School of Public Health, National University of Singapore and National University Health System, Singapore, Singapore
| | - Katy A M Gaythorpe
- MRC Centre for Global Infectious Disease Analysis, School of Public Health, Imperial College London, London, UK
| | - Laith Hussain-Alkhateeb
- School of Public Health and Community Medicine, Sahlgrenska Academy, Institute of Medicine, Global Health, University of Gothenburg, Gothenburg, Sweden
- Population Health Research Section, King Abdullah International Medical Research Center, Riyadh, Saudi Arabia
| | - Michael A Johansson
- Dengue Branch, Division of Vector-Borne Diseases, Centers for Disease Control and Prevention, San Juan, Puerto Rico, USA
| | | | - Richard J Maude
- Mahidol Oxford Tropical Medicine Research Unit, Faculty of Tropical Medicine, Mahidol University, Bangkok, Thailand
- Centre for Tropical Medicine and Global Health, Nuffield Department of Medicine, University of Oxford, Oxford, UK
| | - Clare P McCormack
- MRC Centre for Global Infectious Disease Analysis, School of Public Health, Imperial College London, London, UK
| | - Jane P Messina
- School of Geography and the Environment, University of Oxford, Oxford, UK
- Oxford School of Global and Area Studies, University of Oxford, Oxford, UK
| | - Erin A Mordecai
- Department of Biology, Stanford University, Stanford, CA, USA
| | - Ingrid B Rabe
- Department of Epidemic and Pandemic Preparedness and Prevention, World Health Organization, Geneva, Switzerland
| | - Robert C Reiner
- Institute for Health Metrics and Evaluation, University of Washington, Seattle, WA, USA
- Department of Health Metrics Sciences, School of Medicine, University of Washington, Seattle, WA, USA
| | - Sadie J Ryan
- Department of Geography and Emerging Pathogens Institute, University of Florida, Gainesville, FL, USA
| | - Henrik Salje
- Department of Genetics, University of Cambridge, Cambridge, UK
| | - Jan C Semenza
- Department of Public Health and Clinical Medicine, Section of Sustainable Health, Umeå University, Umeå, Sweden
| | - Diana P Rojas
- Department of Epidemic and Pandemic Preparedness and Prevention, World Health Organization, Geneva, Switzerland
| | - Oliver J Brady
- Department of Infectious Disease Epidemiology and Dynamics, Faculty of Epidemiology and Population Health, London School of Hygiene & Tropical Medicine, London, UK
- Centre for Mathematical Modelling of Infectious Diseases, Faculty of Epidemiology and Population Health, London School of Hygiene & Tropical Medicine, London, UK
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Areed WD, Price A, Arnett K, Thompson H, Malseed R, Mengersen K. Assessing the spatial structure of the association between attendance at preschool and children's developmental vulnerabilities in Queensland, Australia. PLoS One 2023; 18:e0285409. [PMID: 37556459 PMCID: PMC10411799 DOI: 10.1371/journal.pone.0285409] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/30/2022] [Accepted: 04/22/2023] [Indexed: 08/11/2023] Open
Abstract
Demographic and educational factors are essential, influential factors of early childhood development. This study aimed to investigate spatial patterns in the association between attendance at preschool and children's developmental vulnerabilities in one or more domain(s) in their first year of full-time school at a small area level in Queensland, Australia. This was achieved by applying geographically weighted regression (GWR) followed by K-means clustering of the regression coefficients. Three distinct geographical clusters were found in Queensland using the GWR coefficients. The first cluster covered more than half of the state of Queensland, including the Greater Brisbane region, and displays a strong negative association between developmental vulnerabilities and attendance at preschool. That is, areas with high proportions of preschool attendance tended to have lower proportions of children with at least one developmental vulnerability in the first year of full-time school. Clusters two and three were characterized by stronger negative associations between developmental vulnerabilities, English as the mother language, and geographic remoteness, respectively. This research provides evidence of the need for collaboration between health and education sectors in specific regions of Queensland to update current service provision policies and to ensure holistic and appropriate care is available to support children with developmental vulnerabilities.
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Affiliation(s)
- Wala Draidi Areed
- School of Mathematical Science, Center for Data Science, Queensland University of Technology, Queensland, Australia
| | - Aiden Price
- School of Mathematical Science, Center for Data Science, Queensland University of Technology, Queensland, Australia
| | | | - Helen Thompson
- School of Mathematical Science, Center for Data Science, Queensland University of Technology, Queensland, Australia
| | - Reid Malseed
- Children’s Health Queensland, Queensland, Australia
| | - Kerrie Mengersen
- School of Mathematical Science, Center for Data Science, Queensland University of Technology, Queensland, Australia
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Solimini A, Virgillito C, Manica M, Poletti P, Guzzetta G, Marini G, Rosà R, Filipponi F, Scognamiglio P, Vairo F, Caputo B. How habitat factors affect an Aedes mosquitoes driven outbreak at temperate latitudes: The case of the Chikungunya virus in Italy. PLoS Negl Trop Dis 2023; 17:e0010655. [PMID: 37590255 PMCID: PMC10465128 DOI: 10.1371/journal.pntd.0010655] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/13/2022] [Revised: 08/29/2023] [Accepted: 07/27/2023] [Indexed: 08/19/2023] Open
Abstract
BACKGROUND Outbreaks of Aedes-borne diseases in temperate areas are not frequent, and limited in number of cases. We investigate the associations between habitat factors and temperature on individuals' risk of chikungunya (CHIKV) in a non-endemic area by spatially analyzing the data from the 2017 Italian outbreak. METHODOLOGY/PRINCIPAL FINDINGS We adopted a case-control study design to analyze the association between land-cover variables, temperature, and human population density with CHIKV cases. The observational unit was the area, at different scales, surrounding the residence of each CHIKV notified case. The statistical analysis was conducted considering the whole dataset and separately for the resort town of Anzio and the metropolitan city of Rome, which were the two main foci of the outbreak. In Rome, a higher probability for the occurrence of CHIKV cases is associated with lower temperature (OR = 0.72; 95% CI: 0.61-0.85) and with cells with higher vegetation coverage and human population density (OR = 1.03; 95% CI: 1.00-1.05). In Anzio, CHIKV case occurrence was positively associated with human population density (OR = 1.03; 95% CI: 1.00-1.06) but not with habitat factors or temperature. CONCLUSION/SIGNIFICANCE Using temperature, human population density and vegetation coverage data as drives for CHIKV transmission, our estimates could be instrumental in assessing spatial heterogeneity in the risk of experiencing arboviral diseases in non-endemic temperate areas.
