Soil organic matter as sole indicator of soil degradation

Potential impacts of polyethylene microplastics and heavy metals on Bidens pilosa L. growth: Shifts in root-associated endophyte microbial communities

This study investigates the impact of polyethylene (PE) microplastics of varying particle sizes and concentrations on the growth of Bidens pilosa L. and its root-associated microbial communities in cadmium (Cd) and lead (Pb) co-contaminated soil. PE microplastics had a significant impact on plant growth. Notably, at the P05-10 level, root length, root weight, and total biomass exhibited the greatest reductions by 48.9 %, 44.1 %, and 45.2 %, respectively. Furthermore, PE microplastics reduced photosynthetic pigment levels and promoted the accumulation of reactive oxygen species, as indicated by a 264.8 % and 57.2 % increase in H2O2 content in roots and leaves. High-throughput sequencing revealed substantial alterations in the composition of bacterial and fungal communities, with stress-resilient taxa such as Actinobacteria, Verrucomicrobiota, and Rhizophagus exhibiting increased relative abundance. Correlation analyses indicated that variations in soil pH and enzymatic activity influenced microbial community structure, which in turn affected plant physiological responses. Functional predictions using PICRUSt2 and BugBase suggested enhanced oxidative stress tolerance, increased secondary metabolite biosynthesis, and a higher prevalence of stress-resistant phenotypes under conditions of elevated PE concentrations and smaller particle sizes. Overall, this study provides novel insights into the potential effects of microplastics on Bidens pilosa L., particularly in its role as a hyperaccumulator, highlighting its capacity for heavy metal uptake under microplastic exposure.

Enhancing soil health through balanced fertilization: a pathway to sustainable agriculture and food security

Sustainable soil health management is pivotal for advancing agricultural productivity and ensuring global food security. This review comprehensively evaluates the effects of mineral-organic fertilizer ratios on soil microbial communities, enzymatic dynamics, functional gene abundance, and holistic soil health. By integrating bioinformatics, enzyme activity assays, and metagenomic analyses, we demonstrate that balanced fertilization significantly enhances microbial diversity, community stability, and functional resilience against environmental stressors. Specifically, the synergistic application of mineral and organic fertilizers elevates β-glucosidase and urease activities, accelerating organic matter decomposition and nutrient cycling while modulating microbial taxa critical for nutrient transformation and pathogen suppression. Notably, replacing 20-40% of mineral fertilizers with organic alternatives mitigates environmental risks such as greenhouse gas emissions and nutrient leaching while sustaining crop yields. This dual approach improves soil structure, boosts water and nutrient retention capacity, and increases microbial biomass by 20-30%, fostering long-term soil fertility. Field trials reveal yield increases of 25-40% in crops like rice and maize under combined fertilization, alongside enhanced soil organic carbon (110.6%) and nitrogen content (59.2%). The findings underscore the necessity of adopting region-specific, balanced fertilization strategies to optimize ecological sustainability and agricultural productivity. Future research should prioritize refining fertilization frameworks through interdisciplinary approaches, addressing soil-crop-climate interactions, and scaling these practices to diverse agroecosystems. By aligning agricultural policies with ecological principles, stakeholders can safeguard soil health-a cornerstone of environmental sustainability and human wellbeing-while securing resilient food systems for future generations.

Effect of Elaeagnus angustifolia Linn. on the Physicochemical Properties and Microbial Community Structure of Inter-Rhizosphere Soils

AIMS

The aim of this study was to elucidate the effect of Elaeagnus angustifolia Linn. (E. angustifolia L.) on the structure and abundance of the soil microbial community. This paper provides a theoretical foundation for guiding the establishment of E. angustifolia L. forests to enhance the physicochemical properties of soil.

METHODS

This study employed high-throughput sequencing technology to analyse the composition, diversity, and structural changes of various soil fungal and bacterial communities and correlated the results with soil physicochemical properties.

RESULTS

The results indicated a significant increase in the total nitrogen (0.66 g/kg-0.87 g/kg), ammonium nitrogen (3.60 mg/kg-6.56 mg/kg), and organic matter (1.06-1.38%) contents of the inter-rhizosphere soil of E. angustifolia L. after 3, 4, and 5 months of planting. Additionally, the total phosphorus, potassium, and nitrate nitrogen contents increased, whereas soil pH and salinity decreased. The abundance of soil microbial communities also increased. The fungal phyla with relative abundances greater than 1% were Ascomycota, Fungi_unclassified, Basidiomycota, Zygomycota, and Glomeromycota. Chytridiomycota, Rozellomycota, Mortierellomycota, and Olpidiomycota were not found in the bare soil control but were observed in the rhizosphere soil of the date palm. The relative abundance of bacteria from the phyla Proteobacteria, Acidobacteria, Actinobacteria, Gemmatimonadetes, and Chloroflexi in the inter-root soil of jujube dates showed an increase in comparison with the control group. At the same time, correlation analysis found that soil total phosphorus, nitrogen content, and soil enzyme activity were positively correlated with the bacterial level, with TN (p < 0.01) and NO3--N (p < 0.05) showing significant positive correlations. Conversely, soil pH and salinity were mostly negatively correlated with the fungi, and soil enzyme activity was significantly correlated with the fungal and bacterial at different RAD levels.

CONCLUSIONS

The introduction of E. angustifolia L. markedly affected the physicochemical properties and microbial community composition of the soil.

Response of soil organic carbon and soil aggregate stability to changes in land use patterns on the Loess Plateau

Land use change can significantly alter the proportion of soil aggregates, thereby influencing aggregate stability and distribution of soil organic carbon (SOC). However, there is minimal research on the variations in the distribution of soil aggregates, aggregate stability, and SOC in soil aggregates following land use change from farmland (FL) to forest and grassland in the Loess Plateau region of China. Select six land use patterns (farmland (FL), abandoned cropland (ACL), Medicago sativa (MS), natural grassland (NG), Picea asperata Mast. (PA), Platycladus orientalis (L.) Franco (PO)) on the Loess Plateau in China and collect undisturbed soil samples. These six land use patterns have similar geographical characteristics. The distribution of aggregates and the aggregate-associated SOC contents under the six land use patterns were measured at the 0-10 cm, 10-30 cm and 30-50 cm depths. The results showed that forestland and grasslands converted from FL significantly increased the aggregates (> 5 mm) content, mean weight diameter (MWD), and geometric mean diameter (GMD) but decreased the aggregates (< 0.25 mm) content. Compared with FL, the values at the 0-50 cm depth under PA, NG, MS, PO and ACL increased by 473.71-732.55%, 283.98-724.60%, 179.06-634.12%, 142.31-413.50% and 110.25-213.34%, respectively, for MWD and by 244.04-607.77%, 141.68-666.67%, 52.39-483.33%, 50.49-214.43%, and 35.23-64.29%, respectively, for GMD. Land use patterns and soil aggregate size had obvious influences on SOC content, SOC content in soil and aggregates decreased under ACL. In other forestland and grasslands, The SOC content in bulk soil, > 5 mm, 2-5 mm, 1-2 mm, 0.5-1 mm, 0.25-0.5 mm, and < 0.25 mm aggregates at the 0-50 cm depth after afforestation increased by 20.75-125.87%, 14.50-163.64%, - 11.86-118.18%, 9.65-150.95%, 38.28-126.49%, 51.26-165.87% and - 15.59-163.37%, respectively, Compared to FL. The contributions of different aggregates particle sizes to the increase in SOC content in bulk soil were 104.74%, 7.86%, 4.76%, 6.23%, 5.37%, and - 21.97%, respectively. MWD and GMD were positively correlated with SOC content in aggregates (1 mm), SOC content in bulk soil and aggregates. Although SOC content in bulk soil and different aggregates particle sizes under NG and PA were significantly higher that than under MS and PO, the soil macroaggregate content, MWD, and GMD under PO and NG were higher than that under PA and MS. These findings suggest that converted FL into PO and NG significantly improved soil structure and also increased SOC content. Therefore, in the process of transforming land use patterns on the Loess Plateau, the proportion of forest land and grassland should be appropriately increased to improve soil carbon storage and quality. The results of this study provides a theoretical basis and scientific basis for the scientific evaluation and understanding of soil organic carbon accumulation and distribution under different land use patterns in the Loess Plateau region of China.

Properties and environmental quality of the overburden and tailings of manganese mining in the Eastern Amazon

Knowledge about the characteristics of overburden and tailings from manganese (Mn) mining is essential for defining their levels of potentially toxic elements (PTEs) and appropriate environmental management. This study aimed to assess the total and bioavailable contents of PTEs in Mn mining areas in the Eastern Amazon, as well as the associated environmental risks. The samples were collected in areas of overburden and tailings deposition, in addition to forest soils in the Azul mine, Carajás Mineral Province, Brazil. These samples were characterized in terms of fertility, granulometry, and total and bioavailable PTE contents. The pH values of the forest soil were more acidic than those of the overburden and tailings, and the organic matter contents were considerably higher in the forest soil. All PTEs, especially Mn, Ba, Cu, Zn, and Pb, presented higher contents in the overburden and tailings. However, chemical fractionation revealed that PTEs were predominantly in the residual fraction, with percentage contents above 60% of the total content. These results suggest a low risk of environmental contamination. The findings of this study may support more efficient environmental rehabilitation in Mn mining areas in the Amazon.

