1
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Turhan E, Minaei M, Narwal P, Meier B, Kouřil K, Kurzbach D. Short-lived calcium carbonate precursors observed in situ via Bullet-dynamic nuclear polarization. Commun Chem 2024; 7:210. [PMID: 39289493 PMCID: PMC11408677 DOI: 10.1038/s42004-024-01300-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/30/2024] [Accepted: 09/05/2024] [Indexed: 09/19/2024] Open
Abstract
The discovery of (meta)stable pre-nucleation species (PNS) challenges the established nucleation-and-growth paradigm. While stable PNS with long lifetimes are readily accessible experimentally, identifying and characterizing early-stage intermediates with short lifetimes remains challenging. We demonstrate that species with lifetimes ≪ 5 s can be characterized by nuclear magnetic resonance spectroscopy when boosted by 'Bullet' dynamic nuclear polarization (Bullet-DNP). We investigate the previously elusive early-stage prenucleation of calcium carbonates in the highly supersaturated concentration regime, characterizing species that form within milliseconds after the encounter of calcium and carbonate ions and show that ionic pre-nucleation species not only govern the solidification of calcium carbonates at weak oversaturation but also initiate rapid precipitation events at high concentrations. Such, we report a transient co-existence of two PNS with distinct molecular sizes and different compositions. This methodological advance may open new possibilities for studying and exploiting carbonate-based material formation in unexplored parts of the phase space.
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Affiliation(s)
- Ertan Turhan
- Institute of Biological Chemistry, Faculty of Chemistry, University of Vienna, Währinger Str. 38, 1090, Vienna, Austria
- University of Vienna, Vienna Doctoral School in Chemistry (DoSChem), Währinger Str. 42, 1090, Vienna, Austria
| | - Masoud Minaei
- Institute of Biological Interfaces 4, Karlsruhe Institute of Technology, 76344, Egenstein-Leopoldshafen, Germany
| | - Pooja Narwal
- Institute of Biological Interfaces 4, Karlsruhe Institute of Technology, 76344, Egenstein-Leopoldshafen, Germany
| | - Benno Meier
- Institute of Biological Interfaces 4, Karlsruhe Institute of Technology, 76344, Egenstein-Leopoldshafen, Germany.
- Institute of Physical Chemistry, Karlsruhe Institute of Technology, 76131, Karlsruhe, Germany.
| | - Karel Kouřil
- Institute of Biological Interfaces 4, Karlsruhe Institute of Technology, 76344, Egenstein-Leopoldshafen, Germany
| | - Dennis Kurzbach
- Institute of Biological Chemistry, Faculty of Chemistry, University of Vienna, Währinger Str. 38, 1090, Vienna, Austria.
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2
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Razanahoera A, Sonnefeld A, Sheberstov K, Narwal P, Minaei M, Kouřil K, Bodenhausen G, Meier B. Hyperpolarization of Long-Lived States of Protons in Aliphatic Chains by Bullet Dynamic Nuclear Polarization, Revealed on the Fly by Spin-Lock-Induced Crossing. J Phys Chem Lett 2024; 15:9024-9029. [PMID: 39189820 DOI: 10.1021/acs.jpclett.4c01457] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 08/28/2024]
Abstract
It is shown that proton spins highly polarized by dynamic nuclear polarization (DNP) retain substantial polarization upon the rapid transfer of frozen bullets from a polarizer to an NMR spectrometer. After injection in solution, the resulting hyperpolarization in aliphatic chains comprises population imbalances between singlet and triplet states of geminal protons and combinations thereof. These hyperpolarized long-lived states (LLSs) can be reconverted into observable transverse magnetization by polychromatic spin-lock-induced crossing (poly-SLIC). This reconversion can be achieved simultaneously in several molecules. Consecutive partial reconversion steps can be carried out to determine the lifetimes TLLS on the fly in a single experiment. The enhancement factors of hyperpolarized LLS-derived signals in our experiments are at least 2 orders of magnitude. These methods extend applications of bullet-DNP to protons in molecules containing short aliphatic chains and may be useful for drug screening.
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Affiliation(s)
- Aiky Razanahoera
- Laboratoire des Biomolécules, LBM, Département de Chimie, École Normale Supérieure, PSL University, Sorbonne Université, CNRS, 75005 Paris, France
| | - Anna Sonnefeld
- Laboratoire des Biomolécules, LBM, Département de Chimie, École Normale Supérieure, PSL University, Sorbonne Université, CNRS, 75005 Paris, France
| | - Kirill Sheberstov
- Laboratoire des Biomolécules, LBM, Département de Chimie, École Normale Supérieure, PSL University, Sorbonne Université, CNRS, 75005 Paris, France
| | - Pooja Narwal
- Institute of Biological Interfaces 4, Karlsruhe Institute of Technology, Eggenstein-Leopoldshafen 76344, Germany
| | - Masoud Minaei
- Institute of Biological Interfaces 4, Karlsruhe Institute of Technology, Eggenstein-Leopoldshafen 76344, Germany
| | - Karel Kouřil
- Institute of Biological Interfaces 4, Karlsruhe Institute of Technology, Eggenstein-Leopoldshafen 76344, Germany
| | - Geoffrey Bodenhausen
- Laboratoire des Biomolécules, LBM, Département de Chimie, École Normale Supérieure, PSL University, Sorbonne Université, CNRS, 75005 Paris, France
| | - Benno Meier
- Institute of Biological Interfaces 4, Karlsruhe Institute of Technology, Eggenstein-Leopoldshafen 76344, Germany
- Institute of Physical Chemistry, Karlsruhe Institute of Technology, Karlsruhe 76131, Germany
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3
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Chen S, Zhang L, Li S, Yuan Y, Jiang B, Jiang Z, Zhang X, Zhou X, Liu M. Detecting biomarkers by dynamic nuclear polarization enhanced magnetic resonance. Natl Sci Rev 2024; 11:nwae228. [PMID: 39144741 PMCID: PMC11321254 DOI: 10.1093/nsr/nwae228] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/27/2024] [Revised: 05/26/2024] [Accepted: 06/16/2024] [Indexed: 08/16/2024] Open
Abstract
Hyperpolarization stands out as a technique capable of significantly enhancing the sensitivity of nuclear magnetic resonance (NMR) and magnetic resonance imaging (MRI). Dynamic nuclear polarization (DNP), among various hyperpolarization methods, has gained prominence for its efficacy in real-time monitoring of metabolism and physiology. By administering a hyperpolarized substrate through dissolution DNP (dDNP), the biodistribution and metabolic changes of the DNP agent can be visualized spatiotemporally. This approach proves to be a distinctive and invaluable tool for non-invasively studying cellular metabolism in vivo, particularly in animal models. Biomarkers play a pivotal role in influencing the growth and metastasis of tumor cells by closely interacting with them, and accordingly detecting pathological alterations of these biomarkers is crucial for disease diagnosis and therapy. In recent years, a range of hyperpolarized DNP molecular bioresponsive agents utilizing various nuclei, such as 13C, 15N, 31P, 89Y, etc., have been developed. In this context, we explore how these magnetic resonance signals of nuclear spins enhanced by DNP respond to biomarkers, including pH, metal ions, enzymes, or redox processes. This review aims to offer insights into the design principles of responsive DNP agents, target selection, and the mechanisms of action for imaging. Such discussions aim to propel the future development and application of DNP-based biomedical imaging agents.
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Affiliation(s)
- Shizhen Chen
- State Key Laboratory of Magnetic Resonance and Atomic and Molecular Physics, National Center for Magnetic Resonance in Wuhan, Wuhan Institute of Physics and Mathematics, Innovation Academy for Precision Measurement Science and Technology, Chinese Academy of Sciences, Wuhan 430071, China
- University of Chinese Academy of Sciences, Beijing 100049, China
- School of Biomedical Engineering, Hainan University, Haikou 570228, China
| | - Lei Zhang
- State Key Laboratory of Magnetic Resonance and Atomic and Molecular Physics, National Center for Magnetic Resonance in Wuhan, Wuhan Institute of Physics and Mathematics, Innovation Academy for Precision Measurement Science and Technology, Chinese Academy of Sciences, Wuhan 430071, China
- University of Chinese Academy of Sciences, Beijing 100049, China
| | - Sha Li
- State Key Laboratory of Magnetic Resonance and Atomic and Molecular Physics, National Center for Magnetic Resonance in Wuhan, Wuhan Institute of Physics and Mathematics, Innovation Academy for Precision Measurement Science and Technology, Chinese Academy of Sciences, Wuhan 430071, China
- University of Chinese Academy of Sciences, Beijing 100049, China
| | - Yaping Yuan
- State Key Laboratory of Magnetic Resonance and Atomic and Molecular Physics, National Center for Magnetic Resonance in Wuhan, Wuhan Institute of Physics and Mathematics, Innovation Academy for Precision Measurement Science and Technology, Chinese Academy of Sciences, Wuhan 430071, China
- University of Chinese Academy of Sciences, Beijing 100049, China
| | - Bin Jiang
- State Key Laboratory of Magnetic Resonance and Atomic and Molecular Physics, National Center for Magnetic Resonance in Wuhan, Wuhan Institute of Physics and Mathematics, Innovation Academy for Precision Measurement Science and Technology, Chinese Academy of Sciences, Wuhan 430071, China
- University of Chinese Academy of Sciences, Beijing 100049, China
| | - Zhongxing Jiang
- State Key Laboratory of Magnetic Resonance and Atomic and Molecular Physics, National Center for Magnetic Resonance in Wuhan, Wuhan Institute of Physics and Mathematics, Innovation Academy for Precision Measurement Science and Technology, Chinese Academy of Sciences, Wuhan 430071, China
- University of Chinese Academy of Sciences, Beijing 100049, China
| | - Xu Zhang
- State Key Laboratory of Magnetic Resonance and Atomic and Molecular Physics, National Center for Magnetic Resonance in Wuhan, Wuhan Institute of Physics and Mathematics, Innovation Academy for Precision Measurement Science and Technology, Chinese Academy of Sciences, Wuhan 430071, China
| | - Xin Zhou
- State Key Laboratory of Magnetic Resonance and Atomic and Molecular Physics, National Center for Magnetic Resonance in Wuhan, Wuhan Institute of Physics and Mathematics, Innovation Academy for Precision Measurement Science and Technology, Chinese Academy of Sciences, Wuhan 430071, China
- University of Chinese Academy of Sciences, Beijing 100049, China
- School of Biomedical Engineering, Hainan University, Haikou 570228, China
| | - Maili Liu
- State Key Laboratory of Magnetic Resonance and Atomic and Molecular Physics, National Center for Magnetic Resonance in Wuhan, Wuhan Institute of Physics and Mathematics, Innovation Academy for Precision Measurement Science and Technology, Chinese Academy of Sciences, Wuhan 430071, China
- University of Chinese Academy of Sciences, Beijing 100049, China
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4
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Vaneeckhaute E, Bocquelet C, Bellier L, Le HN, Rougier N, Jegadeesan SA, Vinod-Kumar S, Mathies G, Veyre L, Thieuleux C, Melzi R, Banks D, Kempf J, Stern Q, Jannin S. Full optimization of dynamic nuclear polarization on a 1 tesla benchtop polarizer with hyperpolarizing solids. Phys Chem Chem Phys 2024; 26:22049-22061. [PMID: 39114945 PMCID: PMC11307143 DOI: 10.1039/d4cp02022g] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/15/2024] [Accepted: 07/10/2024] [Indexed: 08/10/2024]
Abstract
Hyperpolarization by dissolution dynamic nuclear polarization (dDNP) provides the opportunity to dramatically increase the weak nuclear magnetic resonance (NMR) signal of liquid molecular targets using the high polarization of electron radicals. Unfortunately, the solution-state hyperpolarization can only be accessed once since freezing and melting of the hyperpolarized sample happen in an irreversible fashion. A way to expand the application horizon of dDNP can therefore be to find a recyclable DNP alternative. To pursue this ambitious goal, we recently introduced the concept of recyclable hyperpolarized flow (HypFlow) DNP where hyperpolarization happens in porous hyperpolarizing solids placed in a compact benchtop DNP polarizer at a magnetic field of 1 T and a temperature of 77 K. Here we aim to optimize the radical concentrations immobilized in hyperpolarizing solids with the objective of generating as much polarization as possible in a timeframe (<1 s) compatible with future recyclable DNP applications. To do so, the solid-state DNP enhancement factors, build-up rates and DNP spectra of different hyperpolarizing solids containing various nitroxide radical loadings (20-74 μmol cm-3) are compared against the DNP performance of varying nitroxide concentrations (10-100 mM) solvated in a glassy frozen solution. We demonstrate that in <1 s, polarization enhancement goes up to 56 and 102 with surface-bound and solvated radicals, respectively, under the optimized conditions. For the range of nitroxide concentrations used cross effect DNP seems to be the dominant mechanism under benchtop conditions. This was deduced from the electron paramagnetic resonance (EPR) lineshape of TEMPOL investigated using Q-band EPR measurements.
