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Hanumesh, Amshumali MK, Prachi P, Yogendra K, Madhusudhana N, Vinay Kumar B. Investigation of bisindole-linked pyrimidine moieties: synthesis using strantium-aluminum supported strontium aluminate nanophosphors catalyst, DNA reactivity, and in silico molecular docking studies. NUCLEOSIDES, NUCLEOTIDES & NUCLEIC ACIDS 2024:1-18. [PMID: 38817089 DOI: 10.1080/15257770.2024.2358901] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/20/2024] [Accepted: 05/19/2024] [Indexed: 06/01/2024]
Abstract
In this communication, an innovative and straightforward protocol for the one-pot catalytic synthesis of bis(indolyl)pyrimidine derivatives and their DNA binding abilities is presented. The synthesis involves the condensation of indole with diverse substituted pyrimidine-5-carbaldehydes, employing cost-effective and reusable Sr-Al supported nanophosphors, specifically strontium aluminate (SrAl2O4), as a catalyst. In particular, this method does not require the use of toxic solvents. The Sr-Al supported nanophosphorus catalyst exhibited sustained activity over multiple cycles and showed no significant decline while maintaining its strictly heterogeneous properties. The bis(indolyl)pyrimidine derivatives were extensively characterized using spectroscopic and analytical techniques. Furthermore, the interaction between these derivatives and CT-DNA was investigated by absorption spectroscopy, viscosity measurement, and in silico molecular docking studies. Photoinduced cleavage studies demonstrated the photonuclease activity of the compound against pUC19 DNA upon exposure to UV-visible radiation.
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Affiliation(s)
- Hanumesh
- Department of PG Studies and Research in Industrial Chemistry, Vijayanagara Sri Krishnadevaraya University, Bellary, 583105, India
| | - M K Amshumali
- Department of PG Studies and Research in Industrial Chemistry, Vijayanagara Sri Krishnadevaraya University, Bellary, 583105, India
| | - P Prachi
- Department of Biotechnology, Allied Health Science BLDE (Deemed to be University), Vijayapura, India
| | - K Yogendra
- Department of PG Studies and Research in Environmental Science, Kuvempu University, Shimoga, India
| | - N Madhusudhana
- Department of PG Studies and Research in Environmental Science, Kuvempu University, Shimoga, India
| | - B Vinay Kumar
- Department of Chemistry, BGS College of Engineering & Technology, Bengaluru, India
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Tapala KC, Ndlangamandla NG, Ngoepe MP, Clayton HS. Molecular Structure, Spectroscopic, Frontier Molecular Orbital Analysis, Molecular Docking Studies, and In Vitro DNA-Binding Studies of Osmium(II)-Cymene Complexes with Aryl Phosphine and Aryl Phosphonium Assemblies. Bioinorg Chem Appl 2024; 2024:6697523. [PMID: 38840845 PMCID: PMC11152764 DOI: 10.1155/2024/6697523] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/10/2023] [Revised: 10/25/2023] [Accepted: 04/23/2024] [Indexed: 06/07/2024] Open
Abstract
X-ray crystallography, spectroscopy, computational methods, molecular docking studies, and in vitro DNA-binding studies have been useful in the investigations of intermolecular and intramolecular interactions of osmium-cymene oxalato complexes with aryl phosphine and aryl phosphonium groups in both primary and secondary coordination spheres, respectively. Molecular structures of the novel complexes PPh4[Os(η6-p-cymene)Br(κ2-O,O'-C2O4)] (1) and [Os(η6-p-cymene) (κ2-O,O'-C2O4)PPh3] (2) were resolved by single-crystal X-ray diffraction (XRD). Primary and secondary coordination sphere contacts were investigated using Hirshfeld surface analysis which was supported by molecular docking (MD) studies. The MD data obtained predicted significant differences in binding energy across three receptors for the two osmium complexes. An in vitro DNA-binding study was accomplished using UV-Vis spectroscopy which showed that both 1 and 2 bond with DNA through an intercalation approach. The optimized molecular geometry, frontier molecular orbital (EHOMO and ELUMO) energies, global electrophilicity index (ω), chemical hardness (η), chemical potential (µ), and the energy band gap (EHOMO-ELUMO) were calculated utilizing density functional theory (DFT) methods. Computed structural parameters (bond lengths and angles) support the experimental single-crystal XRD data.
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Affiliation(s)
- Kgaugelo C. Tapala
- Chemistry Department, University of South Africa, Unisa Science Campus, Johannesburg 1709, South Africa
| | - Nqobile G. Ndlangamandla
- Chemistry Department, University of South Africa, Unisa Science Campus, Johannesburg 1709, South Africa
| | - Mpho P. Ngoepe
- Chemistry Department, University of South Africa, Unisa Science Campus, Johannesburg 1709, South Africa
| | - Hadley S. Clayton
- Chemistry Department, University of South Africa, Unisa Science Campus, Johannesburg 1709, South Africa
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Li P, Wang Y, Wang X, Li R, Wang K, Jiang Y, Zhang M, Huang C, Ma Q, Sun J, Quan J. Preparation of a Novel Oat β-Glucan-Chromium(III) Complex and Its Hypoglycemic Effect and Mechanism. Molecules 2024; 29:1998. [PMID: 38731488 PMCID: PMC11085915 DOI: 10.3390/molecules29091998] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/20/2024] [Revised: 04/14/2024] [Accepted: 04/20/2024] [Indexed: 05/13/2024] Open
Abstract
This study synthesized a novel oat β-glucan (OBG)-Cr(III) complex (OBG-Cr(III)) and explored its structure, inhibitory effects on α-amylase and α-glucosidase, and hypoglycemic activities and mechanism in vitro using an insulin-resistant HepG2 (IR-HepG2) cell model. The Cr(III) content in the complex was found to be 10.87%. The molecular weight of OBG-Cr(III) was determined to be 7.736 × 104 Da with chromium ions binding to the hydroxyl groups of OBG. This binding resulted in the increased asymmetry and altered spatial conformation of the complex along with significant changes in morphology and crystallinity. Our findings demonstrated that OBG-Cr(III) exhibited inhibitory effects on α-amylase and α-glucosidase. Furthermore, OBG-Cr(III) enhanced the insulin sensitivity of IR-HepG2 cells, promoting glucose uptake and metabolism more efficiently than OBG alone. The underlying mechanism of its hypoglycemic effect involved the modulation of the c-Cbl/PI3K/AKT/GLUT4 signaling pathway, as revealed by Western blot analysis. This research not only broadened the applications of OBG but also positioned OBG-Cr(III) as a promising Cr(III) supplement with enhanced hypoglycemic benefits.
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Affiliation(s)
- Pengshou Li
- College of Food and Drug, Luoyang Normal University, Luoyang 471934, China; (P.L.); (Y.W.); (X.W.); (R.L.); (K.W.); (Y.J.); (M.Z.); (C.H.)
| | - Yunlu Wang
- College of Food and Drug, Luoyang Normal University, Luoyang 471934, China; (P.L.); (Y.W.); (X.W.); (R.L.); (K.W.); (Y.J.); (M.Z.); (C.H.)
| | - Xiaoting Wang
- College of Food and Drug, Luoyang Normal University, Luoyang 471934, China; (P.L.); (Y.W.); (X.W.); (R.L.); (K.W.); (Y.J.); (M.Z.); (C.H.)
| | - Rui Li
- College of Food and Drug, Luoyang Normal University, Luoyang 471934, China; (P.L.); (Y.W.); (X.W.); (R.L.); (K.W.); (Y.J.); (M.Z.); (C.H.)
| | - Kaihui Wang
- College of Food and Drug, Luoyang Normal University, Luoyang 471934, China; (P.L.); (Y.W.); (X.W.); (R.L.); (K.W.); (Y.J.); (M.Z.); (C.H.)
| | - Yu Jiang
- College of Food and Drug, Luoyang Normal University, Luoyang 471934, China; (P.L.); (Y.W.); (X.W.); (R.L.); (K.W.); (Y.J.); (M.Z.); (C.H.)
| | - Mingyuan Zhang
- College of Food and Drug, Luoyang Normal University, Luoyang 471934, China; (P.L.); (Y.W.); (X.W.); (R.L.); (K.W.); (Y.J.); (M.Z.); (C.H.)
| | - Chuhan Huang
- College of Food and Drug, Luoyang Normal University, Luoyang 471934, China; (P.L.); (Y.W.); (X.W.); (R.L.); (K.W.); (Y.J.); (M.Z.); (C.H.)
