Integration of earthworms and arbuscular mycorrhizal fungi into phytoremediation of cadmium-contaminated soil by Solanum nigrum L

Earthworm mucus contributes significantly to the accumulation of soil cadmium in tomato seedlings

Whether earthworm mucus affects Cd transport behavior in soil-plant systems remains uncertain. Consequently, this study thoroughly assessed the impacts of earthworm mucus on plant growth and physiological responses, plant Cd accumulation, translocation, and distribution, as well as soil characteristics and Cd fractionation in a soil-plant (tomato seedling) system. Results demonstrated that the earthworm inoculation considerably enhanced plant Cd uptake and decreased plant Cd translocation, the effects of which were appreciably less significant than those of the earthworm mucus. This suggested that earthworm mucus may play a crucial role in the way earthworms influence plant Cd uptake and translocation. Moreover, the artificial mucus, which contained identical inorganic nitrogen contents to those in earthworm mucus, had no significant effect on plant Cd accumulation or translocation, implying that components other than inorganic nitrogen in the earthworm mucus may have contributed significantly to the overall effects of the mucus. Compared with the control, the earthworm mucus most substantially increased the root Cd content, the Cd accumulation amount of root and whole plant, and root Cd BCF by 93.7 %, 221.3 %, 72.2 %, and 93.7 %, respectively, while notably reducing the Cd TF by 48.2 %, which may be ascribed to the earthworm mucus's significant impacts on tomato seedling growth and physiological indicators, its considerable influences on the subcellular components and chemical species of root Cd, and its substantial effects on the soil characteristics and soil Cd fractionation, as revealed by correlation analysis. Redundancy analysis further suggested that the most prominent impacts of earthworm mucus may have been due to its considerable reduction of soil pH, improvement of soil DOC content, and enhancement of the exchangeable Cd fraction in soil. This work may help better understand how earthworm mucus influences the transport behavior of metals in soil-plant systems.

Cenococcum geophilum impedes cadmium toxicity in Pinus massoniana by modulating nitrogen metabolism

Nitrogen (N) is of great significance to the absorption, distribution and detoxification of cadmium (Cd). Ectomycorrhizal fungi (EMF) are able to affect the key processes of plant N uptake to resist Cd stress, while the mechanism is still unclear. Therefore, we explored potential strategies of Cenococcum geophilum (C. geophilum) symbiosis to alleviate Cd stress in Pinus massoniana (P. massoniana) from the perspective of plant N metabolism and soil N transformation. The results showed that inoculation of C. geophilum significantly increased the activities of NR, NiR and GS in the shoots and roots of P. massoniana, thereby promoting the assimilation of NO3- and NH4+ into amino acids. Moreover, C. geophilum promoted soil urease and protease activities, but decreased soil NH4+ content, indicating that C. geophilum might increase plant uptake of soil inorganic N. qRT-PCR results showed that C3 symbiosis significantly up-regulated the expression of genes encoding functions involved in NH4+ uptake (AMT3;1), NO3- uptake (NRT2.1, NRT2.4, NRT2.9), as well as Cd resistance (ABCC1 and ABCC2), meanwhile down-regulated the expression of NRT7.3, Cd transporter genes (HMA2 and NRAMP3) in the roots of P. massoniana seedlings. These results demonstrated that C. geophilum was able to alleviate Cd stress by increasing the absorption and assimilation of inorganic N in plants and inhibiting the transport of Cd from roots to shoots, which provided new insights into how EMF improved host resistance to abiotic stress.

The trade-off regulation of arbuscular mycorrhiza on alfalfa growth dose-dependent on gradient Mo exposure

Molybdenum (Mo) is an essential nutrient for leguminous plants, but the effects of Mo exposure on plant growth, especially in relation to soil microorganisms, are not fully understood. This study employed alfalfa (Medicago sativa L.) to evaluate the physiochemical responses to gradient soil Mo variations and explore the potential regulatory role of rhizosphere microorganism - arbuscular mycorrhizal fungi (AMF) in modulating Mo's impact on plant physiology, with a focus on metabolic pathways. The results showed that Mo exerted hormetic effect (facilitation at low doses; inhibition at high doses) on alfalfa growth, promoting biomass (below 90.94 mg/kg, with a 63.98 % maximum increase), root length (below 657.11 mg/kg, with a 39.29 % maximum increase), and plant height (below 304.03 mg/kg, with an 18.4 % maximum increase). Excess Mo (1000 mg/kg) resulted in a reduction in photosynthesis and biomass growth due to increased oxidative stress (p < 0.05). Within the stimulatory zones, AMF enhanced Mo accumulation in alfalfa, augmenting its phytological effects. Exceed the stimulatory zones, AMF enhanced alfalfa Fe uptake and reduced the generation of reactive oxygen species (ROS) induced by excess Mo by shifting the redox homeostasis-controlled enzyme from peroxidase (POD) to superoxide dismutase (SOD), thereby improving alfalfa's tolerance to Mo. Metabolomic analysis further revealed that AMF promoted the biosynthesis of indole acetic acid (IAA) and various amino acids in Mo-stressed alfalfa (p < 0.05), which accelerated alfalfa growth and mitigated Mo-induced phytotoxicity. These insights provide a foundation for developing sustainable management strategies for Mo-exposed soils using AMF inoculants, such as minimizing Mo fertilizer application in Mo-deficient soils and facilitating the reclamation of Mo-contaminated soils.

Earthworm gut bacteria facilitate cadmium immobilization through the formation of CdS nanoparticles

Gut bacteria of earthworm Amynthas hupeiensis exhibit significant potential for the in-situ remediation of cadmium (Cd)-contaminated soil. However, the mechanisms by which these gut bacteria immobilize and tolerate Cd remain elusive. The composition of the gut bacterial community was characterized by high-throughput sequencing. Cd-tolerant bacteria were isolated from the gut, and their roles in Cd immobilization, as well as their tolerance mechanisms, were explored through chemical characterization and transcriptome analysis. The predominant taxa in the gut bacterial community included unclassified Enterobacteriaceae, Citrobacter, and Bacillus, which were distinctly different from those in the surrounding soil. Notably, the most Cd-tolerant gut bacterium, Citrobacter freundii DS strain, immobilized 63.61% of Cd2+ within 96 h through extracellular biosorption and intracellular bioaccumulation of biosynthetic CdS nanoparticles, and modulation of solution pH and NH4+ concentration. Moreover, the characteristic signals of CdS were also observed in the gut content of A. hupeiensis when the sterilized Cd-contaminated soil was inoculated with C. freundii. The primary pathways involved in the response of C. freundii to Cd stress included the regulation of ABC transporters, bacterial chemotaxis, cell motility, oxidative phosphorylation, and two-component system. In conclusion, C. freundii facilitates Cd immobilization both in vitro and in vivo, thereby enhancing the host earthworm's adaptation to Cd-contaminated soil.

Selection of Reference Genes for Expression Normalization by RT-qPCR in Dracocephalum moldavica L

Dracocephalum moldavica is widely used as an ornamental, medicine, and perfume in industry. Real-time fluorescence quantitative polymerase chain reaction (RT-qPCR) is widely and accurately utilized for gene expression evaluations. Selecting optimal reference genes is essential for normalizing RT-qPCR results. However, the identification of suitable reference genes in D. moldavica has not been documented. A total of 12 reference genes in D. moldavica were identified by PEG6000 (15%) treatment under hypertonia conditions in different tissues (roots, stem, leaves, flower, seeds and sepal) and during three stages of flower development, then used to validate the expression stability. There were four algorithms (delta Ct, geNorm, NormFinder, and BestKeeper) used to analyze the stability. Finally, the RefFinder program was employed to evaluate the candidate reference genes' stability. The results showed that ACTIN, glyceraldehyde-3-phosphate dehydrogenase (GAPDH), and EF1α (elongation factor-1α) were stable reference genes under the PEG6000 treatment. Heat shock protein 70 (HSP70) was the most stable gene across different flower development stages. ADP-ribosylation factor (ARF) was the most stable gene in different tissues and total samples. This study provides reliable gene expression studies for future research in D. moldavica.

Conjoint analysis of physio-biochemical, transcriptomic, and metabolomic reveals the response characteristics of solanum nigrum L. to cadmium stress

Cadmium (Cd) is a nonessential element in plants and has adverse effects on the growth and development of plants. However, the molecular mechanisms of Cd phytotoxicity, tolerance and accumulation in hyperaccumulators Solanum nigrum L. has not been well understood. Here, physiology, transcriptome, and metabolome analyses were conducted to investigate the influence on the S. nigrum under 0, 25, 50, 75 and 100 µM Cd concentrations for 7 days. Pot experiments demonstrated that compared with the control, Cd treatment significantly inhibited the biomass, promoted the Cd accumulation and translocation, and disturbed the balance of mineral nutrient metabolism in S. nigrum, particularly at 100 µM Cd level. Moreover, the photosynthetic pigments contents were severely decreased, while the content of total protein, proline, malondialdehyde (MDA), H2O2, and antioxidant enzyme activities generally increased first and then slightly declined with increasing Cd concentrations, in both leaves and roots. Furthermore, combined with the previous transcriptomic data, numerous crucial coding-genes related to mineral nutrients and Cd ion transport, and the antioxidant enzymes biosynthesis were identified, and their expression pattern was regulated under different Cd stress. Simultaneously, metabolomic analyses revealed that Cd treatment significantly changed the expression level of many metabolites related to amino acid, lipid, carbohydrate, and nucleotide metabolism. Metabolic pathway analysis also showed that S. nigrum roots activated some differentially expressed metabolites (DEMs) involved in energy metabolism, which may enhance the energy supply for detoxification. Importantly, central common metabolism pathways of DEGs and DEMs, including the "TCA cycle", "glutathione metabolic pathway" and "glyoxylate and dicarboxylate metabolism" were screened using conjoint transcriptomics and metabolomics analysis. Our results provide some novel evidences on the physiological and molecular mechanisms of Cd tolerance in hyperaccumulator S. nigrum plants.