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Affiliation(s)
- Ewoud Vaneeckhaute
- Université Claude Bernard Lyon 1, CNRS, ENS Lyon, UCBL, CRMN UMR 5082, 69100 Villeurbanne, France.
| | - Charlotte Bocquelet
- Université Claude Bernard Lyon 1, CNRS, ENS Lyon, UCBL, CRMN UMR 5082, 69100 Villeurbanne, France.
| | - Léa Bellier
- Université Claude Bernard Lyon 1, CNRS, ENS Lyon, UCBL, CRMN UMR 5082, 69100 Villeurbanne, France.
| | - Huu-Nghia Le
- Université Claude Bernard Lyon 1, Institut de Chimie de Lyon, CP2M UMR 5128 CNRS-UCBL-CPE Lyon, 69616 Villeurbanne, France
| | - Nathan Rougier
- Université Claude Bernard Lyon 1, CNRS, ENS Lyon, UCBL, CRMN UMR 5082, 69100 Villeurbanne, France.
| | | | - Sanjay Vinod-Kumar
- Department of Chemistry, University of Konstanz, Universitätsstr. 10, 78464, Konstanz, Germany
| | - Guinevere Mathies
- Department of Chemistry, University of Konstanz, Universitätsstr. 10, 78464, Konstanz, Germany
| | - Laurent Veyre
- Université Claude Bernard Lyon 1, Institut de Chimie de Lyon, CP2M UMR 5128 CNRS-UCBL-CPE Lyon, 69616 Villeurbanne, France
| | - Chloe Thieuleux
- Université Claude Bernard Lyon 1, Institut de Chimie de Lyon, CP2M UMR 5128 CNRS-UCBL-CPE Lyon, 69616 Villeurbanne, France
| | - Roberto Melzi
- Bruker Italia S.r.l., Viale V. Lancetti 43, 20158 Milano, Italy
| | - Daniel Banks
- Bruker Biospin, Billerica, Massachusetts 01821, USA
| | - James Kempf
- Bruker Biospin, Billerica, Massachusetts 01821, USA
| | - Quentin Stern
- Université Claude Bernard Lyon 1, CNRS, ENS Lyon, UCBL, CRMN UMR 5082, 69100 Villeurbanne, France.
| | - Sami Jannin
- Université Claude Bernard Lyon 1, CNRS, ENS Lyon, UCBL, CRMN UMR 5082, 69100 Villeurbanne, France.
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5
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Gierse M, Dagys L, Keim M, Lucas S, Josten F, Plenio MB, Schwartz I, Knecht S, Eills J. Hyperpolarizing Small Molecules using Parahydrogen and Solid-State Spin Diffusion. Angew Chem Int Ed Engl 2024; 63:e202319341. [PMID: 38805673 DOI: 10.1002/anie.202319341] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/14/2023] [Revised: 05/06/2024] [Accepted: 05/27/2024] [Indexed: 05/30/2024]
Abstract
Parahydrogen-induced polarization (PHIP) is an inexpensive way to produce hyperpolarized molecules with polarization levels of >10 % in the solution-state, but is strongly limited in generality since it requires chemical reactions/ interactions with H2. Here we report a new method to widen the scope of PHIP hyperpolarization: a source molecule is produced via PHIP with high 13C polarization, and precipitated out of solution together with a target species. Spin diffusion within the solid carries the polarization onto 13C spins of the target, which can then be dissolved for solution-state applications. We name this method PHIP-SSD (PHIP with solid-state spin diffusion) and demonstrate it using PHIP-polarized [1-13C]-fumarate as the source molecule, to polarize different 13C-labelled target molecules. 13C polarizations of between 0.01 and 3 % were measured on [1-13C]-benzoic acid, depending on the molar ratio of fumarate:benzoate in the solid state. We also show that PHIP-SSD does not require specific co-crystallization conditions by grinding dry powders of target molecules together with solid fumarate crystals, and obtain 13C signal enhancements of between 100 and 200 on [13C,15N2]-urea, [1-13C]-pyruvate, and [1-13C]-benzoic acid. This approach appears to be a promising new strategy for facile hyperpolarization based on PHIP.
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Affiliation(s)
- Martin Gierse
- NVision Imaging Technologies GmbH, 89081, Ulm, Germany
| | | | - Michael Keim
- NVision Imaging Technologies GmbH, 89081, Ulm, Germany
| | | | - Felix Josten
- NVision Imaging Technologies GmbH, 89081, Ulm, Germany
| | - Martin B Plenio
- Institut für Theoretische Physik and IQST, Universität Ulm, Albert-Einstein-Allee 11, 89069, Ulm, Germany
| | - Ilai Schwartz
- NVision Imaging Technologies GmbH, 89081, Ulm, Germany
| | | | - James Eills
- NVision Imaging Technologies GmbH, 89081, Ulm, Germany
- Institute of Biological Information Processing (IBI-7), Forschungszentrum Jülich, 52425, Jülich, Germany
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6
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Giannoulis A, Butbul K, Carmieli R, Kim J, Montrazi ET, Singh K, Frydman L. Cryogenic and Dissolution DNP NMR on γ-Irradiated Organic Molecules. J Am Chem Soc 2024; 146:20758-20769. [PMID: 39029111 PMCID: PMC11295201 DOI: 10.1021/jacs.4c04041] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/21/2024] [Revised: 06/19/2024] [Accepted: 06/21/2024] [Indexed: 07/21/2024]
Abstract
Nuclear magnetic resonance (NMR) plays a central role in the elucidation of chemical structures but is often limited by low sensitivity. Dissolution dynamic nuclear polarization (dDNP) emerges as a transformative methodology for both solution-state NMR and metabolic NMR imaging, which could overcome this limitation. Typically, dDNP relies on combining a stable radical with the analyte within a uniform glass under cryogenic conditions. The electron polarization is then transferred through microwave irradiation to the nuclei. The present study explores the use of radicals introduced via γ-irradiation, as bearers of the electron spins that will enhance 1H or 13C nuclides. 1H solid-state NMR spectra of γ-irradiated powders at 1-5 K revealed, upon microwave irradiation, signal enhancements that, in general, were higher than those achieved through conventional glass-based DNP. Transfer of these samples to a solution-state NMR spectrometer via a rapid dissolution driven by a superheated water provided significant enhancements of solution-state 1H NMR signals. Enhancements of 13C signals in the γ-irradiated solids were more modest, as a combined consequence of a low radical concentration and of the dilute concentration of 13C in the natural abundant samples examined. Nevertheless, ca. 700-800-fold enhancements in 13C solution NMR spectra of certain sites recorded at 11.7 T could still be achieved. A total disappearance of the radicals upon performing a dDNP-like aqueous dissolution and a high stability of the samples were found. Overall, the study showcases the advantages and limitations of γ-irradiated radicals as candidates for advancing spectroscopic dDNP-enhanced NMR.
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Affiliation(s)
- Angeliki Giannoulis
- Department
of Chemical and Biological Physics, Weizmann
Institute of Science, 234 Herzl Street, Rehovot 7610001, Israel
| | - Korin Butbul
- Department
of Chemical and Biological Physics, Weizmann
Institute of Science, 234 Herzl Street, Rehovot 7610001, Israel
| | - Raanan Carmieli
- Department
of Chemical Research Support, Weizmann Institute
of Science, 234 Herzl
Street, Rehovot 7610001, Israel
| | - Jihyun Kim
- Department
of Chemical and Biological Physics, Weizmann
Institute of Science, 234 Herzl Street, Rehovot 7610001, Israel
- Department
of Chemistry Education, Kyungpook National
University, Daegu 41566, Republic of Korea
| | - Elton Tadeu Montrazi
- Department
of Chemical and Biological Physics, Weizmann
Institute of Science, 234 Herzl Street, Rehovot 7610001, Israel
| | - Kawarpal Singh
- Department
of Chemical and Biological Physics, Weizmann
Institute of Science, 234 Herzl Street, Rehovot 7610001, Israel
- Yusuf
Hamied Department of Chemistry, University
of Cambridge, Cambridge CB2 1EW, U.K.
| | - Lucio Frydman
- Department
of Chemical and Biological Physics, Weizmann
Institute of Science, 234 Herzl Street, Rehovot 7610001, Israel
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7
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Fukazawa J, Mochizuki Y, Kanai S, Miura N, Negoro M, Kagawa A. Real-Time Monitoring of Hydrolysis Reactions of Pyrophosphates with Dissolution Dynamic Nuclear Polarization. J Phys Chem Lett 2024; 15:7288-7294. [PMID: 38980118 DOI: 10.1021/acs.jpclett.4c01456] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 07/10/2024]
Abstract
Dissolution dynamic nuclear polarization (d-DNP) has enabled applications such as the real-time monitoring of chemical reactions. Such applications are mainly for 13C and 15N spins with long spin-lattice relaxation times in the molecules of interest. However, the only applications for phosphorus using d-DNP are pH imaging and nucleation during crystallization due to the short relaxation times. Here we show that it is possible to observe enzyme reactions using d-DNP with phosphorus. Hyperpolarized 31P spins in pyrophosphate were obtained using bullet-DNP, which requires less dilution of highly polarized solid samples. Real-time monitoring of the hydrolysis reaction of pyrophosphate by inorganic pyrophosphatase from baker's yeast at physiological pH and was successfully achieved and the reaction rate was determined. This is an important reaction for a wide range of applications related to medicine, agriculture, and quantum life science.