| | - Qixiang Ma
- Cancer Institute, Fudan University Cancer Hospital and Cancer Metabolism Laboratory, Institutes of Biomedical Sciences, Fudan University, Shanghai 200032, China;
| | - Jian Sun
- Experimental Research Center, China Academy of Chinese Medical Sciences, Beijing 100700, China
| | - Jianye Quan
- Experimental Research Center, China Academy of Chinese Medical Sciences, Beijing 100700, China
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Lotha TN, Richa K, Sorhie V, Ketiyala, Nakro V, Imkongyanger, Ritse V, Rudithongru L, Namsa ND, Jamir L. Environmentally benign synthesis of unsymmetrical ureas and their evaluation as potential HIV-1 protease inhibitors via a computational approach. Mol Divers 2024; 28:749-763. [PMID: 36788191 DOI: 10.1007/s11030-023-10615-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/05/2022] [Accepted: 01/30/2023] [Indexed: 02/16/2023]
Abstract
The present work reports the cost-effective, high yielding and environmentally acceptable preparation of unsymmetrical ureas from thiocarbamate salts using sodium percarbonate as an oxidant. Efficacy of the unsymmetrical ureas as potential human immune deficiency virus (HIV-1) protease inhibitors has been evaluated via in silico approach. The results revealed interactions of the urea compounds at the active site of the enzyme with favorable binding affinities causing possible mutations hindering the functioning of the enzyme. Further computational assessment of IC50 using known references satisfactorily authenticated the inhibitory action of the selected compounds against HIV-1 protease. Added to the easy synthesis of the ureas following an environmentally benign protocol, this work may be a valuable addition to the ongoing search for drugs with better efficacy profiles and reduced toxicity against HIV.
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Affiliation(s)
- Tsenbeni N Lotha
- Department of Environmental Science, Nagaland University, Lumami, Nagaland, 798627, India
| | - Kikoleho Richa
- Department of Chemistry, Nagaland University, Lumami, Nagaland, 798627, India
| | - Viphrezolie Sorhie
- Department of Environmental Science, Nagaland University, Lumami, Nagaland, 798627, India
| | - Ketiyala
- Department of Environmental Science, Nagaland University, Lumami, Nagaland, 798627, India
| | - Vevosa Nakro
- Department of Environmental Science, Nagaland University, Lumami, Nagaland, 798627, India
| | - Imkongyanger
- Department of Environmental Science, Nagaland University, Lumami, Nagaland, 798627, India
| | - Vimha Ritse
- Department of Environmental Science, Nagaland University, Lumami, Nagaland, 798627, India
| | - Lemzila Rudithongru
- Department of Environmental Science, Nagaland University, Lumami, Nagaland, 798627, India
| | - Nima D Namsa
- Department of Molecular Biology and Biotechnology, Tezpur University, Napaam, Assam, 784028, India
| | - Latonglila Jamir
- Department of Environmental Science, Nagaland University, Lumami, Nagaland, 798627, India.
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maheswari CU. Molecular structure, vibrational spectral, electron density analysis on linaloe oil and molecular docking efficacy against the therapeutic target on human immunodeficiency virus-1 organism (VIRAL protein). Heliyon 2024; 10:e26274. [PMID: 38384556 PMCID: PMC10879012 DOI: 10.1016/j.heliyon.2024.e26274] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/04/2024] [Accepted: 02/09/2024] [Indexed: 02/23/2024] Open
Abstract
Natural traditional medicine extensively uses certain terpenes and gives plants their flavor, aroma, and color. Treatments for bacterial infections, malaria, and cardiovascular disorders, anti-inflammatory, promote circulation, and heal wounds. 3,7-Dimethyl-1,6-octadien-3-ol (Linalool) is a naturally occurring monoterpene alcohol with no cycle and is a colorless liquid. Spectral analysis such as UV absorption spectra, NMR for structure determination, and IR and Raman for vibrational analysis. The Quantum mechanical approach uses DFT, ELF, and LOL-promolecular electron density, non-relaxed, and atomic density analysis. The biomolecular studies such as molecular dynamics using protein-ligand complex with HIV-1 organism (energy minimization). ADMET for the usage of linalool in different metabolism studies and Molecular docking for binding affinity, its reactive site estimation, and macromolecules that come into contact with protein receptors and conclude ligand binding affinity with protein.
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Affiliation(s)
- Chandramohan Uma maheswari
- Department of Physics, Vel Tech High Tech Dr. Rangarajan Dr. Sakunthala Engineering College, Avadi, Chennai, 600062, Tamilnadu, India
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Bashal AH, Khalil KD, Abu-Dief AM, El-Atawy MA. Cobalt oxide-chitosan based nanocomposites: Synthesis, characterization and their potential pharmaceutical applications. Int J Biol Macromol 2023; 253:126856. [PMID: 37714231 DOI: 10.1016/j.ijbiomac.2023.126856] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/01/2023] [Revised: 08/03/2023] [Accepted: 09/09/2023] [Indexed: 09/17/2023]
Abstract
This research aimed to prepare, characterize, and investigate the biological efficacy of chitosan‑cobalt (II) oxide hybrid nanocomposites against a variety of micrograms. Analytical methods, FTIR, SEM, XRD, and EDX, were utilized to thoroughly characterize the produced CS-CoO nanocomposite. In FTIR spectra, the presence of the chitosan peaks in addition to that of CoO at 681 and 558 cm-1 confirmed that CoO molecules interact with the chitosan backbone. Moreover, in the XRD measurements, significantly less chitosan crystallinity was observed. Due to the incorporation of a larger amount of cobalt oxide within the polymer matrix. Applying the Debye-Sherrer calculation, the crystallite size was obviously reduced from 48.24 nm (5 wt %) to 19.27 nm (20 wt %) for the obtained nanocomposites. Furthermore, SEM measurements showed a transformation in the chitosan surface with the physical adsorption of CoO molecules on the surface active sites of chitosan that were visible in SEM graphs. Additionally, EDX determined the amount of Co element within the chitosan, with the sample of 20 wt % weight being found to be 19.26 wt %. The variable dose well-diffusion method was utilized to assess the efficacy of the CS-Co nanocomposite against a wide range of bacteria and fungi. CS - CoO nanocomposite is more effective than chitosan alone as an antibacterial agent against both Gram-positive and Gram-negative bacteria. Moreover, the MTT approach was employed to measure the cytotoxicity based on the cell viability of different cancer cell lines under different UV expositions. The proportion of the destroyed cells elevated due to the easy diffusion of CS - CoO nanocomposite into cancer cells as UV-free anticancer activity. UV exposition has stimulated the anticancer activity, which was attributed to an increase in ROS generation caused by the increased dose of the chitosan and its CS - CoO nanocomposites. Furthermore, the antioxidant capacities of the prepared nano-composites thin films were validated using the DPPH free radical scavenging method and showed good antioxidant activities with the DPPH radical compared with standard vitamin C. It has been noticed that by increasing the content of CoO nanoparticles from 5 to 20 wt %, the biological activity of the prepared nanocomposites was enhanced.
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Affiliation(s)
- Ali H Bashal
- Department of Chemistry, Faculty of Science, Taibah University, Al-Madinah Almunawarah, Yanbu El-Bahr 46423, Saudi Arabia.
| | - Khaled D Khalil
- Department of Chemistry, Faculty of Science, Taibah University, Al-Madinah Almunawarah, Yanbu El-Bahr 46423, Saudi Arabia; Department of Chemistry, Faculty of Science, Cairo University, Giza 12613, Egypt.
| | - Ahmed M Abu-Dief
- Department of Chemistry, Faculty of Science, Taibah University, Al-Madinah Almunawarah 30002, Saudi Arabia; Department of Chemistry, Faculty of Science, Sohag University, Sohag 82534, Egypt.
| | - Mohamed A El-Atawy
- Department of Chemistry, Faculty of Science, Taibah University, Al-Madinah Almunawarah, Yanbu El-Bahr 46423, Saudi Arabia; Chemistry Department, Faculty of Science, Alexandria University, P.O. 426 Ibrahemia, Alexandria 21321, Egypt.
