Foodomics and infrared spectroscopy: from compounds to functionality

Food authenticity and the interactions with human health and climate change

Food authenticity and fraud, as well as the interest in food traceability have become a topic of increasing interest not only for consumers but also for the research community and the food manufacturing industry. Food authenticity and fraud are becoming prevalent in both the food supply and value chains since ancient times where different issues (e.g., food spoilage during shipment and storage, mixing decay foods with fresh products) has resulted in foods that influence consumers health. The effect of climate change on the quality of food ingredients and products could also have the potential to influence food authenticity. However, this issue has not been considered. This article focused on the interactions between consumer health and the potential effects of climate change on food authenticity and fraud. The role of technology and development of risk management tools to mitigate these issues are also discussed. Where applicable papers that underline the links between the interactions of climate change, human health and food fraud were referenced.

What the fish? Tracing the geographical origin of fish using NIR spectroscopy

Food authentication is a growing concern with rising complexities of the food supply network, with fish being an easy target of food fraud. In this regard, NIR spectroscopy has been used as an efficient tool for food authentication. This article reviews the latest research advances on NIR based fish authentication. The process from sampling/sample preparation to data analysis has been covered. Special attention was given to NIR spectra pre-processing and its unsupervised and supervised analysis. Sampling is an important aspect of traceability study and samples chosen ought to be a true representative of the population. NIR spectra acquired is often laden with overlapping bands, scattering and highly multicollinear. It needs adequate pre-processing to remove all undesirable features. The pre-processing technique can make or break a model and thus need a trial-and-error approach to find the best fit. As for spectral analysis and modelling, multicollinear nature of NIR spectra demands unsupervised analysis (PCA) to compact the features before application of supervised multivariate techniques such as LDA, PLS-DA, QDA etc. Machine learning approach of modelling has shown promising result in food authentication modelling and negates the need for unsupervised analysis before modelling.

Recent trends of machine learning applied to multi-source data of medicinal plants

In traditional medicine and ethnomedicine, medicinal plants have long been recognized as the basis for materials in therapeutic applications worldwide. In particular, the remarkable curative effect of traditional Chinese medicine during corona virus disease 2019 (COVID-19) pandemic has attracted extensive attention globally. Medicinal plants have, therefore, become increasingly popular among the public. However, with increasing demand for and profit with medicinal plants, commercial fraudulent events such as adulteration or counterfeits sometimes occur, which poses a serious threat to the clinical outcomes and interests of consumers. With rapid advances in artificial intelligence, machine learning can be used to mine information on various medicinal plants to establish an ideal resource database. We herein present a review that mainly introduces common machine learning algorithms and discusses their application in multi-source data analysis of medicinal plants. The combination of machine learning algorithms and multi-source data analysis facilitates a comprehensive analysis and aids in the effective evaluation of the quality of medicinal plants. The findings of this review provide new possibilities for promoting the development and utilization of medicinal plants.

Towards the non-invasive assessment of staling in bovine hides with hyperspectral imaging

Microbial spoilage or staling of bovine hides during storage leads to poor leather quality and increased chemical consumption during processing. Conventional microbiological examinations of hide samples which require time-consuming microbe culture cannot be employed as a practical staling detection approach for leather production. Hyperspectral imaging (HSI), featuring fast data acquisition and implementation flexibility has been considered ideal for in-line detection of microbial contamination in Agri- food products. In this study, a linescan hyperspectral imaging system working in a spectral range of 550 nm to 1700 nm was utilized as a rapid and non-destructive technique for predicting the aerobic plate counts (APC) on raw hide samples during storage. Fresh bovine hide samples were stored at 4 °C and 20 °C for 3 days. Every day, hyperspectral images were acquired on both sides for each sample. The APCs were determined simultaneously by conventional microbiological plating method. Leather quality was evaluated by microscopic inspection of grain surfaces, which indicate the acceptable threshold of microbe load on hide samples for leather processing. Partial least squares regression (PLSR) was applied to fit the spectral information extracted from the samples to the logarithmic values of APC to develop microbe load prediction models. All models showed good prediction accuracy, yielding a R_cv² in the range of 0.74-0.92 and standard error of cross validation (SECV) in the range of 0.61-0.76 %. The prediction capability of the HSI was explored using the model developed with SNV + smoothened pre-processing to spatially predict plate count in the samples. Models established in this study successfully predicted the staling states characterised by bacterial loads on hide samples with low prediction errors. Models, visually, showed the differences in microbial load across the storage time and temperatures. Results illustrate that HSI can be potentially implemented as a non-invasive tool to predict microbe loads in bovine hides before leather processing, so that real-time grading of hides based on staling states can be achieved. This will reduce the cost of leather production and waste management and pave the way for allocating material supply for different production purposes.