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Affiliation(s)
- Jun Fukazawa
- Center for Quantum Information and Quantum Biology, Osaka University, Toyonaka, Osaka 560-0043, Japan
| | - Yuuki Mochizuki
- Graduate School of Engineering Science, Osaka University, Toyonaka, Osaka 560-8531, Japan
| | - Sakyo Kanai
- Graduate School of Engineering Science, Osaka University, Toyonaka, Osaka 560-8531, Japan
| | - Natsuko Miura
- Department of Applied Biological Chemistry, Graduate School of Agriculture, Osaka Metropolitan University, Sakai, Osaka 599-8231, Japan
| | - Makoto Negoro
- Center for Quantum Information and Quantum Biology, Osaka University, Toyonaka, Osaka 560-0043, Japan
- Institute for Quantum Life Science (iQLS), National Institutes for Quantum and Radiological Science and Technology (QST), Chiba 263-8555, Japan
- Premium Research Institute for Human Metaverse Medicine, Osaka University, Suita, Osaka 565-0871, Japan
| | - Akinori Kagawa
- Center for Quantum Information and Quantum Biology, Osaka University, Toyonaka, Osaka 560-0043, Japan
- Premium Research Institute for Human Metaverse Medicine, Osaka University, Suita, Osaka 565-0871, Japan
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8
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Camenisch GM, Wili N, Jeschke G, Ernst M. Pulsed dynamic nuclear polarization: a comprehensive Floquet description. Phys Chem Chem Phys 2024; 26:17666-17683. [PMID: 38868989 PMCID: PMC11202326 DOI: 10.1039/d4cp01788a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/30/2024] [Accepted: 06/05/2024] [Indexed: 06/14/2024]
Abstract
Dynamic nuclear polarization (DNP) experiments using microwave (mw) pulse sequences are one approach to transfer the larger polarization on the electron spin to nuclear spins of interest. How the result of such experiments depends on the external magnetic field and the excitation power is part of an ongoing debate and of paramount importance for applications that require high chemical-shift resolution. To date numerical simulations using operator-based Floquet theory have been used to predict and explain experimental data. However, such numerical simulations provide only limited insight into parameters relevant for efficient polarization transfer, such as transition amplitudes or resonance offsets. Here we present an alternative method to describe pulsed DNP experiments by using matrix-based Floquet theory. This approach leads to analytical expressions for the transition amplitudes and resonance offsets. We validate the method by comparing computations by these analytical expressions to their numerical counterparts and to experimental results for the XiX, TOP and TPPM DNP sequences. Our results explain the experimental data and are in very good agreement with the numerical simulations. The analytical expressions allow for the discussion of the scaling behaviour of pulsed DNP experiments with respect to the external magnetic field. We find that the transition amplitudes scale inversely with the external magnetic field.
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Affiliation(s)
- Gian-Marco Camenisch
- Department of Chemistry and Applied Biosciences, ETH Zürich, Zürich, Switzerland.
| | - Nino Wili
- Interdisciplinary Nanoscience Center (iNANO) and Department of Chemistry, Aarhus University, Aarhus, Denmark
| | - Gunnar Jeschke
- Department of Chemistry and Applied Biosciences, ETH Zürich, Zürich, Switzerland.
| | - Matthias Ernst
- Department of Chemistry and Applied Biosciences, ETH Zürich, Zürich, Switzerland.
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9
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Mitin D, Bullinger F, Dobrynin S, Engelmann J, Scheffler K, Kolokolov M, Krumkacheva O, Buckenmaier K, Kirilyuk I, Chubarov A. Contrast Agents Based on Human Serum Albumin and Nitroxides for 1H-MRI and Overhauser-Enhanced MRI. Int J Mol Sci 2024; 25:4041. [PMID: 38612851 PMCID: PMC11012161 DOI: 10.3390/ijms25074041] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/27/2024] [Revised: 03/18/2024] [Accepted: 03/20/2024] [Indexed: 04/14/2024] Open
Abstract
In cancer diagnostics, magnetic resonance imaging (MRI) uses contrast agents to enhance the distinction between the target tissue and background. Several promising approaches have been developed to increase MRI sensitivity, one of which is Overhauser dynamic nuclear polarization (ODNP)-enhanced MRI (OMRI). In this study, a macromolecular construct based on human serum albumin and nitroxyl radicals (HSA-NIT) was developed using a new synthesis method that significantly increased the modification to 21 nitroxide residues per protein. This was confirmed by electron paramagnetic resonance (EPR) spectroscopy and matrix-assisted laser desorption/ionization time-of-flight (MALDI ToF) mass spectrometry. Gel electrophoresis and circular dichroism showed no significant changes in the structure of HSA-NITs, and no oligomers were formed during modification. The cytotoxicity of HSA-NITs was comparable to that of native albumin. HSA-NITs were evaluated as potential "metal-free" organic radical relaxation-based contrast agents for 1H-MRI and as hyperpolarizing contrast agents for OMRI. Relaxivities (longitudinal and transversal relaxation rates r1 and r2) for HSA-NITs were measured at different magnetic field strengths (1.88, 3, 7, and 14 T). Phantoms were used to demonstrate the potential use of HSA-NIT as a T1- and T2-weighted relaxation-based contrast agent at 3 T and 14 T. The efficacy of 1H Overhauser dynamic nuclear polarization (ODNP) in liquids at an ultralow magnetic field (ULF, B0 = 92 ± 0.8 μT) was investigated for HSA-NIT conjugates. The HSA-NITs themselves did not show ODNP enhancement; however, under the proteolysis conditions simulating cancer tissue, HSA-NIT conjugates were cleaved into lower-molecular-weight (MW) protein fragments that activate ODNP capabilities, resulting in a maximum achievable enhancement |Emax| of 40-50 and a radiofrequency power required to achieve half of Emax, P1/2, of 21-27 W. The HSA-NIT with a higher degree of modification released increased the number of spin probes upon biodegradation, which significantly enhanced the Overhauser effect. Thus, HSA-NITs may represent a new class of MRI relaxation-based contrast agents as well as novel cleavable conjugates for use as hyperpolarizing contrast agents (HCAs) in OMRI.
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Affiliation(s)
- Dmitry Mitin
- Institute of Chemical Biology and Fundamental Medicine SB RAS, 630090 Novosibirsk, Russia;
| | - Friedemann Bullinger
- High-Field Magnetic Resonance Center, Max Planck Institute for Biological Cybernetics, 72076 Tuebingen, Germany; (F.B.); (J.E.); (K.S.); (K.B.)
| | - Sergey Dobrynin
- N.N. Vorozhtsov Institute of Organic Chemistry SB RAS, 630090 Novosibirsk, Russia;
| | - Jörn Engelmann
- High-Field Magnetic Resonance Center, Max Planck Institute for Biological Cybernetics, 72076 Tuebingen, Germany; (F.B.); (J.E.); (K.S.); (K.B.)
| | - Klaus Scheffler
- High-Field Magnetic Resonance Center, Max Planck Institute for Biological Cybernetics, 72076 Tuebingen, Germany; (F.B.); (J.E.); (K.S.); (K.B.)
- Department of Biomedical Magnetic Resonance, Eberhard-Karls University, 72076 Tuebingen, Germany
| | - Mikhail Kolokolov
- International Tomography Center SB RAS, 630090 Novosibirsk, Russia; (M.K.); (O.K.)
| | - Olesya Krumkacheva
- International Tomography Center SB RAS, 630090 Novosibirsk, Russia; (M.K.); (O.K.)
| | - Kai Buckenmaier
- High-Field Magnetic Resonance Center, Max Planck Institute for Biological Cybernetics, 72076 Tuebingen, Germany; (F.B.); (J.E.); (K.S.); (K.B.)
| | - Igor Kirilyuk
- N.N. Vorozhtsov Institute of Organic Chemistry SB RAS, 630090 Novosibirsk, Russia;
| | - Alexey Chubarov
- Institute of Chemical Biology and Fundamental Medicine SB RAS, 630090 Novosibirsk, Russia;
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10
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Peng Y, Zhang Z, He L, Li C, Liu M. NMR spectroscopy for metabolomics in the living system: recent progress and future challenges. Anal Bioanal Chem 2024; 416:2319-2334. [PMID: 38240793 PMCID: PMC10950998 DOI: 10.1007/s00216-024-05137-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/24/2023] [Revised: 12/08/2023] [Accepted: 01/10/2024] [Indexed: 03/21/2024]
Abstract
Metabolism is a fundamental process that underlies human health and diseases. Nuclear magnetic resonance (NMR) techniques offer a powerful approach to identify metabolic processes and track the flux of metabolites at the molecular level in living systems. An in vitro study through in-cell NMR tracks metabolites in real time and investigates protein structures and dynamics in a state close to their most natural environment. This technique characterizes metabolites and proteins involved in metabolic pathways in prokaryotic and eukaryotic cells. In vivo magnetic resonance spectroscopy (MRS) enables whole-organism metabolic monitoring by visualizing the spatial distribution of metabolites and targeted proteins. One limitation of these NMR techniques is the sensitivity, for which a possible improved approach is through isotopic enrichment or hyperpolarization methods, including dynamic nuclear polarization (DNP) and parahydrogen-induced polarization (PHIP). DNP involves the transfer of high polarization from electronic spins of radicals to surrounding nuclear spins for signal enhancements, allowing the detection of low-abundance metabolites and real-time monitoring of metabolic activities. PHIP enables the transfer of nuclear spin polarization from parahydrogen to other nuclei for signal enhancements, particularly in proton NMR, and has been applied in studies of enzymatic reactions and cell signaling. This review provides an overview of in-cell NMR, in vivo MRS, and hyperpolarization techniques, highlighting their applications in metabolic studies and discussing challenges and future perspectives.