Molybdenum-mediated nitrogen accumulation and assimilation in legumes stepwise boosted by the coexistence of arbuscular mycorrhizal fungi and earthworms

Molybdenum (Mo) is a critical micronutrient for nitrogen (N) metabolism in legumes, yet the impact of Mo on legume N metabolism in the context of natural coexistence with soil microorganisms remains poorly understood. This study investigated the dose-dependent effect of Mo on soil N biogeochemical cycling, N accumulation, and assimilation in alfalfa under conditions simulating the coexistence of arbuscular mycorrhizal fungi (AMF) and earthworms. The findings indicated that Mo exerted a hormetic effect on alfalfa N accumulation, facilitating it at low concentrations (below 29.98 mg/kg) and inhibiting it at higher levels. This inhibition was attributed to Mo-induced constraints on C supply for nitrogen fixation. Concurrently, AMF colonization enhanced C assimilation in Mo-treated alfalfas by promoting nutrients uptake, particularly Mg, which is crucial for chlorophyll synthesis. This effect was further amplified by earthworms, which improved AMF colonization (p < 0.05). In the soil N cycle, these organisms exerted opposing effects: AMF enhanced soil nitrification and earthworms reduced soil nitrate (NO3--N) reduction to jointly increase soil phyto-available N content (p < 0.05). Their combined action improved alfalfa N assimilation by restoring the protein synthesis pathway that is compromised by high Mo concentrations, specifically the activity of glutamine synthetase. These findings underscored the potential for soil microorganisms to mitigate N metabolic stress in legumes exposed to elevated Mo levels.

Responses and resistance capacity of Solanum nigrum L. mediated by three ecological category earthworms in metal-[Cd-As-Cu-Pb]-contaminated soils of North China

Earthworms play vital functions affecting plant growth and metal accumulation from downground to aboveground. Soil metal mobilization may be combined with use of earthworm and hyperaccumulator-Solanum nigrum to improve its remediation efficiency. Understanding the effects of specific-species earthworm belonging to different ecological categories on mechanisms underlying of S. nigrum is critical for metal-polluted remediation. However, seldom studies concerned earthworm-assisted phytoremediation of metal contaminated soil in Northern China. This study investigated the effects of earthworm (Eisenia fetida, Amynthas hupeiensis and Drawida gisti) on S. nigrum with exposure to uncontaminated and [Cd-As-Cu-Pb]-contaminated soil (referred to as S0 and S1) for 60 days, respectively. In S1 soil, A. hupeiensis (anecic) had stronger effects on growth and metal accumulation in the organs (root, stem, and leaf) of S. nigrum than D. gisti (endogeic) and E. fetida (epigeic), attributing to their ecological category. The BAF values of S. nigrum were generally ranking in Cd (0.66-5.13) > As (0.03-1.85) > Cu (0.03-0.06) > Pb (0.01-0.05); the BAFCd values were ranking in leaf (2.34-5.13) > root (1.96-4.14) > stem (0.66-1.33); BAFAs, BAFCu, and BAFPb were root (0.04-1.63) > stem (0.01-0.09) ≈ leaf (0.01-0.06). A. hupeiensis decreased the TF values of S. nigrum from the roots to the shoots. Co-effects of metal stress and earthworm activity on metal uptake by shoots suggested that A. hupeiensis increased the uptake of As, Cu, and Pb (by 56.3 %, 51.5 %, and 16.2 %, p < 0.05), but not Cd, which appeared to remain steady for prolonged durations. Alterations in the integrated biomarker response index version 2 (IBRv2) values demonstrated that A. hupeiensis (12.65) improved the resistance capacity (stimulated GSH, SnGS1, and SnCu-SOD) of S. nigrum under metal-containing conditions, compared with E. fetida and D. gisti (IBRv2 were 9.61 and 9.11). This study may provide insights into the patterns of 'soil-earthworm-plant system' on improving remediation efficiency of S. nigrum, from the perspective of earthworm ecological niche partitioning.

The functional division of arbuscular mycorrhizal fungi and earthworm to efficient cooperation on phytoremediation in molybdenum (Mo) contaminated soils

Single phytoremediation has limited capacity to restore soil contaminated with extreme Mo due to its low metal accumulation. Soil organisms can help compensate for this deficiency in Mo-contaminated soils. However, there is limited information available on the integrated roles of different types of soil organisms, particularly the collaboration between soil microorganisms and soil animals, in phytoremediation. The objective of this study is to investigate the effects of a combination of arbuscular mycorrhizal fungi (AMF) and earthworms on the remediation of Mo-contaminated soils by alfalfa (Medicago sativa L.). The results indicated that in the soil-alfalfa system, earthworms effectively drive soil Mo activation, while AMF significantly improve the contribution of the translocation factor to total Mo removal (TMR) in alfalfas (p < 0.05). Meanwhile, compared to individual treatments, the combination of AMF and earthworm enhanced the expression of alfalfa root specific Mo transporter - MOT1 family genes to increase alfalfa uptake Mo (p < 0.05). This alleviated the competition between P/S nutrients and Mo on non-specific Mo transporters-P/S transporters (p < 0.05). Additionally, the proportion of organelle-bound Mo in the root was reduced to decrease Mo toxicity, while the cell wall-bound Mo proportion in the shoot was increased to securely accumulate Mo. The contributions of inoculants to alfalfa TMR followed the order (maximum increases): AMF + E combination (274.68 %) > alone treatments (130 %). Overall, the "functional division and cooperation" between earthworm and AMF are of great importance to the creation of efficient multi-biological systems in phytoremediation.

Synergistic interactions of assorted ameliorating agents to enhance the potential of heavy metal phytoremediation

Pollution by toxic heavy metals creates a significant impact on the biotic community of the ecosystem. Nowadays, a solution to this problem is an eco-friendly approach like phytoremediation, in which plants are used to ameliorate heavy metals. In addition, various amendments are used to enhance the potential of heavy metal phytoremediation. Symbiotic microorganisms such as phosphate-solubilizing bacteria (PSB), endophytes, mycorrhiza and plant growth-promoting rhizobacteria (PGPR) play a significant role in the improvement of heavy metal phytoremediation potential along with promoting the growth of plants that are grown in contaminated environments. Various chemical chelators (Indole 3-acetic acid, ethylene diamine tetra acetic acid, ethylene glycol tetra acetic acid, ethylenediamine-N, N-disuccinic acid and nitrilotri-acetic acid) and their combined action with other agents also contribute to heavy metal phytoremediation enhancement. With modern techniques, transgenic plants and microorganisms are developed to open up an alternative strategy for phytoremediation. Genomics, proteomics, transcriptomics and metabolomics are widely used novel approaches to develop competent phytoremediators. This review accounts for the synergistic interactions of the ameliorating agent's role in enhancing heavy metal phytoremediation, intending to highlight the importance of these various approaches in reducing heavy metal pollution.

Intercropping with Brassica juncea L. enhances maize yield and promotes phytoremediation of cadmium-contaminated soil by changing rhizosphere properties

Intercropping heavy metal hyperaccumulators and low-accumulating cultivars is a promising strategy for remediating contaminated soils without impeding agricultural production. A field plot experiment was conducted to explore the effects of intercropping maize with Brassica juncea L. on the rhizosphere microecological properties, plant growth and cadmium (Cd) accumulation. The results showed that the Cd bioaccumulation amount per unit area (BCAarea) of the intercropping system was 12.9% lower than that of the Brassica juncea L. monoculture but 87.5% higher than that of the maize monoculture. The grain yield of maize was increased by 10.5% through intercropping, and the land equivalent ratio (LER) was greater than 1. Soil available Cd in intercropped maize was 13.4% lower than that in monoculture maize but was 12.7% higher in intercropped Brassica juncea L. than in monoculture Brassica juncea L. Intercropping significantly increased the contents of malic acid and citric acid in the rhizospheres of maize and Brassica juncea L. The dominant microorganisms were similar in all studied soils but were different in relative abundance between the intercropping and monoculture treatments. These findings suggest that intercropping maize with Brassica juncea L. could be a promising approach for phytoremediation without reducing crop yield in Cd-contaminated soil.

Synergistic benefits of Funneliformis mosseae and Bacillus paramycoides: Enhancing soil health and soybean tolerance to root rot disease

To explore the response of soil metabolite composition to soybean disease, the effect of the combined inoculation of arbuscular mycorrhizal fungi (AMF) and plant growth-promoting bacteria on soybean root rot caused by Fusarium oxysporum was studied. A factorial completely randomized design with three factors (AMF, Bacillus. paramycoides, and rot disease stress) was conducted, and eight treatments, including normal groups and stress groups, were performed using pot experiments. GC‒MS and enzymatic assays were used to evaluate the soil factors and soybean growth indicators. The results showed that there were significant differences in the composition of metabolites among the different treatment groups, and 23 metabolites were significantly related to soybean biomass. The combined inoculation of Funneliformis mosseae and Bacillus paramycoides resulted in a significant reduction in harmful soil metabolites associated with root rot disease, such as ethylbenzene and styrene. This reduction in metabolites contributed to improving soil health, as evidenced by enhanced soybean defence enzyme activities and microbial activity, and β-1,3-glucanase, chitinase and phenylalanine ammonia-lyase activities were improved to alleviate plant rhizosphere stress. Furthermore, soybean plants inoculated with the synergistic treatments exhibited reduced root rot disease severity and improved growth indicators compared to control plants. Plant height, root dry weight (RDW), and shoot and root fresh weight (SRFW) were improved by 4.18-53.79%, and the AM fungal colonization rate was also improved under stress. The synergistic application of Funneliformis mosseae and Bacillus paramycoides can effectively enhance soil health by inhibiting the production of harmful soil metabolites and improving soybean tolerance to root rot disease. This approach holds promise for the sustainable management of soil-borne diseases in soybean cultivation.

