Evaluation of lignin contents in tropical forages using different analytical methods and their correlations with degradation of insoluble fiber

Carbon Fate, Iron Dissolution, and Molecular Characterization of Dissolved Organic Matter in Thawed Yedoma Permafrost under Varying Redox Conditions

Permafrost soils store ∼50% of terrestrial C, with Yedoma permafrost containing ∼25% of the total C. Permafrost is undergoing degradation due to thawing, with potentially hazardous effects on landscape stability and water resources. Complicating ongoing efforts to project the ultimate fate of deep permafrost C is the poorly constrained role of the redox environment, Fe-minerals, and its redox-active phases, which may modulate organic C-abundance, composition, and reactivity through complexation and catalytic processes. We characterized C fate, Fe fractions, and dissolved organic matter (DOM) isolates from permafrost-thaw under varying redox conditions. Under anoxic incubation conditions, 33% of the initial C was lost as gaseous species within 21 days, while under oxic conditions, 58% of C was lost. Under anoxic incubation, 42% of the total initial C was preserved in a dissolved fraction. Lignin-like compounds dominated permafrost-thaw, followed by lipid- and protein-like compounds. However, under anoxic incubation conditions, there was accumulation of lipid-like compounds and reduction in the nominal oxidation state of C over time, regardless of the compound classes. DOM dynamics may be affected by microbial activity and abiotic processes mediated by Fe-minerals related to selective DOM fractionation and/or its oxidation. Chemodiversity DOM signatures could serve as valuable proxies to track redox conditions with permafrost-thaw.

Lignin Analysis by HPLC and FTIR: Spectra Deconvolution and S/G Ratio Determination

Fourier transform infrared spectroscopy (FTIR) is a simple nondestructive technique that allows the user to obtain quick and accurate information about the structure of the constituents of wood. Spectra deconvolution is a computational technique, complementary to FTIR analysis, which improves the resolution of overlapped or unobserved bands in the raw spectra. High performance liquid chromatography (HPLC) is an analytical technique useful to determine the ratio of the lignin monomers obtained by the alkaline nitrobenzene oxidation method. Furthermore, lignin content has been commonly determined by wet chemical methods; Klason lignin determination is a quick and accessible method. Here, we detail the procedures for chemical analysis of the wood lignin using these techniques. Additionally, the deconvolution process of FTIR spectra for the determination of the S/G ratio, in lignin isolated by this or other methods, is explained in detail.

Effect of energy supplementation on intake, digestibility of diets and performance of grazing lambs during the rainy season

This study aimed to evaluate different energy sources in multiple supplements on performance, intake, and digestibility of Santa Ines sheep grazing urochloa grass (Urochloa mosambicensis) during the rainy season. The experimental area was divided into seven paddocks of 4 ha each, with an average of dry matter (DM) availability of 3.21 tn/ha. A completely randomized design was carried out, in which there were four treatments, and each treatment was repeated six times. Twenty-four intact lambs (average: 32.0 kg of body weight) were supplemented with a mineral mixture, the control group (MM), mesquite pod meal (MPM), wheat bran (WB), or sorghum grain (SG) as energy sources. The digestibility of DM and crude protein (CP) in MPM and WB is higher than that in MM and SG groups. Neutral detergent fiber (NDF) digestibility was similar between supplemented lambs, and it was higher than the MM. The supplementation promoted higher weight gain than in the control group (0.126 vs. 0.061 g/day, respectively; P < 0.001). The supplementation increased the DM, and CP intake. The NDF intake only increased in the WB group. The CP digestibility was higher for the MPM and WB groups than that for MM and SG ones (P < 0.001). Sheep supplementation in the rainy season increased the average daily gain (ADG). Any supplement tested in the present study can be used during the rainy season. The choice for the supplement will depend on the availability and costs of the mesquite pod meal, sorghum grain, or wheat bran.