Spectroscopy and imaging technologies coupled with machine learning for the assessment of the microbiological spoilage associated to ready-to-eat leafy vegetables

Based on both new and previously utilized experimental data, the present study provides a comparative assessment of sensors and machine learning approaches for evaluating the microbiological spoilage of ready-to-eat leafy vegetables (baby spinach and rocket). Fourier-transform infrared (FTIR), near-infrared (NIR), visible (VIS) spectroscopy and multispectral imaging (MSI) were used. Two data partitioning approaches and two algorithms, namely partial least squares regression and support vector regression (SVR), were evaluated. Concerning baby spinach, when model testing was performed on samples randomly selected, the performance was better than or similar to the one attained when testing was performed based on dynamic temperatures data, depending on the applied analytical technology. The two applied algorithms yielded similar model performances for the majority of baby spinach cases. Regarding rocket, the random data partitioning approach performed considerably better results in almost all cases of sensor/algorithm combination. Furthermore, SVR algorithm resulted in considerably or slightly better model performances for the FTIR, VIS and NIR sensors, depending on the data partitioning approach. However, PLSR algorithm provided better models for the MSI sensor. Overall, the microbiological spoilage of baby spinach was better assessed by models derived mainly from the VIS sensor, while FTIR and MSI were more suitable in rocket. According to the findings of this study, a distinct sensor and computational analysis application is needed for each vegetable type, suggesting that there is not a single combination of analytical approach/algorithm that could be applied successfully in all food products and throughout the food supply chain.

Food Metabolites as Tools for Authentication, Processing, and Nutritive Value Assessment

Secondary metabolites are molecules with unlimited applications that have been gaining importance in various industries and studied from many angles. They are mainly used for their bioactive capabilities, but due to the improvement of sensibility in analytical chemistry, they are also used for authentication and as a quality control parameter for foods, further allowing to help avoid food adulteration and food fraud, as well as helping understand the nutritional value of foods. This manuscript covers the examples of secondary metabolites that have been used as qualitative and authentication molecules in foods, from production, through processing and along their shelf-life. Furthermore, perspectives of analytical chemistry and their contribution to metabolite detection and general perspectives of metabolomics are also discussed.

From consumers' science to food functionality-Challenges and opportunities for vibrational spectroscopy

Current available methods used to measure or estimate the composition, functionality, and sensory properties of foods and food ingredients are destructive and time consuming. Therefore, new approaches are required by both the food industry and R&D organizations. Recent years have witnessed a steady growth on the applications and utilization of vibrational spectroscopy techniques [near (NIR), mid infrared (MIR), Raman] to analyse or estimate several properties in a wide range of foods and food ingredients. This chapter will provide with an overview of vibrational spectroscopy techniques, the combination of these techniques with multivariate data analysis, and examples on the use of these techniques to measure composition, and functional properties in a wide range of foods.

Near-infrared spectroscopy applications for high-throughput phenotyping for cassava and yam: A review

The review aimed to identify the different high‐throughput phenotyping (HTP) techniques that used for quality evaluation in cassava and yam breeding programmes, and this has provided insights towards the development of metrics and their application in cassava and yam improvements. A systematic review of the published research articles involved the use of NIRS in analysing the quality traits of cassava and yam was carried out, and Scopus, Science Direct, Web of Sciences and Google Scholar were searched. The results of the review established that NIRS could be used in understanding the chemical constituents (carbohydrate, protein, vitamins, minerals, carotenoids, moisture, starch, etc.) for high‐throughput phenotyping. This study provides preliminary evidence of the application of NIRS as an efficient and affordable procedure for HTP. However, the feasibility of using mid‐infrared spectroscopy (MIRS) and hyperspectral imaging (HSI) in combination with the NIRS could be further studied for quality traits phenotyping.

Effects of caprolactam content on curdlan-based food packaging film and detection by infrared spectroscopy

In this study, we report a rapid statistical approach used in determining the caprolactam (CPL) content in curdlan packaging films, which is based on the spectral data observed in the near-infrared (NIR) and Mid-infrared (MIR) regions. At the first stage of the study, the CPL content was added into the curdlan films prepared by controlling the concentration, and then the effect of the CPL concentration on the measured mechanical properties of the produced films were evaluated. At the next stage, the NIR and MIR spectra of the curdlan films with different CPL concentrations were recorded by using the FT-NIR and FT-IR spectroscopy technique, and the spectral data to be used in the regression models in our quantitative analyses were carefully selected. It was observed that the curdlan film with 5% CPL exhibited the best mechanical properties. The obtained best correlation parameters which are used in evaluation of CPL content through the observed NIR and MIR spectral data are Rp = 0.9552, RMSEP = 1.2506 (NIR); Rp = 0.9092 and RMSEP = 1.9136 (MIR), respectively. These optimal values support the expectation that our statistical approach based on NIR and MIR data can provide a rapid, accurate and nondestructive way of determining CPL content in curdlan packaging films.