Diversity of arbuscular mycorrhizal fungi in seleniferous soils and their role in plant growth promotion

The present study aimed to investigate the molecular diversity of arbuscular mycorrhizal fungi (AMF) in natural seleniferous soils and their role in protecting plants from Se toxicity. The genomic DNA extracted from maize roots grown in seleniferous and non-seleniferous regions was amplified using AMF-specific primers by nested PCR. The 1.5 kb amplicon spanning pSSU-ITS-pLSU of 18S rRNA of AMF was deciphered using the Illumina Miseq Next Generation Sequencing (NGS) technique. A total of 17 AMF species from the seleniferous region and 18 AMF species from the non-seleniferous region were identified. The number of reads of Glomus irregularis, G. custos, and G. intraradices was higher in seleniferous soil than in non-seleniferous soil, indicating their tolerance to Se. A consortium of Se-tolerant AMF inoculum was prepared and inoculated to maize plants, grown in natural seleniferous soils. AMF-inoculated plants had healthy growth with higher root, shoot, and grain biomass than non-AMF-inoculated plants. AMF inoculation leads to higher Se accumulation in roots but lesser Se accumulation in shoots and seeds of inoculated maize plants as compared to control plants. Present study results suggest that AMF species from seleniferous soils have the potential to be used as biofertilizers to improve plant growth and tolerate Se toxicity in seleniferous soils.

Identification of cadmium phytoavailability in response to cadmium transformation and changes in soil pH and electrical conductivity

Owing to complex changes in the soil environment, determining cadmium (Cd) phytoavailability is challenging. We devised a soil-wheat system to monitor alterations in soil pH, electrical conductivity (EC), and Cd transformation under various rates of calcium chloride and/or low-molecular-weight organic acids (LMWOAs) addition. The findings indicate that decreasing soil pH value, increasing soil EC value, and Cd transformation affect the phytoextraction of Cd. The exchangeable Cd and transformation of Cd under shifts in soil pH and EC contribute differentially to the phytoextracted Cd. The level of potentially phytoavailable Cd was identified through complete wheat cultivation in which the soil pH decreased by 0.47 unit and soil EC increased by 600-1000 μS cm-1, resembling the concentration of 0.01 M LMWOAs extractable Cd, when transitioning from paddy to dryland soil. Based on considering the phytoextracted Cd as the phytoavailable Cd throughout a complete wheat growth term, the threshold for phytoavailable Cd in soil, ensuring the safety of wheat grain (limit: 0.1 mg kg-1), is determined to be 2.90 μg kg-1. Maintaining control over Cd phytoavailability in soil emerges as the key factor in ensuring the safety of wheat grain cultivation.

Synergistic effects of earthworms and cow manure under reduced chemical fertilization modified microbial community structure to mitigate continuous cropping effects on Chinese flowering cabbage

The substitution of chemical fertilizers with organic fertilizers is a viable strategy to enhance crop yield and soil quality. In this study, the aim was to investigate the changes in soil microorganisms, soil chemical properties, and growth of Chinese flowering cabbage under different fertilization treatments involving earthworms and cow manure. Compared with the control (100% chemical fertilizer), CE (30% reduction in chemical fertilizer + earthworms) and CFE (30% reduction in chemical fertilizer + cow dung + earthworms) treatments at soil pH 8.14 and 8.07, respectively, and CFC (30% reduction in chemical fertilizer + cow manure) and CFE treatments increased soil organic matter (SOM), total nitrogen (TN), available nitrogen (AN), and available potassium (AK) contents. Earthworms and cow manure promoted the abundance of Bacillus and reduced that of the pathogens Plectosphaerella and Gibberella. The mantle test revealed that pH was not correlated with the microbial community. Random forest analysis verified that AN, SOM, and TN were important factors that jointly influenced bacterial and fungal diversity. Overall, the synergistic effect of earthworms and cow manure increased soil fertility and microbial diversity, thereby promoting the growth and development of Chinese flowering cabbage. This study enhanced the understanding of how bioregulation affects the growth and soil quality of Chinese flowering cabbage, and thus provided a guidance for the optimization of fertilization strategies to maximize the yield and quality of Chinese flowering cabbage while reducing environmental risks.

NaCl-mediated strategies for the trade-off between Cd bioconcentration and translocation in Solanum nigrum L

Salt interference significantly affects the behavior of heavy metals in the environment. This study compared and analyzed the response process, migration, and transformation of cadmium (Cd) in the hyperaccumulator Solanum nigrum (S. nigrum) under different NaCl levels to reveal the interference mechanisms of salt in plant remediation of Cd-contaminated soil. The results showed that Cd and salt stress significantly inhibited the growth of plants. The stress effect had more potent growth inhibition at the root than aboveground, thus inducing changes in the spatial configuration of the plants (decreased root-to-aboveground biomass ratio). Salt could activate Cd in plants, enhancing the inhibitory effect on plant growth. Salt increased Cd bioavailability due to the rhizosphere acidification effect, increasing plants' Cd accumulation. The Cd bioconcentration factor in plant roots peaked during the high Cd-high salt treatment (117.10), but the Cd accumulation of plants peaked during the high Cd-low salt treatment (233.04 μg plant-1). Salt additions and increased Cd concentrations enhanced root compartmentalization, inhibiting Cd transport to the aboveground. Changes in Fourier-transform infrared spectroscopy (FTIR) measurements confirmed that the functional groups in plants provided binding sites for Cd. These findings can help guide the phytoremediation of Cd contamination under saline soil conditions.

Increased Tolerance of Massion's pine to Multiple-Toxic-Metal Stress Mediated by Ectomycorrhizal Fungi

Pinus massoniana (Massion's pine), a pioneer tree species, exhibits restoration potential in polluted mining areas. However, the physiological and molecular mechanisms of ectomycorrhizal (ECM) fungi in Massion's pine adaptability to multiple-toxic-metal stress are still unclear. Hence, Massion's pine seedlings inoculated with two strains of C. geophilum, which were screened and isolated from a polluted mine area, were cultivated in mine soil for 90 days to investigate the roles of EMF in mediating toxic metal tolerance in host plants. The results showed that compared with the non-inoculation control, C. geophilum (CG1 and CG2) significantly promoted the biomass, root morphology, element absorption, photosynthetic characteristics, antioxidant enzyme activities (CAT, POD, and SOD), and proline content of Massion's pine seedlings in mine soil. C. geophilum increased the concentrations of Cr, Cd, Pb, and Mn in the roots of Massion's pine seedlings, with CG1 significantly increasing the concentrations of Pb and Mn by 246% and 162% and CG2 significantly increasing the concentrations of Cr and Pb by 102% and 78%. In contrast, C. geophilum reduced the concentrations of Cr, Cd, Pb, and Mn in the shoots by 14%, 33%, 27%, and 14% on average, respectively. In addition, C. geophilum significantly reduced the transfer factor (TF) of Cr, Cd, Pb, and Mn by 32-58%, 17-26%, 68-75%, and 18-64%, respectively, and the bio-concentration factor (BF) of Cd by 39-71%. Comparative transcriptomic analysis demonstrated that the differently expressed genes (DEGs) were mainly encoding functions involved in "transmembrane transport", "ion transport", "oxidation reduction process", "oxidative phosphorylation", "carbon metabolism", "glycolysis/gluconeogenesis", "photosynthesis", and "biosynthesis of amino acids." These results indicate that C. geophilum is able to mitigate toxic metals stress by promoting nutrient uptake, photosynthesis, and plant growth, thereby modulating the antioxidant system to reduce oxidative stress and reducing the transport and enrichment of toxic metals from the root to the shoot of Massion's pine seedlings.

Microorganisms and Biochar Improve the Remediation Efficiency of Paspalum vaginatum and Pennisetum alopecuroides on Cadmium-Contaminated Soil

Phytoremediation can help remediate potential toxic elements (PTE) in soil. Microorganisms and soil amendments are effective means to improve the efficiency of phytoremediation. This study selected three microorganisms that may promote phytoremediation, including bacteria (Ceratobasidium), fungi (Pseudomonas mendocina), and arbuscular-mycorrhizal fungi (AMF, Funneliformis caledonium). The effects of single or mixed inoculation of three microorganisms on the phytoremediation efficiency of Paspalum vaginatum and Pennisetum alopecuroides were tested under three different degrees of cadmium-contaminated soil (low 10 mg/kg, medium 50 mg/kg, and high 100 mg/kg). The results showed that single inoculation of AMF or Pseudomonas mendocina could significantly increase the biomass of two plants under three different degrees of cadmium-contaminated soil, and the growth-promoting effect of AMF was better than Pseudomonas mendocina. However, simultaneous inoculation of these two microorganisms did not show a better effect than the inoculation of one. Inoculation of Ceratobasidium reduced the biomass of the two plants under high concentrations of cadmium-contaminated soil. Among all treatments, the remediation ability of the two plants was the strongest when inoculated with AMF alone. On this basis, this study explored the effect of AMF combined with corn-straw-biochar on the phytoremediation efficiency of Paspalum vaginatum and Pennisetum alopecuroides. The results showed that biochar could affect plant biomass and Cd concentration in plants by reducing Cd concentration in soil. The combined use of biochar and AMF increased the biomass of Paspalum vaginatum by 8.9-48.6% and the biomass of Pennisetum alopecuroides by 8.04-32.92%. Compared with the single use of AMF or biochar, the combination of the two is better, which greatly improves the efficiency of phytoremediation.