The Effects of Oil Palm Fronds Silage Supplemented with Urea-Calcium Hydroxide on Rumen Fermentation and Nutrient Digestibility of Thai Native-Anglo Nubian Goats

This study aimed to examine the combined effects of urea and calcium hydroxide ensiled oil palm fronds on rumen fermentation and digestibility of Thai native-Anglo Nubian goats. A 4 × 4 Latin square design was used to randomly assign four male crossbred goats (Thai native × Anglo Nubian). The dietary treatments were as follows: ensiled oil palm frond with no additives (EOPF as the control), urea 5% (50 g/kg fresh matter) (E-UOPF 5%), calcium hydroxide (Ca(OH)2) 5% (50 g/kg fresh matter) (E-CaOPF 5%), and combination of urea 2.5% (25 g/kg fresh matter) with Ca(OH)2 (25 g/kg fresh matter) (E-UCOPF 2.5%). The oil palm frond ensiled with different additives did not change the DM intake (p > 0.05). The total TMR intakes range from 69.39 to 77.09 g/kg BW0.75. The goats fed with E-UOPF 5.0% consumed significantly more CP than the other groups (p < 0.05). The E-UCOPF increased ME intake by 4.8%, compared with the control treatment (p < 0.05). E-UOPF 5% and E-UCOPF 2.5% significantly increased the CP digestibility by 19.7% and 17.1%, respectively (p < 0.05). Furthermore, E-CaOPF 5.0% and E-UCOPF 2.5% improved the NDF digestibility by about 10.9% and 9.90%, respectively (p < 0.05). The urea-containing oil palm frond (E-UOPF 5.0% and E-UCOPF 2.5%) had higher blood urea nitrogen (BUN) than the other groups (p < 0.05). The TVFA of goats fed E-UCOPF 2.5% was approximately 15.8% higher than that of goats provide EOPF (p < 0.05). The mean concentration of C3 increased by 7.90% and 11.61%, respectively, when E-CaOPF 5.0% and E-UCOPF 2.5% were provided instead of EOPF (p < 0.05). The total N intake and absorbed were highest (p < 0.05) when goats offered E-UOPF 5.0% (p < 0.05). The goats fed oil palm frond without additives had the lowest percentage of N-absorption/N intake (p < 0.05). This study clearly shows that the most suitable treatment is E-UCOPF 2.5%, which enhances DMD, nutrient digestibility, TVFAs, and nitrogen balance and has no negative effects on rumen microbes. This indicates that E-UCOPF 2.5% may be utilized as an alternate roughage source in TMR diets, accounting for at least 40% of the OPF. However, several factors still require consideration for urea-Ca(OH)2 treatments to be successful, including other concentrations of urea, moisture content, duration of pre-treatment, and the metabolizable protein system.

Predictive Modeling of Lignin Content for the Screening of Suitable Poplar Genotypes Based on Fourier Transform-Raman Spectrometry

The quick and non-invasive evaluation of lignin from biomass has been the focus of much attention. Several types of spectroscopies, for example, near-infrared (NIR) and Fourier transform-Raman (FT-Raman), have been successfully applied to build quantitative predictive lignin models based on chemometrics. However, due to the effect of sample moisture content and ambient humidity on its signals, NIR spectroscopy requires sophisticated pre-testing preparation. In addition, the current FT-Raman predictive models require large variations in the independent value inputs as restrictions in the corresponding mathematical algorithms prevent the effective biomass screening of suitable genotypes for lignin contents within a narrow range. In order to overcome the limitations associated with the current methods, in this paper, we employed Raman spectra excited using a 1064 nm laser, thus avoiding the impact of water and auto-fluorescence on NIR signals. The optimal baseline correction method, data type, mathematical algorithm, and internal reference were selected in order to build quantitative lignin models based on the data with limited variation. The resulting two predictive models, constructed through lasso and ridge regressions, respectively, proved to be effective in assessing the lignin content of poplar in large-scale breeding and genetic engineering programs.