Challenges and opportunities of the fourth revolution: a brief insight into the future of food

By 2050, the global population is projected to be in excess of nine billion people. This will result in an increased burden and stress on the food production systems, particularly in adjustments to several stages of the value chain that will require improvements and/or modifications in their effectiveness such as reducing waste, adapting to climate change, food security, and health. Disruptions such as digital agriculture, digital food, food agility, big data, have been utilized to characterize the changes in the way agro-food systems evolve and function, as well as in the approach they have been analyzed, measured, and monitored. It has been long recognized that the food industry is considered as a data driven enterprise. These characteristics are very important as the food industry becomes global and sustainable. The food industry is currently undergoing significant changes, and with this, challenges are occurring. These challenges are brought about from the food chains, climate changes, and the ability to be resilient in the production of food. Furthermore, health and cultural changes to food are occurring, where the diseases of obesity, diabetes, and aging in the population will continue to change the consumer's patterns and choices; whereby the consumer will be persuaded to choose and eat healthy and more nutritious foods. Indeed, the cultural awareness and social innovation to prevent food waste and therefore improve food security and sustainability will also prove to further complexities. This short review will briefly discuss some of the forefront issues in food value chains with a focus on using technology.

Feasibility of rapid piperine quantification in whole and black pepper using near infrared spectroscopy and chemometrics

Piperine is a bioactive alkaloid that possesses various health benefits and is responsible for the pungent aroma of pepper. Piperine content in whole and ground black pepper (n = 132) was analyzed by near-infrared spectroscopy (NIRS) in the 950 to 1650 nm wavelength window. Chemometric modeling using partial least square regression was performed, and outliers were checked and removed during the preparation of the calibration curve by considering sample residual variance and sample leverage. Model accuracy was evaluated with a low root-mean-square error of cross-validation (RMSECV) and a high ratio performance to deviation (RPD). The optimal model had a coefficient of determination (R² ) of 0.726, RMSECV of 0.289 g/100 g, and RPD of 1.744 for the whole black pepper. The results of R² , RMSECV, and RPD for the ground black pepper were 0.850, 0.231 g/100 g, and 2.424, respectively. Therefore, based on the perspective of onsite process, the proposed NIRS method can be employed for selecting abnormal samples during the inspection of black pepper raw material and for quantifying piperine contents of final black pepper product. PRACTICAL APPLICATION: Generally, the quality indicators of black pepper are graded solely based on their external appearance, quality, and size. This study discloses the development of a near-infrared spectroscopy-based fast and accurate nondestructive analytical method for the detection of piperine, a bioactive constituent of pepper, as a tool for the quality control of whole and ground black pepper.

How Fishy Is Your Fish? Authentication, Provenance and Traceability in Fish and Seafood by Means of Vibrational Spectroscopy

Food authenticity, traceability and provenance are emerging issues of major concern for consumers, industries and regulatory bodies worldwide. In addition, both food safety and security are an intrinsic component of food quality where the above issues are key in modern traceability and management systems. It has been reported that substitution of a high-quality species by less expensive ones might be a frequent practice in seafood products such as fish and shellfish. In this type of products, the source (e.g., origin) and identification of the species are complex. Although different countries have implemented strict regulations and labelling protocols, these issues still are of concern. This article briefly reviews some of the most recent applications of vibrational spectroscopy (near and mid infrared, Raman) combined with chemometrics to target some of these issues in the seafood and fish industries.

From Academia to Reality Check: A Theoretical Framework on the Use of Chemometric in Food Sciences

There is no doubt that the current knowledge in chemistry, biochemistry, biology, and mathematics have led to advances in our understanding about food and food systems. However, the so-called reductionist approach has dominated food research, hindering new developments and innovation in the field. In the last three decades, food science has moved into the digital and technological era, inducing several challenges resulting from the use of modern instrumental techniques, computing and algorithms incorporated to the exploration, mining, and description of data derived from this complexity. In this environment, food scientists need to be mindful of the issues (advantages and disadvantages) involved in the routine applications of chemometrics. The objective of this opinion paper is to give an overview of the key issues associated with the implementation of chemometrics in food research and development. Please note that specifics about the different methodologies and techniques are beyond the scope of this review.

Use of Foodomics for Control of Food Processing and Assessing of Food Safety

Food chain, food safety, and food-processing sectors face new challenges due to globalization of food chain and changes in the modern consumer preferences. In addition, gradually increasing microbial resistance, changes in climate, and human errors in food handling remain a pending barrier for the efficient global food safety management. Consequently, a need for development, validation, and implementation of rapid, sensitive, and accurate methods for assessment of food safety often termed as foodomics methods is required. Even though, the growing role of these high-throughput foodomic methods based on genomic, transcriptomic, proteomic, and metabolomic techniques has yet to be completely acknowledged by the regulatory agencies and bodies. The sensitivity and accuracy of these methods are superior to previously used standard analytical procedures and new methods are suitable to address a number of novel requirements posed by the food production sector and global food market.