Synergistic Effects of Earthworms and Plants on Chromium Removal from Acidic and Alkaline Soils: Biological Responses and Implications

Soil heavy metal pollution has become one of the major environmental issues of global concern and solving this problem is a major scientific and technological need for today's socio-economic development. Environmentally friendly bioremediation methods are currently the most commonly used for soil heavy metal pollution remediation. Via controlled experiments, the removal characteristics of chromium from contaminated soil were studied using earthworms (Eisenia fetida and Pheretima guillelmi) and plants (ryegrass and maize) at different chromium concentrations (15 mg/kg and 50 mg/kg) in acidic and alkaline soils. The effects of chromium contamination on biomass, chromium bioaccumulation, and earthworm gut microbial communities were also analyzed. The results showed that E. fetida had a relatively stronger ability to remove chromium from acidic and alkaline soil than P. guillelmi, and ryegrass had a significantly better ability to remove chromium from acidic and alkaline soil than maize. The combined use of E. fetida and ryegrass showed the best effect of removing chromium from contaminated soils, wih the highest removal rate (63.23%) in acidic soil at low Cr concentrations. After soil ingestion by earthworms, the content of stable chromium (residual and oxidizable forms) in the soil decreased significantly, while the content of active chromium (acid-extractable and reducible forms) increased significantly, thus promoting the enrichment of chromium in plants. The diversity in gut bacterial communities in earthworms decreased significantly following the ingestion of chromium-polluted soil, and their composition differences were significantly correlated with soil acidity and alkalinity. Bacillales, Chryseobacterium, and Citrobacter may have strong abilities to resist chromium and enhance chromium activity in acidic and alkaline soils. There was also a significant correlation between changes in enzyme activity in earthworms and their gut bacterial communities. The bacterial communities, including Pseudomonas and Verminephrobacter, were closely related to the bioavailability of chromium in soil and the degree of chromium stress in earthworms. This study provides insights into the differences in bioremediation for chromium-contaminated soils with different properties and its biological responses.

Variance of soil bacterial community and metabolic profile in the rhizosphere vs. non-rhizosphere of native plant Rumex acetosa L. from a Sb/As co-contaminated area in China

Heavy metals (HMs) contamination poses a serious threat to soil health. However, the rhizosphere effect of native pioneer plants on the soil ecosystem remains unclear. Herein, how the rhizosphere (Rumex acetosa L.) influenced the process of HMs threatening soil micro-ecology was investigated by coupling various fractions of HMs, soil microorganisms and soil metabolism. The rhizosphere effect alleviated the HMs' stress by absorbing and reducing HMs' direct bioavailability, and the accumulation of ammonium nitrogen increased in the rhizosphere soil. Meanwhile, severe HMs contamination covered the rhizosphere effect on the richness, diversity, structure and predicted function pathways of soil bacterial community, but the relative abundance of Gemmatimonadota decreased and Verrucomicrobiota increased. The content of total HMs and physicochemical properties played a more important role than rhizosphere effect in shaping soil bacterial community. Furthermore, As was observed to have a more significant impact compared to Sb. Moreover, plant roots improved the stability of bacterial co-occurrence network, and significantly changed the critical genera. The process influenced bacterial life activity and nutrient cycling in soil, and the conclusion was further supported by the significant difference in metabolic profiles. This study illustrated that in Sb/As co-contaminated area, rhizosphere effect significantly changed soil HMs content and fraction, soil properties, and microbial community and metabolic profiles.

AMF Inoculation Alleviates Molybdenum Toxicity to Maize by Protecting Leaf Performance

The use of arbuscular mycorrhizal fungi (AMF) is a vital strategy for enhancing the phytoremediation of heavy metals. However, the role of AMF under molybdenum (Mo) stress is elusive. A pot culture experiment was conducted to explore the effects of AMF (Claroideoglomus etunicatum and Rhizophagus intraradices) inoculation on the uptake and transport of Mo and the physiological growth of maize plants under different levels of Mo addition (0, 100, 1000, and 2000 mg/kg). AMF inoculation significantly increased the biomass of maize plants, and the mycorrhizal dependency reached 222% at the Mo addition level of 1000 mg/kg. Additionally, AMF inoculation could induce different growth allocation strategies in response to Mo stress. Inoculation significantly reduced Mo transport, and the active accumulation of Mo in the roots reached 80% after inoculation at the high Mo concentration of 2000 mg/kg. In addition to enhancing the net photosynthetic and pigment content, inoculation also increased the biomass by enhancing the uptake of nutrients, including P, K, Zn, and Cu, to resist Mo stress. In conclusion, C. etunicatum and R. intraradices were tolerant to the Mo stress and could alleviate the Mo-induced phytotoxicity by regulating the allocation of Mo in plants and improving photosynthetic leaf pigment contents and the uptake of nutrition. Compared with C. etunicatum, R. intraradices showed a stronger tolerance to Mo, which was manifested by a stronger inhibition of Mo transport and a higher uptake of nutrient elements. Accordingly, AMF show potential for the bioremediation of Mo-polluted soil.

Effects of microbial agents on cadmium uptake in Solanum nigrum L. and rhizosphere microbial communities in cadmium-contaminated soil

Solanum nigrum L. (S. nigrum) and microbial agents are often used for the remediation of cadmium (Cd)-contaminated soil; however, no studies to date have examined the efficacy of using various microbial agents for enhancing the remediation efficiency of Cd-contaminated soil by S. nigrum. Here, we conducted greenhouse pot experiments to evaluate the efficacy of applying Bacillus megaterium (BM) along with citric acid (BM + CA), Glomus mosseae (BM + GM), and Piriformospora indica (BM + PI) on the ability of S. nigrum to remediate Cd-contaminated soil. The results showed that BM + GM significantly increased the Cd accumulation of each pot of S. nigrum by 104% compared with the control. Application of microbial agents changed the soil microbial communities. Redundancy analysis showed that the activities of Catalase (CAT) and urease (UE), soil organic matter, available N and total Cd were the main influencing factors. By constructing the microbial co-occurrence networks, the soil microbe was divided into four main Modules. BM + GM and BM + PI significantly increased the relative abundance of Module#1 and Module#3, respectively, when compared with the control. Additionally, Module#1 showed a significant positive correlation with translocation factor (TF), which could be regarded as the key microbial taxa. Further research found that Ascomycota, Glomeromycota, Proteobacteria, and Actinobacteria within Module#1 were also significantly correlated with TF, and these key species enriched in BM + GM. Overall, our findings indicate that the BM + GM treatment was the most effective for the remediation of Cd pollution. This treatment method may further affect the rhizosphere microbial community by affecting soil indicators, which might drive the formation of Module#1, thus greatly enhancing the Cd remediation capacity of S. nigrum.

Effect of Arbuscular Mycorrhiza Fungus Diversispora eburnea Inoculation on Lolium perenne and Amorpha fruticosa Growth, Cadmium Uptake, and Soil Cadmium Speciation in Cadmium-Contaminated Soil

Cadmium (Cd) pollution has become aggravated during the past decades of industrialization, severely endangering human health through its entry into the food chain. While it is well understood that arbuscular mycorrhizal fungi (AMF) have a strong ability to regulate plant growth and Cd uptake, studies investigating how they affect soil Cd speciation and influence Cd uptake are limited. We designed a pot experiment comprising two AMF-inoculant groups (inoculation with Diversispora eburnea or no inoculation), three Cd concentration levels (0, 5, and 15 mg/kg), and two plant species (Lolium perenne and Amorpha fruticosa) to study the effect of AMF Diversispora eburnea on plant growth, Cd uptake, and Cd speciation in the soil. The results revealed that L. perenne exhibited higher productivity and greater Cd uptake than A. fruticosa, regardless of AMF D. eburnea inoculation. However, AMF D. eburnea significantly altered soil Cd speciation by increasing the proportion of exchangeable Cd and decreasing residual Cd, resulting in Cd enrichment in the plant root organs and the elimination of Cd from the polluted soils. Our experiments demonstrate that inoculating plants with AMF D. eburnea is an effective alternative strategy for remediating Cd-contaminated soil.

Influence of arbuscular mycorrhizal fungi on bioaccumulation and bioavailability of As and Cd: A meta-analysis

Increasing industrial activity has led to a growing risk of arsenic (As) and cadmium (Cd) accumulations and biomagnifications in plants and humans. Arbuscular mycorrhizal fungi (AMF) have been extensively studied as a soil amendment owing to their capability to reduce the accumulation of As and Cd in plant tissues. However, a quantitative and data-based consensus has yet to be reached on the effect of AMF on As and Cd bioaccumulation and bioavailability. Here, a meta-analysis was conducted to quantitatively evaluate the impact of AMF using 1430 individual observations from 194 articles. The results showed that AMF inoculation caused a decrease in shoot and root As and Cd accumulation compared to control, and the reduction rates were affected by experimental duration, P fertilizer, AMF species, plant family, plant lifecycle, and soil properties. Intermediate experimental duration (lasting 56-112 days) and no P fertilizer favored AMF to reduce the shoot As and root Cd accumulation. Compared to other plant families, the reduction in As and Cd accumulation in legumes was the greatest, following AMF inoculation. The soils with alkaline, high organic carbon (OC), and low available phosphorus (AP) appeared to be more favorable for AMF to reduce As accumulation in plant tissues, while soils with low AP were more conducive to reducing the Cd accumulation in plant tissues. In addition, AMF inoculation increased pH (1.92%), OC (6.27%), easily-extractable glomalin-related soil protein (EE-GRSP) (29.36%), and total glomalin-related soil protein (T-GRSP) (29.99%), and reduced bioavailable As (0.52%) and Cd (2.35%) in soils compared to control. Overall, the meta-analysis provides valuable guidelines for the optimal use of AMF in different plant-soil systems.