Effects of Urtica cannabina to Leymus chinensis Ratios on Ruminal Microorganisms and Fiber Degradation In Vitro

The study was conducted in vitro to investigate the effects of different ratios of Urtica cannabina and Leymus chinensis on fiber microstructure and digestibility in ruminal fluid. The experiment was divided into five groups based on the U. cannabina/L. chinensis ratios: A (0:100), B (30:70), C (50:50), D (70:30), and E (100:0). The culture medium was collected at 0, 1, 3, 6, 12, and 24 h. The results showed that: (1) in vitro crude protein degradability (IVCPD) was higher in group A, whereas in vitro neutral detergent fiber degradability (IVNDFD) was higher in group C (p < 0.05); (2) protozoa count was increased from 1 h to 3 h and decreased afterwards, with significant differences observed in several genera (p < 0.05); (3) microbial crude protein (MCP) contents at 1, 3, 6, and 24 h were higher in groups A and C (p < 0.05); (4) the basic tissue of U. cannabina was gradually degraded. At 24h, the secondary xylem vessel structure was observed in groups B and C, but not in groups D and E. In summary, there was higher neutral detergent fiber (NDF) digestibility, higher rumen MCP contents, and lower protozoa count, showing the significance of the 50:50 ratio for microbial growth and fiber digestibility.

Activation of lignin by selective oxidation: An emerging strategy for boosting lignin depolymerization to aromatics

Lignin is the most abundant, renewable aromatic resource on earth and holds great potential for the production of value-added chemicals. The efficient valorization of lignin requires to deal with several formidable challenges, especially to prevent it from re-condensation reactions during its depolymerization. Recently, a strategy involving the activation of lignin side chains by selective oxidation of the benzylic alcohol in β-O-4 linkages to facilitate lignin degradation to aromatic monomers has become very popular. This strategy provides great advantages for lignin selective degradation to high yields of aromatics under mild conditions, but requires an additional pre-oxidation step. The purpose of this review is to provide the latest cutting-edge innovations of this novel approach. Various catalytic systems, including those using chemo-catalytic methods, physio-chemo catalytic methods, and/or bio-catalytic methods, for the oxidative activation of lignin side chains are summarized. By analyzing the current situation of lignin depolymerization, certain promising directions are emphasized.

Effects of exogenous amylase on the in vitro digestion kinetics of whole-crop maize silages made from flint or dent grain type at different phenological stages grown in tropical condition

The effect of exogenous amylase on the in vitro rumen digestion kinetics of whole-crop maize silage made from dent (RB9004) or flint grain type (RB9308) was evaluated at different phenological stages: soft dough (SOD), early dent (EAD), ½ milkline (½M) and ¾ milkline (¾M). Forage was harvested from 70 to 110 days after sowing. Two rumen-cannulated cows receiving or not exogenous amylase (0.7 g/kg dry matter-DM, provided to achieve 396 kilo Novo units of amylase activity/kg of TMR DM) were used as donor of ruminal fluid. The in vitro gas production kinetics was evaluated according to a dual-pool logistic model. The chemical composition and gas production kinetics were affected by the hybrid and phenological stages. The flint hybrid had lower range for chemical analysis among physiological stages. Harvesting at ½M and ¾M improved DM content, bromatological composition and silage quality parameters compared to dent or flint types. Amylase (i) increased methane (CH₄ ) production and in vitro dry matter digestibility (IVDMD) in ½M stage, (ii) improved digestion kinetics by reducing lag time and increasing total gas production and fermentation rates of non-fibrous carbohydrates (NFC) and fibrous carbohydrates (FC), and (iii) increased extent and fermentation rate of NFC and increased fermentation rate of FC fraction in whole-crop maize silages produced from dent or flint types in all phenological stages. Harvesting between ½M and ¾M is the best phenological stage to improve chemical composition and silage quality parameters. Exogenous amylase showed improvements on fibre digestion of silages at ½M and ¾M phenological stages in both grain types of corn.

Valorisation of the invasive species, Prosopis juliflora, using the carboxylate platform to produce volatile fatty acids

Biomass derived from low-value, high-volume invasive plant species is an attractive, alternative feedstock to produce biofuels and biochemicals. This study aimed to use the carboxylate platform to valorize the invasive leguminous shrub, Prosopis juliflora (Mesquite), by utilizing in vitro rumen fermentations without chemical pretreatment to produce volatile fatty acids. The three fractions of the mesquite: leaves (ProL), stems (ProS) and branches (ProB) were compared regarding chemical composition, neutral detergent fiber (NDF) digestibility at 7 time points and VFA production after 72 h with sugarcane bagasse (SCB) as a reference. NDF digestibility was significantly (P < 0.05) higher in ProL (35.8%) than ProS (30.4%) and ProB (20.9%) compared to SCB (21.9%). VFA concentrations from 20 g biomass L^-1 showed significant differences with 8.07, 6.71 and 6.51 g L^-1 for ProL, ProS and ProB respectively, while SCB yielded 4.02 g L^-1. These concentrations were comparable with other platforms that employ chemically pretreated biomass for VFA production.