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Affiliation(s)
- Angelo Solimini
- Departement of Public Health and Infectious Diseases, Sapienza Università di Roma, Roma, Italy
| | - Chiara Virgillito
- Departement of Public Health and Infectious Diseases, Sapienza Università di Roma, Roma, Italy
| | - Mattia Manica
- Center for Health Emergencies, Fondazione Bruno Kessler, Trento, Italy
| | - Piero Poletti
- Center for Health Emergencies, Fondazione Bruno Kessler, Trento, Italy
| | - Giorgio Guzzetta
- Center for Health Emergencies, Fondazione Bruno Kessler, Trento, Italy
| | - Giovanni Marini
- Research and Innovation Centre, Fondazione Edmund Mach, San Michele all’Adige (TN), Italy
| | - Roberto Rosà
- Research and Innovation Centre, Fondazione Edmund Mach, San Michele all’Adige (TN), Italy
- Center Agriculture Food Environment, Università di Trento, San Michele all’Adige (TN), Italy
| | - Federico Filipponi
- Institute for Environmental Protection and Research (ISPRA), Roma, Italy
| | - Paola Scognamiglio
- Regional Service for Surveillance and Control of Infectious Diseases (SERESMI)—Lazio Region, National Institute for Infectious Diseases "Lazzaro Spallanzani" IRCCS, Rome, Italy
| | - Francesco Vairo
- Regional Service for Surveillance and Control of Infectious Diseases (SERESMI)—Lazio Region, National Institute for Infectious Diseases "Lazzaro Spallanzani" IRCCS, Rome, Italy
| | - Beniamino Caputo
- Departement of Public Health and Infectious Diseases, Sapienza Università di Roma, Roma, Italy
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Motlogeloa O, Fitchett JM. Climate and human health: a review of publication trends in the International Journal of Biometeorology. INTERNATIONAL JOURNAL OF BIOMETEOROLOGY 2023:10.1007/s00484-023-02466-8. [PMID: 37129619 PMCID: PMC10153057 DOI: 10.1007/s00484-023-02466-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/30/2022] [Revised: 03/06/2023] [Accepted: 03/27/2023] [Indexed: 05/03/2023]
Abstract
The climate-health nexus is well documented in the field of biometeorology. Since its inception, Biometeorology has in many ways become the umbrella under which much of this collaborative research has been conducted. Whilst a range of review papers have considered the development of biometeorological research and its coverage in this journal, and a few have reviewed the literature on specific diseases, none have focused on the sub-field of climate and health as a whole. Since its first issue in 1957, the International Journal of Biometeorology has published a total of 2183 papers that broadly consider human health and its relationship with climate. In this review, we identify a total of 180 (8.3%, n = 2183) of these papers that specifically focus on the intersection between meteorological variables and specific, named diagnosable diseases, and explore the publication trends thereof. The number of publications on climate and health in the journal increases considerably since 2011. The largest number of publications on the topic was in 2017 (18) followed by 2021 (17). Of the 180 studies conducted, respiratory diseases accounted for 37.2% of the publications, cardiovascular disease 17%, and cerebrovascular disease 11.1%. The literature on climate and health in the journal is dominated by studies from the global North, with a particular focus on Asia and Europe. Only 2.2% and 8.3% of these studies explore empirical evidence from the African continent and South America respectively. These findings highlight the importance of continued research on climate and human health, especially in low- and lower-middle-income countries, the populations of which are more vulnerable to climate-sensitive illnesses.
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Affiliation(s)
- Ogone Motlogeloa
- School of Geography, Archaeology and Environmental Studies, University of the Witwatersrand, Johannesburg, South Africa
| | - Jennifer M Fitchett
- School of Geography, Archaeology and Environmental Studies, University of the Witwatersrand, Johannesburg, South Africa.
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Tangena JAA, Mategula D, Sedda L, Atkinson PM. Unravelling the impact of insecticide-treated bed nets on childhood malaria in Malawi. Malar J 2023; 22:16. [PMID: 36635658 PMCID: PMC9837906 DOI: 10.1186/s12936-023-04448-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/16/2022] [Accepted: 01/06/2023] [Indexed: 01/14/2023] Open
Abstract
BACKGROUND To achieve malaria elimination it is essential to understand the impact of insecticide-treated net (ITNs) programmes. Here, the impact of ITN access and use on malaria prevalence in children in Malawi was investigated using Malaria Indicator Survey (MIS) data. METHODS MIS data from 2012, 2014 and 2017 were used to investigate the relationship between malaria prevalence in children (6-59 months) and ITN use. Generalized linear modelling (GLM), geostatistical mixed regression modelling and non-stationary GLM were undertaken to evaluate trends, spatial patterns and local dynamics, respectively. RESULTS Malaria prevalence in Malawi was 27.1% (95% CI 23.1-31.2%) in 2012 and similar in both 2014 (32.1%, 95% CI 25.5-38.7) and 2017 (23.9%, 95% CI 20.3-27.4%). ITN coverage and use increased during the same time period, with household ITN access growing from 19.0% (95% CI 15.6-22.3%) of households with at least 1 ITN for every 2 people sleeping in the house the night before to 41.7% (95% CI 39.1-44.4%) and ITN use from 41.1% (95% CI 37.3-44.9%) of the population sleeping under an ITN the previous night to 57.4% (95% CI 55.0-59.9%). Both the geostatistical and non-stationary GLM regression models showed child malaria prevalence had a negative association with ITN population access and a positive association with ITN use although affected by large uncertainties. The non-stationary GLM highlighted the spatital heterogeneity in the relationship between childhood malaria and ITN dynamics across the country. CONCLUSION Malaria prevalence in children under five had a negative association with ITN population access and a positive association with ITN use, with spatial heterogeneity in these relationships across Malawi. This study presents an important modelling approach that allows malaria control programmes to spatially disentangle the impact of interventions on malaria cases.