Advances in Soil Amendments for Remediation of Heavy Metal-Contaminated Soils: Mechanisms, Impact, and Future Prospects

Heavy metal contamination is a critical factor contributing to soil degradation and poses significant environmental threats with profound implications for ecosystems and human health. Soil amendments have become an effective strategy to address these challenges by reducing heavy metal hazards and remediating contaminated soils. This review offers a comprehensive analysis of recent advancements in soil amendments for heavy metal-contaminated soils, with a focus on natural, synthetic, natural-synthetic copolymer, and biological amendments. By thoroughly examining and contrasting their remediation mechanisms and effects, this study provides a detailed evaluation of their influence on soil physicochemical properties, leachable heavy metal content, and microbial communities. Through bibliometric analysis, current research priorities and trends are highlighted, offering a multidimensional comparison of these amendments and clarifying their varying applicability and limitations. Furthermore, this review explores future prospects and the inherent challenges in soil amendments for heavy metal contamination, aiming to offer valuable insights and theoretical references for the development and selection of novel, efficient, multifunctional, environmentally friendly amendments.

Enhancement of root abscisic acid mediated osmotic regulation by macroalgal compounds promotes adaptability of rice (Oryza sativa L.) in response to progressive metal ion mediated environmental stress

Soil deterioration is a major cause of poor agricultural productivity, necessitating sufficient nutrient inputs like fertilizers and amendments for sustainable use. As one such strategy, the current study evaluates the potential of Sargassum wightii, a brown seaweed extract, as an osmopriming agent to improve seed germination, early establishment, and competent seedling performances in acidic soil. The elemental makeup of seaweed extract (BS) showed that it included major plant macro (Potassium, Nitrogen and Phosphorous), as well as micronutrients (Magnesium and Iron) and trace elements (Zinc, Copper, and Molybdenum). While seed germination was impacted by H+ ion toxicity, seeds primed with BS emerged earlier and showed a higher germination percentage (98.2%) and energy (92.4%). BS treatments enhanced seedling growth by 63% and had a positive effect on root growth (68.2%) as well as increases in root surface area (10%) and volume (67.01%). Stressed seedlings had 76.39% and 63.2% less carotenoid and chlorophyll, respectively. In seedlings treated with BS, an increase in protein and Total Soluble Sugars content of 14.56 and 7.19%, respectively, was seen. Fourier Transform-Infra Red analysis of postharvest soil indicated improved soil health with absorbance corresponding to enhanced soil water holding capacity and organic matter. Increased abscisic acid synthesis rate and associated antioxidant enzyme system (Malondialdehyde, Glutathione peroxidases and ascorbate peroxidase) activation, along with enhanced H+ adenosine triphosphate-ase and glutathione activities, help ameliorate and deport H+ ions from cells, scavenge Reactive Oxygen Species, thus protecting cells from injury. Seaweed extract successfully reduced H+-induced ion toxicities in rice by promoting their germination, physiological, metabolically, and growth parameters that could ultimately increase their productivity and yield in a sustainable and environmentally friendly manner.

Assessment of Physicochemical Properties and Heavy Metal Content of Floriculture Soil in Amhara Region of Northwest Ethiopia

Floriculture is a new and rapidly expanding sector in Ethiopia that aids economic growth but has also come under blame for pollution of the surrounding soil. The purpose of this study was to assess the soil physicochemical properties and heavy metal contents in floriculture in the Amhara Region of Northwest Ethiopia. Soil samples were collected from seven different greenhouses (2ABC, 4DEF, 5ABC, 7DEF, 8ABC, 9DEF, and 11DEF), and a control soil sample was taken on the 15-cm depth from a nearby agricultural area. They were analyzed for soil physicochemical parameters and heavy metal compositions. Soil texture showed a significant difference between the soils sampled from the greenhouses and the control group. The highest average clay, silt, and sand contents were recorded in the control group, 4DEF, and 9DEF, respectively. The lower clay content was at 9 DEF, silt at 11 DEF, and sand in the control group. Clay was positively correlated to soil pH (r = 0.66) and TN (r = 0.38) but showed significant negative correlation with the sand fraction (r = -0.96). The average bulk density (BD) values of the soils from the greenhouses were within acceptable ranges; however, the mean BD value of 7DEF was relatively highest (1.34 g/cm3). There were significant (P < 0.05) changes in soil pH and electrical conductivity, with pH values ranging from 5.8 to 7.17 and EC from 0.08 to 1.72 mScm-1. Soil organic carbon, available phosphorus, total nitrogen, and carbon-to-nitrogen ratio of the soil samples from the greenhouses and the control group were significantly different. There were also significant differences in soil exchangeable aluminum and acidity between greenhouse soil samples and the control group. Soil contents of some of the heavy metals (Pb, Cd, Mn, and Cu) in the floriculture soil were above the permissible limits, while Cr, Zn, and Ni contents were below. The soil in floriculture showed low quality compared to the control group and international standards, indicating the need for improved soil quality management. This study recommends reducing agrochemical use, increasing bio-fertilizers, using botanicals, and transitioning to organic farming. Further studies are needed to assess soil microbial diversity and abundance for soil fixation.

A comparative analysis of soil physicochemical properties and microbial community structure among four shelterbelt species in the northeast China plain

Conducting studies that focus on the alterations occurring in the soil microbiome within protection forests in the northeast plain is of utmost importance in evaluating the ecological rehabilitation of agricultural lands in the Mollisols region. Nevertheless, the presence of geographic factors contributes to substantial disparities in the microbiomes, and thus, addressing this aspect of influence becomes pivotal in ensuring the credibility of the collected data. Consequently, the objective is to compare the variations in soil physicochemical properties and microbial community structure within the understory of diverse shelterbelt species. In this study, we analyzed the understory soils of Juglans mandshurica (Jm), Fraxinus mandschurica (Fm), Acer mono (Am), and Betula platyphylla (Bp) from the same locality. We employed high-throughput sequencing technology and soil physicochemical data to investigate the impact of these different tree species on soil microbial communities, chemical properties, and enzyme activities in Mollisols areas. Significant variations in soil nutrients and enzyme activities were observed among tree species, with soil organic matter content ranging from 49.1 to 67.7 g/kg and cellulase content ranging from 5.3 to 524.0 μg/d/g. The impact of tree species on microbial diversities was found to be more pronounced in the bacterial community (Adnoism: R = 0.605) compared to the fungal community (Adnoism: R = 0.433). The linear discriminant analysis effect size (LEfSe) analysis revealed a total of 5 (Jm), 3 (Bp), and 6 (Am) bacterial biomarkers, as well as 2 (Jm), 6 (Fm), 4 (Bp), and 1 (Am) fungal biomarker at the genus level (LDA3). The presence of various tree species was observed to significantly alter the relative abundance of specific microbial community structures, specifically in Gammaproteobacteria, Ascomycota, and Basidiomycota. Furthermore, environmental factors, such as pH, total potassium, and available phosphorus were important factors influencing changes in bacterial communities. We propose that Fm be utilized as the primary tree species for establishing farmland protection forests in the northeastern region, owing to its superior impact on enhancing soil quality.

IMPORTANCE

The focal point of this study lies in the implementation of a controlled experiment conducted under field conditions. In this experiment, we deliberately selected four shelterbelts within the same field, characterized by identical planting density, and planting year. This deliberate selection effectively mitigated the potential impact of extraneous factors on the three microbiomes, thereby enhancing the reliability and validity of our findings.

Multivariate analysis and GIS approaches for modeling and mapping soil quality and land suitability in arid zones

Assessing soil quality marks the initial step in precision farming and agricultural management. Developing countries like Egypt face numerous hurdles in ensuring food security due to increasing populations and limited agricultural resources. A geographic information system (GIS) and multivariate analysis were utilized in the current work to evaluate and map a soil quality index (SQI). Moreover, the land suitability of the land for two plantations of the tree's oak (Quercus robur), and pine (Pinus silvestris), respectively was assessed using a parametric approach. A total of 82 soil profiles were selected to fulfill the objectives of the study. Based on the samples' PC scores, and agglomerative hierarchical clustering (AHC, the data was divided into two clusters: Cluster I and Cluster II, which collectively account for approximately 57% and 43% of the total data, respectively.. . The findings indicated that land suitability for planting Q. robur planted identified 2.14% of the research area as highly suitable (S1), 37.98% as moderately suitable (S2), and 59.89% as not suitable (N). Furthermore, the assessment of suitability for P. silvestris indicated that 50.88% of the investigated area was classified into: S1, 48.73% as S2, and 0.39% as N, which means it is not suitable for conservation activities. The research identified that soil depth beside excessive salinity and calcium carbonate as the primary soil constraints in the area in both clusters. The average soil depth, ECd and CaCO3 were 113.62 ± 12.41, 17.27 ± 10.23, 16.83 ± 6.57 in Cluster 1 and 45.43 ± 15.21, 22.42 ± 12.43, 21.55 ± 5.63 in Cluster II. The study demonstrates that integrating multivariate analysis with GIS enables a precise and streamlined assessment of the Soil Quality Index (SQI). Soil suitability modelling underscores the importance of implementing efficient management practices to attain agricultural sustainability in arid regions, particularly amidst intensive land utilization pressures.