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Alamier WM, Alaghaz ANMA. Design, spectral characterization, quantum chemical investigation, biological activity of nano-sized transition metal complexes of tridentate 3-mercapto-4H-1,2,4-triazol-4-yl-aminomethylphenol Schiff base ligand. J Biomol Struct Dyn 2023:1-21. [PMID: 38133937 DOI: 10.1080/07391102.2023.2294171] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/25/2023] [Accepted: 11/23/2023] [Indexed: 12/24/2023]
Abstract
A tridentate Schiff base ligand, H2MTIP, was produced by condensing salicylaldehyde with 4-amino-4H-1,2,4-triazole-3-thiol. The ligand was then used to create nanosized complexes of Pt(II), Ni(II), Cu(II), and Pd(II). The complexes have the composition [Pt/Ni/Cu/or Pd(MTIP)(H2O)], this conclusion is supported by molar conductance, magnetic moments, elemental analyses, spectral analyses. In DFT analysis, the 6-31+ g(d,p) basis set was used to fully optimize the energy with respect to the shapes of Schiff base ligand and metal complexes. Pt(II), Ni(II), Cu(II), and Pd(II) complexes have been assigned square-planar geometries. At the same time, the intense diffraction peaks in X-ray diffractograms show their crystalline features with particle sizes in the nanoscale range. The binding interaction of calf thymus DNA with these metal complexes and their insulin-like activity was examined in vitro by inhibiting α-amylase. The study investigated the in-vitro activity of several complexes and identified Pt(II) complex as the one with the highest activity. The researchers then tested this complex for in-vivo antidiabetic activity in induced diabetic rats using the STZ model, and it significantly lowered blood glucose levels. The antioxidant activity and toxicity level of Pt(II) complex were also excellent, suggesting that it could be a good candidate for further research as a possible diabetes drug.Communicated by Ramaswamy H. Sarma.
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Affiliation(s)
- Waleed M Alamier
- Department of Chemistry, College of Science, Jazan University, Jazan, Kingdom of Saudi Arabia
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Karipcin F, Öztoprak UT, Dede B, Şahin S, Özmen İ. Synthesis and DFT calculations of metal(II) oxime complexes bearing cysteine as coligand and investigation of their biological evolutions in vitro and in silico. J Biomol Struct Dyn 2023:1-20. [PMID: 37968962 DOI: 10.1080/07391102.2023.2281638] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/05/2023] [Accepted: 11/04/2023] [Indexed: 11/17/2023]
Abstract
New complexes with the formula of [ML(Cys)(H2O)2] were obtained as a result of the reaction between the oxime ligand [HL: 4-(4-bromophenylaminoisonitrosoacetyl)biphenyl], cysteine (Cys), and the metal(II) salts (Mn, Ni, Co, Zn, Cu). The newly synthesized compounds were characterized using conventional techniques such as molar conductance, magnetic measurements, elemental analysis, infrared spectroscopy, and thermal analysis (TGA/DTA). Based on the conductivity measurements in DMF, it was determined that the complexes were non-electrolytes. The TGA/DTA analysis was performed to examine the thermal stability and degradation behavior of all samples, and results demonstrated that metal oxides or sulfides formed as a result of the decompositions. In conjunction with other data obtained, the elemental analysis confirmed the octahedral coordination of the complexes with deprotonated oxime (O, O-donor) and amino acid (N, S-donor) ligands and two coordinated waters. The compounds' optimized geometries, molecular electrostatic potential diagrams, and frontier molecular orbitals were computed at the DFT/B3LYP level using the 6-311 G(d,p) and LANL2DZ basis sets. The antibacterial and DNA cleavage activities of all synthesized compounds were also screened, and molecular docking simulations were performed. According to the results of molecular docking studies conducted with three different proteins, the best interaction was found to be between HL-1HNJ with a binding energy of -9.5 kcal/mol. The stability of the HL-1HNJ complex was also verified by a molecular dynamics simulation performed for 50 ns.Communicated by Ramaswamy H. Sarma.
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Affiliation(s)
- Fatma Karipcin
- Department of Chemistry, Nevşehir Hacı Bektaş Veli University, Nevşehir, Turkey
| | | | - Bülent Dede
- Department of Chemistry, Süleyman Demirel University, Isparta, Turkey
| | - Selmihan Şahin
- Department of Chemistry, Süleyman Demirel University, Isparta, Turkey
| | - İsmail Özmen
- Department of Chemistry, Süleyman Demirel University, Isparta, Turkey
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Baklouti L, Mellah B, Koko WS. Complexing Properties of Synthesized 1,3,5-Triaza-7-Phosphaadamantane Derivatives Towards Some Lanthanides and Transition Metal Cations With Significant Antimicrobial and Antioxidant Activities. Dose Response 2023; 21:15593258231216274. [PMID: 38022901 PMCID: PMC10655660 DOI: 10.1177/15593258231216274] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/27/2022] [Accepted: 10/31/2023] [Indexed: 12/01/2023] Open
Abstract
The synthesis of new water-soluble N-alkylated derivatives of 1,3,5-triaza-7-phosphaadamantane is presented. Ru(PPh3)2Cl2 has been used to react with 1-(4-nitrobenzyl)-3,5-triaza-1-azonia-7-phosphaadamantane bromide (PTAR). By using elemental analysis, NMR, and IR spectroscopy, the obtained compounds were identified. The UV-visible absorption spectroscopy has been used to monitor the complexation of various transition metal cations. Studies on conductivity have been utilized to validate the complexes' stoichiometries. Using the disc diffusion method, five bacteria strains were used for the study of the antimicrobial activity of compounds 1-3. All tested pathogens, including M luteus LB 141107, were found to have strong biologic activity against the compounds tested in this study. Additionally, DPPH (2,2-diphenyl-1-picrylhydrazyl) has been tested for its ability to scavenge hydrogen peroxide and free radicals. According to our results, these compounds exhibit excellent radical scavenging properties.
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Affiliation(s)
- Lassaad Baklouti
- Laboratory of Applied Chemistry and Natural Substances Resources and Environment, Faculty of Sciences, University of Carthage, Bizerta, 7021, Tunisia
| | - Besma Mellah
- National Center of Researches in Material Sciences (CNRSM), Soliman, 2050, Tunisia
| | - Waleed S. Koko
- Department of Science Laboratories, College of Science and Arts, Qassim University, Ar Rass, Saudi Arabia, 51921
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Sankarganesh M, Jose PA, Raja JD, Revathi N, Sakthivel A, Rajesh J, Gurusamy S, Solomon RV. Spectroscopic and theoretical approach of DNA interaction and anticancer studies of bio-pharmaceutically active pyrimidine derived Cu(II) and Zn(II) complexes. Int J Biol Macromol 2023; 249:126095. [PMID: 37536408 DOI: 10.1016/j.ijbiomac.2023.126095] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/27/2023] [Revised: 07/21/2023] [Accepted: 07/26/2023] [Indexed: 08/05/2023]
Abstract
New metal(II) complexes (CuL2 and ZnL2) with pyrimidine appended Schiff base ligand (HL) were synthesized and characterized by diverse spectroscopic methods, reveals the proposed structure of metal(II) complexes possess square planar geometry. DNA interaction ability of isolated compounds was studied by UV-Visible, fluorescence, viscometric and electrochemical methods and the results showed that isolated compounds intercalated with calf thymus DNA (CT-DNA). In addition, anticancer activities of HL, CuL2, and ZnL2 have been evaluated by MTT assay, signifying moderate cytotoxic activity on selected cancer cell lines and less toxicity on NHDF normal cell line due to the specific targeting of pyrimidine analogues. Moreover, antioxidant activities of isolated compounds towards diverse free radicals have been studied by spectrophotometric methods. These results showed that CuL2 has better antioxidant ability than HL and ZnL2. Finally, antimicrobial activities of isolated compounds against selected antimicrobial pathogens exposed that CuL2 has better antimicrobial activity on E. coli and C. albicans than other antimicrobial pathogens. The DFT calculations have been done to get the optimized geometry of the ligand and the metal complexes. In order to get a broad understanding of the interactions of these synthesized metal complexes, a detailed molecular docking analysis is taken up.
