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Benkeblia N. Gas chromatography-mass spectrometry and liquid chromatography-mass spectrometry metabolomics platforms: Tools for plant oligosaccharides analysis. CARBOHYDRATE POLYMER TECHNOLOGIES AND APPLICATIONS 2023. [DOI: 10.1016/j.carpta.2023.100304] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/02/2023] Open
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2
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Hessami MJ, Cheng SF, Ambati RR, Yin YH, Phang SM. Bioethanol production from agarophyte red seaweed, Gelidium elegans, using a novel sample preparation method for analysing bioethanol content by gas chromatography. 3 Biotech 2019; 9:25. [PMID: 30622863 DOI: 10.1007/s13205-018-1549-8] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/09/2018] [Accepted: 12/20/2018] [Indexed: 01/09/2023] Open
Abstract
In this study, Gelidium elegans is investigated for ethanol production. A combination of factors including different temperatures, acid concentration and incubation time was evaluated to determine the suitable saccharification conditions. The combination of 2.5% (w/v) H2SO4 at 120 °C for 40 min was selected for hydrolysis of the seaweed biomass, followed by purification, and fermentation to yield ethanol. The galactose and glucose were dominant reducing sugars in the G. elegans hydrolysate and under optimum condition of dilute acid hydrolysis, 39.42% of reducing sugars was produced and fermentation resulted in ethanol concentration of 13.27 ± 0.47 g/L. A modified method was evaluated for sample preparation for gas chromatography (GC) analysis of the ethanol content. A solvent mixture of acetonitrile and iso-butanol precipitated dissolved organic residues and reduced water content in GC samples at least by 90%. Results showed that this method could be successfully used for bioethanol production from seaweed.
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3
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Reed RH, Davison IR. Gas-liquid chromatography of low molecular weight carbohydrates from marine macroalgae: a rapid direct extraction procedure using dimethyl sulphoxide. ACTA ACUST UNITED AC 2007. [DOI: 10.1080/00071618400650421] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
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Clamp JR, Bhatti T, Chambers RE. The determination of carbohydrate in biological materials by gas-liquid chromatography. METHODS OF BIOCHEMICAL ANALYSIS 2006; 19:229-344. [PMID: 4935452 DOI: 10.1002/9780470110386.ch3] [Citation(s) in RCA: 124] [Impact Index Per Article: 6.9] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/13/2023]
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6
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Formation of pentosidine during nonenzymatic browning of proteins by glucose. Identification of glucose and other carbohydrates as possible precursors of pentosidine in vivo. J Biol Chem 1991. [DOI: 10.1016/s0021-9258(18)99007-1] [Citation(s) in RCA: 371] [Impact Index Per Article: 11.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022] Open
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7
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Deshpande V. Buffalo thyroglobulin. COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY. B, COMPARATIVE BIOCHEMISTRY 1991; 100:217-21. [PMID: 1799963 DOI: 10.1016/0305-0491(91)90364-j] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
Abstract
1. Buffalo thyroglobulin is the major iodoprotein of buffalo thyroid with a sedimentation coefficient of 19 S and an apparent molecular mass of 685 kDa. 2. The protein is rich in iodine (1-2%) and thyroxine bound iodine (75%), unlike thyroglobulins of other mammalian species. 3. As a glycoprotein, it has the same sugar residues as noted for other thyroglobulins, and the total carbohydrate content varies from 8.41 to 9.61%. 4. Amino acid composition of buffalo thyroglobulin is similar to other species. However, the protein has 2% more proline than other mammalian thyroglobulins. 5. Glutamic acid is the sole N-terminal amino acid of buffalo thyroglobulin, in contrast to aspartic acid or asparagine for several other species. 6. The quaternary structure of the protein appears to be comprised of eight non-identical subunits.
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Affiliation(s)
- V Deshpande
- Department of Biochemistry, University College of Science, Osmania University, Andhra Pradesh, India
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8
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Kraus RJ, Shinnick FL, Marlett JA. Simultaneous determination of neutral and amino sugars in biological materials. J Chromatogr A 1990; 513:71-81. [PMID: 2229246 DOI: 10.1016/s0021-9673(01)89426-7] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
Abstract
A method is described for the simultaneous analysis of nine neutral and three amino sugars. Mixtures of standard sugars and biological samples were acid hydrolyzed with a two step Saeman procedure, neutralized with BaCO3, reduced with sodium borohydride, acidified, evaporated and alditol acetates prepared. Baseline resolution was achieved on a glass-capillary SP-2340 column in ca. 52 min. Reproducibility, response factors and hydrolysis losses were determined. Quantitation was linear over the range of 10-20 micrograms/ml to 2000 micrograms/ml. Conditions were defined for the reproducible quantitation of muramic acid.