Effects of Pieris japonica (Ericaceae) dominance on cool temperate forest altered-understory environments and soil microbiomes in Southern Japan

The number of plants unpalatable to deer increases with increasing deer numbers. In the Kyushu Mountain area of Southern Japan, Pieris japonica (Ericaceae), an unpalatable shrub, has become the monodominant vegetation under evergreen conifer and deciduous broad-leaved tree stands. The monodominance of unpalatable plants in the understory has potential advantages and drawbacks; however, the effects of Pieris dominance are not well understood. To assess the effects of P. japonica dominances on forest environments and ecosystems, we investigated understory environments and soil microbiomes in Pieris-dominant sites. Under the deciduous broad-leaved trees, Pieris dominance leads to considerable Pieris leaf litter and humus weights and low soil bulk density and canopy openness. In the soil fungal community and fungal functional groups, the relative abundance of symbiotrophic fungi, particularly ectomycorrhizal fungi in Pieris-dominant sites were lower than in other-vegetation understory sites and saprotrophic fungi vice versa. Because few seedlings and saplings were found under Pieris shrubs, Pieris dominance in the understory might exclude other plant species. The results of this study will contribute to the Pieris population and forest management following deer overgrazing.

Mineral solubilizing microorganisms and their combination with plants enhance slope stability by regulating soil aggregate structure

Introduction

The stability of exposed slopes is prone to natural disasters, seriously threatening socio-economic and human security. Through years of exploration and research, we proposed an active permanent greening (APG) method based on patented mineral solubilizing microorganisms (MSMs) as an improvement over the traditional greening method.

Methods

In this study, we selected two MSMs (Bacillus thuringiensis and Gongronella butleri) and a plant species (Lolium perenne L.) set up six treatments (T1, T2, T3, T4, T5, and T6) to investigate the effectiveness of the MSMs and their combinations with the plant species on the soil stability using APG method.

Results

We noted that both MSMs and the plant species significantly improved soil aggregate stability and organic matter content. Of all the treatments, the T1 treatment exhibited better results, with soil aggregate stability and organic matter content increased to 45.63% and 137.57%, respectively, compared to the control. Soil stability was significant positively correlated with macroaggregate content and negatively with microaggregates. Using structural equation modeling analysis, we further evaluated the mechanism underpinning the influence of organic matter content and fractions on the content of each graded agglomerates. The analysis showed that the macroaggregate content was influenced by the presence of the plant species, primarily realized by altering the content of organic matter and aromatic and amide compounds in the agglomerates, whereas the microaggregate content was influenced by the addition of MSMs, primarily realized by the content of organic matter and polysaccharide compounds. Overall, we observed that the effect of the co-action of MSMs and the plant species was significantly better than that of using MSMs or the plant species alone.

Discussion

The findings of this study provide reliable data and theoretical support for the development and practical application of the APG method to gradually develop and improve the new greening approach.

Agricultural input shocks affect crop yields more in the high-yielding areas of the world

The industrialization of agriculture has led to an increasing dependence on non-locally sourced agricultural inputs. Hence, shocks in the availability of agricultural inputs can be devastating to food crop production. There is also a pressure to decrease the use of synthetic fertilizers and pesticides in many areas. However, the combined impact of the agricultural input shocks on crop yields has not yet been systematically assessed globally. Here we modelled the effects of agricultural input shocks using a random forest machine learning algorithm. We show that shocks in fertilizers cause the most drastic yield losses. Under the scenario of 50% shock in all studied agricultural inputs, global maize production could decrease up to 26%, and global wheat production up to 21%, impacting particularly the high-yielding 'breadbasket' areas of the world. Our study provides insights into global food system resilience and can be useful for preparing for potential future shocks or agricultural input availability decreases at local and global scales.

Integrating metagenomics and metabolomics to study the response of microbiota in black soil degradation

As the largest commercial food production base and ecological security barrier, land degradation in black soil areas seriously threatens the global food supply and natural ecosystems. Therefore, determining the response of soil microbiota is crucial to restoring degraded soils. This study combined metagenomics and metabolomics to investigate the effect of different degrees of soil degradation on microbial community composition and metabolic function in black soils. It was found that alpha diversity in degraded soils (Shannon: 22.3) was higher than in nondegraded soil (ND) (Shannon: 21.8), and the degree of degradation significantly altered the structure and composition of soil microbial communities. The results of LEfSe analysis obtained 9 (ND), 7 (lightly degraded, LD), 10 (moderately degraded, MD), and 1 (severely degraded, SD) biomarkers in four samples. Bradyrhizobium, Sphingomonas, and Ramlibacter were significantly affected by soil degradation and can be considered biomarkers of ND, MD, and SD, respectively. Soil nutrient and enzyme activities decreased significantly with increasing black soil degradation, soil organic matter (SOM) content decreased from 11.12 % to 1.97 %, and Sucrase decreased from 23.53 to 6.59 mg/g/d. In addition, C was the critical driver affecting microbial community structure, contributing 61.2 % to differences in microbial community distribution, and microbial altering relative abundance which participle in the carbon cycle to respond to soil degradation. Metabolomic analyses indicated that soil degradation significantly modified the soil metabolite spectrum, and the metabolic functions of most microorganisms responding to soil degradation were adversely affected. The combined multi-omics analysis further indicated that biomarkers dominate in accumulating metabolites. These findings confirmed that due to their role in the composition and functioning of these degraded soils, these biomarkers could be employed in strategies for managing and restoring degraded black soils.

Land suitability assessment for wheat-barley cultivation in a semi-arid region of Eastern Anatolia in Turkey

The efficient use and sustainability of agricultural lands depend heavily on the characteristics of soil resources in a given area, as different soil properties can significantly impact crop growth and yield. Therefore, land suitability studies play a crucial role in determining the appropriate crops for a given area and ensuring sustainable agricultural practices. This study, conducted in Tusba District-Van, Turkey, represents a significant advancement in land suitability studies for wheat-barley cultivation. Using geographic information systems, the analytical hierarchical process method, and the standard scoring function, lands were determined based on the examined criteria for the suitability of wheat-barley cultivation. One of this study's main findings is identifying critical factors that influence the suitability of land for wheat-barley cultivation. These factors include slope, organic matter content, available water capacity, soil depth, cation exchange capacity, pH level, and clay content. It is important to note that slope is the most influential factor, followed by organic matter content and available water capacity. A Soil Quality Index map was produced, and the suitability of wheat-barley production in the studied area was demonstrated. More than 28% of the study area was very suitable for wheat-barley production (S2), and more than was 39% moderately suitable (S3). A positive regression (R2 = 0.67) was found between soil quality index values and crop yield. The relationship between soil quality index values and crop yield is above acceptable limits. Land suitability assessment can minimize labor and cost losses in the planning and implementation of sustainable ecological and economic agriculture. Furthermore, land suitability classes play an active role in the selection of the product pattern of the area by presenting a spatial decision support system.

Impact of Elevational Gradients and Chemical Parameters on Changes in Soil Bacterial Diversity Under Semiarid Mountain Region

Elevation gradients, often regarded as "natural experiments or laboratories", can be used to study changes in the distribution of microbial diversity related to changes in environmental conditions that typically occur over small geographical scales. We obtained bacterial sequences using MiSeq sequencing and clustered them into operational taxonomic units (OTUs). The total number of reads obtained by the bacterial 16S rRNA sequencing analysis was 1,090,555, with an average of approximately 45,439 reads per sample collected from various elevations. The current study observed inconsistent bacterial diversity patterns in samples from the lowest to highest elevations. 983 OTUs were found common among all the elevations. The most unique OTUs were found in the soil sample from elevation_2, followed by elevation_1. Soil sample collected at elevation_6 had the least unique OTUs. Actinobacteria, Protobacteria, Chloroflexi were found most abundant bacterial phyla in current study. Ammonium nitrogen (NH4+-N), and total phosphate (TP) are the main factors influencing bacterial diversity at elevations_1. pH was the main factor influencing the bacterial diversity at elevations_2, elevation_3 and elevation_4. Our results provide new visions on forming and maintaining soil microbial diversity along an elevational gradient and have implications for microbial responses to environmental change in semiarid mountain ecosystems.