Dual RNA and 16S ribosomal DNA sequencing reveal arbuscular mycorrhizal fungi-mediated mitigation of selenate stress in Zea mays L. and reshaping of soil microbiota

Excessively high concentrations of selenium (Se) in soil are toxic to crop plants, and inoculation with arbuscular mycorrhizal fungi (AMF) can reverse Se stress in maize (Zea mays L.). To investigate the underlying mechanisms, maize seedlings were treated with sodium selenate (5 mg Se[VI] kg^-1) and/or AMF (Funneliformis mosseae and Claroideoglomus etunicatum). Dual RNA sequencing in mycorrhiza and 16 S ribosomal DNA sequencing in soil were performed. The results showed that Se(VI) application alone decreased plant dry weight, but increased plant Se concentration, total Se content (mainly selenocysteine), and root superoxide content. Inoculation with either F. mosseae or C. etunicatum increased plant dry weight, decreased Se accumulation and selenocysteine proportion, enhanced root peroxidase activity, and alleviated oxidative stress in Se(VI)-treated plants. Inoculation also downregulated the expression of genes encoding Se transporters, assimilation enzymes, and cysteine-rich receptor-like kinases in Se(VI)-stressed plants, similar to plant-pathogen interaction and glutathione metabolism related genes. Conversely, genes encoding selenium-binding proteins and those related to phenylpropanoid biosynthesis were upregulated in inoculated plants under Se(VI) stress. Compared with Se(VI)-free plants, Se tolerance index, symbiotic feedback percentage on plant dry weight, and root colonization rate were all increased in inoculated plants under Se(VI) stress, corresponding to upregulated expression of 'key genes' in symbiosis. AMF inoculation increased bacterial diversity, decreased the relative abundances of selenobacteria related to plant Se absorption (e.g., Proteobacteria and Firmicutes), and improved bacterial network complexity in Se(VI)-stressed soils. We suggest that stress-mediated enhancement of mycorrhizal symbiosis contributed to plant Se(VI) tolerance, whereas AMF-mediated reshaping of soil bacterial community structure prevented excessive Se accumulation in maize.

A fungus (Trametes pubescens) resists cadmium toxicity by rewiring nitrogen metabolism and enhancing energy metabolism

As a primary goal, cadmium (Cd) is a heavy metal pollutant that is readily adsorbed and retained in rice, and it becomes a serious threat to food safety and human health. Fungi have attracted interest for their ability to remove heavy metals from the environment, although the underlying mechanisms of how fungi defend against Cd toxicity are still unclear. In this study, a Cd-resistant fungus Trametes pubescens (T. pubescens) was investigated. Pot experiments of rice seedlings colonized with T. pubescens showed that their coculture could significantly enhance rice seedling growth and reduce Cd accumulation in rice tissues. Furthermore, integrated transcriptomic and metabolomic analyses were used to explore how T. pubescens would reprogram its metabolic network against reactive oxygen species (ROS) caused by Cd toxicity. Based on multi-omic data mining results, we postulated that under Cd stress, T. pubescens was able to upregulate both the mitogen-activated protein kinase (MAPK) and phosphatidylinositol signaling pathways, which enhanced the nitrogen flow from amino acids metabolism through glutaminolysis to α-ketoglutarate (α-KG), one of the entering points of tricarboxylic acid (TCA) cycle within mitochondria; it thus increased the production of energy equivalents, adenosine triphosphate (ATP) and reduced nicotinamide adenine dinucleotide phosphate (NADPH) for T. pubescens to resist oxidative damage. This study can enable a better understanding of the metabolic rewiring of T. pubescens under Cd stress, and it can also provide a promising potential to prevent the rice paddy fields from Cd toxicity and enhance food safety.

The mechanism of arbuscular mycorrhizal enhancing cadmium uptake in Phragmites australis depends on the phosphorus concentration

Arbuscular mycorrhizal fungi (AMF) is a vital strategy to enhance the phytoremediation of cadmium (Cd) pollution. However, the function of AMF was influenced by phosphorus (P) concentration. To reveal the effect of AMF on the Cd accumulation of host plants under different P concentrations and how the AMF and P interact, this study comparatively analyzed the regulatory effects of AMF on the Cd response, extraction, and transportation processes of Phragmites australis (P. australis) under different P levels, and explored its physiological, biochemical and molecular biological mechanisms. The study showed that AMF could induce different growth allocation strategies in response to Cd stress. Moreover, AMF promoted plant Cd tolerance and detoxification by enhancing P uptake, Cd passivation, Cd retention in the cell wall, and functional group modulation. Under P starvation treatments, AMF promoted Cd uptake by inducing Cd to enter the iron pathway, increased the transport coefficient by 493.39%, and retained Cd in stems. However, these effects disappeared following the addition of P. Additionally, AMF up-regulated the expression of ZIP, ZIP, and NRAMP genes to promote cadmium uptake at low, medium, and high phosphorus levels, respectively. Thus, the Cd response mechanism of the AMF-P. australis symbiotic system was P dose-dependent.

Effects of Claroideoglomus etunicatum Fungi Inoculation on Arsenic Uptake by Maize and Pteris vittata L

The intercropping of arsenic (As) hyperaccumulator Chinese brake fern (Pterisvittata L.) with maize (Zea mays L.) is being widely utilized to enhance phytoremediation without impeding agricultural production. Arbuscular mycorrhizal (AM) fungi can regulate the physiological and molecular responses of plants in tolerating heavy metal stress. We studied the effects of inoculation with AM fungi on As uptake by maize and P. vittata grown in soil contaminated with As. The results show that infection with the fungus Claroideoglomus etunicatum (Ce) increased the biomass of maize and P. vittata. Moreover, infection with Ce significantly reduced the accumulation of As and the coefficient for root-shoot transport of As in maize, whereas it enhanced the accumulation of As and coefficient for root-shoot transport of As in P. vittata. Infection with Ce led to a high content of available As in the soil planted with P. vittata, while there was a lower content of available As in the soil planted with maize. The different concentrations of available As in the soils suggest that inoculation with Ce may enhance the secretion of organic acids, particularly citric acid and tartaric acid, by maize roots and promote rhizosphere acidification, which then causes a decrease in As uptake by maize. Inoculation with Ce decreased the secretion of citric acid from P. vittata and promoted rhizosphere alkalization, which then caused an increase in As uptake by P. vittata and maize. Thus, co-combining AM fungi in the intercropping of the hyperaccumulator P. vittata with maize could be a promising approach to improving the efficiency of remediating As-contaminated soil.

How a functional soil animal-earthworm affect arbuscular mycorrhizae-assisted phytoremediation in metals contaminated soil?

Phytoremediation is a promising and sustainable technology to remediate the risk of heavy metals (HMs) contaminated soils, however, this way is limited to some factors contributing to slow plant growth and low remediation efficiency. As soil beneficial microbe, arbuscular mycorrhizal fungi (AMF) assisted phytoremediation is an environment-friendly and high-efficiency bioremediation technology. However, AMF-symbiotic formation and their functional expression responsible for HMs-polluted remediation are significantly influenced by edaphic fauna. Earthworms as common soil fauna, may have various effects on formation of AMF symbiosis, and exhibit synergy with AMF for the combined remediation of HMs-contaminated soils. For now, AMF-assisted phytoremediation incorporating earthworm coexistence is scarcely reported. Therefore, the main focus of this review is to discuss the AMF effects under earthworm coexistence. Effects of AMF-symbiotic formation influenced by earthworms are fully reviewed. Moreover, underlying mechanisms and synergy of the two in HMs remediation, soil improvement, and plant growth were comprehensively elucidated. Phenomenon of "functional synergism" between earthworms and AMF may be a significant mechanism for HMs phytoremediation. Finally, this review analyses shortcomings and prescriptions in the practical application of the technology and provides new insights into AMF- earthworms synergistic remediation of HMs-contaminated soils.

Thinking for the future: Phytoextraction of cadmium using primed plants for sustainable soil clean-up

Cadmium (Cd) soil contamination is a global problem for food security due to its ubiquity, toxicity at low levels, persistence, and bioaccumulation in living organisms. Humans' intake of heavy metals is usually due to direct contact with contaminated soil, through the food chain (Cd accumulation in crops and edible plants) or through drinking water in cases of coupled groundwater-surface water systems. Phytoextraction is one of the eco-friendly, sustainable solutions that can be used as a method for soil clean-up with the possibility of re-use of extracted metals through phytomining. Phytoextraction is often limited by the tolerance level of hyperaccumulating plants and the restriction of their growth. Mechanisms of hyperaccumulation of heavy metals in tolerant species have been studied, but there are almost no data on mechanisms of further improvement of the accumulation capacity of such plants. Priming can influence plant stress tolerance by the initiation of mild stress cues resulting in acclimation of the plant. The potential of plant priming in abiotic stress tolerance has been extensively investigated using different types of molecules that are supplemented exogenously to plant organs (roots, leaves, etc.), resulting in enhanced tolerance of abiotic stress. This review focuses on mechanisms of enhancement of plant stress tolerance in hyperaccumulating plants for their exploitation in phytoextraction processes.