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Affiliation(s)
- R J Kraus
- Department of Nutritional Sciences, University of Wisconsin-Madison 53706
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9
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Silva E, Edwards AM, Faljoni-Alario A. Enzymatic generation of triplet acetone by deglycosylated horseradish peroxidase. Arch Biochem Biophys 1990; 276:527-30. [PMID: 2154952 DOI: 10.1016/0003-9861(90)90754-m] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
Abstract
A study of the effects of deglycosylation of horseradish peroxidase on protein conformation, as well as on its catalytic activity of oxidation of isobutyraldehyde or its enol form to triplet acetone and formic acid, was performed. The loss of carbohydrates leads to structural modifications of this enzyme. This is confirmed by a change in the circular dichroism spectrum, an increase in tryptophan's environment polarity, and a loss of the chiral specificity toward D- and L-tryptophan. Deglycosylation does not destroy either the peptide backbone or the amino acid residues and does not affect the heme group content of the protein. The rates of oxygen uptake and light emission observed when horseradish peroxidase oxidizes isobutyraldehyde or the trimethylsilyl enol ether form of the latter are reduced when the enzyme is 70% deglycosylated. Concomitantly, the acting deglycosylated enzyme becomes inactivated during the course of the reaction. It appears that the carbohydrate moiety plays an important role in the protection of the peroxidase from damaging effects induced by triplet acetone and in the stabilization of the three-dimensional structure of this enzyme.
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Affiliation(s)
- E Silva
- Facultad de Química, Pontificia Universidad Católica de Chile, Santiago
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10
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Morita A, Siddiqui B, Erickson RH, Kim YS. Glycoproteins and glycolipids of rat small intestinal microvillus and basolateral membranes. Dig Dis Sci 1989; 34:596-605. [PMID: 2702890 DOI: 10.1007/bf01536338] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 01/02/2023]
Abstract
Glycoprotein and glycolipid constituents were examined in purified microvillus and basolateral membranes isolated from rat small intestinal epithelial cells. SDS-polyacrylamide gel electrophoresis showed that the molecular weights of most of the major proteins from microvillus membranes were over 100 kD, whereas the majority of those from basolateral membranes tended to have lower molecular weights. Glycoprotein profiles were also examined using three labeling methods, and in each case marked differences were observed between microvillus and basolateral membranes. In both membranes, lectins with a specificity toward N-linked sugar chains bound to the majority of the glycoproteins, in contrast to those lectins which preferentially bind to O-linked sugar chains. Glycolipids were labeled in vivo and isolated from both membrane fractions. Some differences were observed in the fucolipids and neutral glycolipids suggesting a more complex pattern in microvillus membranes. These results indicate that there are differences in the glycoprotein and glycolipid compositions of microvillus and basolateral membranes that may reflect the functional polarity of intestinal epithelial cells.
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Affiliation(s)
- A Morita
- Gastrointestinal Research Laboratory, Veterans Administration Medical Center, San Francisco, California 94121
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11
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Mingrone G, Greco AV, Finotti E, Passi S. Free fatty acids: a stimulus for mucin hypersecretion in cholesterol gallstone biles. BIOCHIMICA ET BIOPHYSICA ACTA 1988; 958:52-9. [PMID: 3334867 DOI: 10.1016/0005-2760(88)90245-7] [Citation(s) in RCA: 25] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/05/2023]
Abstract
The concentration of free fatty acids, phosphatidylcholine and lysophosphatidylcholine, and the fatty acid composition as well as the levels of the mucins, analyzed by an improved GLC method, were examined in ten biles from patients with cholesterol gallstones (pathological biles) and in ten control biles. In pathological biles the amounts of free fatty acids and phosphatidylcholine, were significantly higher (8.99 +/- 1.09) vs. 2.75 +/- 0.62 micrograms/mg) and lower (6.62 +/- 0.71 vs. 21.91 +/- 3.86 micrograms/mg), respectively, than in control biles, indicating that a relationship exists between the two lipid fractions. Lysophosphatidylcholine concentrations remained unchanged in the two groups (1.02 +/- 0.55 micrograms/mg in pathological biles vs. 1.32 +/- 0.57 micrograms/mg in control biles). The increased levels of free fatty acids were directly correlated (r = 0.73, P less than 0.05) with biliary hypersecretion of mucus glycoproteins. Acetylglucosamine and acetylgalactosamine were significantly higher in pathological biles than in control biles (1.91 +/- 0.67 vs. 0.60 +/- 0.13 microgram/mg). The nucleating potency of the increased amounts of mucins, coupled with lowered levels of phosphatidylcholine, might play a very important role in stone formation and precipitation.