Dynamics of rhizosphere bacterial communities and soil physiochemical properties in response to consecutive ratooning of sugarcane

Ratooning in sugarcane often leads to soil problems such as degradation, acidification, and soil-borne diseases that negatively impact agriculture output and sustainability. Understanding the alteration in bacterial communities, activities, and their diversity connected to the plant and soil under consecutive ratooning still needs to be clarified. To address this gap, multidisciplinary approaches such as Illumina sequencing and measurement of soil nutrients and enzymes were used in this study to analyze soil samples in a field with three consecutive ratooning sugarcane crops. The results revealed a decline in crop yield and significant changes (P < 0.05) in soil nutrients and bacterial diversity. Ratooning resulted in an acidic environment that potentially affected soil nutrients and enzyme activity responsible for the cycling of carbon, nitrogen, and phosphorous. Non-metric dimensional scaling (NMDS) confirmed the effect of ratooning on soil attributes. Moreover, a positive correlation between soil physiochemical properties and soil enzymes was observed. Alpha diversity indices indicated greater bacterial diversity in ratooning sugarcane. Bacterial diversity varied throughout the ratooning crop, and significant (P < 0.05) changes in the relative abundance of specific phyla were observed. For example, the relative abundance of Proteobacteria was decreased, and Acidobacteria was increased. Furthermore, the relative abundance of bacterial phyla was strongly correlated with soil attributes (enzymes and nutrients). Additionally, ratooning results in the depletion or enrichment of important agriculture microbial genera such as Sphingomonas, Burkholderia, and Acidothermus (P < 0.05), respectively. In conclusion, ratooning led to soil acidification, decreased fertility, and altered microbial structure and activity. Thus, restraining soil acidity by means of liming or biofertilizers to maintain soil nutrients, enzymatic activities, and microbial structure could benefit plants and soil to help create a long-term eco-friendly sugarcane cropping system.

Surface runoff and soil erosion from Nitisols and Ferralsols as influenced by different soil organic carbon levels under simulated rainfall conditions

Soil erosion poses a challenge to the environment and the sustainable use of natural resources, particularly in relation to agricultural production. The study aimed to assess the influence of different soil organic carbon (SOC) levels on runoff and soil erosion under varying levels of rainfall intensity. The study was conducted in pre-selected farmers' fields representing low, moderate and adequate SOC levels in Nitisols and Ferralsols. Two parallel experiments were set up in each type of soil using a split-plot layout arranged in Randomized Complete Block Design. The main plots were the different soil organic carbon levels while the sub-plots were the different simulated rainfall intensities. Rainfall simulation was then conducted to determine runoff and sediment losses on each soil type. The simulation was done using a land type sprinkler nozzle rainfall simulator (460 788 type) in an experimental plot of 1 m2, fenced with corrugated iron sheets with a small opening left for runoff collection. Runoff and sediment losses were determined from the volume collected in the jar. The data was subjected to analysis of variance and significant mean differences were determined using Tukey's Honest Test at a 95% confidence level. Pearson correlation was applied to assess the relationship between runoff volume and sediment loss. The results showed that Ferralsols recorded significantly higher runoff and sediment losses compared to Nitisols, by 60.27% and 53.14% respectively. However, adequate SOC level portrayed a significant effect in reducing erosion in both soil types, where it reduced runoff and sediment loss by 45.30% and 48.38% in Ferralsols and by 65.31% and 48.22% in Nitisols, respectively. In both soil types, runoff yield was positively correlated to rainfall intensity while sediment yield was inversely correlated with SOC levels. Therefore, the study recommends incorporation of organic matter to adequate levels in both soils, for reduced soil erosion.

Soil erosion control from trash residues at varying land slopes under simulated rainfall conditions

Trash mulches are remarkably effective in preventing soil erosion, reducing runoff-sediment transport-erosion, and increasing infiltration. The study was carried out to observe the sediment outflow from sugar cane leaf (trash) mulch treatments at selected land slopes under simulated rainfall conditions using a rainfall simulator of size 10 m × 1.2 m × 0.5 m with the locally available soil material collected from Pantnagar. In the present study, trash mulches with different quantities were selected to observe the effect of mulching on soil loss reduction. The number of mulches was taken as 6, 8 and 10 t/ha, three rainfall intensities viz. 11, 13 and 14.65 cm/h at 0, 2 and 4% land slopes were selected. The rainfall duration was fixed (10 minutes) for every mulch treatment. The total runoff volume varied with mulch rates for constant rainfall input and land slope. The average sediment concentration (SC) and sediment outflow rate (SOR) increased with the increasing land slope. However, SC and outflow decreased with the increasing mulch rate for a fixed land slope and rainfall intensity. The SOR for no mulch-treated land was higher than trash mulch-treated lands. Mathematical relationships were developed for relating SOR, SC, land slope, and rainfall intensity for a particular mulch treatment. It was observed that SOR and average SC values correlated with rainfall intensity and land slope for each mulch treatment. The developed models' correlation coefficients were more than 90%.

Meta-analysis of global soil data identifies robust indicators for short-term changes in soil organic carbon stock following land use change

The restoration of degraded lands and minimizing the degradation of productive lands are at the forefront of many environmental land management schemes around the world. A key indicator of soil productivity is soil organic carbon (SOC), which influences the provision of most soil ecosystem services. A major challenge in direct measurement of changes in SOC stock is that it is difficult to detect within a short timeframe relevant to land managers. In this study, we sought to identify suitable early indicators of changes in SOC stock and their drivers. A meta-analytical approach was used to synthesize global data on the impacts of arable land conversion to other uses on total SOC stock, 12 different SOC fractions and three soil structural properties. The conversion of arable lands to forests and grasslands accounted for 91 % of the available land use change datasets used for the meta-analysis and were mostly from Asia and Europe. Land use change from arable lands led to 50 % (32-68 %) mean increase in both labile (microbial biomass C and particulate organic C - POC) and passive (microaggregate, 53-250 μm diameter; and small macroaggregate, 250-2000 μm diameter) SOC fractions as well as soil structural stability. There was also 37 % (24-50 %) mean increase in total SOC stock in the experimental fields where the various SOC fractions were measured. Only the POC and the organic carbon stored in small macroaggregates had strong correlation with total SOC: our findings reveal these two SOC fractions were predominantly controlled by biomass input to the soil rather than climatic factors and are thus suitable candidate indicators of short-term changes in total SOC stock. Further field studies are recommended to validate the predictive power of the equations we developed in this study and the use of the SOC metrics under different land use change scenarios.

Composite film with adjustable number of layers for slow release of humic acid and soil remediation

In this study, to improve the soil amendment performance of film materials, composite films with the adjustable number of layers and controlled slow-release time were prepared using sodium alginate (SA), chitosan (CS) and activated charcoal (AC) as raw materials. The prepared multilayer films exhibited a wide pH response range and excellent slow-release time. The cumulative release of humic acid (HA) increased from 19.87 ± 0.98% to 66.72 ± 1.06% with increasing the pH from 4.0 to 10.0 after 700 h of slow-release. In addition, after 50 d of remediation in red soil, plantation soil, and saline soil, the NH₄⁺-N, Olsen-P, Olsen-K, and organic matter contents in the three soils were increased by 2.91-28.62 mg/kg, 46.97-70.43 mg/kg, 55.89-77.01 mg/kg, and 12.47-22.52 g/kg, respectively, and were able to provide sustained crop growth promotion effect. This study demonstrates the promising application of multilayer film in soil remediation and agricultural production.

Responses of Rhizosphere Bacterial and Fungal Communities to the Long-Term Continuous Monoculture of Water Oat

As an cultivated aquatic vegetable, the long-term continuous monocropping of water oat results in the frequent occurrence of diseases, the deterioration of ecological system and decreased quality of water oat. In this study, real-time quantitative PCR (qPCR) and Illumina high-throughput sequencing were used to determine the dynamic changes in bacterial and fungal communities in rhizosphere soil under continuous cropping of water oat for 1, 5, 10, 15 and 20 years (Y1, Y5, Y10, Y15 and Y20), and soil properties and enzyme activities were also determined. Results showed that the contents of soil organic carbon (SOC), total nitrogen (TN), alkali-hydrolyzable nitrogen (AN), available phosphorus (AP) and the activities of four soil enzymes increased in Y5 and Y10 and then decreased in Y15 and Y20. Spearman correlation analysis identified SOC, TN, AP and AN as the main factors that affect the four enzyme activities. The qPCR results showed that there was no significant difference in bacterial abundance between the different planting years, while the fungal abundance first increased and then decreased. The long-term continuous planting of water oat (Y15 and Y20) significantly reduced the operational taxonomic unit numbers and the Shannon, Chao1, and ACE indices of rhizosphere bacteria and fungi. The bacterial and fungal community compositions were markedly affected by the continuous planting year. The relative abundances of Bacteroidetes and Firmicutes decreased significantly in Y10 and Bacteroidetes increased significantly in Y15. Relative abundances of dominated Mortierellomycota and Ascomycota phyla increased with the continuous cropping years, while Rozellomycota presented the opposite trend. The AK, AN, and SOC were the main factors that changed the bacterial community, while AK and AP significantly shifted the fungal community. Thus, long-term continuous planting of water oat resulted in the deterioration of soil nutrients and microbial communities. The results provided a reference for the remediation of soil under continuous water oat planting and sustainable development of water oat industry.

Why is Brachiaria decumbens Stapf. a common species in the mining tailings of the Fundão dam in Minas Gerais, Brazil?