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Affiliation(s)
- Murugesan Sankarganesh
- Department of Chemistry, Saveetha School of Engineering, Saveetha Institute of Medical and Technical Sciences (SIMATS), Saveetha University, Chennai, Tamil Nadu 602 105, India
| | - Paulraj Adwin Jose
- Department of Chemistry, E.G.S. Pillay Engineering College, Nagapattinum, Tamil Nadu 611 002, India
| | - Jeyaraj Dhaveethu Raja
- PG & Research Department of Chemistry, The American College, Tallakkulam, Madurai, Tamil Nadu 625 002, India.
| | - Nagaraj Revathi
- Department of Chemistry, Ramco Institute of Technology, Rajapalayam, Virudhunagar 626117, Tamil Nadu, India
| | - Arumugam Sakthivel
- Department of Chemistry, Mepco Schlenk Engineering College, Sivakasi 626005, Tamil Nadu, India
| | - Jegathalaprathaban Rajesh
- Department of Chemistry, Saveetha School of Engineering, Saveetha Institute of Medical and Technical Sciences (SIMATS), Saveetha University, Chennai, Tamil Nadu 602 105, India
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Pandya SB, Socha BN, Dubey RP, Patel UH, Patel RH, Bhatt BS, Thakor P, Bhakhar S, Vekariya N, Valand J. Visible light-driven photocatalysts, quantum chemical calculations, ADMET-SAR parameters, and DNA binding studies of nickel complex of sulfadiazine. Sci Rep 2023; 13:15275. [PMID: 37714951 PMCID: PMC10504334 DOI: 10.1038/s41598-023-42668-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/26/2023] [Accepted: 09/13/2023] [Indexed: 09/17/2023] Open
Abstract
A 3D-supramolecular nickel integrated Ni-SDZ complex was synthesized using sodium salt of sulfadiazine as the ligand and nickel(II) acetate as the metal salt using a condensation process and slow evaporation approach to growing the single crystal. The metal complex was characterized for its composition, functional groups, surface morphology as well as complex 3D structure, by resorting to various analytical techniques. The interacting surface and stability as well as reactivity of the complex were carried out using the DFT platform. From ADMET parameters, human Intestinal Absorbance data revealed that the compound has the potential to be well absorbed, and also Ni-SDZ complex cannot cross the blood-brain barrier (BBB). Additionally, the complex's DNA binding affinity and in-vivo and in-vitro cytotoxic studies were explored utilizing UV-Vis absorbance titration, viscosity measurements, and S. pombe cells and brine shrimp lethality tests. In visible light radiation, the Ni-SDZ complex displayed exceptional photo-degradation characteristics of approximately 70.19% within 70 min against methylene blue (MB).
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Affiliation(s)
- Sachin B Pandya
- Department of Physics, Sardar Patel University, Vallabh Vidyanagar, Anand, 388120, Gujarat, India.
- Vivekanand P.G. College, Govind Guru Tribal University, Banswara, Rajasthan, India.
| | - Bhavesh N Socha
- Department of Physics, Sardar Patel University, Vallabh Vidyanagar, Anand, 388120, Gujarat, India.
- Department of Materials Science, Sardar Patel University, Vallabh Vidyanagar, Anand, 388120, Gujarat, India.
| | - Rahul P Dubey
- Department of Physics, Sardar Patel University, Vallabh Vidyanagar, Anand, 388120, Gujarat, India
| | - Urmila H Patel
- Department of Physics, Sardar Patel University, Vallabh Vidyanagar, Anand, 388120, Gujarat, India
| | - R H Patel
- Department of Materials Science, Sardar Patel University, Vallabh Vidyanagar, Anand, 388120, Gujarat, India
| | - Bhupesh S Bhatt
- Department of Chemistry, Sardar Patel University, Vallabh Vidyanagar, Anand, 388120, Gujarat, India
| | - Parth Thakor
- Bapubhai Desaibhai Patel Institute of Paramedical Sciences, Charotar University of Science and Technology, Changa, India
| | - Sanjay Bhakhar
- Department of Physics, Sardar Patel University, Vallabh Vidyanagar, Anand, 388120, Gujarat, India
| | - Nikhil Vekariya
- Department of Materials Science, Sardar Patel University, Vallabh Vidyanagar, Anand, 388120, Gujarat, India
| | - Jignesh Valand
- Department of Materials Science, Sardar Patel University, Vallabh Vidyanagar, Anand, 388120, Gujarat, India
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12
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Roy R, Sk MF, Tanwar O, Kar P. Computational studies indicated the effectiveness of human metabolites against SARS-Cov-2 main protease. Mol Divers 2023; 27:1587-1602. [PMID: 35978064 PMCID: PMC9385416 DOI: 10.1007/s11030-022-10513-6] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/08/2022] [Accepted: 08/08/2022] [Indexed: 11/04/2022]
Abstract
To fight against the devastating coronavirus disease 2019 (COVID-19), identifying robust anti-SARS-CoV-2 therapeutics from all possible directions is necessary. To contribute to this effort, we selected a human metabolites database containing waters and lipid-soluble metabolites to screen against the 3-chymotrypsin-like proteases (3CLpro) protein of SARS-CoV-2. The top 8 hits from virtual screening displayed a docking score varying between ~ - 11 and ~ - 14 kcal/mol. Molecular dynamics simulations complement the virtual screening study in conjunction with the molecular mechanics generalized Born surface area (MM/GBSA) scheme. Our analyses revealed that (HMDB0132640) has the best glide docking score, - 14.06 kcal/mol, and MM-GBSA binding free energy, - 18.08 kcal/mol. The other three lead molecules are also selected along with the top molecule through a critical inspection of their pharmacokinetic properties. HMDB0132640 displayed a better binding affinity than the other three compounds (HMDB0127868, HMDB0134119, and HMDB0125821) due to increased favorable contributions from the intermolecular electrostatic and van der Waals interactions. Further, we have investigated the ligand-induced structural dynamics of the main protease. Overall, we have identified new compounds that can serve as potential leads for developing novel antiviral drugs against SARS-CoV-2 and elucidated molecular mechanisms of their binding to the main protease. Identification of probable hits from human metabolites against SARS-CoV-2 using integrated computational approaches-Missed against MS.
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Affiliation(s)
- Rajarshi Roy
- Department of Biosciences and Biomedical Engineering, Indian Institute of Technology Indore, Indore, Madhya Pradesh, 453552, India
| | - Md Fulbabu Sk
- Department of Biosciences and Biomedical Engineering, Indian Institute of Technology Indore, Indore, Madhya Pradesh, 453552, India
| | - Omprakash Tanwar
- Department of Pharmacy, Shri G. S. Institute of Technology and Science, Indore, Madhya Pradesh, 452003, India
| | - Parimal Kar
- Department of Biosciences and Biomedical Engineering, Indian Institute of Technology Indore, Indore, Madhya Pradesh, 453552, India.
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13
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Synthesis of biologically active tungsten nanoparticles stabilized by toluene soluble Vitex negundo extracts and evaluation of their antimicrobial, antioxidant and anticancer properties. J Mol Struct 2023. [DOI: 10.1016/j.molstruc.2023.135233] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/06/2023]
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14
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Aljohani FS, Omran OA, Ahmed EA, Al-Farraj ES, Elkady EF, Alharbi A, El-Metwaly NM, Omar Barnawi I, Abu-Dief AM. Design, structural inspection of new bis(1H-benzo[d]imidazol-2-yl)methanone complexes: Biomedical applications and theoretical implementations via DFT and docking approaches. INORG CHEM COMMUN 2023. [DOI: 10.1016/j.inoche.2022.110331] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
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15
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Recent Overview of Potent Antioxidant Activity of Coordination Compounds. Antioxidants (Basel) 2023; 12:antiox12020213. [PMID: 36829772 PMCID: PMC9952845 DOI: 10.3390/antiox12020213] [Citation(s) in RCA: 7] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/06/2022] [Revised: 01/06/2023] [Accepted: 01/16/2023] [Indexed: 01/18/2023] Open
Abstract
During recent decades, the complexation of organic ligands toward several metal ions of s-p and d-block has been applied as a plan to enhance its antioxidant performance. Due to their wide range of beneficial impacts, coordination compounds are widely used in industries, specifically in the medicinal and pharmaceutical fields. The activity is generally improved by chelation consequently knowing that the characteristics of both ligands and metals can lead to the development of greatly active compounds. Chelation compounds are a substitute for using the traditional synthetic antioxidants, because metal chelates present benefits, including a variety in geometry, oxidation states, and coordination number, that assist and favor the redox methods associated with antioxidant action. As well as understanding the best studied anti-oxidative assets of these compounds, coordination compounds are involved in the free radical scavenging process and protecting human organisms from the opposing effects of these radicals. The antioxidant ability can be assessed by various interrelated systems. The methodological modification offers the most knowledge on the antioxidant property of metal chelates. Colorimetric techniques are the most used, though electron paramagnetic resonance (EPR) is an alternative for metallic compounds, since color does not affect the results. Information about systems, with their benefits, and restrictions, permits a dependable valuation of the antioxidant performance of coordination compounds, as well as assisting application in various states wherever antioxidant drugs are required, such as in food protection, appropriate good-packaged foods, dietary supplements, and others. Because of the new exhaustive analysis of organic ligands, it has become a separate field of research in chemistry. The present investigation will be respected for providing a foundation for the antioxidant properties of organic ligands, future tests on organic ligands, and building high-quality antioxidative compounds.