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Affiliation(s)
- G Mingrone
- Istituto di Clinica Medica, Catholic University, Rome, Italy
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12
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Campbell AG, Fessler LI, Salo T, Fessler JH. Papilin: a Drosophila proteoglycan-like sulfated glycoprotein from basement membranes. J Biol Chem 1987. [DOI: 10.1016/s0021-9258(18)45424-5] [Citation(s) in RCA: 40] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022] Open
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13
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Krusius T, Reinhold VN, Margolis RK, Margolis RU. Structural studies on sialylated and sulphated O-glycosidic mannose-linked oligosaccharides in the chondroitin sulphate proteoglycan of brain. Biochem J 1987; 245:229-34. [PMID: 3663149 PMCID: PMC1148104 DOI: 10.1042/bj2450229] [Citation(s) in RCA: 48] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/06/2023]
Abstract
We have previously described the structures of neutral and sialylated O-glycosidic mannose-linked tetrasaccharides and keratan sulphate polysaccharide chains in the chondroitin sulphate proteoglycan of brain. The present paper provides information on a series of related sialylated and/or sulphated tri- to penta-saccharides released by alkaline-borohydride treatment of the proteoglycan glycopeptides. The oligosaccharides were fractionated by ion-exchange chromatography and gel filtration, and their structural properties were studied by methylation analysis and fast-atom-bombardment mass spectrometry. Five fractions containing [35S]sulphate-labelled oligosaccharides were obtained by ion-exchange chromatography, each of which was eluted from Sephadex G-50 as two well-separated peaks. The apparent Mr values of both the large- and small-molecular-size fractions increased with increasing acidity (and sulphate labelling) of the oligosaccharides. The larger-molecular-size fractions contained short mannose-linked keratan sulphate chains of Mr 3000-4500, together with some asparagine-linked oligosaccharides. The smaller tri- to penta-saccharides, of Mr 800-1400, appear to have a common GlcNac(beta 1-3)Manol core, and to contain one to two residues of sialic acid and/or sulphate.
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Affiliation(s)
- T Krusius
- Department of Medical Chemistry, University of Helsinki, Finland
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14
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Krusius T, Finne J, Margolis RK, Margolis RU. Identification of an O-glycosidic mannose-linked sialylated tetrasaccharide and keratan sulfate oligosaccharides in the chondroitin sulfate proteoglycan of brain. J Biol Chem 1986. [DOI: 10.1016/s0021-9258(19)83901-7] [Citation(s) in RCA: 123] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022] Open
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15
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Englmaier P. Trifluoroacetylation of carbohydrates for g.l.c., using N-methylbis(trifluoroacetamide). Carbohydr Res 1985. [DOI: 10.1016/s0008-6215(00)90667-0] [Citation(s) in RCA: 16] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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16
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Cell-free sulfation of human and bovine pituitary hormones. Comparison of the sulfated oligosaccharides of lutropin, follitropin, and thyrotropin. J Biol Chem 1985. [DOI: 10.1016/s0021-9258(17)36305-6] [Citation(s) in RCA: 35] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022] Open
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17
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Willick GE, Seligy VL. Multiplicity in cellulases of Schizophyllum commune. Derivation partly from heterogeneity in transcription and glycosylation. EUROPEAN JOURNAL OF BIOCHEMISTRY 1985; 151:89-96. [PMID: 4040855 DOI: 10.1111/j.1432-1033.1985.tb09072.x] [Citation(s) in RCA: 37] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]
Abstract
The white-rot fungus, Schizophyllum commune, secretes a member of each of three classes of cellulases: a beta-glucosidase, an exoglucanase, and an endoglucanase. Antibodies were developed to members of each of these three enzyme classes. Secretion of these cellulases is induced when a mycelium is transferred from a glucose to cellulose medium. The maximum level of cellulase transcripts, as indicated by the ability to direct biosynthesis of these cellulases in the rabbit reticulocyte cell-free translation system, occurred when the rate of secretion was maximum. This implied that initial regulation, at least, of cellulase biosynthesis occurs at the transcriptional level. There were two distinct mRNA-directed products for each of the cellulases, with sizes estimated to be, for the beta-glucosidase, 95700 and 93800, for the exoglucanase, 59300 and 58200, and for the carboxymethylcellulase, 40600 and 39400. The secreted cellulases are largely glycosylated, as indicated by their binding to concanavalin A and their incorporation of D-[3H]mannose. The labelled protein was fractionated on concanavalin-A-agarose; about 70% of the label was bound. A small amount of each of the cellulases appeared in the unbound fraction; the remainder appeared in fractions eluted with 10 mM methyl glucoside or with 100 mM methyl glucoside plus 500 mM methyl mannoside. These results indicated each of the cellulases had an additional heterogeneity in glycosylation, with the most heavily glycosylated and highest molecular weight form eluting last from the concanavalin-A-agarose. Although tunicamycin (5 micrograms/ml) blocked glycosylation, there was still some secretion but at a reduced rate which was more pronounced for the beta-glucosidase than for the carboxymethylcellulase activity. The size of the tunicamycin-secreted product in each case was, within experimental error, equivalent to that of the mRNA-directed one.