Currently, more than five years after the Fundão dam failure in Mariana, Minas Gerais, Brazil, Brachiaria decumbens Stapf. is the main grass in pasturelands affected by the mining tailings. The aim of this study was to investigate the reason for this fact as well as to determine the ecophysiological effects of mining tailings on B. decumbens and to test whether mixing the tailings with unaffected local soil enhances the affected soil properties. For the experiment, two different soils were collected, one unaffected soil without mining tailings (Ref) and the mining tailings (Tec), and we also created a mixture with 50 % of each soil type (Ref/Tec). We cultivated B. decumbens in the three soil treatments in a greenhouse for 110 days and evaluated soil physical-chemical properties and plant ecophysiology. Our results show that the tailings (Tec) compromised the normal ecophysiological state of B. decumbens. The species survived these adverse conditions due to its great efficiency in acquiring some elements. The soil management tested by this work mitigated the stress caused by tailings and can represent an alternative for the environmental recovery of the affected soils.

Soil carbon sequestration, greenhouse gas emissions, and water pollution under different tillage practices

Tillage is a common agricultural practice and a critical component of agricultural systems that is frequently employed worldwide in croplands to reduce climatic and soil restrictions while also sustaining various ecosystem services. Tillage can affect a variety of soil-mediated processes, e.g., soil carbon sequestration (SCS) or depletion, greenhouse gas (GHG) (CO2, CH4, and N2O) emission, and water pollution. Several tillage practices are in vogue globally, and they exhibit varied impacts on these processes. Hence, there is a dire need to synthesize, collate and comprehensively present these interlinked phenomena to facilitate future researches. This study deals with the co-benefits and trade-offs produced by several tillage practices on SCS and related soil properties, GHG emissions, and water quality. We hypothesized that improved tillage practices could enable agriculture to contribute to SCS and mitigate GHG emissions and leaching of nutrients and pesticides. Based on our current understanding, we conclude that sustainable soil moisture level and soil temperature management is crucial under different tillage practices to offset leaching loss of soil stored nutrients/pesticides, GHG emissions and ensuring SCS. For instance, higher carbon dioxide (CO2) and nitrous oxide (N2O) emissions from conventional tillage (CT) and no-tillage (NT) could be attributed to the fluctuations in soil moisture and temperature regimes. In addition, NT may enhance nitrate (NO3-) leaching over CT because of improved soil structure, infiltration capacity, and greater water flux, however, suggesting that the eutrophication potential of NT is high. Our study indicates that the evaluation of the eutrophication potential of different tillage practices is still overlooked. Our study suggests that improving tillage practices in terms of mitigation of N2O emission and preventing NO3- pollution may be sustainable if nitrification inhibitors are applied.

Climate change induces carbon loss of arable mineral soils in boreal conditions

One-fourth of the global soil organic carbon (SOC) is stored in the boreal region, where climate change is predicted to be faster than the global average. Planetary warming is accelerated if climate change promotes SOC release into the atmosphere as carbon dioxide. However, the soil carbon-climate feedbacks have been poorly confirmed by SOC measurements despite their importance on global climate. In this study, we used data collected as part of the Finnish arable soil monitoring program to study the influence of climate change, management practices, and historical land use on changes in SOC content using a Bayesian approach. Topsoil samples (n = 385) collected nationwide in 2009 and 2018 showed that SOC content has decreased at the rate of 0.35% year-1 on average. Based on the Bayesian modeling of our data, we can say with a certainty of 79%-91% that increase in summertime (May-Sep) temperature has resulted in SOC loss while increased precipitation has resulted in SOC loss with a certainty of 90%-97%. The exact percentages depend on the climate dataset used. Historical land use was found to influence the SOC content for decades after conversion to cropland. Former organic soils with a high SOC-to-fine-fraction ratio were prone to high SOC loss. In fields with long cultivation history (>100 years), however, the SOC-to-fine-fraction ratio had stabilized to approximately 0.03-0.04 and the changes in SOC content leveled off. Our results showed that, although arable SOC sequestration can be promoted by diversifying crop rotations and by cultivating perennial grasses, it is unlikely that improved management practices are sufficient to counterbalance the climate change-induced SOC losses in boreal conditions. This underlines the importance of the reduction of greenhouse gas emissions to avoid the acceleration of planetary warming.

Agricultural Management Practices and Decision-Making in View of Soil Organic Matter in the Urbanizing Region of Bangalore

Rapid urbanization and agricultural intensification are currently impacting the soils of many tropical countries. Bangalore is a growing megacity experiencing both issues and their derived ecological and socio-economic effects. This paper seeks to understand how the socio-economic effects of urbanization are affecting soil organic carbon (SOC) in Bangalore’s rural–urban interface. We first compiled information on how management practices affect SOC dynamics and specifically evaluated the effects of fertilization practices on SOC levels in major cropping systems. We then used interview data from farmers’ households across an urbanity gradient in Bangalore to test the association between urbanization as well as related socio-economic drivers and farming practices. We found that fertilization increases SOC concentrations, especially when mineral fertilizer is combined with additional farmyard manure. Single mineral fertilizer and a combination of mineral fertilizer and farmyard manure are commonly applied in Bangalore. Conservation practices, such as reduced tillage and mulching, are applied by 48% and 16% of households, respectively. Farm and household characteristics, including market integration, are the most important determinants of management decisions that affect SOC. Our study shows that improving farm and household conditions and opportunities, independently of the degree of urbanity, is necessary for implementing agricultural practices that can benefit SOC in Bangalore.

Degradation and Pathways of Carvone in Soil and Water

Carvone is a monoterpene compound that has been widely used as a pesticide for more than 10 years. However, little is known regarding the fate of carvone, or its degradation products, in the environment. We used GC-MS (gas chromatography–mass spectrometry) to study the fate of carvone and its degradation and photolysis products under different soil and light conditions. We identified and quantified three degradation products of carvone in soil and water samples: dihydrocarvone, dihydrocarveol, and carvone camphor. In soil, dihydrocarveol was produced at very low levels (≤0.067 mg/kg), while dihydrocarvone was produced at much higher levels (≤2.07 mg/kg). In water exposed to differing light conditions, carvone was degraded to carvone camphor. The photolysis rate of carvone camphor under a mercury lamp was faster, but its persistence was lower than under a xenon lamp. The results of this study provide fundamental data to better understand the fate and degradation of carvone and its metabolites in the environment.

Succession Pattern in Soil Micro-Ecology Under Tobacco (Nicotiana tabacum L.) Continuous Cropping Circumstances in Yunnan Province of Southwest China

Continuous cropping obstacle (CCO) is a common phenomenon in agricultural production and extremely threatens the sustainable development of agriculture. To clarify the potential keystone factors causing tobacco (Nicotiana tabacum L.) CCO, tobacco plants, topsoil, and rhizosphere soil were sampled from the fields with no, slight, and severe tobacco disease in Dali and Yuxi of Yunnan province in China. The physicochemical properties of topsoil and rhizosphere soil, the phenolic acids (PAs) contents in rhizosphere soil, and elemental contents in topsoil, rhizosphere soil, and tobacco plants were analyzed. Microbial diversity in rhizosphere soil was determined by the metagenomic sequencing method. The results showed that soil pH, texture, cation exchange capacity, organic matter, TC, TN, and available K contents showed a significant difference (p < 0.05) in soil physicochemical properties. There was a deficiency of B, K, Mg, and Mn contents in soil and/or tobacco plants. The contents of PAs, especially syringic acid in rhizosphere soil, varied significantly among the three sampling groups (p < 0.05). Meanwhile, microbial communities and functional genes changed from beneficial to harmful, showing an intimate correlation with soil pH and syringic acid content. It can be concluded that tobacco CCO could be allocated to the imbalance of soil micro-ecology, which possessed a regional feature at the two sampling sites.

Environmental opportunities and challenges of utilizing unactivated calcium peroxide to treat soils co-contaminated with mixed chlorinated organic compounds

Calcium peroxide (CaO₂) has been proven to oxidize various organic pollutants when they exist as a single class of compounds. However, there is a lack of research on the potential of unactivated CaO₂ to treat mixed chlorinated organic pollutants in soils. This study examined the potential of CaO₂ in treating soils co-contaminated with p-dichlorobenzene (p-DCB) and p-chloromethane cresol (PCMC). The effects of CaO₂ dosage and treatment duration on the rate of degradation were investigated. Furthermore, the collateral effects of the treatment on treated soil characteristics were studied. The result showed that unactivated CaO₂ could oxidize mixed chlorinated organic compounds in wet soils. More than 69% of the pollutants in the wet soil were mineralized following 21 days of treatment with 3% (w/w) CaO₂. The hydroxyl radicals played a significant role in the degradation process among the other decomposition products of hydrogen peroxide. Following the oxidation process, the treated soil pH was increased due to the formation of calcium hydroxide. Soil organic matter, cation exchange capacity, soil organic carbon, total nitrogen, and certain soil enzyme activities of the treated soil were decreased. However, the collateral effects of the system on electrical conductivity, available phosphorus, and particle size distribution of the treated soil were not significant. Likewise, since no significant release of heavy metals was seen in the treated soil matrix, the likelihood of metal ions as co-pollutants after treatment was low. Therefore, CaO₂ can be a better alternative for treating industrial sites co-contaminated with chlorinated organic compounds.