Biochar Alleviates Phytotoxicity by Minimizing Bioavailability and Oxidative Stress in Foxtail Millet (Setaria italica L.) Cultivated in Cd- and Zn-Contaminated Soil

Soil contamination with multiple heavy metals is a global environmental issue that poses a serious threat to public health and ecological safety. Biochar passivation is an efficient and economical technology to prevent heavy metal contamination of Cd; however, its effects on compound-contaminated and weakly alkaline soil remain unclear. Further, the mechanisms mediating the immobilization effects of biochar have not been evaluated. In this study, three biochar treated at different pyrolytic temperatures [300°C (BC300), 400°C (BC400), and 500°C (BC500)] were applied to Cd-/Zn-contaminated soils, and their effects on plant growth, photosynthetic characteristics, Cd/Zn accumulation and distribution in foxtail millet were evaluated. Further, the effect of biochar application on the soil physicochemical characteristics, as well as the diversity and composition of the soil microbiota were investigated. Biochar significantly alleviated the phytotoxicity of Cd and Zn. DTPA (diethylenetriamine pentaacetic acid)-Cd and DTPA-Zn content was significantly reduced following biochar treatment via the transformation of exchangeable components to stable forms. BC500 had a lower DTPA-Cd content than BC300 and BC400 by 42.87% and 39.29%, respectively. The BC500 passivation ratio of Cd was significantly higher than that of Zn. Biochar application also promoted the growth of foxtail millet, alleviated oxidative stress, and reduced heavy metal bioaccumulation in shoots, and transport of Cd from the roots to the shoots in the foxtail millet. The plant height, stem diameter, biomass, and photosynthetic rates of the foxtail millet were the highest in BC500, whereas the Cd and Zn content in each organ and malondialdehyde and hydrogen peroxide content in the leaves were the lowest. Moreover, biochar application significantly increased the abundance of soil bacteria and fungi, as well as increasing the fungal species richness compared to no-biochar treatment. Overall, biochar was an effective agent for the remediation of heavy metal-contaminated soil. The passivation effect of biochar exerted on heavy metals in soil was affected by the biochar pyrolysis temperature, with BC500 showing the best passivation effect.

Plant-Mycorrhizal Fungi Interactions in Phytoremediation of Geogenic Contaminated Soils

Soil contamination by geogenic contaminants (GCs) represents an imperative environmental problem. Various soil remediation methods have been successfully employed to ameliorate the health risks associated with GCs. Phytoremediation is considered as an eco-friendly and economical approach to revegetate GC-contaminated soils. However, it is a very slow process, as plants take a considerable amount of time to gain biomass. Also, the process is limited only to the depth and surface area of the root. Inoculation of arbuscular mycorrhizal fungi (AMF) with remediating plants has been found to accelerate the phytoremediation process by enhancing plant biomass and their metal accumulation potential while improving the soil physicochemical and biological characteristics. Progress in the field application is hindered by a lack of understanding of complex interactions between host plant and AMF that contribute to metal detoxification/(im)mobilization/accumulation/translocation. Thus, this review is an attempt to reveal the underlying mechanisms of plant-AMF interactions in phytoremediation.

Cadmium transfer between maize and soybean plants via common mycorrhizal networks

More than 80% terrestrial plants establish mutualistic symbiosis with soil-borne arbuscular mycorrhizal fungi (AMF). These fungi not only significantly improve plant nutrient acquisition and stress resistance, but also mitigate heavy metal phytotoxicity, Furthermore, the extraradical mycorrhizal mycelia can form common mycorrhizal networks (CMNs) that link roots of multiple plants in a community. Here we show that the networks mediate migration of heavy metal cadmium (Cd) from maize (Zea mays L.) to soybean (Glycine max (Linn.) Merr.) plants. CMNs between maize and soybean plants were established after inoculation of maize plants with AMF Funneliformis mosseae. Application of CdCl2 in maize plants led to 64.4% increase in the shoots and 48.2% increase in the roots in Cd content in CMNs-connected soybean plants compared to the control without Cd treatment in maize. Meanwhile, although the CMNs-connected soybean plants did not directly receive Cd supply, they upregulated transcriptional levels of Cd transport-related genes HATPase and RSTK 2.13- and 5.96-fold, respectively, induced activities of POD by 44.8% in the leaves, and increased MDA by 146.2% in the roots. Furthermore, Cd addition inhibited maize growth but mycorrhizal colonization improved plant performance in presence of Cd stress. This finding demonstrates that mycorrhizal networks mediate the transfer of Cd between plants of different species, suggesting a potential to use CMNs as a conduit to transfer toxic heavy metals from main food crops to heavy metal hyperaccumulators via intercropping.

Effects of magnetically treated Sedum alfredii seeds on the dissolved organic matter characteristics of Cd-contaminated soil during phytoextraction

The effects of magnetic field treatments on the two determining factors of phytoremediation, growth status and element uptake capacity, of Sedum alfredii Hance. have been thoroughly studied; however, minimal studies have been performed to determine the influence of the Cd hyperaccumulator S. alfredii, grown from magnetically treated seeds, on the dissolved organic matter (DOM) characteristics in its rhizosphere. A series of pot experiments were conducted to evaluate the variations in the DOM concentration and fractionations in the rhizosphere of S. alfredii treated with external magnetic fields. Compared with the untreated seeds, S. alfredii grown from magnetically treated seeds excreted more DOM in its rhizosphere. Additionally, the hydrophilic DOM fractionation proportion, which presented a greater capacity to mobilize Cd in the soil, increased from 42.7 % in the control sample to 47.2 % in the 150 mT magnetically treated S. alfredii sample. The water-soluble and exchangeable forms of Cd in the rhizosphere of the magnetically treated S. alfredii were significantly lower than those of the control sample. Furthermore, the Cd extraction capacity of DOM from the rhizosphere of the magnetically treated S. alfredii was greater than that of the control sample, thereby increasing the Cd uptake ability of the magnetically treated species. This study proves that a suitable magnetic field treatment can enhance the phytoremediation effect of S. alfredii, and reveals the mechanism of the phenomenon from the perspective of changes in soil DOM.

Potential use of arbuscular mycorrhizal fungi for simultaneous mitigation of arsenic and cadmium accumulation in rice

Rice polluted by metal(loid)s, especially arsenic (As) and cadmium (Cd), imposes serious health risks. Numerous studies have demonstrated that the obligate plant symbionts arbuscular mycorrhizal fungi (AMF) can reduce As and Cd concentrations in rice. The behaviours of metal(loid)s in the soil-rice-AMF system are of significant interest for scientists in the fields of plant biology, microbiology, agriculture, and environmental science. We review the mechanisms of As and Cd accumulation in rice with and without the involvement of AMF. In the context of the soil-rice-AMF system, we assess and discuss the role of AMF in affecting soil ion mobility, chemical forms, transport pathways (including the symplast and apoplast), and genotype variation. A potential strategy for AMF application in rice fields is considered, followed by future research directions to improve theoretical understanding and encourage field application.

Earthworms as candidates for remediation of potentially toxic elements contaminated soils and mitigating the environmental and human health risks: A review

Global concerns towards potentially toxic elements (PTEs) are steadily increasing due to the significant threats that PTEs pose to human health and environmental quality. This calls for immediate, effective and efficient remediation solutions. Earthworms, the 'ecosystem engineers', can modify and improve soil health and enhance plant productivity. Recently, considerable attention has been paid to the potential of earthworms, alone or combined with other soil organisms and/or soil amendments, to remediate PTEs contaminated soils. However, the use of earthworms in the remediation of PTEs contaminated soil (i.e., vermiremediation) has not been thoroughly reviewed to date. Therefore, this review discusses and provides comprehensive insights into the suitability of earthworms as potential candidates for bioremediation of PTEs contaminated soils and mitigating environmental and human health risks. Specifically, we reviewed and discussed: i) the occurrence and abundance of earthworms in PTEs contaminated soils; ii) the influence of PTEs on earthworm communities in contaminated soils; iii) factors affecting earthworm PTEs accumulation and elimination, and iv) the dynamics and fate of PTEs in earthworm amended soils. The technical feasibility, knowledge gaps, and practical challenges have been worked out and critically discussed. Therefore, this review could provide a reference and guidance for bio-restoration of PTEs contaminated soils and shall also help developing innovative and applicable solutions for controlling PTEs bioavailability for the remediation of contaminated soils and the mitigation of the environment and human risks.

Effects of earthworms and arbuscular mycorrhizal fungi on improvement of fertility and microbial communities of soils heavily polluted by cadmium

Soil bacterial community (SBC) and fertility are pivotal for the evaluation of phytoremediation performance. Although affected by earthworms (E) and arbuscular mycorrhizal fungi (AMF), little is known about the impacts of the E-AMF interaction on the variation of SBC and fertility in cadmium (Cd)-spiked soil. We elucidated these impacts in rhizosphere soil of Solanum nigrum L. Loss of nutrient availability, and SBC diversity was observed in Cd-polluted soil. AMF increased available phosphorous (AP), whereas E increased available potassium (AK). In soils with 60 and 120 mg/kg Cd, the contents of AK, AP, and soil organic matter (SOM) increased by 7.0-19.7%, 23.7-25.5%, and 11.5-17.4%, respectively; and the residual Cd after remediation decreased by 7.9-8.5% in soils treated with EAM compared to untreated soil. EAM-treated soil had higher alpha diversity estimators compared to uninoculated soil. The predominant bacterial phyla were Proteobacteria and Bacteroidetes, accounting for 72.5-84.0%. Redundancy analysis showed that total carbon (TC), SOM, pH, and C/N ratio were key factors determining SBC at the phylum level, explaining 26.9, 24.1, 15.1, and 14.8% of the total variance, respectively. These results suggested that EAM affected SBC composition by altering SOM, TC, and C/N ratio. The E-AMF cooperation ameliorates soil nutrients, SBC diversity, and composition, facilitating phytoextraction processes.