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18
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Park CM, Reid PE, Applegarth DA. Evidence for the degradation of sugars during the resin hydrolysis of glycoproteins. JOURNAL OF CHROMATOGRAPHY 1985; 339:182-5. [PMID: 2410435 DOI: 10.1016/s0378-4347(00)84641-1] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.0] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
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19
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Strickland TW, Thomason AR, Nilson JH, Pierce JG. The common alpha subunit of bovine glycoprotein hormones: limited formation of native structure by the totally nonglycosylated polypeptide chain. J Cell Biochem 1985; 29:225-37. [PMID: 2416766 DOI: 10.1002/jcb.240290307] [Citation(s) in RCA: 19] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
Abstract
The folding of the bovine glycoprotein hormone alpha subunit, synthesized in bacteria following insertion of the nucleotide sequence coding for this polypeptide, has been studied to determine the effect that a complete lack of carbohydrate has on this process. The bacterially derived alpha polypeptide (bac-alpha), extracted from E. coli in the presence of reductant and denaturant, had an estimated 0.2% native structure as determined by a conformationally sensitive radioimmunoassay. Upon reduction of disulfide bonds and reoxidation in air, the amount of native structure increased about 18-fold. Approximately 2% of the refolded bac-alpha preparation combines with the beta subunit of human chorionic gonadotropin (hCG beta) to form a complex that binds to the gonadotropin receptor and elicits a biological response. Since the correct folding (by immunological criteria) of bac-alpha (ca 3%) is significantly greater than expected from a random formation of disulfide bonds (0.1%), it appears that correct folding of alpha subunit can occur in the complete absence of carbohydrate, though in very low yield. Native bovine lutropin alpha subunit (LH alpha) and chemically deglycosylated LH alpha (which retains two asparagine-linked N-acetyl glucosamine residues per alpha oligosaccharide) were subjected to the same reduction/reoxidation regimen as the bacterially produced alpha subunit. As has been reported previously [Giudice LC, Pierce, JG, J Biol Chem 251: 6392, 1976] intact LH alpha fully regained its native structure. The partially deglycosylated LH alpha also refolds to a native-like structure in high yield as assessed by immunological assays and by its ability to combine with HCG beta to form a biologically active complex. The data show that carbohydrate, while not obligatory for correct folding, greatly facilitates the formation of functional alpha subunit.
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20
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Liu WK, Young JD, Ward DN. Deglycosylated ovine lutropin: preparation and characterization by in vitro binding and steroidogenesis. Mol Cell Endocrinol 1984; 37:29-39. [PMID: 6088328 DOI: 10.1016/0303-7207(84)90125-4] [Citation(s) in RCA: 28] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 01/18/2023]
Abstract
Ovine lutropin (oLH) subunits were deglycosylated in anhydrous hydrofluoric acid. All possible combinations of native and deglycosylated alpha- and beta-subunits were prepared and characterized. The two native plus deglycosylated counterpart preparations showed properties intermediate between the native only and the deglycosylated subunit hybrid. For brevity, only the properties of the latter hybrid were described in detail. Deglycosylation did not alter subunit-subunit recombination, protein conformation (circular dichroism) or the peptide chains (N-termini). Deglycosylation enhanced receptor-binding activity, but the carbohydrate moieties are important for maximal steroidogenesis (Leydig cell testosterone production). The deglycosylated hybrid molecule acts as an antagonist or agonist to native hormone action depending on the test system and conditions. The deglycosylated hormone binds to the receptor much more rapidly than the native hormone and binding plateaued at a higher level in the case of the deglycosylated hormone, although cross-labeling of tracers (either native or deglycosylated) indicated that competition was for the same type of receptors. To eliminate internalization of the hormone as a factor in the binding studies we used broken cell (membrane) preparations of Leydig cells. Differences in the preparations are thus attributable to a greater 'on-rate' for the deglycosylated hormone. The 'off-rate' from the receptor was essentially equal for both native and deglycosylated hormones. For this reason the deglycosylated hormone has only limited antagonistic action for native hormone activity.