Identification of the key functional genes in salt-stress tolerance of Cyanobacterium Phormidium tenue using in silico analysis

The development of artificial biocrust using cyanobacterium Phormidium tenue has been suggested as an effective strategy to prevent soil degradation. Here, a combination of in silico approaches with growth rate, photosynthetic pigment, morphology, and transcript analysis was used to identify specific genes and their protein products in response to 500 mM NaCl in P. tenue. The results show that 500 mM NaCl induces the expression of genes encoding glycerol-3-phosphate dehydrogenase (glpD) as a Flavoprotein, ribosomal protein S12 methylthiotransferase (rimO), and a hypothetical protein (sll0939). The constructed co-expression network revealed a group of abiotic stress-responsive genes. Using the Basic Local Alignment Search Tool (BLAST), the homologous proteins of rimO, glpD, and sll0939 were identified in the P. tenue genome. Encoded proteins of glpD, rimO, and DUF1622 genes, respectively, contain (DAO and DAO C), (UPF0004, Radical SAM and TRAM 2), and (DUF1622) domains. The predicted ligand included 22B and MG for DUF1622, FS5 for rimO, and FAD for glpD protein. There was no direct disruption in ligand-binding sites of these proteins by Na+, Cl-, or NaCl. The growth rate, photosynthetic pigment, and morphology of P. tenue were investigated, and the result showed an acceptable tolerance rate of this microorganism under salt stress. The quantitative real-time polymerase chain reaction (qRT-PCR) results revealed the up-regulation of glpD, rimO, and DUF1622 genes under salt stress. This is the first report on computational and experimental analyses of the glpD, rimO, and DUF1622 genes in P. tenue under salt stress to the best of our knowledge.

SUPPLEMENTARY INFORMATION

The online version contains supplementary material available at 10.1007/s13205-021-03050-w.

Identification and predictability of soil quality indicators from conventional soil and vegetation classifications

The physical, chemical and biological attributes of a soil combined with abiotic factors (e.g. climate and topography) drive pedogenesis and some of these attributes have been used as proxies to soil quality. Thus, we investigated: (1) whether appropriate soil quality indicators (SQIs) could be identified in soils of Great Britain, (2) whether conventional soil classification or aggregate vegetation classes (AVCs) could predict SQIs and (3) to what extent do soil types and/ or AVCs act as major regulators of SQIs. Factor analysis was used to group 20 soil attributes into six SQI which were named as; soil organic matter (SOM), dissolved organic matter (DOM), soluble N, reduced N, microbial biomass, DOM humification (DOMH). SOM was identified as the most important SQI in the discrimination of both soil types and AVCs. Soil attributes constituting highly to the SOM factor were, microbial quotient and bulk density. The SOM indicator discriminated three soil type groupings and four aggregate vegetation class groupings. Among the soil types, only the peat soils were discriminated from other groups while among the AVCs only the heath and bog classes were isolated from others. However, the peat soil and heath and bog AVC were the only groups that were distinctly discriminated from other groups. All other groups heavily overlapped with one another, making it practically impossible to define reference values for each soil type or AVC. The two-way ANOVA showed that the AVCs were a better regulator of the SQIs than the soil types. We conclude that conventionally classified soil types cannot predict the SQIs defined from large areas with differing climatic and edaphic factors. Localised areas with similar climatic and topoedaphic factors may hold promise for the definition of SQI that may predict the soil types or AVCs.

Responses of soil bacterial and fungal communities to the long-term monoculture of grapevine

Soil microorganisms are essential for the long-term sustainability of agricultural ecosystems. However, continuous grapevine replanting can disrupt the stability of soil microbial communities. We investigated the bacterial and fungal abundance, diversity, and community composition in rhizosphere soils with continuous grapevine replanting for 5, 6, 7 (Y5, Y6, and Y7; short-term), and 20 (Y20; long-term) years with high-throughput sequencing. Results showed that diversities and abundances of bacterial and fungal communities in Y20 were significantly lower than in other samples. The bacterial and fungal community compositions were markedly affected by the replanting time and planting year. After short-term grapevine replanting, relative abundances of potential beneficial bacteria and harmful fungi in rhizosphere soils were higher compared to long-term planting. Bacterial and fungal communities were significantly correlated with available nitrogen (AN), available phosphorus, available potassium (AK), and pH. AK and AN were the primary soil factors related to the shift of bacterial and fungal communities. Bacterial and fungal co-occurrence patterns were remarkably affected by replanting time, showing that fallow land harbored co-occurrence networks more complex than those in other groups, with the Y20 group showing the lowest complexity. Then, we isolated the dominant fungi in grapevine rhizosphere soil after continuous replanting and verified the harmful effects of three candidate strains through pot experiments. The results showed that 12 days post-treating the soil with fungal spore suspensions significantly inhibited grapevine seedlings' growth, whereas Fusarium solani inhibited plant growth. Overall, we showed that F. solani might be a potentially harmful fungus related to grapevine replant diseases. KEY POINTS: • Continuous grapevine planting reduced soil microbe diversities/abundances. • Beneficial bacteria and harmful fungi increased after short-term replanting. • F. solani may be a harmful fungus related to grapevine replant diseases.

Sugarcane monoculture drives microbial community composition, activity and abundance of agricultural-related microorganisms

Sugarcane monoculture (SM) often leads to soil problems, like soil acidification, degradation, and soil-borne diseases, which ultimately pose a negative impact on agricultural productivity and sustainability. Understanding the change in microbial communities' composition, activities, and functional microbial taxa associated with the plant and soil under SM is unclear. Using multidisciplinary approaches such as Illumina sequencing, measurements of soil properties, and enzyme activities, we analyzed soil samples from three sugarcane fields with different monoculture histories (1-, 2-, and 4-year cultivation times, respectively). We observed that SM induced soil acidity and had adverse effects on soil fertility, i.e., soil organic matter (OM), total nitrogen (TN), total carbon (TC), and available potassium (AK), as well as enzyme activities indicative for carbon, phosphorus, and nitrogen cycles. Non-metric multidimensional scaling (NMDS) analysis showed that SM time greatly affected soil attribute patterns. We observed strong correlation among soil enzymes activities and soil physiochemical properties (soil pH, OM, and TC). Alpha diversity analysis showed a varying response of the microbes to SM time. Bacterial diversity increased with increasing oligotrophs (e.g., Acidobacteria and Chloroflexi), while fungal diversity decreased with reducing copiotrophs (e.g., Ascomycota). β-Diversity analysis showed that SM time had a great influence on soil microbial structure and soil properties, which led to the changes in major components of microbial structure (soil pH, OM, TC, bacteria and soil pH; TC, fungi). Additionally, SM time significantly stimulated (four bacterial and ten fungal) and depleted (12 bacterial and three fungal) agriculturally and ecologically important microbial genera that were strongly and considerably correlated with soil characteristics (soil pH, OM, TC, and AK). In conclusion, SM induces soil acidity, reduces soil fertility, shifts microbial structure, and reduces its activity. Furthermore, most beneficial bacterial genera decreased significantly due to SM, while beneficial fungal genera showed a reverse trend. Therefore, mitigating soil acidity, improving soil fertility, and soil enzymatic activities, including improved microbial structure with beneficial service to plants and soil, can be an effective measure to develop a sustainable sugarcane cropping system.

The influence of vermicomposting on photosynthetic activity and productivity of maize (Zea mays L.) crop under semi-arid climate

Food production and waste recycling are the two major issues faced globally with rapidly increasing population. Recycling organic wastes to crop amendments could be a possible solution to these issues. Earthworms transfer organic waste to compost, which is used to grow crops and increase crop productivity. This study assessed the impact of vermicompost produced from the residues of six desert plant species, i.e., (Ziziphus mauritiana, Aerva javanica, Calligonum comosum, Sacchrum benghalens, Calligonum polygonoides and Prosopis cineraria) combined with farmyard manure (5 t ha-1) on growth, yield and photosynthetic activity of maize crop. Earthworm species Eisenia fetida (Savigny, 1826) was used to prepare vermicomposting of all tested plant species. The desert species were collected from natural habitats, chopped, dried, mixed with FYM and then earthworms were released to prepare the vermicompost. The earthworms were excluded twenty days after release and resultant was considered as compost and used in the experiment. Results revealed that application of P. cineraria vermicompost resulted in the highest plant height (75.33 cm), stem diameter (22.66 mm), cob length (17.66 cm), number of grains/cob (374.67), 1000-grain weight (260.41 g) and grains yield (3.20 t/ha). Application of P. cineraria vermicompost resulted in the highest uptake of macronutrients, i.e., N (91.01%), P (22.07%), K (80.41%), micronutrients, i.e., Fe (19.07 ppm), Zn (40.05 ppm), and phenolic contents (150). Application of P. cineraria vermicompost also resulted in the highest quantum photosynthetic yield (0.42 mole C/mole of photon), chlorophyll florescence (355.18 moles of photon m-2s-1) and electron transport rate (310.18 micro mole m-2s-1). It is concluded that vermicomposting has the potential to improve growth and yield of maize crop. Particularly, application of vermicompost obtained from P. cineraria can be used to improve the growth and yield of maize crop. Nonetheless, field trials are necessary for a wide scale recommendation.