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Al-Gaber MAI, Abd El-Lateef HM, Khalaf MM, Shaaban S, Shawky M, Mohamed GG, Abdou A, Gouda M, Abu-Dief AM. Design, Synthesis, Spectroscopic Inspection, DFT and Molecular Docking Study of Metal Chelates Incorporating Azo Dye Ligand for Biological Evaluation. MATERIALS (BASEL, SWITZERLAND) 2023; 16:897. [PMID: 36769903 PMCID: PMC9917733 DOI: 10.3390/ma16030897] [Citation(s) in RCA: 7] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/25/2022] [Revised: 01/09/2023] [Accepted: 01/13/2023] [Indexed: 06/18/2023]
Abstract
A new heterocyclic azo dye ligand (L) was synthesized by the combination of 4-amino antipyrine with 4-aminophenol. The new Cr(III), Mn(II), Fe(III), Co(II), Ni(II), Cu(II), Zn(II), and Cd(II) complexes were synthesized in excellent yields. The metal chelate structures were elucidated using elemental analyses, FT-IR, 1H-NMR, mass, magnetic moment, diffused reflectance spectral and thermal analysis (TG-DTG), and molar conductivity measurement. According to the FT-IR study, the azo dye ligand exhibited neutral tri-dentate behavior, binding to the metal ions with the azo N, carbonyl O, and protonated phenolic OH. The 1H-NMR spectral study of the Zn(II) complex supported the coordination of the zo dye ligand without proton displacement of the phenolic OH. Diffused reflectance and magnetic moment studies revealed the octahedral geometry of the complexes, as well as their good electrolytic nature, excepting the Zn(II) and Cd(II) complexes, which were nonelectrolytes, as deduced from the molar conductivity study. The theoretical calculations of optimized HOMO-LUMO energies, geometrical parameters, electronic spectra, natural atomic charges, 3D-plots of MEP, and vibrational wavenumbers were computed and elucidated using LANL2DZ and 6-311G (d, p) basis sets of density functional theory (DFT) with the approach of B3LYP DFT and TD-DFT methods. The ligand and complexes have been assayed for their antimicrobial activity and compared with the standard drugs. Most of the complexes have manifested excellent antimicrobial activity against various microbial strains. A molecular docking investigation was also performed, to acquire more information about the binding mode and energy of the ligand and its metal complexes to the Escherichia coli receptor using molecular docking. Altogether, the newly created ligand and complexes showed positive antibacterial effects and are worth future study.
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Affiliation(s)
| | - Hany M. Abd El-Lateef
- Department of Chemistry, College of Science, King Faisal University, Al-Ahsa 31982, Saudi Arabia
- Department of Chemistry, Faculty of Science, Sohag University, Sohag 82534, Egypt
| | - Mai M. Khalaf
- Department of Chemistry, College of Science, King Faisal University, Al-Ahsa 31982, Saudi Arabia
- Department of Chemistry, Faculty of Science, Sohag University, Sohag 82534, Egypt
| | - Saad Shaaban
- Department of Chemistry, College of Science, King Faisal University, Al-Ahsa 31982, Saudi Arabia
- Chemistry Department, Faculty of Science, Mansoura University, Mansoura 35516, Egypt
| | - Mohamed Shawky
- Chemistry Department, Faculty of Science, Cairo University, Giza 12613, Egypt
| | - Gehad G. Mohamed
- Chemistry Department, Faculty of Science, Cairo University, Giza 12613, Egypt
- Nanoscience Department, Basic and Applied Sciences Institute, Egypt-Japan University of Science and Technology, New Borg El Arab, Alexandria 21934, Egypt
| | - Aly Abdou
- Department of Chemistry, Faculty of Science, Sohag University, Sohag 82534, Egypt
| | - Mohamed Gouda
- Department of Chemistry, College of Science, King Faisal University, Al-Ahsa 31982, Saudi Arabia
| | - Ahmed M. Abu-Dief
- Department of Chemistry, Faculty of Science, Sohag University, Sohag 82534, Egypt
- Chemistry Department, College of Science, Taibah University, Medinah 42344, Saudi Arabia
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Moxifloxacin Metal Complexes: Synthesis, Characterisation, Antimicrobial and Antidiabetic Activities with Docking Studies. Bioinorg Chem Appl 2023. [DOI: 10.1155/2023/3754561] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2023] Open
Abstract
Six new metal complexes of Fe(III), Cu(II), and Hg(II) were synthesised, i.e., three (2, 4, and 5) with moxifloxacin (mono-ligand) and the other three (1, 3 and 6) with moxifloxacin and hydrazine (biligand). These were characterised through UV-Vis, FT-IR, elemental analysis (CHN), atomic absorption spectroscopy, TGA, scanning electron microscopy (SEM), and powder XRD studies. Further, all of these compounds were screened for their antimicrobial, cytotoxic, and antidiabetic potential. The study revealed that the synthesised metal complexes possess an excellent ability to become antifungal agents compared to moxifloxacin. Additionally, the cytotoxicity of compounds 1, 3, and 4 was in the acceptable range with much better antidiabetic potential as compared to the ligand moxifloxacin. Interestingly, the α-amylase inhibition activity of complexes 1 and 3 was found very close to the standard drug acarbose. Furthermore, the computational studies also authenticate the results of the antidiabetic potential of complexes 1, 3, and 4 by presenting the necessary interactions of these compounds with their respective binding sites. The overall results indicate that the antifungal and antidiabetic ability of moxifloxacin is enhanced significantly by complexation with the given metals and the secondary ligand, thereby making it a suitable lead compound for yet another avenue of an antifungal and antidiabetic agent in the field of drug discovery and development.
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18
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Spectral, Thermal and Photocatalytic Properties of Transition Metal Complexes Based on a Ligand Derived from Gallic Acid and Ethylenediamine. ARABIAN JOURNAL FOR SCIENCE AND ENGINEERING 2022. [DOI: 10.1007/s13369-022-07534-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
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19
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Al-Shamry AA, Khalaf MM, El-Lateef HMA, Yousef TA, Mohamed GG, El-Deen KMK, Gouda M, Abu-Dief AM. Development of New Azomethine Metal Chelates Derived from Isatin: DFT and Pharmaceutical Studies. MATERIALS (BASEL, SWITZERLAND) 2022; 16:83. [PMID: 36614421 PMCID: PMC9821024 DOI: 10.3390/ma16010083] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/05/2022] [Revised: 11/30/2022] [Accepted: 12/19/2022] [Indexed: 06/17/2023]
Abstract
Through the condensation of isatin (indoline-2, 3-dione) and aniline in a 1:1 ratio, a Schiff base ligand was synthesized and characterized via (1H-NMR, mass, IR, UV-Vis) spectra. Elemental analyses, spectroscopy (1H-NMR, mass, UV-Vis), magnetic susceptibility, molar conductivity, mass spectra, scanning electron microscope (SEM), and thermal analysis have all been used to characterize a series of Cr(III), Mn(II), Fe(III), Co(II), Ni(II), Cu(II), Zn(II), and Cd(II) metal complexes derived from the titled ligand. The metal-to-ligand ratio is 1:1, according to the analytical data. The Schiff base ligand displayed bidentate behavior with NO coordination sites when it bonded to metal ions, as seen by the IR spectra. The magnetic moment measurement and UV-Vis spectral investigation showed the octahedral geometry of the Cr(III), Fe(III), Co(II), Ni(II), and Zn(II) complexes, whereas they suggested the tetrahedral geometry of the Mn(II), Cu(II), and Cd(II) complexes. The thermal analysis study confirmed the presence of both hydrated and coordinated water molecules in all the compounds, except for the Mn(II) complex, and showed that the complexes decomposed in three or five decomposition steps leaving the corresponding metal oxide as a residue. The ligand and its metal complexes' antibacterial efficacy were evaluated. The findings showed that the metal complexes had stronger antibacterial properties than the ligand alone. The ligand and its metal complexes' anticancer properties were also investigated. A DFT investigation is also reported to gather information regarding the electronic features of the ligand and its metal complexes. Finally, drug-likeness and ADME characteristics were also calculated as parameters.