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21
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Free alpha-like material from bovine pituitaries. Removal of its O-linked oligosaccharide permits combination with lutropin-beta. J Biol Chem 1984. [DOI: 10.1016/s0021-9258(17)43405-3] [Citation(s) in RCA: 30] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022] Open
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22
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Van der Walt B, Kotze B, Edelhoch H, Van Jaarsveld PP. Characterization of the major polypeptide chains of reduced bovine thyroglobulin. BIOCHIMICA ET BIOPHYSICA ACTA 1983; 744:90-8. [PMID: 6830825 DOI: 10.1016/0167-4838(83)90344-8] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/22/2023]
Abstract
The finding that reduced 19S bovine thyroglobulin showed two major, closely migrating polypeptide bands during electrophoresis in SDS-polyacrylamide gels was presented as evidence that thyroglobulin consists of two nonidentical subunits, referred to as S and F, of approximately the same size (J. Biol. Chem. 253, 1853-1858 (1978)). It was, however, not clear whether the difference in migration rates of the two subunits was due to differences in amino acid or carbohydrate composition or a small difference in size. In this study, several physical and chemical properties of purified S and F polypeptides were investigated. Three methods revealed important differences between them. It was found by cyanogen bromide degradation that S contained one fragment (Mr approximately equal to 20 000) more than F. S eluted ahead of F by column chromatography in SDS. The sedimentation coefficient of S was found to be greater than that of F. However, the two subunits were shown to have similar amino acid and carbohydrate compositions and to be indistinguishable in their interaction with SDS. The different migration rates of S and F can therefore be explained by a small difference in size which agrees with the finding (Endocrinology 108, 1285-1292 (1981)) that a proteolytic enzyme present in commercial horseradish peroxidase can convert S into F.
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Fox A, Morgan SL, Hudson JR, Zhu ZT, Lau PY. Capillary gas chromatographic analysis of alditol acetates of neutral and amino sugars in bacterial cell walls. J Chromatogr A 1983; 256:429-38. [PMID: 6341386 DOI: 10.1016/s0021-9673(01)88260-1] [Citation(s) in RCA: 49] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/19/2023]
Abstract
Several improvements in the preparation of alditol acetates of neutral and amino sugars and in the preparation of glass capillary columns for their separation are described. Modifications in sample preparation permitted the simultaneous processing of multiple samples and eliminated extraneous background peaks. Efficient and inert columns were tailor-made for the separation of alditol acetates of neutral and amino sugars by leaching glass capillaries with aqueous hydrochloric acid and dynamically coating with SP-2330.
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24
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Purification of an alternate form of the alpha subunit of the glycoprotein hormones from bovine pituitaries and identification of its O-linked oligosaccharide. J Biol Chem 1983. [DOI: 10.1016/s0021-9258(18)33247-2] [Citation(s) in RCA: 59] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022] Open
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25
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Enzymatic deglycosylation of the subunits of chorionic gonadotropin. Effects on formation of tertiary structure and biological activity. J Biol Chem 1982. [DOI: 10.1016/s0021-9258(18)33393-3] [Citation(s) in RCA: 74] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022] Open
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26
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Hudson JR, Morgan SL, Fox A. High resolution glass capillary columns for the gas chromatographic analysis of alditol acetates of neutral and amino sugars. ACTA ACUST UNITED AC 1982. [DOI: 10.1002/jhrc.1240050602] [Citation(s) in RCA: 16] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
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27
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Inoue T, Kobatake H, Okahira A, Iwakawa J, Nakano K. Identification of D-mannosamine in lipopolysaccharide derived from a strain ofFusobacterium necrophorum. FEMS Microbiol Lett 1982. [DOI: 10.1111/j.1574-6968.1982.tb08301.x] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022] Open
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28
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Butkowski RJ, De A. Preparation and composition of mouse tubular and glomerular basement membranes. PREPARATIVE BIOCHEMISTRY 1982; 12:209-27. [PMID: 7145870 DOI: 10.1080/00327488208065563] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/23/2023]
Abstract
Methods were developed to obtain tubules and glomeruli and their respective basement membranes from mouse kidneys. While the procedures are especially useful for preparing tubules, one method can be used to simultaneously prepare both tubules and glomeruli. Tubules can be obtained from single animals, while a minimum of five animals are required in order to prepare glomeruli. Either minced whole kidneys or dissected cortex tissue is dispersed using a polytron and the desired fractions are obtained by sucrose density gradient centrifugation. discontinuous gradients consisting of 49.5, 53, 57, and 60% sucrose are used in the first method. Following centrifugation, tubules are collected on the 49.5% sucrose layer and glomeruli are pelleted on the bottom of the tube. In the second method, disrupted tissue is mixed with 57% sucrose and after centrifugation a layer of pure tubules is obtained from the top of the sucrose solution. Basement membranes are then obtained by a sonication method and the average yields per kidney are 0.1 mg and 0.02 mg for tubular and glomerular basement membranes respectively. Their chemical compositions are similar to the respective basement membranes from other species.