Physicochemical properties as related to mineralogical composition of floodplain soils in humid tropical environment and the pedological significance

Floodplains represent a huge but poorly understood and hence underutilised agricultural resource in the tropics. Insight into the pedogenesis of the soils could guide their exploitation. This study assessed the physicochemical and mineralogical properties of floodplain soils and explored the interrelationships among these properties for informed inferences on contemporary pedogenic processes. Surface (0-20 cm) and subsurface (69-200 cm) horizons of four pedons of River Benue floodplains (central Nigeria) on shale/alluvium were sampled and analysed. The physicochemical and mineralogical properties were examined for relationships whose pedological significance was discussed. Silt and clay contents were in the ranges of 117-614 and 50-500 g kg^-1, respectively, being generally higher in the surface and sub-surface horizons, respectively. The soils are young with one surface horizon being silt loam. The surface horizons had higher soil pH (5.9) but lower soil organic carbon (12.63 g kg^-1), total nitrogen (1.05 g kg^-1), effective cation exchange capacity (18.58 cmol kg^-1), and available phosphorus (5.50 mg kg^-1) than the sub-surface horizons. The minerals followed the order quartz < illite < kaolinite. Quartz related inversely to the clay minerals (kaolinite and illite), but none of these minerals influenced the physicochemical properties. Instead, soil textural/acidity indices influenced those defining colloidal activity and fertility status, implying greater dependence on their mixed parent material than overall pedogenesis. It is inferred from the mineralogical relations that illitization prevails in these fast-weathering soils. The lesser influence of pedogenesis on their inherent fertility calls for effective management using the multifunctional sawah ecotechnology. The illitization may not cause environmental problems due to clay activity. Alluvial deposit-mediated increases in silt could promote carbon sequestration; however, off-site detrimental effects of nutrients associated with this erosion-susceptible silt would be expected.

Unraveling the Influence of Land-Use Change on δ13C, δ15N, and Soil Nutritional Status in Coniferous, Broadleaved, and Mixed Forests in Southern China: A Field Investigation

Natural isotopic abundance in soil and foliar can provide integrated information related to the long-term alterations of carbon (C) and nitrogen (N) cycles in forest ecosystems. We evaluated total carbon (TC), total nitrogen (TN), and isotopic natural abundance of C (δ¹³C) and N (δ¹⁵N) in soil and foliar of coniferous plantation (CPF), natural broadleaved forest (NBF), and mixed forest stands at three different soil depths (i.e., 0–10, 10–20, and 20–40 cm). This study also explored how soil available nutrients are affected by different forest types. Lutou forest research station, located in Hunan Province, central China, was used as the study area. Results demonstrated that the topsoil layer had higher TC and TN content in the mixed forest stand, resulting in a better quality of organic materials in the topsoil layer in the mixed forest than NBF and CPF. In general, soil TC, TN, and δ¹⁵N varied significantly in different soil depths and forest types. However, the forest type did not exhibit any significant effect on δ¹³C. Overall, soil δ¹³C was significantly enriched in CPF, and δ¹⁵N values were enriched in mixed forest. Foliar C content varied significantly among forest types, whereas foliar N content was not significantly different. No big differences were observed for foliar δ¹⁵N and δ¹³C across forest types. However, foliar δ¹³C and δ¹⁵N were positively related to soil δ¹³C and δ¹⁵N, respectively. Foliar N, soil and foliar C:N ratio, soil moisture content (SMC), and forest type were observed as the major influential factors affecting isotopic natural abundance, whereas soil pH was not significantly correlated. In addition, forest type change and soil depth increment had a significant effect on soil nutrient availability. In general, soil nutrient availability was higher in mixed forest. Our findings implied that forest type and soil depth alter TC, TN, and soil δ¹⁵N, whereas δ¹³C was only driven by soil depth. Moreover, plantations led to a decline in soil available nutrient content compared with NBF and mixed forest stands.

Cultivated Land Use Zoning Based on Soil Function Evaluation from the Perspective of Black Soil Protection

Given that cultivated land serves as a strategic resource to ensure national food security, blind emphasis on improvement of food production capacity can lead to soil overutilization and impair other soil functions. Therefore, we took Heilongjiang province as an example to conduct a multi-functional evaluation of soil at the provincial scale. A combination of soil, climate, topography, land use, and remote sensing data were used to evaluate the functions of primary productivity, provision and cycling of nutrients, provision of functional and intrinsic biodiversity, water purification and regulation, and carbon sequestration and regulation of cultivated land in 2018. We designed a soil function discriminant matrix, constructed the supply-demand ratio, and evaluated the current status of supply and demand of soil functions. Soil functions demonstrated a distribution pattern of high grade in the northeast and low grade in the southwest, mostly in second-level areas. The actual supply of primary productivity functions in 71.32% of the region cannot meet the current needs of the population. The dominant function of soil in 34.89% of the area is water purification and regulation, and most of the cultivated land belongs to the functional balance region. The results presented herein provide a theoretical basis for optimization of land patterns and improvement of cultivated land use management on a large scale, and is of great significance to the sustainable use of black soil resources and improvement of comprehensive benefits.

Waste-Derived NPK Nanofertilizer Enhances Growth and Productivity of Capsicum annuum L

Waste generation is a global issue that necessitates effective management for both human and animal health as well as environment. There are several ways to reduce waste, but recycling appears to be the best choice. By recycling, not only will the problem of pollution be resolved, but valuable compounds could be generated to be used as nutrients for plants. In this study, eco-friendly methods were established to produce α- and β-chitosan (CS) (as a source of nitrogen) with different degrees of deacetylation from shrimp shells and squid pin waste, phosphorous through degreasing and calcination of bovine bone and potassium from evaporation of banana peels Kolakhar. The waste bulk products were physically characterized and dry-milled into nano-powders. Different concentrations of the produced nano-NPK fertilizer (10%, 25%, 50% and 100%) were foliar-applied to Capsicum annum L. cv. Cordoba plants and compared to commercial chemical fertilizer and untreated control plants. The obtained results revealed that the nano-composite NPK with 25% concentration significantly promoted growth, yield and harvest of C. annuum as compared with the control and chemical fertilizer-treated plants. This study demonstrated that the use of an eco-friendly preparation of waste NPK composites, with a low concentration, could be applied as foliar fertilizer over chemical fertilizer to enhance the growth and productivity of Capsicum.

Critical range of soil organic carbon in southern Europe lands under desertification risk

Soil quality is fundamental for ecosystem long term functionality, productivity and resilience to current climatic changes. Despite its importance, soil is lost and degraded at dramatic rates worldwide. In Europe, the Mediterranean areas are a hotspot for soil erosion and land degradation due to a combination of climatic conditions, soils, geomorphology and anthropic pressure. Soil organic carbon (SOC) is considered a key indicator of soil quality as it relates to other fundamental soil functions supporting crucial ecosystem services. In the present study, the functional relationships among SOC and other important soil properties were investigated in the topsoil of 38 sites under different land cover and management, distributed over three Mediterranean regions under strong desertification risk, with the final aim to define critical SOC ranges for fast loss of important soil functionalities. The study sites belonged to private and public landowners seeking to adopt sustainable land management practices to support ecosystem sustainability and productivity of their land. Data showed a very clear relationship between SOC concentrations and the other analyzed soil properties: total nitrogen, bulk density, cation exchange capacity, available water capacity, microbial biomass, C fractions associated to particulate organic matter and to the mineral soil component and indirectly with net N mineralization. Below 20 g SOC kg^-1, additional changes of SOC concentrations resulted in a steep variation of all the analyzed soil indicators, an order of magnitude higher than the changes occurring between 50 and 100 g SOC kg^-1 and 3-4 times the changes observed at 20-50 g SOC kg^-1. About half of the study sites showed average SOC concentration of the topsoil centimetres <20 g SOC kg^-1. For these areas the level of SOC might hence be considered critical and immediate and effective recovery management plans are needed to avoid complete land degradation in the next future.

Remediation of trichloroethylene contaminated soil by unactivated peroxymonosulfate: Implication on selected soil characteristics

The advanced oxidation process (AOP) based on activated Peroxymonosulfate (PMS) has been attracting many people in the field of soil and water remediation in many ways while ignoring the shortcomings. The high cost of activators, and energy input, as well as the expense to separate the catalyst and transition metal reducing agent from the treated soil, were some disadvantages of using activated PMS. Based on the above rationales of problems related to the use of activated PMS, this study aimed to study the performance of using unactivated peroxymonosulfate for the advanced oxidation process to remediate soil contaminated by trichloroethylene (TCE), and to evaluate the synergistic effect on selected soil properties after treatment. The results showed that within 45 min, a single injection of 5 mM PMS at its initial pH value can degrade 86.90% of the total TCE in the soil. However, when PMS was continuously injected, the removal rate was increased to 95.25%. The direct reaction of TCE and PMS was the main cause of degradation. PMS can degrade TCE in a wide pH range (pH 3-11), but the maximum degradation was at pH = 2.9 (the initial pH of PMS). After the treatment, the soil organic matter (SOM) was degraded significantly. In contrast, FTIR, SEM, and hydrometer tests conducted on the soil showed that the treatment had no significant effect on the functional groups and particle size distribution of the treated soil. The study on the effect of the treatment on the concentration of bioavailable heavy metals in the treated soil showed that only manganese and copper metals were significantly increased after the treatment. According to the results obtained in this study, it is more beneficial and feasible to use unactivated peroxymonosulfate in the advanced oxidation process when remediating soil contaminated by chlorinated organic matter.