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Affiliation(s)
- Julie-Anne A. Tangena
- grid.48004.380000 0004 1936 9764Vector Biology Department, Liverpool School of Tropical Medicine, Liverpool, UK
| | - Donnie Mategula
- grid.48004.380000 0004 1936 9764Vector Biology Department, Liverpool School of Tropical Medicine, Liverpool, UK ,grid.419393.50000 0004 8340 2442Malawi-Liverpool Wellcome Trust Clinical Research Programme, Blantyre, Malawi
| | - Luigi Sedda
- grid.9835.70000 0000 8190 6402Lancaster Ecology and Epidemiology Group, Lancaster University, Lancaster, UK
| | - Peter M. Atkinson
- grid.9835.70000 0000 8190 6402Lancaster Environment Centre, Lancaster University, Bailrigg, Lancaster, LA1 4YR UK ,grid.5491.90000 0004 1936 9297Geography and Environmental Science, University of Southampton, Highfield, Southampton, SO17 1BJ UK ,grid.9227.e0000000119573309Institute of Geographic Sciences and Natural Resources Research, Chinese Academy of Sciences, 11A Datun Road, Beijing, 100101 China
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Yin S, Ren C, Shi Y, Hua J, Yuan HY, Tian LW. A Systematic Review on Modeling Methods and Influential Factors for Mapping Dengue-Related Risk in Urban Settings. INTERNATIONAL JOURNAL OF ENVIRONMENTAL RESEARCH AND PUBLIC HEALTH 2022; 19:ijerph192215265. [PMID: 36429980 PMCID: PMC9690886 DOI: 10.3390/ijerph192215265] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/18/2022] [Revised: 11/11/2022] [Accepted: 11/17/2022] [Indexed: 05/12/2023]
Abstract
Dengue fever is an acute mosquito-borne disease that mostly spreads within urban or semi-urban areas in warm climate zones. The dengue-related risk map is one of the most practical tools for executing effective control policies, breaking the transmission chain, and preventing disease outbreaks. Mapping risk at a small scale, such as at an urban level, can demonstrate the spatial heterogeneities in complicated built environments. This review aims to summarize state-of-the-art modeling methods and influential factors in mapping dengue fever risk in urban settings. Data were manually extracted from five major academic search databases following a set of querying and selection criteria, and a total of 28 studies were analyzed. Twenty of the selected papers investigated the spatial pattern of dengue risk by epidemic data, whereas the remaining eight papers developed an entomological risk map as a proxy for potential dengue burden in cities or agglomerated urban regions. The key findings included: (1) Big data sources and emerging data-mining techniques are innovatively employed for detecting hot spots of dengue-related burden in the urban context; (2) Bayesian approaches and machine learning algorithms have become more popular as spatial modeling tools for predicting the distribution of dengue incidence and mosquito presence; (3) Climatic and built environmental variables are the most common factors in making predictions, though the effects of these factors vary with the mosquito species; (4) Socio-economic data may be a better representation of the huge heterogeneity of risk or vulnerability spatial distribution on an urban scale. In conclusion, for spatially assessing dengue-related risk in an urban context, data availability and the purpose for mapping determine the analytical approaches and modeling methods used. To enhance the reliabilities of predictive models, sufficient data about dengue serotyping, socio-economic status, and spatial connectivity may be more important for mapping dengue-related risk in urban settings for future studies.
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Affiliation(s)
- Shi Yin
- Faculty of Architecture, The University of Hong Kong, Pokfulam, Hong Kong SAR, China
- School of Architecture, South China University of Technology, Guangzhou 510641, China
| | - Chao Ren
- Faculty of Architecture, The University of Hong Kong, Pokfulam, Hong Kong SAR, China
- Correspondence:
| | - Yuan Shi
- Department of Geography and Planning, University of Liverpool, Liverpool L69 3BX, UK
| | - Junyi Hua
- School of International Affairs and Public Administration, Ocean University of China, Qingdao 266100, China
| | - Hsiang-Yu Yuan
- Department of Biomedical Sciences, City University of Hong Kong, Kowloon, Hong Kong SAR, China
| | - Lin-Wei Tian
- School of Public Health, LKS Faculty of Medicine, The University of Hong Kong, Pokfulam, Hong Kong SAR, China
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Integrating Spatial Modelling and Space-Time Pattern Mining Analytics for Vector Disease-Related Health Perspectives: A Case of Dengue Fever in Pakistan. INTERNATIONAL JOURNAL OF ENVIRONMENTAL RESEARCH AND PUBLIC HEALTH 2021; 18:ijerph182212018. [PMID: 34831785 PMCID: PMC8618682 DOI: 10.3390/ijerph182212018] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 08/20/2021] [Revised: 10/31/2021] [Accepted: 11/10/2021] [Indexed: 11/17/2022]
Abstract
The spatial–temporal assessment of vector diseases is imperative to design effective action plans and establish preventive strategies. Therefore, such assessments have potential public health planning-related implications. In this context, we here propose an integrated spatial disease evaluation (I-SpaDE) framework. The I-SpaDE integrates various techniques such as the Kernel Density Estimation, the Optimized Hot Spot Analysis, space–time assessment and prediction, and the Geographically Weighted Regression (GWR). It makes it possible to systematically assess the disease concentrations, patterns/trends, clustering, prediction dynamics, and spatially varying relationships between disease and different associated factors. To demonstrate the applicability and effectiveness of the I-SpaDE, we apply it in the second largest city of Pakistan, namely Lahore, using Dengue Fever (DF) during 2007–2016 as an example vector disease. The most significant clustering is evident during the years 2007–2008, 2010–2011, 2013, and 2016. Mostly, the clusters are found within the city’s central functional area. The prediction analysis shows an inclination of DF distribution from less to more urbanized areas. The results from the GWR show that among various socio-ecological factors, the temperature is the most significantly associated with the DF followed by vegetation and built-up area. While the results are important to understand the DF situation in the study area and have useful implications for public health planning, the proposed framework is flexible, replicable, and robust to be utilized in other similar regions, particularly in developing countries in the tropics and sub-tropics.