Citric acid and AMF inoculation combination-assisted phytoextraction of vanadium (V) by Medicago sativa in V mining contaminated soil

The use of citric acid (CA) chelator to facilitate metal bioavailability is a promising approach for the phytoextraction of heavy metal contaminants. However, the role of the CA chelator associated with arbuscular mycorrhizal fungi (AMF) inoculation on phytoextraction of vanadium (V) has not been studied. Therefore, in this study, a greenhouse pot experiment was conducted to evaluate the combined effect of CA chelator and AMF inoculation on growth performance and V phytoextraction of plants in V-contaminated soil. The experiment was performed via CA (at 0, 5, and 10 mM kg^-1 soil levels) application alone or in combination with AMF inoculation by Medicago sativa Linn. (M. sativa). Plant biomass, root mycorrhizal colonization, P and V accumulation, antioxidant enzyme activity in plants, and soil chemical speciation of V were evaluated. Results depicted (1) a marked decline in plant biomass and root mycorrhizal colonization in 5- and 10-mM CA treatments which were accompanied by a significant increased V accumulation in plant tissues. The effects could be attributed to the enhanced acid-soluble V fraction transferring from the reducible fraction. (2) The presence of CA significantly enhanced P acquisition while the P/V concentration ratio in plant shoots and roots decreased, owing to the increased V translocation from soil to plant. (3) In both CA-treated soil, AMF-plant symbiosis significantly improved dry weight (31.4-73.3%) and P content (37.3-122.5%) in shoots and roots of M. sativa. The combined treatments also showed markedly contribution in reduction of malondialdehyde (MDA) content (12.8-16.2%) and higher antioxidants (SOD, POD, and CAT) activities in the leaves. This suggests their combination could promote growth performance and stimulate antioxidant response to alleviate V stress induced by CA chelator. (4) Taken together, 10 mM kg^-1 CA application and AMF inoculation combination exhibited a higher amount of extracted V both in plant shoots and roots. Thus, citric acid-AMF-plant symbiosis provides a novel remediation strategy for in situ V phytoextraction by M. sativa in V-contaminated soil.

Arbuscular mycorrhizal fungi reverse selenium stress in Zea mays seedlings by improving plant and soil characteristics

Selenium (Se) is a beneficial trace element for certain animals including humans, while remaining controversial for plants. High Se concentration in soil is toxic to plants especially at seedling stage of the plants. Although, arbuscular mycorrhizal fungi (AMF) are important for plant stress resistance; but the mechanisms by which AMF alleviate Se stress in crop seedlings are unclear. Therefore, we investigated the potential strategies of AMF symbiosis to alleviate Se stress in maize (Zea mays) from plants and soil perspectives. Results showed that Se stress (Se application level > 5 mg kg-1) significantly inhibited leaf area, shoot dry weight, and root dry weight of maize (P < 0.05). In contrast, AM symbiosis significantly improved root morphology, increased nitrogen and phosphorus nutrition, promoted shoot growth, inhibited the transport of Se from soil/roots to shoots, and then diluted the concentration of Se in shoots (32.65-52.80%). In general, the response of maize growth to AMF was mainly observed in shoots rather than roots. In addition, AMF inoculation significantly increased the easily extractable glomalin-related soil protein and organic matter contents and decreased the availability of soil Se to the plant. Principal component analysis showed that AMF promoted growth and nutrition uptake of maize was the most dominant effect of Se stress alleviation, followed by the decrease of soil Se availability, limiting Se transport from soil/roots to shoots. Moreover, the expression of Se uptake-related ion transporter genes (ZmPht2, ZmNIP2;1, and ZmSultr1;3) in maize roots were down-regulated upon AM symbiosis which resultantly inhibited the uptake and transport of Se from soil to maize roots. Thus, AMF could impede Se stress in maize seedlings by improving plant and soil characteristics.

Remediation of copper-contaminated soils using Tagetes patula L., earthworms and arbuscular mycorrhizal fungi

Arbuscular mycorrhizal fungi (AMF) and earthworms have potential uses in the bioremediation of contaminated soils. In recent years, heavy metal-contaminated sites have been remediated by adding plants and AMF or earthworms to the soil. However, there are few studies on remediation using combinations of plants, animals, and microbes, especially for the remediation of Cu-contaminated soil. The present study investigated the separate and combined effects of AMF and earthworms on Cu-contaminated soil in which Tagetes patula L. was grown. The results show that the combined application of AMF and earthworms markedly increased the biomass of plant shoots and roots by more than 100%. It also increased Cu extraction by T. patula by 270%. The combined treatment was effective in increasing the CEC, contents of OM, and available Cu, P and K, but reduced the soil pH. Furthermore, the combined treatment significantly increased the abundance and diversity of the soil microbial community. In particular, the abundances of the bacteria Bacteroides, Proteobacteria, and Actinobacteria were increased, with the genera Flavobacterium, Pedobacter, Algoriphagus, Gaetbulibacter, Pseudomonas, Luteimonas, and Arthrobacter dominating. Meanwhile, the abundance of the fungus Zygomycota was increased, with Mortierella dominating. Moreover, inoculation with earthworms greatly improved the structure of the soil microbial community.

The Road to Practical Application of Cadmium Phytoremediation Using Rice

Cadmium (Cd) is a toxic heavy metal that causes severe health issues in humans. Cd accumulates in the human body when foods produced in Cd-contaminated fields are eaten. Therefore, soil remediation of contaminated fields is necessary to provide safe foods. Rice is one of the primary candidates for phytoremediation. There is a genotypic variation of Cd concentration in the shoots and grains of rice. Using the world rice core collection, ‘Jarjan’, ‘Anjana Dhan’, and ‘Cho-ko-koku’ were observed with a significantly higher level of Cd accumulation in the shoots and grains. Moreover, OsHMA3, a heavy metal transporter, was identified as a responsive gene of quantitative trait locus (QTL) for high Cd concentration in the shoots of these three varieties likewise. However, it is difficult to apply practical phytoremediation to these varieties because of their unfavorable agricultural traits, such as shatter and easily lodged. New rice varieties and lines were bred for Cd phytoremediation using OsHMA3 as a DNA marker selection. All of them accumulated Cd in the shoots equal to or higher than ‘Cho-ko-koku’ with improved cultivation traits. Therefore, they can be used for practical Cd phytoremediation.

Reclamation competence of Crotalaria juncea with the amalgamation and influence of indigenous bacteria on a waste dump of bauxite mine

The accumulated bauxite mine soil had an acidic pH of 5.52 ± 0.12 and more heavy metals such as Cr, Cd, Zn, and Pb, which can cause severe soil and water pollution to the nearby farmlands and water reservoirs. Hence, the work was designed to find the possibility of reclamation of bauxite mine soil through Crotalaria juncea with the amalgamation of native metal degrading bacterial isolates. Out of 15 bacterial cultures, only 2 isolates (B3 and B14) showed excellent metal tolerance (for up to 750 mg L^-1), solubilizing (15.27-38.7 mg kg^-1) (including phosphate: 47.4 ± 1.79%), and degrading potential (22.8 ± 0.89 to 31.5 ± 1.6%) than the others. These B3 and B14 isolates were recognized as B. borstelensis UTM105 (1432 bp) and B. borstelensis AK2 (1494 bp) through molecular characterization. These isolates have produced a metal stress response protein (205-43 KDa molecular weight protein) during metal stress conditions. The phytoremediation competence of C. juncea under the influence of these bacterial isolates was assessed with various treatment (I-IV) schemes. The treatment IV (C. juncea with two bacterial isolates) showed substantial physiological and biochemical results compared with the control and the other treatments. The phytoremediation competence of C. juncea was also effective in treatment IV than the others. It reduced and extracted a reasonable quantity of metals from the bauxite mine soil. The intact results accomplished that these native metals tolerant, solubilizing, and degrading bacterial isolates, could be used as optimistic bacterial candidates in combination with C. juncea for the effective reclamation of metal enriched bauxite mine soil.

Intercropping improves heavy metal phytoremediation efficiency through changing properties of rhizosphere soil in bamboo plantation

Moso bamboo is considered a potential species for heavy metal (HM) phytoremediation; however, the effect of intercropping on rhizosphere and phytoextraction remains to be elucidated. We comparatively investigated rhizobacteria, soil properties, and phytoextraction efficiency of monoculture and intercropping of Moso bamboo and Sedum plumbizincicola in Cu/Zn/Cd-contaminated soil. Compared with monocultures, intercropping increased the bacterial α-diversity indices (Shannon, Chao1) and the number of biomarkers. Intercropping reduced the contents of soil organic matter (SOM), available nutrients, and Cd and Cu in rhizosphere soils, and reduced the Cd and Zn contents in tissues of sedum. By contrast, Cd and Zn contents in tissues of bamboo increased, and the increase of organic acid in root exudates from intercropping could facilitate the HM absorption. The total amount of Cu, Zn, and Cd removed from the soil in intercropping system was 1.2, 1.9, and 1.8 times than those in monoculture bamboo, respectively. The abundances of Proteobacteria, Acidobacteria, Verrucomicrobia and Actinobacteria were higher in intercropping, playing an important role in soil nutrient cycles and HM remediation. These bacterial communities were closely correlated (P < 0.01) with SOM, available nitrogen, available phosphorus, and HMs. The results suggested this intercropping pattern can increase HM removal efficiency from polluted soils.