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Affiliation(s)
- Yun Peng
- State Key Laboratory of Magnetic Resonance and Atomic Molecular Physics, National Center for Magnetic Resonance in Wuhan, Innovation Academy for Precision Measurement Science and Technology, Chinese Academy of Sciences, Wuhan, 430071, China
| | - Zeting Zhang
- State Key Laboratory of Magnetic Resonance and Atomic Molecular Physics, National Center for Magnetic Resonance in Wuhan, Innovation Academy for Precision Measurement Science and Technology, Chinese Academy of Sciences, Wuhan, 430071, China
| | - Lichun He
- State Key Laboratory of Magnetic Resonance and Atomic Molecular Physics, National Center for Magnetic Resonance in Wuhan, Innovation Academy for Precision Measurement Science and Technology, Chinese Academy of Sciences, Wuhan, 430071, China
| | - Conggang Li
- State Key Laboratory of Magnetic Resonance and Atomic Molecular Physics, National Center for Magnetic Resonance in Wuhan, Innovation Academy for Precision Measurement Science and Technology, Chinese Academy of Sciences, Wuhan, 430071, China
| | - Maili Liu
- State Key Laboratory of Magnetic Resonance and Atomic Molecular Physics, National Center for Magnetic Resonance in Wuhan, Innovation Academy for Precision Measurement Science and Technology, Chinese Academy of Sciences, Wuhan, 430071, China.
- Optics Valley Laboratory, Wuhan, 430074, Hubei, China.
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11
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Batarchuk V, Shepelytskyi Y, Grynko V, Kovacs AH, Hodgson A, Rodriguez K, Aldossary R, Talwar T, Hasselbrink C, Ruset IC, DeBoef B, Albert MS. Hyperpolarized Xenon-129 Chemical Exchange Saturation Transfer (HyperCEST) Molecular Imaging: Achievements and Future Challenges. Int J Mol Sci 2024; 25:1939. [PMID: 38339217 PMCID: PMC10856220 DOI: 10.3390/ijms25031939] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/01/2024] [Revised: 01/25/2024] [Accepted: 01/28/2024] [Indexed: 02/12/2024] Open
Abstract
Molecular magnetic resonance imaging (MRI) is an emerging field that is set to revolutionize our perspective of disease diagnosis, treatment efficacy monitoring, and precision medicine in full concordance with personalized medicine. A wide range of hyperpolarized (HP) 129Xe biosensors have been recently developed, demonstrating their potential applications in molecular settings, and achieving notable success within in vitro studies. The favorable nuclear magnetic resonance properties of 129Xe, coupled with its non-toxic nature, high solubility in biological tissues, and capacity to dissolve in blood and diffuse across membranes, highlight its superior role for applications in molecular MRI settings. The incorporation of reporters that combine signal enhancement from both hyperpolarized 129Xe and chemical exchange saturation transfer holds the potential to address the primary limitation of low sensitivity observed in conventional MRI. This review provides a summary of the various applications of HP 129Xe biosensors developed over the last decade, specifically highlighting their use in MRI. Moreover, this paper addresses the evolution of in vivo applications of HP 129Xe, discussing its potential transition into clinical settings.
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Affiliation(s)
- Viktoriia Batarchuk
- Chemistry Department, Lakehead University, Thunder Bay, ON P7B 5E1, Canada; (V.B.)
- Thunder Bay Regional Health Research Institute, Thunder Bay, ON P7B 6V4, Canada
| | - Yurii Shepelytskyi
- Chemistry Department, Lakehead University, Thunder Bay, ON P7B 5E1, Canada; (V.B.)
- Thunder Bay Regional Health Research Institute, Thunder Bay, ON P7B 6V4, Canada
| | - Vira Grynko
- Thunder Bay Regional Health Research Institute, Thunder Bay, ON P7B 6V4, Canada
- Chemistry and Materials Science Program, Lakehead University, Thunder Bay, ON P7B 5E1, Canada
| | - Antal Halen Kovacs
- Applied Life Science Program, Lakehead University, Thunder Bay, ON P7B 5E1, Canada
| | - Aaron Hodgson
- Physics Program, Lakehead University, Thunder Bay, ON P7B 5E1, Canada
| | - Karla Rodriguez
- Chemistry Department, Lakehead University, Thunder Bay, ON P7B 5E1, Canada; (V.B.)
| | - Ruba Aldossary
- Thunder Bay Regional Health Research Institute, Thunder Bay, ON P7B 6V4, Canada
| | - Tanu Talwar
- Chemistry Department, Lakehead University, Thunder Bay, ON P7B 5E1, Canada; (V.B.)
| | - Carson Hasselbrink
- Chemistry & Biochemistry Department, California Polytechnic State University, San Luis Obispo, CA 93407-005, USA
| | | | - Brenton DeBoef
- Department of Chemistry, University of Rhode Island, Kingston, RI 02881, USA
| | - Mitchell S. Albert
- Chemistry Department, Lakehead University, Thunder Bay, ON P7B 5E1, Canada; (V.B.)
- Thunder Bay Regional Health Research Institute, Thunder Bay, ON P7B 6V4, Canada
- Faculty of Medical Sciences, Northern Ontario School of Medicine, Thunder Bay, ON P7B 5E1, Canada
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12
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Stern Q, Reynard-Feytis Q, Elliott SJ, Ceillier M, Cala O, Ivanov K, Jannin S. Rapid and Simple 13C-Hyperpolarization by 1H Dissolution Dynamic Nuclear Polarization Followed by an Inline Magnetic Field Inversion. J Am Chem Soc 2023; 145:27576-27586. [PMID: 38054954 DOI: 10.1021/jacs.3c09209] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/07/2023]
Abstract
Dissolution dynamic nuclear polarization (dDNP) is a method of choice for preparing hyperpolarized 13C metabolites such as 1-13C-pyruvate used for in vivo applications, including the real-time monitoring of cancer cell metabolism in human patients. The approach consists of transferring the high polarization of electron spins to nuclear spins via microwave irradiation at low temperatures (1.0-1.5 K) and moderate magnetic fields (3.3-7 T). The solid sample is then dissolved and transferred to an NMR spectrometer or MRI scanner for detection in the liquid state. Common dDNP protocols use direct hyperpolarization of 13C spins reaching polarizations of >50% in ∼1-2 h. Alternatively, 1H spins are polarized before transferring their polarization to 13C spins using cross-polarization, reaching polarization levels similar to those of direct DNP in only ∼20 min. However, it relies on more complex instrumentation, requiring highly skilled personnel. Here, we explore an alternative route using 1H dDNP followed by inline adiabatic magnetic field inversion in the liquid state during the transfer. 1H polarizations of >70% in the solid state are obtained in ∼5-10 min. As the hyperpolarized sample travels from the dDNP polarizer to the NMR spectrometer, it goes through a field inversion chamber, which causes the 1H → 13C polarization transfer. This transfer is made possible by the J-coupling between the heteronuclei, which mixes the Zeeman states at zero-field and causes an antilevel crossing. We report liquid-state 13C polarization up to ∼17% for 3-13C-pyruvate and 13C-formate. The instrumentation needed to perform this experiment in addition to a conventional dDNP polarizer is simple and readily assembled.
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Affiliation(s)
- Quentin Stern
- Université Claude Bernard Lyon 1, CRMN UMR-5082, CNRS, ENS Lyon, Villeurbanne 69100 France
| | - Quentin Reynard-Feytis
- Université Claude Bernard Lyon 1, CRMN UMR-5082, CNRS, ENS Lyon, Villeurbanne 69100 France
| | - Stuart J Elliott
- Université Claude Bernard Lyon 1, CRMN UMR-5082, CNRS, ENS Lyon, Villeurbanne 69100 France
- Molecular Sciences Research Hub, Imperial College London, London W12 0BZ, United Kingdom
| | - Morgan Ceillier
- Université Claude Bernard Lyon 1, CRMN UMR-5082, CNRS, ENS Lyon, Villeurbanne 69100 France
| | - Olivier Cala
- Université Claude Bernard Lyon 1, CRMN UMR-5082, CNRS, ENS Lyon, Villeurbanne 69100 France
| | - Konstantin Ivanov
- International Tomography Center, Siberian Branch of the Russian Academy of Science, Novosibirsk 630090, Russia
- Novosibirsk State University, Novosibirsk 630090, Russia
| | - Sami Jannin
- Université Claude Bernard Lyon 1, CRMN UMR-5082, CNRS, ENS Lyon, Villeurbanne 69100 France
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13
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Chen X, Bertho G, Caradeuc C, Giraud N, Lucas-Torres C. Present and future of pure shift NMR in metabolomics. MAGNETIC RESONANCE IN CHEMISTRY : MRC 2023; 61:654-673. [PMID: 37157858 DOI: 10.1002/mrc.5356] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/13/2022] [Revised: 04/30/2023] [Accepted: 05/04/2023] [Indexed: 05/10/2023]
Abstract
NMR is one of the most powerful techniques for the analysis of biological samples in the field of metabolomics. However, the high complexity of fluids, tissues, or other biological materials taken from living organisms is still a challenge for state-of-the-art pulse sequences, thereby limiting the detection, the identification, and the quantification of metabolites. In this context, the resolution enhancement provided by broadband homonuclear decoupling methods, which allows for simplifying 1 H multiplet patterns into singlets, has placed this so-called pure shift technique as a promising approach to perform metabolic profiling with unparalleled level of detail. In recent years, the many advances achieved in the design of pure shift experiments has paved the way to the analysis of a wide range of biological samples with ultra-high resolution. This review leads the reader from the early days of the main pure shift methods that have been successfully developed over the last decades to address complex samples, to the most recent and promising applications of pure shift NMR to the field of NMR-based metabolomics.