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Gao P, Pilot E, Rehbock C, Gontariuk M, Doreleijers S, Wang L, Krafft T, Martens P, Liu Q. Land use and land cover change and its impacts on dengue dynamics in China: A systematic review. PLoS Negl Trop Dis 2021; 15:e0009879. [PMID: 34669704 PMCID: PMC8559955 DOI: 10.1371/journal.pntd.0009879] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/08/2021] [Revised: 11/01/2021] [Accepted: 10/05/2021] [Indexed: 12/29/2022] Open
Abstract
Background Dengue is a prioritized public health concern in China. Because of the larger scale, more frequent and wider spatial distribution, the challenge for dengue prevention and control has increased in recent years. While land use and land cover (LULC) change was suggested to be associated with dengue, relevant research has been quite limited. The “Open Door” policy introduced in 1978 led to significant LULC change in China. This systematic review is the first to review the studies on the impacts of LULC change on dengue dynamics in China. This review aims at identifying the research evidence, research gaps and provide insights for future research. Methods A systematic literature review was conducted following the PRISMA protocol. The combinations of search terms on LULC, dengue and its vectors were searched in the databases PubMed, Web of Science, and Baidu Scholar. Research conducted on China published from 1978 to December 2019 and written in English or Chinese was selected for further screening. References listed in articles meeting the inclusion criteria were also reviewed and included if again inclusion criteria were met to minimize the probability of missing relevant research. Results 28 studies published between 1978 and 2017 were included for the full review. Guangdong Province and southern Taiwan were the major regional foci in the literature. The majority of the reviewed studies observed associations between LULC change factors and dengue incidence and distribution. Conflictive evidence was shown in the studies about the impacts of green space and blue space on dengue in China. Transportation infrastructure and urbanization were repeatedly suggested to be positively associated with dengue incidence and spread. The majority of the studies reviewed considered meteorological and sociodemographic factors when they analyzed the effects of LULC change on dengue. Primary and secondary remote sensing (RS) data were the primary source for LULC variables. In 21 of 28 studies, a geographic information system (GIS) was used to process data of environmental variables and dengue cases and to perform spatial analysis of dengue. Conclusions The effects of LULC change on the dynamics of dengue in China varied in different periods and regions. The application of RS and GIS enriches the means and dimensions to explore the relations between LULC change and dengue. Further comprehensive regional research is necessary to assess the influence of LULC change on local dengue transmission to provide practical advice for dengue prevention and control. Dengue is a major public health concern in China. The rapid development of urbanization along with climate change increases the challenge for dengue prevention and control. Previous research has mainly focused on the meteorological variables whereas land use and land cover (LULC) change received comparatively less attention. Our review identified that the regional research hotspots of dengue epidemics in China were Guangdong Province and southern Taiwan. Though inconsistent, most included studies somehow observed associations between at least one of the LULC change factors and dengue. A geographical information system (GIS) was widely used to perform spatial analysis in the selected literature. Its application provided a novel view to describe the relationships between environmental factors and the situation of dengue, which enabled scholars to explore more characteristics of dengue transmission. Meanwhile, the use of remote sensing (RS) enriched the means of environmental monitoring. However, there are research gaps in the area of dengue and LULC change, such as the less consideration of dengue vector study, the lack of interplays between factors, and the lack of considering interventions and policies. Furthermore, because of different research settings, results from these studies were difficult to compare. Thus, further comprehensive and comparable investigations are necessary to better understand the effects of LULC change on dengue in China. This review is the first to expound the studies on the associations between LULC change and dengue dynamics in China. It demonstrates the findings and methodologies and provided insights for future research.
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Affiliation(s)
- Panjun Gao
- Department of Health, Ethics & Society, CAPHRI Care and Public Health Research Institute, Faculty of Health, Medicine and Life Sciences, Maastricht University, Maastricht, The Netherlands
| | - Eva Pilot
- Department of Health, Ethics & Society, CAPHRI Care and Public Health Research Institute, Faculty of Health, Medicine and Life Sciences, Maastricht University, Maastricht, The Netherlands
| | - Cassandra Rehbock
- Department of Health, Ethics & Society, CAPHRI Care and Public Health Research Institute, Faculty of Health, Medicine and Life Sciences, Maastricht University, Maastricht, The Netherlands
| | - Marie Gontariuk
- Department of Health, Ethics & Society, CAPHRI Care and Public Health Research Institute, Faculty of Health, Medicine and Life Sciences, Maastricht University, Maastricht, The Netherlands
| | - Simone Doreleijers
- Department of Health, Ethics & Society, CAPHRI Care and Public Health Research Institute, Faculty of Health, Medicine and Life Sciences, Maastricht University, Maastricht, The Netherlands
| | - Li Wang
- Key Laboratory of Land Surface Pattern and Simulation, Institute of Geographical Sciences and Natural Resources Research, Chinese Academy of Sciences, Beijing, China
| | - Thomas Krafft
- Department of Health, Ethics & Society, CAPHRI Care and Public Health Research Institute, Faculty of Health, Medicine and Life Sciences, Maastricht University, Maastricht, The Netherlands
| | - Pim Martens
- Maastricht Sustainability Institute (MSI), Maastricht University, Maastricht, The Netherlands
| | - Qiyong Liu
- State Key Laboratory of Infectious Disease Prevention and Control, Collaborative Innovation Center for Diagnosis and Treatment of Infectious Diseases, National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing, China
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10
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Zafar S, Shipin O, Paul RE, Rocklöv J, Haque U, Rahman MS, Mayxay M, Pientong C, Aromseree S, Poolphol P, Pongvongsa T, Vannavong N, Overgaard HJ. Development and Comparison of Dengue Vulnerability Indices Using GIS-Based Multi-Criteria Decision Analysis in Lao PDR and Thailand. INTERNATIONAL JOURNAL OF ENVIRONMENTAL RESEARCH AND PUBLIC HEALTH 2021; 18:9421. [PMID: 34502007 PMCID: PMC8430616 DOI: 10.3390/ijerph18179421] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 08/04/2021] [Revised: 08/27/2021] [Accepted: 08/31/2021] [Indexed: 11/17/2022]
Abstract
Dengue is a continuous health burden in Laos and Thailand. We assessed and mapped dengue vulnerability in selected provinces of Laos and Thailand using multi-criteria decision approaches. An ecohealth framework was used to develop dengue vulnerability indices (DVIs) that explain links between population, social and physical environments, and health to identify exposure, susceptibility, and adaptive capacity indicators. Three DVIs were constructed using two objective approaches, Shannon's Entropy (SE) and the Water-Associated Disease Index (WADI), and one subjective approach, the Best-Worst Method (BWM). Each DVI was validated by correlating the index score with dengue incidence for each spatial unit (district and subdistrict) over time. A Pearson's correlation coefficient (r) larger than 0.5 and a p-value less than 0.05 implied a good spatial and temporal performance. Spatially, DVIWADI was significantly correlated on average in 19% (4-40%) of districts in Laos (mean r = 0.5) and 27% (15-53%) of subdistricts in Thailand (mean r = 0.85). The DVISE was validated in 22% (12-40%) of districts in Laos and in 13% (3-38%) of subdistricts in Thailand. The DVIBWM was only developed for Laos because of lack of data in Thailand and was significantly associated with dengue incidence on average in 14% (0-28%) of Lao districts. The DVIWADI indicated high vulnerability in urban centers and in areas with plantations and forests. In 2019, high DVIWADI values were observed in sparsely populated areas due to elevated exposure, possibly from changes in climate and land cover, including urbanization, plantations, and dam construction. Of the three indices, DVIWADI was the most suitable vulnerability index for the study area. The DVIWADI can also be applied to other water-associated diseases, such as Zika and chikungunya, to highlight priority areas for further investigation and as a tool for prevention and interventions.