Gene expression analysis for selection and validation of suitable housekeeping gene(s) in cadmium exposed pigeonpea plants inoculated with arbuscular mycorrhizae

The expression stability of six commonly used housekeeping genes (18S rRNA-18S ribosomal RNA, EF1α-elongation factor 1α, ACT1-Actin 1, GAPDH-Glyceraldehyde-3-phosphate dehydrogenase, TUB6-Tubulin/FtsZ family and UBC-Ubiquitin-conjugating enzyme) were scrutinized in leaves and roots of Cd stressed pigeonpea plants inoculated with arbuscular mycorrhizal (AM) species- Rhizoglomus intraradices (Ri), Funneliformis mosseae (Fm), Claroideoglomus etunicatum (Ce), C. claroideum (Cc). The stability profile of each gene was assessed using ΔC_t, BestKeeper, NormFinder, RefFinder and geNorm algorithmic programs, which ranked different genes as most and least stable according to the tissues analysed. All the statistical algorithms ranked TUB6 as most stable and EF1α least stable housekeeping (HK) genes in both the plant tissues. The selected HK genes were verified using metallothionein (CcMT1) i.e. a stress responsive gene, whose expression altered under conditions of metal stress and AM inoculation. The expression pattern of CcMT1 varied highly when least stable reference gene was used for normalization as compared to most stable gene, under different treatments. Thus, there is a need of selecting suitable reference gene to achieve reliable results in gene expression studies using quantitative real time PCR (qRT-PCR). The study conducted will help future gene expression analysis in pigeonpea under specific stress.

Effects of arbuscular mycorrhizal fungi on the growth and toxic element uptake of Phragmites australis (Cav.) Trin. ex Steud under zinc/cadmium stress

Arbuscular mycorrhizal fungi (AMF) play an important role in improving plant tolerance and accumulation of zinc (Zn) and cadmium (Cd). The growth, physiology and absorption of elements and transport in Phragmites australis (P. australis) were investigated under Zn and Cd stress to identify the transport mechanisms of toxic trace elements (TE) under the influence of AMF. Thus, AMF were observed to alleviate the toxic effects of Zn and Cd on P. australis by increasing plant biomass and through different regulatory patterns under different TE concentrations. The activities of superoxide dismutase (SOD) and ascorbate peroxidase (APX) increased under Zn stress, and the activities of SOD, catalase (CAT), peroxidase (POD), and APX significantly increased under high concentrations of Cd. AMF differ in their strategies of regulating the transport of different metals under TE stress. Under Zn stress, the concentration of Zn in P. australis decreased by 10-57%, and the effect on Zn translocation factor (TF_Zn) was concentration-dependent. AMF increased the TF_Zn under low concentration stress, but decreased under high concentration stress. Under Cd stress, the concentration of Cd increased by as much as 17-40%, and the TF_Cd decreased. AMF were also found to change the interaction of Zn×Cd. In the absence of AMF, Cd exposure decreased the Zn concentrations in P. australis at Zn_100 mg/L and Zn_300 mg/L, while it increased the contents of Zn at Zn_700 mg/L. The opposite trend was observed following treatment with AMF. However, regardless of the concentration of Cd, the addition of Zn decreased the concentration of Cd in both treatments in both the presence and absence of AMF. Under different TE stress conditions, the regulation of metal elements by AMF in host plants does not follow a single strategy but a trade-off between different trends of transportations. The findings of our study are important for applying AMF-P. australis systems in the phytoremediation of Zn-Cd co-contaminated ecosystems.

Silencing MdGH3-2/12 in apple reduces cadmium resistance via the regulation of AM colonization

Arbuscular mycorrhizal fungi (AMF) can form a symbiotic relationship with most terrestrial plant roots, promote plant growth, and heavy metal (HM) tolerance and thus plays a crucial role in phytoremediation. However, research on the relationship between colonization level and HM tolerance is limited. In this study, apple (Malus domestica) Gretchen Hagen3 genes MdGH3-2/12 silencing plants were treated with four AMF and Cd combination treatments to determine AMF colonization levels, biomass, Cd accumulation, photosynthesis, fluorescence, reactive oxygen species (ROS) and antioxidant substance accumulation, and Cd uptake, transport and detoxification gene expression levels. Results indicate the greater sensitivity of transgenic plants under AMF inoculation and Cd treatment compared with wild type (WT) via lower AMF colonization levels, biomass accumulation, photosynthetic parameters, and the accumulation and clearance homeostasis of ROS, as well as lower detoxification expression levels and higher Cd uptake and transport expression levels. Our study essentially demonstrates that MdGH3-2/12 plays an important role in Cd stress tolerance by regulating AM colonization in apple.

Upland rice intercropping with Solanum nigrum inoculated with arbuscular mycorrhizal fungi reduces grain Cd while promoting phytoremediation of Cd-contaminated soil

Intercropping of hyperaccumulators with crops is a promising measure to enhance phytoremediation without impeding agricultural production. A Cd-hyperaccumulator, Solanum nigrum L. (S. nigrum), was intercropped with upland rice in a pot and rhizo-box experiment with Cd-contaminated soil to evaluate the combined effects of intercropping and arbuscular mycorrhizal fungi on plant growth and Cd accumulation. The results showed that, compared with monoculture, the combined treatments markedly decreased Cd concentration in rice parts, with the lowest Cd concentration in brown rice (reducing by 64.5%). The spatial distribution of root surface area and DTPA-Cd in the rhizo-box indicated competitive Cd uptake by neighbouring S. nigrum. Moreover, the combined treatments reduced Nramp5 expression but increased HMA3 levels in rice roots, leading to lower bioaccumulation and transfer coefficients. Additionally, fewer secreted organic acids and a higher rhizosphere pH were observed in rice. Conversely, the combined treatments promoted biomass, root length, root surface area, and decreased the rhizosphere pH in S. nigrum, thus increasing the Cd accumulation. Although the intercropping system with AMF inoculation notably reduced rice yield, the land-use efficiency was higher. These results provided insights into the role of AMF in the upland rice/S. nigrum system and demonstrated an alternative system for Cd phytoremediation.

Earthworm and arbuscular mycorrhiza interactions: Strategies to motivate antioxidant responses and improve soil functionality

Earthworms and arbuscular mycorrhizal fungi (AMF) act synergistically in the rhizosphere and may increase host plant tolerance to Cd. However, mechanisms by which earthworm-AMF-plant partnerships counteract Cd phytotoxicity are unknown. Thus, we evaluated individual and interactive effects of these soil organisms on photosynthesis, antioxidant capacity, and essential nutrient uptake by Solanum nigrum, as well as on soil quality following Cd exposure (0-120 mg kg^-1). Decreases in biomass and photosynthetic activity, as well as nutrient imbalances were observed in Cd-stressed plants; however, the addition of AMF and earthworms reversed these effects. Cd exposure increased superoxide dismutase (SOD), peroxidase (POD), and catalase (CAT) activities, whereas inoculation with Rhizophagus intraradices decreased those. Soil enzymatic activity decreased by 15-60% with increasing Cd concentrations. However, Cd-mediated toxicity was partially reversed by soil organisms. Earthworms and AMF ameliorated soil quality based on soil enzyme activity. At 120 mg kg^-1 Cd, the urease, catalase, and acid phosphatase activities were 1.6-, 1.4-, and 1.2-fold higher, respectively, in soils co-incubated with earthworms and AMF than in uninoculated soil. Cd inhibited shoot Fe and Ca phytoaccumulation, whereas AMF and earthworms normalized the status of essential elements in plants. Cd detoxification by earthworm-AMF-S. nigrum symbiosis was manifested by increases in plant biomass accumulation (22-117%), chlorophyll content (17-63%), antioxidant levels (SOD 10-18%, POD 9-25%, total polyphenols 17-22%, flavonoids 15-29%, and glutathione 7-61%). It also ameliorated the photosynthetic capacity, and macro- and micronutrient statuses of plants; markedly reduced the levels of malondialdehyde (20-27%), superoxide anion (29-36%), and hydrogen peroxide (19-30%); and upregulated the transcription level of FeSOD. Thus, the combined action of earthworms and AMF feasibly enhances metal tolerance of hyperaccumulating plants and improves the quality of polluted soil.

Phytoremediation of Cadmium: Physiological, Biochemical, and Molecular Mechanisms

Cadmium (Cd) is one of the most toxic metals in the environment, and has noxious effects on plant growth and production. Cd-accumulating plants showed reduced growth and productivity. Therefore, remediation of this non-essential and toxic pollutant is a prerequisite. Plant-based phytoremediation methodology is considered as one a secure, environmentally friendly, and cost-effective approach for toxic metal remediation. Phytoremediating plants transport and accumulate Cd inside their roots, shoots, leaves, and vacuoles. Phytoremediation of Cd-contaminated sites through hyperaccumulator plants proves a ground-breaking and profitable choice to combat the contaminants. Moreover, the efficiency of Cd phytoremediation and Cd bioavailability can be improved by using plant growth-promoting bacteria (PGPB). Emerging modern molecular technologies have augmented our insight into the metabolic processes involved in Cd tolerance in regular cultivated crops and hyperaccumulator plants. Plants’ development via genetic engineering tools, like enhanced metal uptake, metal transport, Cd accumulation, and the overall Cd tolerance, unlocks new directions for phytoremediation. In this review, we outline the physiological, biochemical, and molecular mechanisms involved in Cd phytoremediation. Further, a focus on the potential of omics and genetic engineering strategies has been documented for the efficient remediation of a Cd-contaminated environment.