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Affiliation(s)
- Xi Chen
- Université Paris Cité, CNRS, Laboratoire de Chimie et de Biochimie Pharmacologiques et Toxicologiques, Paris, France
| | - Gildas Bertho
- Université Paris Cité, CNRS, Laboratoire de Chimie et de Biochimie Pharmacologiques et Toxicologiques, Paris, France
| | - Cédric Caradeuc
- Université Paris Cité, CNRS, Laboratoire de Chimie et de Biochimie Pharmacologiques et Toxicologiques, Paris, France
| | - Nicolas Giraud
- Université Paris Cité, CNRS, Laboratoire de Chimie et de Biochimie Pharmacologiques et Toxicologiques, Paris, France
| | - Covadonga Lucas-Torres
- Université Paris Cité, CNRS, Laboratoire de Chimie et de Biochimie Pharmacologiques et Toxicologiques, Paris, France
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14
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Praud C, Ribay V, Dey A, Charrier B, Mandral J, Farjon J, Dumez JN, Giraudeau P. Optimization of heteronuclear ultrafast 2D NMR for the study of complex mixtures hyperpolarized by dynamic nuclear polarization. ANALYTICAL METHODS : ADVANCING METHODS AND APPLICATIONS 2023; 15:6209-6219. [PMID: 37942549 DOI: 10.1039/d3ay01681a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/10/2023]
Abstract
Hyperpolarized 13C NMR at natural abundance, based on dissolution dynamic nuclear polarization (d-DNP), provides rich, sensitive and repeatable 13C NMR fingerprints of complex mixtures. However, the sensitivity enhancement is associated with challenges such as peak overlap and the difficulty to assign hyperpolarized 13C signals. Ultrafast (UF) 2D NMR spectroscopy makes it possible to record heteronuclear 2D maps of d-DNP hyperpolarized samples. Heteronuclear UF 2D NMR can provide correlation peaks that link quaternary carbons and protons through long-range scalar couplings. Here, we report the analytical assessment of an optimized UF long-range HETCOR pulse sequence, applied to the detection of metabolic mixtures at natural abundance and hyperpolarized by d-DNP, based on repeatability and sensitivity considerations. We show that metabolite-dependent limits of quantification in the range of 1-50 mM (in the sample before dissolution) can be achieved, with a repeatability close to 10% and a very good linearity. We provide a detailed comparison of such analytical performance in two different dissolution solvents, D2O and MeOD. The reported pulse sequence appears as an useful analytical tool to facilitate the assignment and integration of metabolite signals in hyperpolarized complex mixtures.
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Affiliation(s)
- Clément Praud
- Nantes Université, CNRS, CEISAM, UMR 6230, F-44000 Nantes, France.
| | - Victor Ribay
- Nantes Université, CNRS, CEISAM, UMR 6230, F-44000 Nantes, France.
| | - Arnab Dey
- Nantes Université, CNRS, CEISAM, UMR 6230, F-44000 Nantes, France.
| | - Benoît Charrier
- Nantes Université, CNRS, CEISAM, UMR 6230, F-44000 Nantes, France.
| | - Joris Mandral
- Nantes Université, CNRS, CEISAM, UMR 6230, F-44000 Nantes, France.
| | - Jonathan Farjon
- Nantes Université, CNRS, CEISAM, UMR 6230, F-44000 Nantes, France.
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15
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Ferrer F, Juramy M, Jabbour R, Cousin S, Ziarelli F, Mollica G, Thureau P, Viel S. Polarization Amplification in Dynamic Nuclear Polarization Magic-Angle Spinning Solid-State Nuclear Magnetic Resonance by Solubilizing Traditional Ionic Salts. J Phys Chem Lett 2023; 14:9619-9623. [PMID: 37870262 DOI: 10.1021/acs.jpclett.3c02455] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/24/2023]
Abstract
Dynamic nuclear polarization can improve the sensitivity of magic-angle spinning solid-state NMR experiments by 1-2 orders of magnitude. In aqueous media, experiments are usually performed using the so-called DNP juice, a glycerol-d8/D2O/H2O mixture (60/30/10, v/v/v) that can form a homogeneous glass at cryogenic temperatures. This acts as a cryoprotectant and prevents phase separation of the paramagnetic polarizing agents (PAs) that are added to the mixture to provide the source of electron spin polarization required for DNP. Here, we show that relatively high 1H DNP enhancements (∼60) can also be obtained in water without glycerol (or other glass forming agents) simply by dissolving high concentrations of electrolytes (such as NaCl or LiCl), which perturb the otherwise unavoidable ice crystallization observed upon cooling, thereby reducing PA phase separation and restoring DNP efficiency.
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Affiliation(s)
| | - Marie Juramy
- Aix-Marseille Univ, CNRS, ICR, 13013, Marseille, France
| | - Ribal Jabbour
- Aix-Marseille Univ, CNRS, Centrale Méditerranée, FSCM, 13013 Marseille, France
| | - Samuel Cousin
- Aix-Marseille Univ, CNRS, ICR, 13013, Marseille, France
| | - Fabio Ziarelli
- Aix-Marseille Univ, CNRS, Centrale Méditerranée, FSCM, 13013 Marseille, France
| | | | | | - Stéphane Viel
- Aix-Marseille Univ, CNRS, ICR, 13013, Marseille, France
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16
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Sakamoto K, Hamachi T, Miyokawa K, Tateishi K, Uesaka T, Kurashige Y, Yanai N. Polarizing agents beyond pentacene for efficient triplet dynamic nuclear polarization in glass matrices. Proc Natl Acad Sci U S A 2023; 120:e2307926120. [PMID: 37871226 PMCID: PMC10622900 DOI: 10.1073/pnas.2307926120] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/11/2023] [Accepted: 09/08/2023] [Indexed: 10/25/2023] Open
Abstract
Triplet dynamic nuclear polarization (triplet-DNP) is a technique that can obtain high nuclear polarization under moderate conditions. However, in order to obtain practically useful polarization, large single crystals doped with a polarizing agent must be strictly oriented with respect to the magnetic field to sharpen the electron spin resonance (ESR) spectra, which is a fatal problem that prevents its application to truly useful biomolecular targets. Instead of this conventional physical approach of controlling crystal orientation, here, we propose a chemical approach, i.e., molecular design of polarizing agents; pentacene molecules, the most typical triplet-DNP polarizing agent, are modified so as to make the triplet electron distribution wider and more isotropic without loss of the triplet polarization. The thiophene-modified pentacene exhibits a sharper and stronger ESR spectrum than the parent pentacene, and state-of-the-art quantum chemical calculations revealed that the direction of the spin polarization is altered by the modification with thiophene moieties and the size of D and E parameters are reduced from parent pentacene due to the partial delocalization of spin densities on the thiophene moieties. The triplet-DNP with the new polarizing agent successfully exceeds the previous highest 1H polarization of glassy materials by a factor of 5. This demonstrates the feasibility of a polarizing agent that can surpass pentacene, the best polarizing agent for more than 30 y since triplet-DNP was first reported, in the unoriented state. This work provides a pathway toward practically useful high nuclear polarization of various biomolecules by triplet-DNP.
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Affiliation(s)
- Keita Sakamoto
- Department of Applied Chemistry, Graduate School of Engineering, Kyushu University, Fukuoka819-0395, Japan
| | - Tomoyuki Hamachi
- Department of Applied Chemistry, Graduate School of Engineering, Kyushu University, Fukuoka819-0395, Japan
| | - Katsuki Miyokawa
- Department of Chemistry, Graduate School of Science, Kyoto University, Kyoto606-8502, Japan
| | - Kenichiro Tateishi
- Cluster for Pioneering Research, RIKEN, RIKEN Nishina Center for Accelerator-Based Science, Wako, Saitama351-0198, Japan
| | - Tomohiro Uesaka
- Cluster for Pioneering Research, RIKEN, RIKEN Nishina Center for Accelerator-Based Science, Wako, Saitama351-0198, Japan
| | - Yuki Kurashige
- Department of Chemistry, Graduate School of Science, Kyoto University, Kyoto606-8502, Japan
- Japan Science and Technology Agency-Fusion Oriented REsearch for disruptive Science and Technology, Kawaguchi, Saitama332-0012, Japan
| | - Nobuhiro Yanai
- Department of Applied Chemistry, Graduate School of Engineering, Kyushu University, Fukuoka819-0395, Japan
- Japan Science and Technology Agency-Fusion Oriented REsearch for disruptive Science and Technology, Kawaguchi, Saitama332-0012, Japan
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17
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Reimets N, Ausmees K, Vija S, Trummal A, Uudsemaa M, Reile I. Parahydrogen hyperpolarized NMR detection of underivatized short oligopeptides. Analyst 2023; 148:5407-5415. [PMID: 37791463 DOI: 10.1039/d3an01345f] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/05/2023]
Abstract
Parahydrogen hyperpolarization has evolved into a versatile tool in NMR, allowing substantial sensitivity enhancements in analysis of biological samples. Herein we show how its application scope can be extended from small metabolites to underivatized oligopeptides in solution. Based on a homologous series of alanine oligomers, we report on an experimental and DFT study on the structure of the oligopeptide and hyperpolarization catalyst complexes formed in the process. We demonstrate that alanine oligomers coordinate to the iridium carbene-based catalyst in three different ways, each giving rise to distinctive hydride signals. Moreover, the exact structures of the transient oligopeptide-catalyst complexes are oligomer-specific. This work gives a first insight into how the organometallic iridium-N-heterocyclic carbene-based parahydrogen hyperpolarization catalyst interacts with biopolymers that have multiple catalyst binding sites. A preliminary application example is demonstrated for oligopeptide detection in urine, a complex biological mixture.
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Affiliation(s)
- Nele Reimets
- National Institute of Chemical Physics and Biophysics, Akadeemia tee 23, Tallinn 12618, Estonia.
- School of Science, Tallinn University of Technology, Ehitajate tee 5, Tallinn 19086, Estonia
| | - Kerti Ausmees
- National Institute of Chemical Physics and Biophysics, Akadeemia tee 23, Tallinn 12618, Estonia.
| | - Sirje Vija
- National Institute of Chemical Physics and Biophysics, Akadeemia tee 23, Tallinn 12618, Estonia.
| | - Aleksander Trummal
- National Institute of Chemical Physics and Biophysics, Akadeemia tee 23, Tallinn 12618, Estonia.
| | - Merle Uudsemaa
- National Institute of Chemical Physics and Biophysics, Akadeemia tee 23, Tallinn 12618, Estonia.
| | - Indrek Reile
- National Institute of Chemical Physics and Biophysics, Akadeemia tee 23, Tallinn 12618, Estonia.