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Abstract
An alpha-L-fucosidase (alpha-L-fucoside fucohydrolase, EC 3.2.1.51) has been isolated from porcine thyroid tissue and purified 10,800-fold using a combination of ion exchange, affinity and molecular sieve chromatography. The enzyme appears homogeneous by SDS electrophoresis but isoelectric focusing procedures detect considerable heterogeneity. The enzyme is a glycoprotein and this fact interferes with accurate molecular weight estimates by SDS electrophoresis or molecular sieve techniques. The enzyme appears, however, to be a tetramer and density gradient measurements set its molecular weight at 192,000 +/- 3,000. The enzyme exhibits an optimum at a pH of 5.1 and shows a high order of specificity for L-fucose units linked through alpha bonds. Both sulfhydryl and carboxyl groups appear necessary for enzyme activity. The enzyme does not attack intact thyroglobulin directly but will remove fucosyl residues from the glycone moiety if the protein portion is largely removed. The enzyme thus functions in a salvage role as thyroglobulin is degraded.
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30
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Thyroglobulin structure-function. Isolation and characterization of a thyroxine-containing polypeptide from bovine thyroglobulin. J Biol Chem 1981. [DOI: 10.1016/s0021-9258(19)68778-8] [Citation(s) in RCA: 37] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
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31
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Lee GJ, Liu DW, Pav JW, Tieckelmann H. Separation of reduced disaccharides derived from glycosaminoglycans by high-performance liquid chromatography. J Chromatogr A 1981; 212:65-73. [PMID: 6790557 DOI: 10.1016/s0021-9673(00)80547-6] [Citation(s) in RCA: 26] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/21/2023]
Abstract
A high-performance liquid chromatographic (HPLC) method for the analysis of reduced unsaturated disaccharides derived from enzymatic digestion followed by reduction with sodium borohydride of chondroitin sulfates, dermatan sulfate, heparan sulfate and heparin is described. This method is well suited for the HPLC analysis of glycosaminoglycans (GAGs) because the possibility of obtaining anomeric forms of unsaturated disaccharides is eliminated with provides a major advantage for quantitation. This procedure is more sensitive than existing HPLC methods for the determination of enzymatic degradation products from GAGs. In particular, the resolution of disaccharide products from heparan sulfate is improved after reduction. The applicability of this method for the determination of GAGs in biological samples is demonstrated.
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Butkowski R, Brungardt G, Grantham J, Hudson B. Characterization of the collagenous domain of tubular basement membrane. J Biol Chem 1981. [DOI: 10.1016/s0021-9258(19)69004-6] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022] Open
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Merkel SJ, Kaneshiro ES, Gruenstein EI. Characterization of the cilia and ciliary membrane proteins of wild-type Paramecium tetraurelia and a pawn mutant. J Biophys Biochem Cytol 1981; 89:206-15. [PMID: 7251650 PMCID: PMC2111681 DOI: 10.1083/jcb.89.2.206] [Citation(s) in RCA: 44] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/24/2023] Open
Abstract
Cilia and ciliary membranes were isolated from axenically grown, wild-type Paramecium tetraurelia strain 51s and from the extreme pawn mutant strain, d495, derived from this parental strain. Over 60 protein bands having molecular weights of 15 to greater than 300 kdaltons were detected by Coomassie Blue staining of whole cilia proteins separated by one-dimensional SDS polyacrylamide gel electrophoresis. About 30 of these protein bands were visible in Coomassie Blue-stained membrane separations. About 60 bands were detected by silver staining of one-dimensional gels of membrane proteins. Differences between Coomassie Blue-stained separations of wild-type and pawn mutant strain d495 membrane proteins were seen in the quantity of a band present at 43 kdaltons. Radioiodination of cell surface proteins labeled approximately 15 protein bands in both wild-type and mutant cilia. The major axonemal proteins were unlabeled. Six membrane glycoproteins were identified by staining one-dimensional separations with iodinated concanavalin A and lentil lectin, two lectins that specifically bind both glucose and mannose residues. Two major neutral sugar species present in an acid hydrolysate of the cilia preparation were tentatively identified as glucose and mannose by gas chromatography of the alditol acetate derivatives.