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Affiliation(s)
- Abdulrhman A. Al-Shamry
- Department of Chemistry, College of Science, King Faisal University, Al-Ahsa 31982, Saudi Arabia
| | - Mai M. Khalaf
- Department of Chemistry, College of Science, King Faisal University, Al-Ahsa 31982, Saudi Arabia
- Department of Chemistry, Faculty of Science, Sohag University, Sohag 82534, Egypt
| | - Hany M. Abd El-Lateef
- Department of Chemistry, College of Science, King Faisal University, Al-Ahsa 31982, Saudi Arabia
- Department of Chemistry, Faculty of Science, Sohag University, Sohag 82534, Egypt
| | - Tarek A. Yousef
- Department of Chemistry, Science College, Imam Mohammad Ibn Saud Islamic University (IMSIU), P.O. Box 90950, Riyadh 11623, Saudi Arabia
- Toxic and Narcotic Drug, Forensic Medicine Department, Mansoura Laboratory, Medicolegal Organization, Ministry of Justice, Cairo 11435, Egypt
| | - Gehad G. Mohamed
- Chemistry Department, Faculty of Science, Cairo University, Giza 12613, Egypt
- Nanoscience Department, Basic and Applied Sciences Institute, Egypt-Japan University of Science and Technology, New Borg El Arab 21934, Egypt
| | | | - Mohamed Gouda
- Department of Chemistry, College of Science, King Faisal University, Al-Ahsa 31982, Saudi Arabia
| | - Ahmed M. Abu-Dief
- Department of Chemistry, Faculty of Science, Sohag University, Sohag 82534, Egypt
- Department of Chemistry, College of Science, Taibah University, Medina 42344, Saudi Arabia
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20
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Waheeb AS. Spectroscopic, characterization and bioactivity studies of new Ni (II), Cu (II) and Ag (I) complexes with didentate (N,N) donar azo dye ligand. J Mol Struct 2022. [DOI: 10.1016/j.molstruc.2022.134729] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
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21
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Synthesis and Structural investigation of o-Vanillin scaffold Schiff base metal complexes: Biomolecular interaction and molecular docking studies. J Mol Liq 2022. [DOI: 10.1016/j.molliq.2022.120941] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/02/2022]
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22
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Molecular docking, Synthesis and Antimicrobial Evaluation of Metal Complexes with Schiff Base. RESULTS IN CHEMISTRY 2022. [DOI: 10.1016/j.rechem.2022.100650] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022] Open
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23
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Kamel MS, Aboelez MO, Elnagar MR, Shokr EK, Selim HMRM, Abdel‐Ghany HE, Drar AM, Belal A, El Hamd MA, Abd El Aleem Ali Ali El‐Remaily M. Green Synthesis Design, Spectroscopic Characterizations, and Biological Activities of Novel Pyrrole Derivatives: An Application to Evaluate Their Toxic Effect on
Cotton Aphids. ChemistrySelect 2022. [DOI: 10.1002/slct.202203191] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Affiliation(s)
- Moumen S. Kamel
- Department of Chemistry Faculty of Science Sohag University Sohag 82524 Egypt
| | - Moustafa O. Aboelez
- Department of Pharmaceutical Chemistry Faculty of Pharmacy Sohag University Sohag 82524 Egypt
| | - Mohamed R. Elnagar
- Department of Pharmacology and Toxicology Faculty of Pharmacy Al-Azhar University Cairo 11823 Egypt
- Department of Pharmacology College of Pharmacy The Islamic University Najaf 54001 Iraq
| | - Elders Kh. Shokr
- Department of Physics Faculty of Science Sohag University Sohag 82524 Egypt
| | - Heba Mohammed Refat M. Selim
- Department of Pharmaceutical Sciences Faculty of Pharmacy Al-Maarefa University Diriyah 13713 Riyadh Saudi Arabia
- Depaetment of Microbiology and Immunology Faculty of Pharmacy Al-Azhar University Egypt
| | | | - Ali M. Drar
- Dpartement of Insecticides Plant Protection Research Institute Agriculture Research Center Dokki Giza Egypt
| | - Amany Belal
- Department of Medicinal Chemistry Faculty of Pharmacy Beni-Suef University Beni-Suef 62514 Egypt
- Department of Pharmaceutical Chemistry College of Pharmacy Taif University Taif 21944 Saudi Arabia
| | - Mohamed A. El Hamd
- Department of Pharmaceutical Sciences College of Pharmacy Shaqra University Shaqra 11961 Saudi Arabia
- Department of Pharmaceutical Analytical Chemistry Faculty of Pharmacy South Valley University Qena 83523 Egypt
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Gholivand K, Koupaei MHH, Mohammadpanah F, Roohzadeh R, Fallah N, Pooyan M, Satari M, Pirastehfar F. A novel phospho triazine compound serving as an anticancer and antibacterial agent: An experimental-computational investigation. J Mol Struct 2022. [DOI: 10.1016/j.molstruc.2022.133024] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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25
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Veena K, Chandrasekhar S, Raghu M, Yogesh Kumar K, Pradeep Kumar C, Alswieleh AM, Anusuya Devi V, Prashanth M, Jeon BH. Facile green synthesis of samarium sesquioxide nanoparticle as a quencher for biologically active imidazole analogues: Computational and experimental insights. J Mol Struct 2022. [DOI: 10.1016/j.molstruc.2022.133235] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
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26
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El-Lateef HMA, El-Dabea T, Khalaf MM, Abu-Dief AM. Innovation of Imine Metal Chelates as Corrosion Inhibitors at Different Media: A Collective Study. Int J Mol Sci 2022; 23:9360. [PMID: 36012623 PMCID: PMC9409127 DOI: 10.3390/ijms23169360] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/29/2022] [Revised: 07/27/2022] [Accepted: 08/09/2022] [Indexed: 01/03/2023] Open
Abstract
The corrosion inhibition of transition metal chelates derived from Schiff base ligands was tested for (mild, copper, stainless, aluminum and carbon) steel in various concentrations of (HCl, HNO3 and H2SO4) acidic medium at 25 °C through (weight loss, potentiodynamic polarization, polarization curves, electrochemical impedance spectroscopy (EIS) and open circuit potential measurements (OCP)) techniques. The studied compounds were identified with various spectral, analytical and physico-chemical techniques. It was observed that the investigated compounds had a significant inhibitory impact on the corrosion of diverse steels in the medium investigated. The analysis shows that increasing the dose of the studied complexes improves the corresponding inhibitory efficiency values. Negative results of Gibb's free adsorption energy (ΔGads0) prove the suppression process's spontaneous and physical adsorption, which contradicts the Langmuir adsorption isotherm. As a result of this insight, a novel bridge between nuclearity driven coordinated inorganic chemistry and materials, as well as corrosion control, has been built. This review provides an overview of the use of Schiff bases and associated transition metals as potential corrosion inhibitors, including the factors that influence their application.