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18
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Turhan E, Pötzl C, Keil W, Negroni M, Kouřil K, Meier B, Romero JA, Kazimierczuk K, Goldberga I, Azaïs T, Kurzbach D. Biphasic NMR of Hyperpolarized Suspensions-Real-Time Monitoring of Solute-to-Solid Conversion to Watch Materials Grow. THE JOURNAL OF PHYSICAL CHEMISTRY. C, NANOMATERIALS AND INTERFACES 2023; 127:19591-19598. [PMID: 37817917 PMCID: PMC10561236 DOI: 10.1021/acs.jpcc.3c04198] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 06/22/2023] [Revised: 09/07/2023] [Indexed: 10/12/2023]
Abstract
Nuclear magnetic resonance (NMR) spectroscopy is a key method for the determination of molecular structures. Due to its intrinsically high (i.e., atomistic) resolution and versatility, it has found numerous applications for investigating gases, liquids, and solids. However, liquid-state NMR has found little application for suspensions of solid particles as the resonances of such systems are excessively broadened, typically beyond the detection threshold. Herein, we propose a route to overcoming this critical limitation by enhancing the signals of particle suspensions by >3.000-fold using dissolution dynamic nuclear polarization (d-DNP) coupled with rapid solid precipitation. For the proof-of-concept series of experiments, we employed calcium phosphate (CaP) as a model system. By d-DNP, we boosted the signals of phosphate 31P spins before rapid CaP precipitation inside the NMR spectrometer, leading to the inclusion of the hyperpolarized phosphate into CaP-nucleated solid particles within milliseconds. With our approach, within only 1 s of acquisition time, we obtained spectra of biphasic systems, i.e., micrometer-sized dilute solid CaP particles coexisting with their solution-state precursors. Thus, this work is a step toward real-time characterization of the solid-solution equilibrium. Finally, integrating the hyperpolarized data with molecular dynamics simulations and electron microscopy enabled us to shed light on the CaP formation mechanism in atomistic detail.
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Affiliation(s)
- Ertan Turhan
- Institute
of Biological Chemistry, Faculty of Chemistry, University of Vienna, Währinger Str. 38, Vienna 1090, Austria
- University
of Vienna, Vienna Doctoral School in Chemistry (DoSChem), Währinger Str. 42, Vienna 1090, Austria
| | - Christopher Pötzl
- Institute
of Biological Chemistry, Faculty of Chemistry, University of Vienna, Währinger Str. 38, Vienna 1090, Austria
- University
of Vienna, Vienna Doctoral School in Chemistry (DoSChem), Währinger Str. 42, Vienna 1090, Austria
| | - Waldemar Keil
- Institute
of Biological Chemistry, Faculty of Chemistry, University of Vienna, Währinger Str. 38, Vienna 1090, Austria
| | - Mattia Negroni
- Institute
of Biological Chemistry, Faculty of Chemistry, University of Vienna, Währinger Str. 38, Vienna 1090, Austria
| | - Karel Kouřil
- Institute
of Biological Interfaces 4, Karlsruhe Institute
of Technology, Egenstein-Leopoldshafen 76344, Germany
| | - Benno Meier
- Institute
of Biological Interfaces 4, Karlsruhe Institute
of Technology, Egenstein-Leopoldshafen 76344, Germany
- Institute
of Physical Chemistry, Karlsruhe Institute
of Technology, Karlsruhe 76131, Germany
| | - Javier Agustin Romero
- Centre
of New Technologies, University of Warsaw, ul. Banacha 2c, Warsaw 02-097, Poland
| | | | - Ieva Goldberga
- Sorbonne
Université, CNRS, Laboratoire de Chimie de la Matière
Condensée de Paris (LCMCP), 4, place Jussieu, Paris F-75005, France
| | - Thierry Azaïs
- Sorbonne
Université, CNRS, Laboratoire de Chimie de la Matière
Condensée de Paris (LCMCP), 4, place Jussieu, Paris F-75005, France
| | - Dennis Kurzbach
- Institute
of Biological Chemistry, Faculty of Chemistry, University of Vienna, Währinger Str. 38, Vienna 1090, Austria
- University
of Vienna, Vienna Doctoral School in Chemistry (DoSChem), Währinger Str. 42, Vienna 1090, Austria
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19
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Guarin DO, Joshi SM, Samoilenko A, Kabir MSH, Hardy EE, Takahashi AM, Ardenkjaer-Larsen JH, Chekmenev EY, Yen YF. Development of Dissolution Dynamic Nuclear Polarization of [ 15 N 3 ]Metronidazole: A Clinically Approved Antibiotic. Angew Chem Int Ed Engl 2023; 62:e202219181. [PMID: 37247411 PMCID: PMC10524734 DOI: 10.1002/anie.202219181] [Citation(s) in RCA: 5] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/27/2022] [Revised: 05/12/2023] [Accepted: 05/26/2023] [Indexed: 05/31/2023]
Abstract
We report dissolution Dynamic Nuclear Polarization (d-DNP) of [15 N3 ]metronidazole ([15 N3 ]MNZ) for the first time. Metronidazole is a clinically approved antibiotic, which can be potentially employed as a hypoxia-sensing molecular probe using 15 N hyperpolarized (HP) nucleus. The DNP process is very efficient for [15 N3 ]MNZ with an exponential build-up constant of 13.8 min using trityl radical. After dissolution and sample transfer to a nearby 4.7 T Magnetic Resonance Imaging scanner, HP [15 N3 ]MNZ lasted remarkably long with T1 values up to 343 s and 15 N polarizations up to 6.4 %. A time series of HP [15 N3 ]MNZ images was acquired in vitro using a steady state free precession sequence on the 15 NO2 peak. The signal lasted over 13 min with notably long T2 of 20.5 s. HP [15 N3 ]MNZ was injected in the tail vein of a healthy rat, and dynamic spectroscopy was performed over the rat brain. The in vivo HP 15 N signals persisted over 70 s, demonstrating an unprecedented opportunity for in vivo studies.
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Affiliation(s)
- David O Guarin
- Department of Radiology, Athinoula A. Martinos Center for Biomedical Imaging, Massachusetts General Hospital, 149 13th St., MA 02129, Charlestown, USA
- Polarize ApS., Asmussens Alle 1, 1808, Frederiksberg, Denmak
| | - Sameer M Joshi
- Department of Chemistry, Integrative Biosciences (Ibio), Karmanos Cancer Institute (KCI), Wayne State University, MI 48202, Detroit, USA
| | - Anna Samoilenko
- Department of Chemistry, Integrative Biosciences (Ibio), Karmanos Cancer Institute (KCI), Wayne State University, MI 48202, Detroit, USA
| | - Mohammad S H Kabir
- Department of Chemistry, Integrative Biosciences (Ibio), Karmanos Cancer Institute (KCI), Wayne State University, MI 48202, Detroit, USA
| | - Erin E Hardy
- Department of Radiology, Athinoula A. Martinos Center for Biomedical Imaging, Massachusetts General Hospital, 149 13th St., MA 02129, Charlestown, USA
| | - Atsush M Takahashi
- Department of Brain and Cognitive Sciences, McGovern Institute for Brain Research, Massachusetts Institute of Technology, MA 02139, Cambridge, USA
| | - Jan H Ardenkjaer-Larsen
- Polarize ApS., Asmussens Alle 1, 1808, Frederiksberg, Denmak
- Department of Health Technology, Technical University of Denmark, 348, Ørsteds Pl., 2800, Kongens Lyngby, Denmark
| | - Eduard Y Chekmenev
- Department of Chemistry, Integrative Biosciences (Ibio), Karmanos Cancer Institute (KCI), Wayne State University, MI 48202, Detroit, USA
- Russian Academy of Sciences (RAS), 14 Leninskiy Prospekt, 119991, Moscow, Russia
| | - Yi-Fen Yen
- Department of Radiology, Athinoula A. Martinos Center for Biomedical Imaging, Massachusetts General Hospital, 149 13th St., MA 02129, Charlestown, USA
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20
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Vaneeckhaute E, Tyburn J, Kempf JG, Martens JA, Breynaert E. Reversible Parahydrogen Induced Hyperpolarization of 15 N in Unmodified Amino Acids Unraveled at High Magnetic Field. ADVANCED SCIENCE (WEINHEIM, BADEN-WURTTEMBERG, GERMANY) 2023; 10:e2207112. [PMID: 37211713 PMCID: PMC10427394 DOI: 10.1002/advs.202207112] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/02/2022] [Revised: 05/02/2023] [Indexed: 05/23/2023]
Abstract
Amino acids (AAs) and ammonia are metabolic markers essential for nitrogen metabolism and cell regulation in both plants and humans. NMR provides interesting opportunities to investigate these metabolic pathways, yet lacks sensitivity, especially in case of 15 N. In this study, spin order embedded in p-H2 is used to produce on-demand reversible hyperpolarization in 15 N of pristine alanine and ammonia under ambient protic conditions directly in the NMR spectrometer. This is made possible by designing a mixed-ligand Ir-catalyst, selectively ligating the amino group of AA by exploiting ammonia as a strongly competitive co-ligand and preventing deactivation of Ir by bidentate ligation of AA. The stereoisomerism of the catalyst complexes is determined by hydride fingerprinting using 1 H/D scrambling of the associated N-functional groups on the catalyst (i.e., isotopological fingerprinting), and unravelled by 2D-ZQ-NMR. Monitoring the transfer of spin order from p-H2 to 15 N nuclei of ligated and free alanine and ammonia targets using SABRE-INEPT with variable exchange delays pinpoints the monodentate elucidated catalyst complexes to be most SABRE active. Also RF-spin locking (SABRE-SLIC) enables transfer of hyperpolarization to 15 N. The presented high-field approach can be a valuable alternative to SABRE-SHEATH techniques since the obtained catalytic insights (stereochemistry and kinetics) will remain valid at ultra-low magnetic fields.