In Vitro Digestibility Measurement of Feedstuffs in Donkeys Using the DaisyII Incubator

Successful studies on in vitro digestibility measurement of feedstuffs with fecal inoculum have been reported for horses, whereas data on donkeys are currently lacking. In this study, we evaluated the use of the Daisy^II Incubator for in vitro digestibility measurement of feedstuffs using donkey feces as source of microbial inoculum. The method was tested using seven feedstuffs commonly used in donkey diets (alfalfa, bromegrass, ryegrass, and timothy hays; wheat bran and wheat straw; barley grains). Feces were obtained from four female donkeys, and incubations were carried out at 1-week intervals for four consecutive weeks. Two bags of each feedstuff were incubated in digestion vessels containing a buffer/feces solution (90:10). In vitro apparent dry matter digestibility (DMD), true dry matter digestibility (IVTD), and neutral detergent fiber digestibility (NDFD) were evaluated at four incubation times: 30, 48, 60, and 72 hours. All digestibility parameters significantly increased from 30 to 72 hours of incubation. At 72 hours of incubation, the within-laboratory repeatability and reproducibility of the method were 2.7% and 5.0% for DMD and 1.6% and 3.9% for IVTD, respectively. The method was less repeatable and reproducible for NDFD (4.5% and 10.4%, respectively).

In vitro screening of plants from the Brazilian Caatinga biome for methanogenic potential in ruminant nutrition

Thirty-nine plants naturally found in Brazilian Caatinga semiarid biome were screened using an in vitro fermentability testing focused in apparent organic matter digestibility (aOMD), gas, methane (CH₄), and short-chain fatty acid (SCFA) production. Three independent in vitro runs were carried out and plants were classified by CH₄ concentration as proportion of gas and per unit of apparent digested organic matter (aDOM). According to its CH₄ concentration on produced gas (mL/L), the plants were classified as low (> 110), medium (from 60 to 110), and high (< 60) anti-methanogenic potential. From evaluated plants, 3, 24, and 12 were classified as high, medium, and low anti-methanogenic potential. High anti-methanogenic potential plants Cnidoscolus phillacanthus (CnPh), Chloroleucon foliolosum (ChFo), and Anadenanthera macrocarpa (AnMa) produced 21.3, 34.3, and 35.9 mL CH₄/L of gas. Methane concentration for Myracrodruon urundeuva (MyUr) was 61.1 mL/L and classified as medium potential. However, CH₄ production per unit of aDOM was similar between MyUr and AnMa (3.35 and 2.68 mL/g, respectively). Molar proportions of acetate and propionate in SCFA produced by ChFo fermentation were 0.02 and 0.78 mmol/mol. Acetate to propionate ratios were 0.79, 0.03, 1.39, and 1.36 for CnPh, ChFo, AnMa, and MyUr, respectively. Greater aOMD were observed for Opuntia sp. and Calotropis procera (632 and 601 g/kg, respectively), which were classified as medium mitigating potential plants. AnMa, ChFo, CnPh, and MyUr are promising anti-methanogenic plants for ruminants. Selecting forages to feed ruminants in Caatinga is a potential strategy for enteric CH₄ emission reduction, and our in vitro results can support future research by indicating species to be evaluated in in vivo studies integrating mixed diets with performance, digestibility, and CH₄ production, yield, and intensity. Graphical abstract ᅟ.