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Affiliation(s)
- Hany M. Abd El-Lateef
- Department of Chemistry, College of Science, King Faisal University, P.O. Box 400, Al-Ahsa 31982, Saudi Arabia
- Chemistry Department, Faculty of Science, Sohag University, Sohag 82534, Egypt
| | - Tarek El-Dabea
- Chemistry Department, Faculty of Science, Sohag University, Sohag 82534, Egypt
| | - Mai M. Khalaf
- Department of Chemistry, College of Science, King Faisal University, P.O. Box 400, Al-Ahsa 31982, Saudi Arabia
- Chemistry Department, Faculty of Science, Sohag University, Sohag 82534, Egypt
| | - Ahmed M. Abu-Dief
- Chemistry Department, Faculty of Science, Sohag University, Sohag 82534, Egypt
- Chemistry Department, College of Science, Taibah University, Madinah 344, Saudi Arabia
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27
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Abdel‐Kader NS, Moustafa H, El‐Ansary AL, Farghaly AM. DFT calculations for new coumarin Schiff base complexes as candidates for in vitro and in silico biological applications. Appl Organomet Chem 2022. [DOI: 10.1002/aoc.6840] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Affiliation(s)
| | - Hussein Moustafa
- Chemistry Department. Faculty of Science Cairo University Giza Egypt
| | - Aida L. El‐Ansary
- Chemistry Department. Faculty of Science Cairo University Giza Egypt
| | - Aya M. Farghaly
- Center of Environmental Hazard Mitigation Cairo University Giza Egypt
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Khalaf MM, Abd El-Lateef HM, Gouda M, Sayed FN, Mohamed GG, Abu-Dief AM. Design, Structural Inspection and Bio-Medicinal Applications of Some Novel Imine Metal Complexes Based on Acetylferrocene. MATERIALS 2022; 15:ma15144842. [PMID: 35888309 PMCID: PMC9317992 DOI: 10.3390/ma15144842] [Citation(s) in RCA: 11] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 05/26/2022] [Revised: 06/30/2022] [Accepted: 07/05/2022] [Indexed: 02/01/2023]
Abstract
Some novel imine metal chelates with Cr3+, Mn2+, Fe3+, Co2+, Ni2+, Cu2+, Zn2+, and Cd2+ cations were produced from 2-acetylferrocene and 3-aminophenol. The new acetylferrocene azomethine ligand ((Z)-cyclopenta-1,3-dien-1-yl(2-(1-((3-hydroxyphenyl)imino)ethyl)cyclopenta-2,4-dien-1-yl)iron) and its metal ion chelates were constructed and elucidated using FT-IR, UV/Vis, 1HNMR, DTA/TGA, CHNClM studies, mass spectrometry and SEM analysis. According to the TGA/DTG investigation, the ferrocene moiety spontaneously disintegrates to liberate FeO. The morphology of the free acetylferrocene azomethine via SEM analysis was net-shaped with a size of 64.73 nm, which differed in Cd(II) complex to be a spongy shape with a size of 42.43 nm. The quantum chemical features of the azomethine ligand (HL) were computed, and its electronic and molecular structure was refined theoretically. The investigated acetylferrocene imine ligand behaves as bidinetate ligand towards the cations under study to form octahedral geometries in case of all complexes except in case of Zn2+ is tetrahedral. Various microorganisms were used to investigate the anti-pathogenic effects of the free acetylferrocene azomethine ligand and its metal chelates. Moreover, the prepared ligand and its metal complexes were tested for anticancer activity utilizing four different concentrations against the human breast cancer cell line (MCF7) and the normal melanocyte cell line (HBF4). Furthermore, the binding of 3-aminophenol, 2-acetylferrocene, HL, Mn2+, Cu2+, and Cd2+ metal chelates to the receptor of breast cancer mutant oxidoreductase was discovered using molecular docking (PDB ID: 3HB5).
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Affiliation(s)
- Mai M. Khalaf
- Department of Chemistry, College of Science, King Faisal University, Al-Ahsa 31982, Saudi Arabia;
- Department of Chemistry, Faculty of Science, Sohag University, Sohag 82534, Egypt
- Correspondence: (M.M.K.); (H.M.A.E.-L.); (A.M.A.-D.)
| | - Hany M. Abd El-Lateef
- Department of Chemistry, College of Science, King Faisal University, Al-Ahsa 31982, Saudi Arabia;
- Department of Chemistry, Faculty of Science, Sohag University, Sohag 82534, Egypt
- Correspondence: (M.M.K.); (H.M.A.E.-L.); (A.M.A.-D.)
| | - Mohamed Gouda
- Department of Chemistry, College of Science, King Faisal University, Al-Ahsa 31982, Saudi Arabia;
| | - Fatma N. Sayed
- Chemistry Department, Faculty of Science, Cairo University, Giza 12613, Egypt; (F.N.S.); (G.G.M.)
| | - Gehad G. Mohamed
- Chemistry Department, Faculty of Science, Cairo University, Giza 12613, Egypt; (F.N.S.); (G.G.M.)
- Nanoscience Department, Basic and Applied Sciences Institute, Egypt-Japan University of Science and Technology, New Borg El Arab, Alexandria 21934, Egypt
| | - Ahmed M. Abu-Dief
- Department of Chemistry, Faculty of Science, Sohag University, Sohag 82534, Egypt
- Department of Chemistry, College of Science, Taibah University, Madinah 344, Saudi Arabia
- Correspondence: (M.M.K.); (H.M.A.E.-L.); (A.M.A.-D.)
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M.Abu-Dief A, Alotaibi NH, S.Al-Farraj E, Qasem HA, Alzahrani S, Mahfouz MK, Abdou A. Fabrication, Structural elucidation, DFT calculation and molecular docking studies of some novel adenine imine chelates for biomedical applications. J Mol Liq 2022. [DOI: 10.1016/j.molliq.2022.119961] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
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30
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Egu SA, Ali I, Khan KM, Chigurupati S, Qureshi U, Salar U, Taha M, Felemban SG, Venugopal V, Ul-Haq Z. Syntheses, in vitro, and in silico studies of rhodanine-based schiff bases as potential α-amylase inhibitors and radicals (DPPH and ABTS) scavengers. Mol Divers 2022; 27:767-791. [PMID: 35604512 DOI: 10.1007/s11030-022-10454-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/27/2022] [Accepted: 04/27/2022] [Indexed: 10/18/2022]
Abstract
A two-step reaction method was used to synthesize a series of rhodanine-based Schiff bases (2-33) that were characterized using spectroscopic techniques. All compounds were assessed for α-amylase inhibitory and radical scavenging (DPPH and ABTS) activities. In comparison to the standard acarbose (IC50 = 9.08 ± 0.07 µM), all compounds demonstrated good to moderate α-amylase inhibitory activity (IC50 = 10.91 ± 0.08-61.89 ± 0.102 µM). Compounds also demonstrated significantly higher DPPH (IC50 = 10.33 ± 0.02-96.65 ± 0.03 µM) and ABTS (IC50 = 12.01 ± 0.12-97.47 ± 0.13 µM) radical scavenging activities than ascorbic acid (DPPH, IC50 = 15.08 ± 0.03 µM; ABTS, IC50 = 16.09 ± 0.17 µM). The limited structure-activity relationship (SAR) suggests that the position and nature of the substituted groups on the phenyl ring have a vital role in varying inhibitory potential. Among the series, compounds with an electron-withdrawing group at the para position showed the highest potency. Kinetic studies revealed that the compounds followed a competitive mode of inhibition. Molecular docking results are found to agree with experimental findings, showing that compounds reside in the active pocket due to the main rhodanine moiety.
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Khalaf MM, El-Lateef HMA, Alhadhrami A, Sayed FN, Mohamed GG, Gouda M, Shaaban S, Abu-Dief AM. Synthesis, Spectroscopic, Structural and Molecular Docking Studies of Some New Nano-Sized Ferrocene-Based Imine Chelates as Antimicrobial and Anticancer Agents. MATERIALS (BASEL, SWITZERLAND) 2022; 15:3678. [PMID: 35629702 PMCID: PMC9144163 DOI: 10.3390/ma15103678] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 04/20/2022] [Revised: 05/17/2022] [Accepted: 05/18/2022] [Indexed: 11/24/2022]
Abstract
The newly synthesized organometallic acetyl ferrocene imine ligand (HL) was obtained by the direct combination of 2-acetyl ferrocene with 2-aminothiophenol. The electronic and molecular structure of acetyl ferrocene imine ligand (HL) was refined theoretically and the chemical quantum factors were computed. Complexes of the acetyl ferrocene imine ligand with metal(II)/(III) ions (Cr(III), Mn(II), Fe(III), Co(II), Ni(II), Cu(II), Zn(II) and Cd(II)) were fabricated. They were inspected by thermal (DTG/TG), spectroscopic techniques (FT-IR, 1H NMR, mass, UV-Vis), molar conductivity, and CHNClM to explicate their structures. Studies using scanning electron microscope (SEM) were conducted on the free acetyl ferrocene imine ligand and its Cd(II) chelate to confirm their nano-structure. To collect an idea about the effect of metal ions on anti-pathogenic properties upon chelation, the newly synthesized acetyl ferrocene imine ligand and some of its metal chelates were tested against a variety of microorganisms, including Bacillus subtilis, Staphylococcus aureus, Salmonella typhimurium, Escherichia coli, Aspergillus fumigatus, and Candida albicans. The ligand and its metal chelate were tested for cytotoxic activity in human cancer (MCF-7 cell viability) and human melanocyte cell line HBF4. It was discovered that the Cd(II) chelate had the lowest IC50 of the three and thus had the prior activity. Molecular docking was utilized to investigate the interaction of acetyl ferrocene imine ligand (HL) with the receptors of the vascular endothelial growth factor receptor VEGFR (PDB ID: 1Y6a), human Topo IIA-bound G-segment DNA crystal structure (PDB ID: 2RGR), and Escherichia coli crystal structure (PDB ID: 3T88).