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Affiliation(s)
- Ewoud Vaneeckhaute
- COK‐katCentre for Surface Chemistry and Catalysis—Characterization and Application TeamKU LeuvenCelestijnenlaan 200F, box 2461LeuvenB‐3001Belgium
- NMRCoReNMR/X‐Ray Platform for Convergence ResearchKU LeuvenCelestijnenlaan 200F, box 2461LeuvenB‐3001Belgium
- Univ LyonCNRS, ENS LyonUCBLUniversité de LyonCRMN UMR 5280Villeurbanne69100France
| | - Jean‐Max Tyburn
- Bruker Biospin34 Rue de l'Industrie BP 10002Wissembourg Cedex67166France
| | | | - Johan A. Martens
- COK‐katCentre for Surface Chemistry and Catalysis—Characterization and Application TeamKU LeuvenCelestijnenlaan 200F, box 2461LeuvenB‐3001Belgium
- NMRCoReNMR/X‐Ray Platform for Convergence ResearchKU LeuvenCelestijnenlaan 200F, box 2461LeuvenB‐3001Belgium
- Deutsches Elektronen‐Synchrotron DESY – Centre for Molecular Water Science (CMWS)Notkestraße 8522607HamburgGermany
| | - Eric Breynaert
- COK‐katCentre for Surface Chemistry and Catalysis—Characterization and Application TeamKU LeuvenCelestijnenlaan 200F, box 2461LeuvenB‐3001Belgium
- NMRCoReNMR/X‐Ray Platform for Convergence ResearchKU LeuvenCelestijnenlaan 200F, box 2461LeuvenB‐3001Belgium
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21
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Negroni M, Kurzbach D. Missing Pieces in Structure Puzzles: How Hyperpolarized NMR Spectroscopy Can Complement Structural Biology and Biochemistry. Chembiochem 2023; 24:e202200703. [PMID: 36624049 DOI: 10.1002/cbic.202200703] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/30/2022] [Revised: 01/08/2023] [Accepted: 01/09/2023] [Indexed: 01/11/2023]
Abstract
Structure determination lies at the heart of many biochemical research programs. However, the "giants": X-ray diffraction, electron microscopy, molecular dynamics simulations, and nuclear magnetic resonance, among others, leave quite a few dark spots on the structural pictures drawn of proteins, nucleic acids, membranes, and other biomacromolecules. For example, structural models under physiological conditions or of short-lived intermediates often remain out of reach of the established experimental methods. This account frames the possibility of including hyperpolarized, that is, dramatically signal-enhanced NMR in existing workflows to fill these spots with detailed depictions. We highlight how integrating methods based on dissolution dynamic nuclear polarization can provide valuable complementary information about formerly inaccessible conformational spaces for many systems. A particular focus will be on hyperpolarized buffers to facilitate the NMR structure determination of challenging systems.
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Affiliation(s)
- Mattia Negroni
- Faculty of Chemistry, Institute of Biological Chemistry, University of Vienna, Währinger Str. 38, 1090, Vienna, Austria
| | - Dennis Kurzbach
- Faculty of Chemistry, Institute of Biological Chemistry, University of Vienna, Währinger Str. 38, 1090, Vienna, Austria
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22
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Eills J, Budker D, Cavagnero S, Chekmenev EY, Elliott SJ, Jannin S, Lesage A, Matysik J, Meersmann T, Prisner T, Reimer JA, Yang H, Koptyug IV. Spin Hyperpolarization in Modern Magnetic Resonance. Chem Rev 2023; 123:1417-1551. [PMID: 36701528 PMCID: PMC9951229 DOI: 10.1021/acs.chemrev.2c00534] [Citation(s) in RCA: 64] [Impact Index Per Article: 64.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/30/2022] [Indexed: 01/27/2023]
Abstract
Magnetic resonance techniques are successfully utilized in a broad range of scientific disciplines and in various practical applications, with medical magnetic resonance imaging being the most widely known example. Currently, both fundamental and applied magnetic resonance are enjoying a major boost owing to the rapidly developing field of spin hyperpolarization. Hyperpolarization techniques are able to enhance signal intensities in magnetic resonance by several orders of magnitude, and thus to largely overcome its major disadvantage of relatively low sensitivity. This provides new impetus for existing applications of magnetic resonance and opens the gates to exciting new possibilities. In this review, we provide a unified picture of the many methods and techniques that fall under the umbrella term "hyperpolarization" but are currently seldom perceived as integral parts of the same field. Specifically, before delving into the individual techniques, we provide a detailed analysis of the underlying principles of spin hyperpolarization. We attempt to uncover and classify the origins of hyperpolarization, to establish its sources and the specific mechanisms that enable the flow of polarization from a source to the target spins. We then give a more detailed analysis of individual hyperpolarization techniques: the mechanisms by which they work, fundamental and technical requirements, characteristic applications, unresolved issues, and possible future directions. We are seeing a continuous growth of activity in the field of spin hyperpolarization, and we expect the field to flourish as new and improved hyperpolarization techniques are implemented. Some key areas for development are in prolonging polarization lifetimes, making hyperpolarization techniques more generally applicable to chemical/biological systems, reducing the technical and equipment requirements, and creating more efficient excitation and detection schemes. We hope this review will facilitate the sharing of knowledge between subfields within the broad topic of hyperpolarization, to help overcome existing challenges in magnetic resonance and enable novel applications.
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Affiliation(s)
- James Eills
- Institute
for Bioengineering of Catalonia, Barcelona
Institute of Science and Technology, 08028Barcelona, Spain
| | - Dmitry Budker
- Johannes
Gutenberg-Universität Mainz, 55128Mainz, Germany
- Helmholtz-Institut,
GSI Helmholtzzentrum für Schwerionenforschung, 55128Mainz, Germany
- Department
of Physics, UC Berkeley, Berkeley, California94720, United States
| | - Silvia Cavagnero
- Department
of Chemistry, University of Wisconsin, Madison, Madison, Wisconsin53706, United States
| | - Eduard Y. Chekmenev
- Department
of Chemistry, Integrative Biosciences (IBio), Karmanos Cancer Institute
(KCI), Wayne State University, Detroit, Michigan48202, United States
- Russian
Academy of Sciences, Moscow119991, Russia
| | - Stuart J. Elliott
- Molecular
Sciences Research Hub, Imperial College
London, LondonW12 0BZ, United Kingdom
| | - Sami Jannin
- Centre
de RMN à Hauts Champs de Lyon, Université
de Lyon, CNRS, ENS Lyon, Université Lyon 1, 69100Villeurbanne, France
| | - Anne Lesage
- Centre
de RMN à Hauts Champs de Lyon, Université
de Lyon, CNRS, ENS Lyon, Université Lyon 1, 69100Villeurbanne, France
| | - Jörg Matysik
- Institut
für Analytische Chemie, Universität
Leipzig, Linnéstr. 3, 04103Leipzig, Germany
| | - Thomas Meersmann
- Sir
Peter Mansfield Imaging Centre, University Park, School of Medicine, University of Nottingham, NottinghamNG7 2RD, United Kingdom
| | - Thomas Prisner
- Institute
of Physical and Theoretical Chemistry and Center of Biomolecular Magnetic
Resonance, Goethe University Frankfurt, , 60438Frankfurt
am Main, Germany
| | - Jeffrey A. Reimer
- Department
of Chemical and Biomolecular Engineering, UC Berkeley, and Materials Science Division, Lawrence Berkeley National
Laboratory, Berkeley, California94720, United States
| | - Hanming Yang
- Department
of Chemistry, University of Wisconsin, Madison, Madison, Wisconsin53706, United States
| | - Igor V. Koptyug
- International Tomography Center, Siberian
Branch of the Russian Academy
of Sciences, 630090Novosibirsk, Russia
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23
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Hune T, Mamone S, Schroeder H, Jagtap AP, Sternkopf S, Stevanato G, Korchak S, Fokken C, Müller CA, Schmidt AB, Becker D, Glöggler S. Metabolic Tumor Imaging with Rapidly Signal-Enhanced 1- 13 C-Pyruvate-d 3. Chemphyschem 2023; 24:e202200615. [PMID: 36106366 PMCID: PMC10092681 DOI: 10.1002/cphc.202200615] [Citation(s) in RCA: 14] [Impact Index Per Article: 14.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/17/2022] [Revised: 09/14/2022] [Indexed: 01/20/2023]
Abstract
The metabolism of malignant cells differs significantly from that of healthy cells and thus, it is possible to perform metabolic imaging to reveal not only the exact location of a tumor, but also intratumoral areas of high metabolic activity. Herein, we demonstrate the feasibility of metabolic tumor imaging using signal-enhanced 1-13 C-pyruvate-d3 , which is rapidly enhanced via para-hydrogen, and thus, the signal is amplified by several orders of magnitudes in less than a minute. Using as a model, human melanoma xenografts injected with signal-enhanced 1-13 C-pyruvate-d3, we show that the conversion of pyruvate into lactate can be monitored along with its kinetics, which could pave the way for rapidly detecting and monitoring changes in tumor metabolism.