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Affiliation(s)
- Sumaira Zafar
- Department of Environmental Engineering and Management, Asian Institute of Technology; Pathumthani 12120, Thailand;
| | - Oleg Shipin
- Department of Environmental Engineering and Management, Asian Institute of Technology; Pathumthani 12120, Thailand;
| | - Richard E. Paul
- Unité de la Génétique Fonctionnelle des Maladies Infectieuses, Institut Pasteur, CNRS UMR 2000, 75015 Paris, France;
| | - Joacim Rocklöv
- Department of Public Health and Clinical Medicine, Umeå University, 90187 Umeå, Sweden;
| | - Ubydul Haque
- Department of Biostatistics and Epidemiology, University of North Texas Health Science Center, North Texas, Fort Worth, TX 76107, USA;
| | - Md. Siddikur Rahman
- Department of Microbiology, Faculty of Medicine, Khon Kaen University, Khon Kaen 40002, Thailand; (M.S.R.); (C.P.); (S.A.); (H.J.O.)
- Department of Statistics, Begum Rokeya University, Rangpur 5402, Bangladesh
| | - Mayfong Mayxay
- Institute of Research and Education Development (IRED), University of Health Sciences, Ministry of Health, Vientiane 43130, Laos;
- Lao-Oxford-Mahosot Hospital-Welcome Trust Research Unit (LOMWRU), Microbiology Laboratory, Mahosot Hospital, Vientiane 43130, Laos
- Centre for Tropical Medicine and Global Health, Nuffield Department of Clinical Medicine, Old Road Campus, University of Oxford, Oxford OX3 7LG, UK
| | - Chamsai Pientong
- Department of Microbiology, Faculty of Medicine, Khon Kaen University, Khon Kaen 40002, Thailand; (M.S.R.); (C.P.); (S.A.); (H.J.O.)
| | - Sirinart Aromseree
- Department of Microbiology, Faculty of Medicine, Khon Kaen University, Khon Kaen 40002, Thailand; (M.S.R.); (C.P.); (S.A.); (H.J.O.)
| | - Petchaboon Poolphol
- The Office of Disease Prevention and Control Region 10(th), Ubon Ratchathani 34000, Thailand;
| | | | | | - Hans J. Overgaard
- Department of Microbiology, Faculty of Medicine, Khon Kaen University, Khon Kaen 40002, Thailand; (M.S.R.); (C.P.); (S.A.); (H.J.O.)
- Faculty of Science and Technology, Norwegian University of Life Sciences, P.O. Box 5003, 1430 Ås, Norway
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11
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Lee SA, Jarvis CI, Edmunds WJ, Economou T, Lowe R. Spatial connectivity in mosquito-borne disease models: a systematic review of methods and assumptions. J R Soc Interface 2021; 18:20210096. [PMID: 34034534 PMCID: PMC8150046 DOI: 10.1098/rsif.2021.0096] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/02/2021] [Accepted: 04/26/2021] [Indexed: 12/14/2022] Open
Abstract
Spatial connectivity plays an important role in mosquito-borne disease transmission. Connectivity can arise for many reasons, including shared environments, vector ecology and human movement. This systematic review synthesizes the spatial methods used to model mosquito-borne diseases, their spatial connectivity assumptions and the data used to inform spatial model components. We identified 248 papers eligible for inclusion. Most used statistical models (84.2%), although mechanistic are increasingly used. We identified 17 spatial models which used one of four methods (spatial covariates, local regression, random effects/fields and movement matrices). Over 80% of studies assumed that connectivity was distance-based despite this approach ignoring distant connections and potentially oversimplifying the process of transmission. Studies were more likely to assume connectivity was driven by human movement if the disease was transmitted by an Aedes mosquito. Connectivity arising from human movement was more commonly assumed in studies using a mechanistic model, likely influenced by a lack of statistical models able to account for these connections. Although models have been increasing in complexity, it is important to select the most appropriate, parsimonious model available based on the research question, disease transmission process, the spatial scale and availability of data, and the way spatial connectivity is assumed to occur.
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Affiliation(s)
- Sophie A. Lee
- Centre for Mathematical Modelling of Infectious Diseases, London School of Hygiene & Tropical Medicine, London, UK
- Centre on Climate Change and Planetary Health, London School of Hygiene & Tropical Medicine, London, UK
- Department of Infectious Disease Epidemiology, London School of Hygiene & Tropical Medicine, London, UK
| | - Christopher I. Jarvis
- Centre for Mathematical Modelling of Infectious Diseases, London School of Hygiene & Tropical Medicine, London, UK
- Department of Infectious Disease Epidemiology, London School of Hygiene & Tropical Medicine, London, UK
| | - W. John Edmunds
- Centre for Mathematical Modelling of Infectious Diseases, London School of Hygiene & Tropical Medicine, London, UK
- Department of Infectious Disease Epidemiology, London School of Hygiene & Tropical Medicine, London, UK
| | | | - Rachel Lowe
- Centre for Mathematical Modelling of Infectious Diseases, London School of Hygiene & Tropical Medicine, London, UK
- Centre on Climate Change and Planetary Health, London School of Hygiene & Tropical Medicine, London, UK
- Department of Infectious Disease Epidemiology, London School of Hygiene & Tropical Medicine, London, UK
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12
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Yang D, Yang A, Yang J, Xu R, Qiu H. Unprecedented Migratory Bird Die-Off: A Citizen-Based Analysis on the Spatiotemporal Patterns of Mass Mortality Events in the Western United States. GEOHEALTH 2021; 5:e2021GH000395. [PMID: 33855250 PMCID: PMC8029984 DOI: 10.1029/2021gh000395] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 02/03/2021] [Revised: 02/26/2021] [Accepted: 03/01/2021] [Indexed: 06/12/2023]
Abstract
Extensive, severe wildfires, and wildfire-induced smoke occurred across the western and central United States since August 2020. Wildfires resulting in the loss of habitats and emission of particulate matter and volatile organic compounds pose serious threatens to wildlife and human populations, especially for avian species, the respiratory system of which are sensitive to air pollutions. At the same time, the extreme weather (e.g., snowstorms) in late summer may also impact bird migration by cutting off their food supply and promoting their migration before they were physiologically ready. In this study, we investigated the environmental drivers of massive bird die-offs by combining socioecological earth observations data sets with citizen science observations. We employed the geographically weighted regression models to quantitatively evaluate the effects of different environmental and climatic drivers, including wildfire, air quality, extreme weather, drought, and land cover types, on the spatial pattern of migratory bird mortality across the western and central US during August-September 2020. We found that these drivers affected the death of migratory birds in different ways, among which air quality and distance to wildfire were two major drivers. Additionally, there were more bird mortality events found in urban areas and close to wildfire in early August. However, fewer bird deaths were detected closer to wildfires in California in late August and September. Our findings highlight the important impact of extreme weather and natural disasters on bird biology, survival, and migration, which can provide significant insights into bird biodiversity, conservation, and ecosystem sustainability.