Evaluation of days of total collection and use of internal markers in nutritional trials with small ruminants

Two experiments were conducted to evaluate the number of days required for total fecal collection and the viability of using the indigestible dry matter (iDM), indigestible neutral detergent fiber (iNDF), and indigestible acid detergent fiber (iADF) internal markers to determine the fecal excretion of dry matter (FEDM) and digestibility in nutritional trials with small ruminants. Eight sheep in the first experiment and eight goats in the second experiment were distributed into two 4 × 4 Latin square designs. There were no significant differences between days of total fecal collection for FEDM; digestibility of dry matter (DM), organic matter (OM), crude protein (CP), ether extract (EE), neutral detergent fiber corrected for ash and protein (NDFap), and non-fibrous carbohydrates corrected for ash and protein (NFCap); and total digestible nutrients (TDN) in both species. The results suggest that only 1 day of total collection is sufficient to obtain the FEDM and the digestibility of the nutritional components in sheep and goats. The markers are efficient in determining fecal production and digestibility in these animal species.

Lignin Analysis by HPLC and FTIR

Fourier transform infrared spectroscopy (FTIR) is a simple non-destructive technique which allows the user to obtain quick and accurate information about the structure of the constituents of wood. High performance liquid chromatography (HPLC) is an analytical technique useful to determine the ratio of the lignin monomers obtained by the alkaline nitrobenzene oxidation method. Furthermore, lignin content has been commonly determined by wet chemical methods; Klason lignin determination is a quick and accessible method. Here, we detail the procedures for chemical analysis of the wood lignin using these techniques.

Performance and carcass characteristics of cattle fed lipid sources in the diet

The aim of this study was to determine the effect of the inclusion of different lipid sources [whole cottonseed (CS) and protected fat in diets containing sugarcane, corn, citrus pulp, CS meal, and urea] on animal performance, hot carcass dressing (HCD), ribeye area (RA), fat thickness (FT), and postmortem pH of the meat of Nellore cattle during finishing. The treatments evaluated were feed with 2.50% CS (control diet, T1 treatment); feed with 11.50% CS (high CS, T2 treatment); and feed with 3.13% CS added of protected lipid (PL) (T3 treatment), all on a DM basis. The forage:concentrate ratio of the diet was 50:50. Thirty-nine intact steers with average initial body weight of 494 kg and 36 months old were confined for 63 d. The addition of lipid sources tested in this study did not affect dry matter intake, crude protein intake, neutral detergent fiber intake, final live weight, average daily weight gain, HCD, RA, FT, and meat pH. It was concluded that the addition of PLs in the diet did not affect weight gain and carcass characteristics.

Relationship between thermal behaviour of lignocellulosic components and properties of biomass

Five different biomass samples were selected for this study, including miscanthus, distillers dried grain (DDG), wheat shorts, wheat straw and UK wood. These samples were thermochemically treated to alter the lignin, cellulose and hemicellulose composition. Thermogravimetric tests were carried out on these samples to determine thermal behaviours of biomass and its individual lignocellulosic components. The relationship between thermal behaviour of biomass and its corresponding lignocellulosic composition was revealed. The reliability of this relationship was proved by thermogravimetric analysis of samples of artificial biomass prepared by mixing commercially obtained lignin, cellulose and hemicellulose at various blending ratios. It is shown that actual biomass profiles can be predicted with some degree of accuracy based on the lignocellulosic composition.

Lignin: characterization of a multifaceted crop component

Lignin is a plant component with important implications for various agricultural disciplines. It confers rigidity to cell walls, and is therefore associated with tolerance to abiotic and biotic stresses and the mechanical stability of plants. In animal nutrition, lignin is considered an antinutritive component of forages as it cannot be readily fermented by rumen microbes. In terms of energy yield from biomass, the role of lignin depends on the conversion process. It contains more gross energy than other cell wall components and therefore confers enhanced heat value in thermochemical processes such as direct combustion. Conversely, it negatively affects biological energy conversion processes such as bioethanol or biogas production, as it inhibits microbial fermentation of the cell wall. Lignin from crop residues plays an important role in the soil organic carbon cycling, as it constitutes a recalcitrant carbon pool affecting nutrient mineralization and carbon sequestration. Due to the significance of lignin in several agricultural disciplines, the modification of lignin content and composition by breeding is becoming increasingly important. Both mapping of quantitative trait loci and transgenic approaches have been adopted to modify lignin in crops. However, breeding goals must be defined considering the conflicting role of lignin in different agricultural disciplines.