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The purification and molecular characterisation of a putative nicotinic-muscarinic acetylcholine receptor from housefly heads. ACTA ACUST UNITED AC 1981. [DOI: 10.1016/0020-1790(81)90070-6] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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Abstract
Glycoproteins have become increasingly important in the structure and function of many different mammalian systems; for example, membrane glycoproteins and glycoprotein hormones. It is, therefore, important to understand their chemistry, which would include an understanding of both the carbohydrate and protein parts of the molecule. Since the chemical characterization of the protein moiety has been extensively examined and the techniques for its characterization are well worked out, only the carbohydrate portion of glycoproteins will be reviewed in this article. The chemical nature of the carbohydrate moiety of glycoproteins will be examined. First, the types of monosaccharides present in animal systems, especially those in the mammalian systems, will be described. Next, various types of simple and complex carbohydrate chains will be discussed to establish the diversity, size, and number of chains present in the carbohydrate units in different glycoproteins. Then, the type of linkages of the carbohydrate to the protein will be examined to determine if the primary sequence of protein is important in determining the size and type of carbohydrate chains present in glycoproteins. Finally, the current methods of structural elucidation such as monosaccharide sequence, intersugar bonds, and anomeric linkages in the carbohydrate moiety of glycoproteins will be reviewed. These methods include the techniques of periodate oxidation, methylation, partial acid hydrolysis, and specific glycosidase digestion of glycoproteins, as well as the latest techniques using micromethods of carbohydrate quantitation and characterization involving gas chromatography and mass spectrometry. The function of the carbohydrate in glycoproteins will also be considered. First, hormone glycoproteins will be discussed in their relationship to the immunological and biological function of the glycoprotein when the carbohydrate is sequentially removed. Next, the function of the carbohydrate in the turnover of glycoproteins will be discussed. These topics will be considered in order to develop an understanding of a specific function(s) of the carbohydrate in glycoproteins.
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Torello LA, Yates AJ, Thompson DK. Critical study of the alditol acetate method for quantitating small quantities of hexoses and hexosamines in gangliosides. J Chromatogr A 1980; 202:195-209. [PMID: 7462362 DOI: 10.1016/s0021-9673(00)81728-8] [Citation(s) in RCA: 48] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/25/2023]
Abstract
An extensive investigation of and improvement in the method for quantitating the carbohydrates of glycolipids by the gas--liquid chromatography of their alditol acetate derivatives is described. The effects of duration and temperature of hydrolysis, neutralization after hydrolysis, and acetylation time and temperature on the relative detector responses of mixtures of free as well as ganglioside hexoses and hexosamines were extensively studied. It is concluded that optimum results are obtained with the following conditions: hydrolysis at 100 degree C for 8 to 12 h, a 40--60 min reduction, acetylation at 100 degree C for 30 min. When quantitating the carbohydrate components of gangliosides, the most reliable results will be obtained using as an external standard a glycolipid whose chemical structure is similar to that of the sample. Using this procedure, reliable results can be obtained with the initial glycolipid sample containing as little as 1 microgram of each sugar.
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Parsons TF, Pierce JG. Oligosaccharide moieties of glycoprotein hormones: bovine lutropin resists enzymatic deglycosylation because of terminal O-sulfated N-acetylhexosamines. Proc Natl Acad Sci U S A 1980; 77:7089-93. [PMID: 6938955 PMCID: PMC350446 DOI: 10.1073/pnas.77.12.7089] [Citation(s) in RCA: 82] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/22/2023] Open
Abstract
The oligosaccharides of the bovine pituitary gonadotropin lutropin are N-linked to asparagine residues. These carbohydrates are unusual in that, although they contain the mannose, N-acetylglucosamine, and fucose typical of N-linked oligosaccharides, they also contain one residue of N-acetylgalactosamine but insignificant amounts of sialic acid or galactose. These oligosaccharides exhibit complete resistance to several exoglycosidases. This is in contrast to the ready release of peripheral sugars from human chorionic gonadotropin, a placenta hormone which has oligosaccharides of the complex type with terminal sialic acid and galactose residues. Stability of the lutropin hexosamines to periodate oxidation and reduction (Smith degradation) together with other data show that one residue of N-acetylgalactosamine and one of N-acetylglucosamine are peripheral to two periodate-sensitive mannose residues. The insensitivity to periodate of these two terminal amino sugars is found to result from a sulfate group covalently linked to each; sulfation of these hexosamines is also the most probable reason for the resistance to enzymatic deglycosylation. The alpha subunits of bovine thyrotropin and human pituitary lutropin also contain sulfate, in contrast to human chorionic gonadotropin. The results indicate that sulfating enzymes are present in the pituitary and that sulfation of peripheral sialic acids in the placental gonadotropin. The data lead to a partial structure for the oligosaccharides of bovine LH as follows: (formula see text).