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Affiliation(s)
- Di Yang
- Wyoming Geographic Information CenterUniversity of WyomingLaramieWYUSA
| | - Anni Yang
- Department of Fish, Wildlife, and Conservation BiologyColorado State UniversityFort CollinsCOUSA
- United States Department of Agriculture, Animal and Plant Health Inspection ServiceNational Wildlife Research CenterFort CollinsCOUSA
| | - Jue Yang
- Department of GeographyUniversity of GeorgiaAthensGAUSA
| | - Rongting Xu
- Forest Ecosystems and SocietyOregon State UniversityCorvallisORUSA
| | - Han Qiu
- Department of Forest and Wildlife EcologyUniversity of Wisconsin‐MadisonMadisonWIUSA
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13
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Tsheten T, Clements ACA, Gray DJ, Wangchuk S, Wangdi K. Spatial and temporal patterns of dengue incidence in Bhutan: a Bayesian analysis. Emerg Microbes Infect 2021; 9:1360-1371. [PMID: 32538299 PMCID: PMC7473275 DOI: 10.1080/22221751.2020.1775497] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2023]
Abstract
Dengue is an important emerging vector-borne disease in Bhutan. This study aimed to quantify the spatial and temporal patterns of dengue and their relationship to environmental factors in dengue-affected areas at the sub-district level. A multivariate zero-inflated Poisson regression model was developed using a Bayesian framework with spatial and spatiotemporal random effects modelled using a conditional autoregressive prior structure. The posterior parameters were estimated using Bayesian Markov Chain Monte Carlo simulation with Gibbs sampling. A total of 708 dengue cases were notified through national surveillance between January 2016 and June 2019. Individuals aged ≤14 years were found to be 53% (95% CrI: 42%, 62%) less likely to have dengue infection than those aged >14 years. Dengue cases increased by 63% (95% CrI: 49%, 77%) for a 1°C increase in maximum temperature, and decreased by 48% (95% CrI: 25%, 64%) for a one-unit increase in normalized difference vegetation index (NDVI). There was significant residual spatial clustering after accounting for climate and environmental variables. The temporal trend was significantly higher than the national average in eastern sub-districts. The findings highlight the impact of climate and environmental variables on dengue transmission and suggests prioritizing high-risk areas for control strategies.
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Affiliation(s)
- Tsheten Tsheten
- Department of Global Health, Research School of Population Health, Australian National University, Canberra, Australia.,Royal Centre for Disease Control, Ministry of Health, Thimphu, Bhutan
| | - Archie C A Clements
- Faculty of Health Sciences, Curtin University, Perth, Australia.,Telethon Kids Institute, Nedlands, Australia
| | - Darren J Gray
- Department of Global Health, Research School of Population Health, Australian National University, Canberra, Australia
| | - Sonam Wangchuk
- Royal Centre for Disease Control, Ministry of Health, Thimphu, Bhutan
| | - Kinley Wangdi
- Department of Global Health, Research School of Population Health, Australian National University, Canberra, Australia
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14
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Lee J, Kamenetsky ME, Gangnon RE, Zhu J. Clustered spatio-temporal varying coefficient regression model. Stat Med 2020; 40:465-480. [PMID: 33103247 DOI: 10.1002/sim.8785] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/28/2020] [Revised: 06/28/2020] [Accepted: 08/08/2020] [Indexed: 12/14/2022]
Abstract
In regression analysis for spatio-temporal data, identifying clusters of spatial units over time in a regression coefficient could provide insight into the unique relationship between a response and covariates in certain subdomains of space and time windows relative to the background in other parts of the spatial domain and the time period of interest. In this article, we propose a varying coefficient regression method for spatial data repeatedly sampled over time, with heterogeneity in regression coefficients across both space and over time. In particular, we extend a varying coefficient regression model for spatial-only data to spatio-temporal data with flexible temporal patterns. We consider the detection of a potential cylindrical cluster of regression coefficients based on testing whether the regression coefficient is the same or not over the entire spatial domain for each time point. For multiple clusters, we develop a sequential identification approach. We assess the power and identification of known clusters via a simulation study. Our proposed methodology is illustrated by the analysis of a cancer mortality dataset in the Southeast of the U.S.