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Affiliation(s)
- Mai M. Khalaf
- Department of Chemistry, College of Science, King Faisal University, Al-Ahsa 31982, Saudi Arabia; (H.M.A.E.-L.); (M.G.); (S.S.)
- Department of Chemistry, Faculty of Science, Sohag University, Sohag 82534, Egypt
| | - Hany M. Abd El-Lateef
- Department of Chemistry, College of Science, King Faisal University, Al-Ahsa 31982, Saudi Arabia; (H.M.A.E.-L.); (M.G.); (S.S.)
- Department of Chemistry, Faculty of Science, Sohag University, Sohag 82534, Egypt
| | - Abdulrahman Alhadhrami
- Department of Chemistry, Colleague of Science, Taif University, P.O. Box 11099, Taif 21944, Saudi Arabia;
| | - Fatma N. Sayed
- Chemistry Department, Faculty of Science, Cairo University, Giza 12613, Egypt; (F.N.S.); (G.G.M.)
| | - Gehad G. Mohamed
- Chemistry Department, Faculty of Science, Cairo University, Giza 12613, Egypt; (F.N.S.); (G.G.M.)
- Nanoscience Department, Basic and Applied Sciences Institute, Egypt-Japan University of Science and Technology, New Borg El Arab, Alexandria 21934, Egypt
| | - Mohamed Gouda
- Department of Chemistry, College of Science, King Faisal University, Al-Ahsa 31982, Saudi Arabia; (H.M.A.E.-L.); (M.G.); (S.S.)
| | - Saad Shaaban
- Department of Chemistry, College of Science, King Faisal University, Al-Ahsa 31982, Saudi Arabia; (H.M.A.E.-L.); (M.G.); (S.S.)
- Chemistry Department, Faculty of Science, Mansoura University, Mansoura 35516, Egypt
| | - Ahmed M. Abu-Dief
- Department of Chemistry, Faculty of Science, Sohag University, Sohag 82534, Egypt
- Department of Chemistry, College of Science, Taibah University, P.O. Box 344, Madinah 42353, Saudi Arabia
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Abd El‐Lateef HM, Desoky M. Mohamad A, Shehata MR, Abu‐Dief AM. Targeted synthesis of two iron (III) tetradentate dibasic chelating Schiff base complexes towards inhibition of acidic induced steel corrosion: Empirical and DFT insights. Appl Organomet Chem 2022. [DOI: 10.1002/aoc.6718] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Affiliation(s)
- Hany M. Abd El‐Lateef
- Department of Chemistry, College of Science King Faisal University Al‐Ahsa Saudi Arabia
- Chemistry Department, Faculty of Science Sohag University Sohag Egypt
| | | | | | - Ahmed M. Abu‐Dief
- Chemistry Department, Faculty of Science Sohag University Sohag Egypt
- Chemistry Department, College of Science Taibah University Madinah Saudi Arabia
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El-Lateef HMA, Khalaf MM, Shehata MR, Abu-Dief AM. Fabrication, DFT Calculation, and Molecular Docking of Two Fe(III) Imine Chelates as Anti-COVID-19 and Pharmaceutical Drug Candidate. Int J Mol Sci 2022; 23:ijms23073994. [PMID: 35409353 PMCID: PMC8999679 DOI: 10.3390/ijms23073994] [Citation(s) in RCA: 15] [Impact Index Per Article: 7.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/15/2022] [Revised: 03/31/2022] [Accepted: 04/01/2022] [Indexed: 02/01/2023] Open
Abstract
Two tetradentate dibasic chelating Schiff base iron (III) chelates were prepared from the reaction of 2,2′-((1E,1′E)-(1,2-phenylenebis(azanylylidene))bis(methanylylidene))bis(4-bromophenol) (PDBS) and 2,2′-((1E,1′E)-((4-chloro-1,2-phenylene)bis(azanylylidene))-bis(methanylylidene))bis(4-bromophenol) (CPBS) with Fe3+ ions. The prepared complexes were fully characterized with spectral and physicochemical tools such as IR, NMR, CHN analysis, TGA, UV-visible spectra, and magnetic moment measurements. Moreover, geometry optimizations for the synthesized ligands and complexes were conducted using the Gaussian09 program through the DFT approach, to find the best structures and key parameters. The prepared compounds were tested as antimicrobial agents against selected strains of bacteria and fungi. The results suggests that the CPBSFe complex has the highest activity, which is close to the reference. An MTT assay was used to screen the newly synthesized compounds against a variety of cell lines, including colon cancer cells, hepatic cellular carcinoma cells, and breast carcinoma cells. The results are expressed by IC50 value, in which the 48 µg/mL value of the CPBSFe complex indicates its success as a potential anticancer agent. The antioxidant behavior of the two imine chelates was studied by DPPH assay. All the tested imine complexes show potent antioxidant activity compared to the standard Vitamin C. Furthermore, the in vitro assay and the mechanism of binding and interaction efficiency of the tested samples with the receptor of COVID-19 core protease viral protein (PDB ID: 6lu7) and the receptor of Gram-negative bacteria (Escherichia coli, PDB ID: 1fj4) were investigated using molecular docking experiments.
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Affiliation(s)
- Hany M. Abd El-Lateef
- Department of Chemistry, College of Science, King Faisal University, P.O. Box 400, Al-Ahsa 31982, Saudi Arabia;
- Chemistry Department, Faculty of Science, Sohag University, Sohag 82534, Egypt
- Correspondence: (H.M.A.E.-L.); (A.M.A.-D.)
| | - Mai M. Khalaf
- Department of Chemistry, College of Science, King Faisal University, P.O. Box 400, Al-Ahsa 31982, Saudi Arabia;
- Chemistry Department, Faculty of Science, Sohag University, Sohag 82534, Egypt
| | - Mohamed R. Shehata
- Chemistry Department, Faculty of Science, Cairo University, Giza P.O. Box 12613, Egypt;
| | - Ahmed M. Abu-Dief
- Department of Chemistry, College of Science, King Faisal University, P.O. Box 400, Al-Ahsa 31982, Saudi Arabia;
- Chemistry Department, College of Science, Taibah University, Madinah P.O. Box 344, Saudi Arabia
- Correspondence: (H.M.A.E.-L.); (A.M.A.-D.)
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Photodegradation of Azathioprine in the Presence of Sodium Thiosulfate. Int J Mol Sci 2022; 23:ijms23073975. [PMID: 35409337 PMCID: PMC8999472 DOI: 10.3390/ijms23073975] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/20/2022] [Revised: 03/24/2022] [Accepted: 03/31/2022] [Indexed: 11/17/2022] Open
Abstract
The effect of sodium thiosulfate (ST) on the photodegradation of azathioprine (AZA) was analyzed by UV-VIS spectroscopy, photoluminescence (PL), FTIR spectroscopy, Raman scattering, X-ray photoelectron (XPS) spectroscopy, thermogravimetry (TG) and mass spectrometry (MS). The PL studies highlighted that as the ST concentration increased from 25 wt.% to 75 wt.% in the AZA:ST mixture, the emission band of AZA gradual downshifted to 553, 542 and 530 nm. The photodegradation process of AZA:ST induced: (i) the emergence of a new band in the 320–400 nm range in the UV-VIS spectra of AZA and (ii) a change in the intensity ratio of the photoluminescence excitation (PLE) bands in the 280–335 and 335–430 nm spectral ranges. These changes suggest the emergence of new compounds during the photo-oxidation reaction of AZA with ST. The invoked photodegradation compounds were confirmed by studies of the Raman scattering, the FTIR spectroscopy and XPS spectroscopy through: (i) the downshift of the IR band of AZA from 1336 cm−1 to 1331 cm−1, attributed to N-C-N deformation in the purine ring; (ii) the change in the intensity ratio of the Raman lines peaking at 1305 cm−1 and 1330 cm−1 from 3.45 to 4.57, as the weight of ST in the AZA:ST mixture mass increased; and (iii) the emergence of a new band in the XPS O1s spectrum peaking at 531 eV, which was associated with the C=O bond. Through correlated studies of TG-MS, the main key fragments of ST-reacted AZA are reported.
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