Development of a Spatial Model for Soil Quality Assessment under Arid and Semi-Arid Conditions

Food security has become a global concern for humanity with rapid population growth, requiring a sustainable assessment of natural resources. Soil is one of the most important sources that can help to bridge the food demand gap to achieve food security if well assessed and managed. The aim of this study was to determine the soil quality index (SQI) for El Fayoum depression in the Western Egyptian Desert using spatial modeling for soil physical, chemical, and biological properties based on the MEDALUS methodology. For this purpose, a spatial model was developed to evaluate the soil quality of the El Fayoum depression in the Western Egyptian Desert. The integration between Digital Elevation Model (DEM) and Sentinel-2 satellite image was used to produce landforms and digital soil mapping for the study area. Results showed that the study area located under six classes of soil quality, e.g., very high-quality class represents an area of 387.12 km2 (22.7%), high-quality class occupies 441.72 km2 (25.87%), the moderate-quality class represents 208.57 km2 (12.21%), slightly moderate-quality class represents 231.10 km2 (13.5%), as well as, a low-quality class covering an area of 233 km2 (13.60%), and very low-quality class occupies about 206 km2 (12%). The Agricultural Land Evaluation System for arid and semi-arid regions (ALESarid) was used to estimate land capability. Land capability classes were non-agriculture class (C6), poor (C4), fair (C3), and good (C2) with an area 231.87 km2 (13.50%), 291.94 km2 (17%), 767.39 km2 (44.94%), and 416.07 km2 (24.4%), respectively. Land capability along with the normalized difference vegetation index (NDVI) used for validation of the proposed model of soil quality. The spatially-explicit soil quality index (SQI) shows a strong significant positive correlation with the land capability and a positive correlation with NDVI at R2 0.86 (p < 0.001) and 0.18 (p < 0.05), respectively. In arid regions, the strategy outlined here can easily be re-applied in similar environments, allowing decision-makers and regional governments to use the quantitative results achieved to ensure sustainable development.

Enzymatic Activity and Its Relationship with Organic Matter Characterization and Ecotoxicity to Aliivibrio fischeri of Soil Samples Exposed to Tetrabutylphosphonium Bromide

This study aimed to determine the impact of tetrabutylphosphonium bromide [TBP][Br] on the soil environment through an experiment on loamy sand samples. The tested salt was added to soil samples at doses of 0 (control), 1, 10, 100, and 1000 mg kg-1 dry matter (DM). During the experiment, the activity of selected enzymes involved in carbon, phosphorus, and nitrogen cycles, characteristics of organic matter with Fourier-transform infrared (FT-IR) spectroscopy, and toxicity of soil samples in relation to Aliivibrio fischeri were determined at weekly intervals. The results showed that low doses of [TBP][Br] (1 and 10 mg kg-1 DM) did not have much influence on the analyzed parameters. However, the addition of higher doses of the salt into the soil samples (100 and 1000 mg kg-1 DM) resulted in a decrease in the activity of enzymes participating in the carbon and phosphorus cycle and affected the activation of those enzymes involved in the nitrogen cycle. This may be due to changes in aerobic conditions and in the qualitative and quantitative composition of soil microorganisms. It was also observed that the hydrophobicity of soil organic matter was increased. Moreover, the findings suggested that the soil samples containing the highest dose of [TBP][Br] (1000 mg kg-1 DM) can be characterized as acute environmental hazard based on their toxicity to Aliivibrio fischeri bacteria. The increased hydrophobicity and ecotoxicity of the soil samples exposed to the tested salt were also positively correlated with the activity of dehydrogenases, proteases, and nitrate reductase. Observed changes may indicate a disturbance of the soil ecochemical state caused by the presence of [TBP][Br].

Farmer’s Perception, Agricultural Subsidies, and Adoption of Sustainable Agricultural Practices: A Case from Mongolia

The farmers’ sustainable production behavior is viewed as the frontline measure that accomplishes sustainable development in agriculture. Finding ways to support farmers’ adoption of sustainable agriculture practices (SAP) has become an issue of concern for researchers and policymakers. The paper aimed to investigate the impact of the current subsidy policy and other key variables on the adoption behavior of the Mongolian wheat growers. The generalized structural equation modeling was employed along with the protection motivation theory framework. The results show that the farmers who perceive high severity and vulnerability of soil erosion are more likely to adopt the SAPs. Moreover, the perceived efficacy of the practices and the farmers’ perceived self competency contribute to the decision. The information and training are positively associated with adoption. We also reveal differences between the regions on adoption. Soil fertility has a significant negative impact. Finally, government subsidies are found to have no effect as these subsidies are not intended to promote sustainability. The study findings suggest that increasing farmers’ awareness of the harmful effects of growth-oriented production practices, giving related information, and providing training and resources for the use of SAPs that are appropriate to the specific region. The results have implications for developing a policy targeted to promote the adoption of SAPs.

Indicators for assessment of soil quality: a mini-review

Soil quality is the competence of soil to perform necessary functions that are able to maintain animal and plant productivity of the soil. Soil consists of various physical, chemical, and biological parameters, and all these parameters are involved in the critical functioning of soil. There is a need for continuous assessment of soil quality as soil is a complex and dynamic constituent of Earth's biosphere that is continuously changing by natural and anthropogenic disturbances. Any perturbations in the soil cause disturbances in the physical (soil texture, bulk density, etc.), chemical (pH, salinity, organic carbon, etc.), and biological (microbes and enzymes) parameters. These physical, chemical, and biological parameters can serve as indicators for soil quality assessment. However, soil quality assessment cannot be possible by evaluating only one parameter out of physical, chemical, or biological. So, there is an emergent need to establish a minimum dataset (MDS) which shall include physical, chemical, and biological parameters to assess the quality of the given soil. This review attempts to describe various physical, chemical, and biological parameters, combinations of which can be used in the establishment of MDS.

The Conversion of Abandoned Chestnut Forests to Managed Ones Does Not Affect the Soil Chemical Properties and Improves the Soil Microbial Biomass Activity

Recently, several hectares of abandoned chestnut forests (ACF) were recovered into chestnut stands for nut or timber production; however, the effects of such practice on soil mineral horizon properties are unknown. This work aimed to (1) identify the better chestnut forest management to maintain or to improve the soil properties during the ACF recovery, and (2) give an insight into the effect of unmanaged to managed forest conversion on soil properties, taking in consideration sweet chestnut (Castanea sativa Mill.) forest ecosystems. The investigation was conducted in an experimental chestnut (Castanea sativa Mill.) forest located in the northern part of the Apennine chain (Italy). We identified an ACF, a chestnut forest for wood production (WCF), and chestnut forests for nut production with a tree density of 98 and 120 plants ha−1 (NCFL and NCFH, respectively). WCF, NCFL and NCFH stands are the result of the ACF recovery carried out in 2004. After 15 years since the ACF recovery, generally, the effects on the main soil chemical properties were negligible. Some differences occurred for the water-soluble organic carbon (WSOC) and microbial biomass and its activity. NCFL showed the highest WSOC content in the uppermost soil horizon likely due to higher amount of roots which are source of labile organic compounds. The higher WSOC amount might explain the greatest amount of microbial biomass in the A horizon of NCFL. Furthermore, the microbial biomass harboring in the A horizon of NCFL has also shown both a better C use efficiency and a larger soil organic carbon immobilization in the microbial biomass itself. Our data would indicate that the ACF recovery into pure chestnut forests did not have negative impacts on soil chemical and biochemical properties, though chestnut stands for nut production with a low plant density are the most suitable ones.

Relative distribution of rare-earth metals alongside alkaline earth and alkali metals in rhizosphere of agricultural soils in humid tropical environment

The study of trace and major elements in the biosphere has traditionally focused on the transition and basic metals; the rare earth (REMs), alkaline earth (AEMs) and alkali metals (AMs) that equally constitute environmental contaminants are rarely considered especially in the tropics. The levels and spatial variation of some REMs, AEMs and AMs in the 0-50-cm layer of agricultural soils of Ikwo in southeastern Nigeria typing a humid tropical environment were studied. Soil sampling was undertaken at five zones namely north, south, east, west and centre (covering over 60% of the land area) in the 2017 dry season. Four soil samples were collected from each of the four cardinal points (with evidence of mining and agricultural activities), and two from the centre (serving as reference zone), totalling 18. Metal concentrations were determined using inductively coupled plasma atomic emission spectroscopy. The metals were grouped into REMs (Ce, La, Sm), AEMs (Ba, Ca, Mg, Sr) and AMs (Cs, K, Na, Rb). All metals increased in concentration from the north, or the south (for Ce and Sm only), towards the centre. Overall, they were reasonably similar in distribution pattern among the five zones. Cationic ratios did not vary markedly, reflecting the greater role of pedogenesis than anthropogenic activities in the area. Nevertheless, their variations showed more K, Ca, Sr and La enrichments over the other metals. Enrichment factor and pollution index of the REMs showed healthy levels of these elements in the soils. The data from this preliminary study may add to the data pool on levels and occurrence of REMs, AEMs and AMs in largely disturbed ecosystems of the humid tropics.