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Affiliation(s)
- Junho Lee
- Statistics Program, CEMSE Division, King Abdullah University of Science and Technology, Thuwal, Saudi Arabia
| | - Maria E Kamenetsky
- Department of Population Health Sciences, University of Wisconsin-Madison, Madison, Wisconsin, USA
| | - Ronald E Gangnon
- Department of Population Health Sciences, University of Wisconsin-Madison, Madison, Wisconsin, USA.,Department of Biostatistics and Medical Informatics, University of Wisconsin-Madison, Madison, Wisconsin, USA
| | - Jun Zhu
- Department of Statistics, University of Wisconsin-Madison, Madison, Wisconsin, USA
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15
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Phuyal P, Kramer IM, Klingelhöfer D, Kuch U, Madeburg A, Groneberg DA, Wouters E, Dhimal M, Müller R. Spatiotemporal Distribution of Dengue and Chikungunya in the Hindu Kush Himalayan Region: A Systematic Review. INTERNATIONAL JOURNAL OF ENVIRONMENTAL RESEARCH AND PUBLIC HEALTH 2020; 17:E6656. [PMID: 32932665 PMCID: PMC7560004 DOI: 10.3390/ijerph17186656] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 07/09/2020] [Revised: 08/07/2020] [Accepted: 09/07/2020] [Indexed: 11/22/2022]
Abstract
The risk of increasing dengue (DEN) and chikungunya (CHIK) epidemics impacts 240 million people, health systems, and the economy in the Hindu Kush Himalayan (HKH) region. The aim of this systematic review is to monitor trends in the distribution and spread of DEN/CHIK over time and geographically for future reliable vector and disease control in the HKH region. We conducted a systematic review of the literature on the spatiotemporal distribution of DEN/CHIK in HKH published up to 23 January 2020, following Preferred Reporting Items for Systematic Reviews and Meta-Analysis (PRISMA) guidelines. In total, we found 61 articles that focused on the spatial and temporal distribution of 72,715 DEN and 2334 CHIK cases in the HKH region from 1951 to 2020. DEN incidence occurs in seven HKH countries, i.e., India, Nepal, Bhutan, Pakistan, Bangladesh, Afghanistan, and Myanmar, and CHIK occurs in four HKH countries, i.e., India, Nepal, Bhutan, and Myanmar, out of eight HKH countries. DEN is highly seasonal and starts with the onset of the monsoon (July in India and June in Nepal) and with the onset of spring (May in Bhutan) and peaks in the postmonsoon season (September to November). This current trend of increasing numbers of both diseases in many countries of the HKH region requires coordination of response efforts to prevent and control the future expansion of those vector-borne diseases to nonendemic areas, across national borders.
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Affiliation(s)
- Parbati Phuyal
- Institute of Occupational Medicine, Social Medicine and Environmental Medicine, Goethe University, 60590 Frankfurt am Main, Germany; (I.M.K.); (D.K.); (U.K.); (A.M.); (D.A.G.); (M.D.); (R.M.)
- Institute of Environment and Sustainable Development, University of Antwerp, 2000 Antwerp, Belgium
| | - Isabelle Marie Kramer
- Institute of Occupational Medicine, Social Medicine and Environmental Medicine, Goethe University, 60590 Frankfurt am Main, Germany; (I.M.K.); (D.K.); (U.K.); (A.M.); (D.A.G.); (M.D.); (R.M.)
| | - Doris Klingelhöfer
- Institute of Occupational Medicine, Social Medicine and Environmental Medicine, Goethe University, 60590 Frankfurt am Main, Germany; (I.M.K.); (D.K.); (U.K.); (A.M.); (D.A.G.); (M.D.); (R.M.)
| | - Ulrich Kuch
- Institute of Occupational Medicine, Social Medicine and Environmental Medicine, Goethe University, 60590 Frankfurt am Main, Germany; (I.M.K.); (D.K.); (U.K.); (A.M.); (D.A.G.); (M.D.); (R.M.)
| | - Axel Madeburg
- Institute of Occupational Medicine, Social Medicine and Environmental Medicine, Goethe University, 60590 Frankfurt am Main, Germany; (I.M.K.); (D.K.); (U.K.); (A.M.); (D.A.G.); (M.D.); (R.M.)
| | - David A. Groneberg
- Institute of Occupational Medicine, Social Medicine and Environmental Medicine, Goethe University, 60590 Frankfurt am Main, Germany; (I.M.K.); (D.K.); (U.K.); (A.M.); (D.A.G.); (M.D.); (R.M.)
| | - Edwin Wouters
- Department of Sociology, University of Antwerp, 2000 Antwerp, Belgium;
| | - Meghnath Dhimal
- Institute of Occupational Medicine, Social Medicine and Environmental Medicine, Goethe University, 60590 Frankfurt am Main, Germany; (I.M.K.); (D.K.); (U.K.); (A.M.); (D.A.G.); (M.D.); (R.M.)
- Health Research Section, Nepal Health Research Council, Ramshah Path, Kathmandu 44600, Nepal
| | - Ruth Müller
- Institute of Occupational Medicine, Social Medicine and Environmental Medicine, Goethe University, 60590 Frankfurt am Main, Germany; (I.M.K.); (D.K.); (U.K.); (A.M.); (D.A.G.); (M.D.); (R.M.)
- Unit Entomology, Institute of Tropical Medicine, 2000 Antwerp, Belgium
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16
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Li Z, Gurgel H, Dessay N, Hu L, Xu L, Gong P. Semi-Supervised Text Classification Framework: An Overview of Dengue Landscape Factors and Satellite Earth Observation. INTERNATIONAL JOURNAL OF ENVIRONMENTAL RESEARCH AND PUBLIC HEALTH 2020; 17:E4509. [PMID: 32585932 PMCID: PMC7344967 DOI: 10.3390/ijerph17124509] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 06/01/2020] [Revised: 06/17/2020] [Accepted: 06/18/2020] [Indexed: 12/29/2022]
Abstract
In recent years there has been an increasing use of satellite Earth observation (EO) data in dengue research, in particular the identification of landscape factors affecting dengue transmission. Summarizing landscape factors and satellite EO data sources, and making the information public are helpful for guiding future research and improving health decision-making. In this case, a review of the literature would appear to be an appropriate tool. However, this is not an easy-to-use tool. The review process mainly includes defining the topic, searching, screening at both title/abstract and full-text levels and data extraction that needs consistent knowledge from experts and is time-consuming and labor intensive. In this context, this study integrates the review process, text scoring, active learning (AL) mechanism, and bidirectional long short-term memory (BiLSTM) networks, and proposes a semi-supervised text classification framework that enables the efficient and accurate selection of the relevant articles. Specifically, text scoring and BiLSTM-based active learning were used to replace the title/abstract screening and full-text screening, respectively, which greatly reduces the human workload. In this study, 101 relevant articles were selected from 4 bibliographic databases, and a catalogue of essential dengue landscape factors was identified and divided into four categories: land use (LU), land cover (LC), topography and continuous land surface features. Moreover, various satellite EO sensors and products used for identifying landscape factors were tabulated. Finally, possible future directions of applying satellite EO data in dengue research in terms of landscape patterns, satellite sensors and deep learning were proposed. The proposed semi-supervised text classification framework was successfully applied in research evidence synthesis that could be easily applied to other topics, particularly in an interdisciplinary context.