Effect of diet composition and incubation time on feed indigestible neutral detergent fiber concentration in dairy cows

Indigestible neutral detergent fiber (NDF) predicts forage digestibility accurately and precisely when determined by a 288-h ruminal in situ incubation, and it is an important parameter in mechanistic rumen models. The long incubation time required is a disadvantage. Further, intrinsic cell wall characteristics of feeds should be determined under ideal conditions for fiber digestion. The objective of this study was to determine the effects of diet composition and rumen incubation time on the concentrations of indigestible NDF (iNDF) for a wide range of feeds in dairy cows. Additionally, predicted concentrations of unavailable NDF generated using the National Research Council (NRC) model and the Cornell Net Carbohydrate and Protein System (CNCPS) were evaluated. Indigestible NDF was evaluated in 18 feeds using 4 cows in a split-split plot design. Treatments were in a 3 × 3 factorial arrangement, consisting of different diets and incubation times. Diet composition was primarily varied by changing the level of concentrate supplementation between 190 (low), 421 (medium), and 625 (high)g/kg of diet dry matter (DM). Grass silage was used as the basal forage for all cows. The feeds were incubated for 144, 216, and 288 h. Indigestible NDF was determined from 2-g samples weighed into polyester bags with a pore size of 12 µm and a pore area equal to 6% of the total surface area, giving a sample size to surface ratio of 10mg/cm(2). Across all feeds, the measured iNDF concentrations ranged from 6 to 516 g/kg of DM. The feed iNDF concentration was not affected by the cow used, but diet composition had a significant effect. The mean measured iNDF concentrations for cows consuming low-, medium-, and high-concentrate diets were 178, 186, and 197 g/kg of DM, respectively. The incubation time also affected the feed iNDF concentrations, which averaged 199, 185, and 177 g/kg of DM for 144-, 216-, and 288-h incubations, respectively. We also observed significant interactions between incubation time and feed, and between diet composition and feed, with fiber-rich feeds being most sensitive to these factors. The evaluation of model predictions of unavailable NDF indicated poor precision with prediction errors of 56 (NRC) and 84 (CNCPS)g/kg of DM. Indigestible NDF should be determined based on 288-h ruminal in situ incubations in cows consuming diets with a low proportion of concentrate to represent the feed fraction that is unavailable to the animal.

Comparison of some aspects of the in situ and in vitro methods in evaluation of neutral detergent fiber digestion

The objective of the present study was to compare digestion rates (kd) of NDF for different feeds estimated with the in situ method or derived from an automated gas in vitro system. A meta-analysis was conducted to evaluate how in situ derived kd of NDF related to in vivo digestibility of NDF. Furthermore, in vitro true digestibility of the feed samples incubated within filter bags or dispersed in the medium was compared, and kd for insoluble and soluble components of those feeds were estimated. Four different concentrates and 4 forages were used in this study. Two lactating Swedish Red cows fed a diet of 60% grass silage and 40% concentrate on DM basis were used for in situ incubations and for collection of rumen fluid. The feed samples were ground through a 2.0-mm screen before the in situ incubations and a 1.0-mm screen before the in vitro gas incubations. In situ nylon bags were introduced into the rumen for determination of kd of NDF. Additional kinetic data were produced from isolated NDF and intact samples subjected to in vitro incubations in which gas production was recorded for 72 h. Samples were weighed in the bottles or within filter bags (for fiber and in vitro studies) that were placed in the bottles. The interaction between feed and method was significant (P < 0.01); kd of NDF for grass hay tended (P = 0.06) to be less whereas kd of NDF for alfalfa, barley grain, canola meal, and dried sugar beet pulp were greater (P < 0.01) when estimated with the in situ method than from gas production recordings. The meta-analysis suggested that in situ derived kd of NDF were biased and underestimated in vivo digestibility of NDF. Digestion rates of the intact samples were lower for all feeds, except for the hay, when incubated within the bags compared with dispersed in the medium (P < 0.01). Less OM and NDF were digested for all feeds when incubated within bags than dispersed in the medium (P < 0.01). It is concluded from the in vitro study that microbial activity within the bags is less than in the medium. Significant interactions between method (in situ vs. in vitro) and feed suggest that one or both methods result in biased estimates of digestion kinetics.