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Selsted ME, Martinez RJ. Microbicidal and cytotoxic properties of soluble components from quaternary aminoethyl-sephadex. Infect Immun 1980; 30:887-9. [PMID: 7228393 PMCID: PMC551397 DOI: 10.1128/iai.30.3.887-889.1980] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/24/2023] Open
Abstract
Soluble material released during hydration and equilibration of a quaternary aminoethyl-Sephadex anion exchanger was found to be toxic for a variety of cell types. Among these were gram-positive and gram-negative bacteria, fungi, and a murine cell line. The material was also found to interfere with the spectrophotometric enzymatic determination of lysozyme.
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Separation of monosaccharides as their alditor acetates by capillary column gas-liquid chromatography. J Chromatogr A 1980. [DOI: 10.1016/s0021-9673(00)81432-6] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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Resolution of the charge forms and amino acid sequence and location of a tryptic glycopeptide in rat alpha-lactalbumin. J Biol Chem 1979. [DOI: 10.1016/s0021-9258(19)86563-8] [Citation(s) in RCA: 23] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022] Open
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Novel mannitol-containing oligosaccharides obtained by mild alkaline borohydride treatment of a chondroitin sulfate proteoglycan from brain. J Biol Chem 1979. [DOI: 10.1016/s0021-9258(19)86708-x] [Citation(s) in RCA: 90] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
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45
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Hayes M, Castellino J. Carbohydrate of the human plasminogen variants. I. Carbohydrate composition, glycopeptide isolation, and characterization. J Biol Chem 1979. [DOI: 10.1016/s0021-9258(19)86763-7] [Citation(s) in RCA: 99] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022] Open
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Ng Ying Kin NM, Wolfe LS. Urinary excretion of a novel hexasaccharide and glycopeptide analogue in fucosidosis. Biochem Biophys Res Commun 1979; 88:696-705. [PMID: 465063 DOI: 10.1016/0006-291x(79)92104-1] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
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48
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Rawitch AB, Taurog A, Chernoff SB, Dorris ML. Hog thyroid peroxidase: physical, chemical, and catalytic properties of the highly purified enzyme. Arch Biochem Biophys 1979; 194:244-57. [PMID: 443801 DOI: 10.1016/0003-9861(79)90615-5] [Citation(s) in RCA: 68] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
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Gehrke CW, Waalkes T, Borek E, Swartz WF, Cole TF, Kuo KC, Abeloff M, Ettinger DS, Rosenshein N, Young RC. Quantitative gas—liquid chromatography of neutral sugars in human serum glycoproteins. ACTA ACUST UNITED AC 1979. [DOI: 10.1016/s0378-4347(00)81831-9] [Citation(s) in RCA: 24] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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Ward DN, Desjardins C, Moore WT, Nahm HS. Rabbit lutropin: preparation, characterization of the hormone, its subunits and radioimmunoassay. INTERNATIONAL JOURNAL OF PEPTIDE AND PROTEIN RESEARCH 1979; 13:62-70. [PMID: 422325 DOI: 10.1111/j.1399-3011.1979.tb01850.x] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
Abstract
The purification of rabbit lutropin is described. A product with a potency of 1.53 X NIH-LH-Sl was obtained as assayed by the ovarian ascorbic acid depletion assay. In a homologous radioimmunoassay, which is described, rabbit lutropin has a potency 4.83 X NIH-LH-Sl. In a radioligand assay, utilizing labeled ovine lutropin as the trace, the relative potency was 0.47 X NIH-LH-Sl measured by 50% inhibition comparison since rabbit lutropin response in this system did not parallel ovine lutropin. A counter-current distribution procedure for separation of rabbit lutropin subunits is described. Amino acid composition of the isolated subunits and intact rabbit lutropin was determined. The carbohydrate composition of the latter is presented; only amino sugar determinations are available for the subunits. The NH2-terminal amino acids are phenylalanine (alpha subunit) and alanine (beta subunit). Preliminary data on COOH-terminal amino acids are provided.
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