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Affiliation(s)
- Zhichao Li
- Ministry of Education Key Laboratory for Earth System Modeling, Department of Earth System, Science, Tsinghua University, Beijing 100084, China; (Z.L.); (L.X.)
| | - Helen Gurgel
- Department of Geography, University of Brasilia (UnB), Brasilia CEP 70910-900, Brazil;
- International Joint Laboratory Sentinela, FIOCRUZ, UnB, IRD, Rio de Janeiro RJ-21040-900, Brazil;
| | - Nadine Dessay
- International Joint Laboratory Sentinela, FIOCRUZ, UnB, IRD, Rio de Janeiro RJ-21040-900, Brazil;
- IRD, UM, UR, UG, UA, UMR ESPACE-DEV, 34090 Montpellier, France
| | - Luojia Hu
- Qian Xuesen Laboratory of Space Technology, China Academy of Space Technology, Beijing 100094, China;
| | - Lei Xu
- Ministry of Education Key Laboratory for Earth System Modeling, Department of Earth System, Science, Tsinghua University, Beijing 100084, China; (Z.L.); (L.X.)
| | - Peng Gong
- Ministry of Education Key Laboratory for Earth System Modeling, Department of Earth System, Science, Tsinghua University, Beijing 100084, China; (Z.L.); (L.X.)
- Center for Healthy Cities, Institute for China Sustainable Urbanization, Tsinghua University, Beijing 100084, China
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17
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The Irrigation Cooling Effect as a Climate Regulation Service of Agroecosystems. WATER 2020. [DOI: 10.3390/w12061553] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
Abstract
Agroecosystems provide a range of benefits to society and the economy, which we call ecosystem services (ES). These services can be evaluated on the basis of environmental and socioeconomic indicators. The irrigation cooling effect (ICE), given its influence on the land surface temperature (LST), is an indicator of climate regulation services from agroecosystems. In this context, the objective of this study is to quantify the ICE in agroecosystems at the local scale. The agroecosystem of citrus cultivation in Campo de Cartagena (Murcia, Spain) is used as a case study. Once the LST was retrieved by remote sensing images for 216 plots, multivariate regression methods were used to identify the factors that explain ICE. The use of a geographically weighted regression (GWR) model is proposed, instead of ordinary least squares, as it offsets the spatial dependence and gives a better fit. The GWR explains 78% of the variability in the LST, by means of three variables: the vegetation index, the water index of the crop, and the altitude. Thus, the effects of the change in land use on the LST due to restrictions on the availability of water (up to 1.22 °C higher for rain-fed crops) are estimated. The trade-offs between ICE and the other ES are investigated by using the irrigation water required to reduce the temperature. This work shows the magnitude of the climate regulation service generated by irrigated citrus and enables its quantification in agroecosystems with similar characteristics.
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18
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Dwivedi P, Huang D, Yu W, Nguyen Q. Predicting geographical variation in health-related quality of life. Prev Med 2019; 126:105742. [PMID: 31158399 PMCID: PMC6697589 DOI: 10.1016/j.ypmed.2019.05.030] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 02/05/2019] [Revised: 04/24/2019] [Accepted: 05/28/2019] [Indexed: 12/13/2022]
Abstract
Goods and services provided by businesses can either promote health or represent an additional risk factor. We assessed the association between business pattern indicators and the prevalence of adult obesity, diabetes, physical inactivity, fair or poor health and frequent physical and mental distress. Data on business types were obtained from the 2013 U.S. Census Bureau County Business Patterns. County health data were obtained from the Centers for Disease Control and Prevention Diabetes Interactive Atlas, Behavior Risk Factor Surveillance System and Fatality Analysis Reporting System. We explored the relationship at county level using the global (Ordinary Least Square regression) and local (Geographically Weighted Regression (GWR)) models in 3108 U.S. counties. Density of full service restaurants and fitness centers was associated with a significant decrease in adult obesity, diabetes, fair or poor health, physical inactivity, physical and mental distress. Conversely, density of payday loan centers was associated with an increase in these adverse health outcomes. However, our GWR models revealed substantial geographical variations in these relationships across the U.S. counties. Better understanding of the association between area-level structures and important health outcomes at the local level is important for developing targeted context-specific policy interventions. Full service restaurants and fitness centers may provide places for people to access higher quality food, socialize and exercise. Conversely, payday loans provide an expensive form of short-term credit and this debt may degrade an individual or family's ability to achieve or maintain health. Our study emphasizes the influence of local built environment characteristics on important health outcomes.
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Affiliation(s)
- Pallavi Dwivedi
- Department of Epidemiology and Biostatistics, University of Maryland School of Public Health, College Park, MD, United States.
| | - Dina Huang
- Department of Epidemiology and Biostatistics, University of Maryland School of Public Health, College Park, MD, United States
| | - Weijun Yu
- Department of Epidemiology and Biostatistics, University of Maryland School of Public Health, College Park, MD, United States
| | - Quynh Nguyen
- Department of Epidemiology and Biostatistics, University of Maryland School of Public Health, College Park, MD, United States
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19
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Yield Estimation of Paddy Rice Based on Satellite Imagery: Comparison of Global and Local Regression Models. REMOTE SENSING 2019. [DOI: 10.3390/rs11020111] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
Abstract
Precisely estimating the yield of paddy rice is crucial for national food security and development evaluation. Rice yield estimation based on satellite imagery is usually performed with global regression models; however, estimation errors may occur because the spatial variation is not considered. Therefore, this study proposed an approach estimating paddy rice yield based on global and local regression models. In our study area, the overall per-field data might not available because it took lots of time and manpower as well as resources. Therefore, we gathered and accumulated 26 to 63 ground survey sample fields, accounting for about 0.05% of the total cultivated areas, as the training samples for our regression models. To demonstrate whether the spatial autocorrelation or spatial heterogeneity exists and dominates the estimation, global models including the ordinary least squares (OLS), support vector regression (SVR), and the local model geographically weighted regression (GWR) were used to build the yield estimation models. We obtained the representative independent variables, including 4 original bands, 11 vegetation indices, and 32 texture indices, from SPOT-7 multispectral satellite imagery. To determine the optimal variable combination, feature selection based on the Pearson correlation was used for all of the regression models. The case study in Central Taiwan rendered that the error rate was between 0.06% and 13.22%. Through feature selection, the GWR model’s performance was more relatively stable than the OLS model and nonlinear SVR model for yield estimation. Where the GWR model considers the spatial autocorrelation and spatial heterogeneity of the relationships between the yield and the independent variables, the OLS and nonlinear SVR models lack this feature; this led to the rice yield estimation of GWR in this study be more stable than those of the other two models.
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