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Affiliation(s)
- Theresa Hune
- NMR Signal Enhancement Group, Max Planck Institute for Multidisciplinary Sciences, Am Fassberg 11, 37077, Göttingen, Germany.,Center for Biostructural Imaging of Neurodegeneration of the University Medical Center Göttingen, Von-Siebold-Str. 3A, 37075, Göttigen, Germany
| | - Salvatore Mamone
- NMR Signal Enhancement Group, Max Planck Institute for Multidisciplinary Sciences, Am Fassberg 11, 37077, Göttingen, Germany.,Center for Biostructural Imaging of Neurodegeneration of the University Medical Center Göttingen, Von-Siebold-Str. 3A, 37075, Göttigen, Germany
| | - Henning Schroeder
- NMR Signal Enhancement Group, Max Planck Institute for Multidisciplinary Sciences, Am Fassberg 11, 37077, Göttingen, Germany.,Center for Biostructural Imaging of Neurodegeneration of the University Medical Center Göttingen, Von-Siebold-Str. 3A, 37075, Göttigen, Germany
| | - Anil P Jagtap
- NMR Signal Enhancement Group, Max Planck Institute for Multidisciplinary Sciences, Am Fassberg 11, 37077, Göttingen, Germany.,Center for Biostructural Imaging of Neurodegeneration of the University Medical Center Göttingen, Von-Siebold-Str. 3A, 37075, Göttigen, Germany
| | - Sonja Sternkopf
- NMR Signal Enhancement Group, Max Planck Institute for Multidisciplinary Sciences, Am Fassberg 11, 37077, Göttingen, Germany.,Center for Biostructural Imaging of Neurodegeneration of the University Medical Center Göttingen, Von-Siebold-Str. 3A, 37075, Göttigen, Germany
| | - Gabriele Stevanato
- NMR Signal Enhancement Group, Max Planck Institute for Multidisciplinary Sciences, Am Fassberg 11, 37077, Göttingen, Germany.,Center for Biostructural Imaging of Neurodegeneration of the University Medical Center Göttingen, Von-Siebold-Str. 3A, 37075, Göttigen, Germany
| | - Sergey Korchak
- NMR Signal Enhancement Group, Max Planck Institute for Multidisciplinary Sciences, Am Fassberg 11, 37077, Göttingen, Germany.,Center for Biostructural Imaging of Neurodegeneration of the University Medical Center Göttingen, Von-Siebold-Str. 3A, 37075, Göttigen, Germany
| | - Claudia Fokken
- Department of NMR-based Structural Biology, Max Planck Institute for Multidisciplinary Sciences, Am Fassberg 11, 37077, Göttingen, Germany
| | - Christoph A Müller
- German Cancer Consortium (DKTK), partner site Freiburg, German Cancer Research Center (DKFZ), Im Neuenheimer Feld 280, Heidelberg, 69120, Germany.,Division of Medical Physics, Department of Radiology, Medical Center, University of Freiburg, Faculty of Medicine, University of Freiburg, German Cancer Consortium (DKTK), partner site Freiburg, Killianstr. 5a, Freiburg, 79106, Germany
| | - Andreas B Schmidt
- German Cancer Consortium (DKTK), partner site Freiburg, German Cancer Research Center (DKFZ), Im Neuenheimer Feld 280, Heidelberg, 69120, Germany.,Division of Medical Physics, Department of Radiology, Medical Center, University of Freiburg, Faculty of Medicine, University of Freiburg, German Cancer Consortium (DKTK), partner site Freiburg, Killianstr. 5a, Freiburg, 79106, Germany.,Integrative Biosciences (Ibio), Department of Chemistry, Karmanos Cancer Institute (KCI), Wayne State University, 5101 Cass Ave, 48202, Detroit, MI, USA
| | - Dorothea Becker
- Department of NMR-based Structural Biology, Max Planck Institute for Multidisciplinary Sciences, Am Fassberg 11, 37077, Göttingen, Germany
| | - Stefan Glöggler
- NMR Signal Enhancement Group, Max Planck Institute for Multidisciplinary Sciences, Am Fassberg 11, 37077, Göttingen, Germany.,Center for Biostructural Imaging of Neurodegeneration of the University Medical Center Göttingen, Von-Siebold-Str. 3A, 37075, Göttigen, Germany
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24
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Picazo-Frutos R, Stern Q, Blanchard JW, Cala O, Ceillier M, Cousin SF, Eills J, Elliott SJ, Jannin S, Budker D. Zero- to Ultralow-Field Nuclear Magnetic Resonance Enhanced with Dissolution Dynamic Nuclear Polarization. Anal Chem 2023; 95:720-729. [PMID: 36563171 DOI: 10.1021/acs.analchem.2c02649] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
Abstract
Zero- to ultralow-field nuclear magnetic resonance is a modality of magnetic resonance experiment which does not require strong superconducting magnets. Contrary to conventional high-field nuclear magnetic resonance, it has the advantage of allowing high-resolution detection of nuclear magnetism through metal as well as within heterogeneous media. To achieve high sensitivity, it is common to couple zero-field nuclear magnetic resonance with hyperpolarization techniques. To date, the most common technique is parahydrogen-induced polarization, which is only compatible with a small number of compounds. In this article, we establish dissolution dynamic nuclear polarization as a versatile method to enhance signals in zero-field nuclear magnetic resonance experiments on sample mixtures of [13C]sodium formate, [1-13C]glycine, and [2-13C]sodium acetate, and our technique is immediately extendable to a broad range of molecules with >1 s relaxation times. We find signal enhancements of up to 11,000 compared with thermal prepolarization in a 2 T permanent magnet. To increase the signal in future experiments, we investigate the relaxation effects of the TEMPOL radicals used for the hyperpolarization process at zero- and ultralow-fields.
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Affiliation(s)
- Román Picazo-Frutos
- Helmholtz-Institut Mainz, GSI Helmholtzzentrum für Schwerionenforschung, Mainz55128, Germany.,Johannes Gutenberg-Universität Mainz, Mainz55128, Germany
| | - Quentin Stern
- Univ Lyon, CNRS, ENS Lyon, UCBL, Université de Lyon, CRMN UMR 5280, 69100Villeurbanne, France
| | - John W Blanchard
- Helmholtz-Institut Mainz, GSI Helmholtzzentrum für Schwerionenforschung, Mainz55128, Germany
| | - Olivier Cala
- Univ Lyon, CNRS, ENS Lyon, UCBL, Université de Lyon, CRMN UMR 5280, 69100Villeurbanne, France
| | - Morgan Ceillier
- Univ Lyon, CNRS, ENS Lyon, UCBL, Université de Lyon, CRMN UMR 5280, 69100Villeurbanne, France
| | | | - James Eills
- Helmholtz-Institut Mainz, GSI Helmholtzzentrum für Schwerionenforschung, Mainz55128, Germany.,Johannes Gutenberg-Universität Mainz, Mainz55128, Germany.,Institute for Bioengineering of Catalonia, Baldiri Reixac 10-12, Barcelona08028, Spain
| | - Stuart J Elliott
- Univ Lyon, CNRS, ENS Lyon, UCBL, Université de Lyon, CRMN UMR 5280, 69100Villeurbanne, France.,Molecular Sciences Research Hub, Imperial College London, LondonW12 0BZ, U.K
| | - Sami Jannin
- Univ Lyon, CNRS, ENS Lyon, UCBL, Université de Lyon, CRMN UMR 5280, 69100Villeurbanne, France
| | - Dmitry Budker
- Helmholtz-Institut Mainz, GSI Helmholtzzentrum für Schwerionenforschung, Mainz55128, Germany.,Johannes Gutenberg-Universität Mainz, Mainz55128, Germany
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25
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Kim J, Heo I, Luu QS, Nguyen QT, Do UT, Whiting N, Yang SH, Huh YM, Min SJ, Shim JH, Yoo WC, Lee Y. Dynamic Nuclear Polarization of Selectively 29Si-Enriched Core@shell Silica Nanoparticles. Anal Chem 2023; 95:907-916. [PMID: 36514301 DOI: 10.1021/acs.analchem.2c03464] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
Abstract
29Si silica nanoparticles (SiO2 NPs) are promising magnetic resonance imaging (MRI) probes that possess advantageous properties for in vivo applications, including suitable biocompatibility, tailorable properties, and high water dispersibility. Dynamic nuclear polarization (DNP) is used to enhance 29Si MR signals via enhanced nuclear spin alignment; to date, there has been limited success employing DNP for SiO2 NPs due to the lack of endogenous electronic defects that are required for the process. To create opportunities for SiO2-based 29Si MRI probes, we synthesized variously featured SiO2 NPs with selective 29Si isotope enrichment on homogeneous and core@shell structures (shell thickness: 10 nm, core size: 40 nm), and identified the critical factors for optimal DNP signal enhancement as well as the effective hyperpolarization depth when using an exogenous radical. Based on the synthetic design, this critical factor is the proportion of 29Si in the shell layer regardless of core enrichment. Furthermore, the effective depth of hyperpolarization is less than 10 nm between the surface and core, which demonstrates an approximately 40% elongated diffusion length for the shell-enriched NPs compared to the natural abundance NPs. This improved regulation of surface properties facilitates the development of isotopically enriched SiO2 NPs as hyperpolarized contrast agents for in vivo MRI.
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Affiliation(s)
- Jiwon Kim
- Department of Bionano Technology, Center for Bionano Intelligence Education and Research, Hanyang University, Ansan15588, South Korea
| | - Incheol Heo
- Department of Applied Chemistry, and Department of Chemical and Molecular Engineering, Center for Bionano Intelligence Education and Research, Hanyang University, Ansan15588, South Korea
| | - Quy Son Luu
- Department of Bionano Technology, Center for Bionano Intelligence Education and Research, Hanyang University, Ansan15588, South Korea
| | - Quynh Thi Nguyen
- Department of Applied Chemistry, and Department of Chemical and Molecular Engineering, Center for Bionano Intelligence Education and Research, Hanyang University, Ansan15588, South Korea
| | - Uyen Thi Do
- Department of Bionano Technology, Center for Bionano Intelligence Education and Research, Hanyang University, Ansan15588, South Korea
| | - Nicholas Whiting
- Department of Physics & Astronomy and Department of Biological & Biomedical Sciences, Rowan University, Glassboro, New Jersey08028, United States
| | - Seung-Hyun Yang
- Department of Radiology, College of Medicine, Yonsei University, Seoul03722, South Korea.,Interdisciplinary Program in Nanomedical Science and Technology, Nanomedical National Core Research Center, Yonsei University, Seoul03722, South Korea
| | - Yong-Min Huh
- Department of Radiology, College of Medicine, Yonsei University, Seoul03722, South Korea.,Severance Biomedical Science Institute, College of Medicine, Yonsei University, Seoul03722, South Korea.,YUHS-KRIBB Medical Convergence Research Institute, College of Medicine, Yonsei University, Seoul03722, South Korea.,Department of Biochemistry & Molecular Biology, College of Medicine, Yonsei University, Seoul03722, South Korea
| | - Sun-Joon Min
- Department of Applied Chemistry, and Department of Chemical and Molecular Engineering, Center for Bionano Intelligence Education and Research, Hanyang University, Ansan15588, South Korea
| | - Jeong Hyun Shim
- Quantum Magnetic Imaging Team, Korea Research Institute of Standards and Science, Daejeon34113, South Korea.,Department of Applied Measurement Science, University of Science and Technology, Daejeon34113, South Korea
| | - Won Cheol Yoo
- Department of Applied Chemistry, and Department of Chemical and Molecular Engineering, Center for Bionano Intelligence Education and Research, Hanyang University, Ansan15588, South Korea
| | - Youngbok Lee
- Department of Applied Chemistry, and Department of Chemical and Molecular Engineering, Center for Bionano Intelligence Education and Research, Hanyang University, Ansan15588, South Korea
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26
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Chen X, Caradeuc C, Montagne A, Baud V, Bertho G, Lucas-Torres C, Giraud N. Absolute Metabolite Quantification Using Pure Shift NMR: Toward Quantitative Metabolic Profiling of Aqueous Biological Samples. Anal Chem 2022; 94:14974-14984. [PMID: 36260070 DOI: 10.1021/acs.analchem.2c02823] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Accurate quantification of metabolites by nuclear magnetic resonance (NMR) is of prime importance in the field of health sciences for understanding the metabolic pathways of the investigated system, to address the mechanisms of action of diseases, and improving their diagnosis, treatment, and prognosis. Unfortunately, the absolute quantitative analysis of complex samples is still limited by sensitivity and resolution issues that are intrinsic to this technique. Ultrahigh-resolution pure shift methods have especially shown to be suitable for interpreting mixtures of metabolites in biological samples. Here, we introduce a robust analytical protocol based on the use of a pure shift library of calibration reference spectra to fit the fingerprint of each metabolite of interest and determine its concentration. The approach based on the SAPPHIRE pulse sequence enhanced with a block for solvent suppression has been validated through the results of a series of model mixtures, exhibiting excellent trueness (slope values in the range of 0.93-1.02) and linearity (R2 > 0.996) in a total time (a few hours) that is fully compatible with metabolomics studies. Furthermore, we have successfully applied our method to determine the absolute metabolite concentrations in a lymphoma extracellular medium, which improves metabolomic protocols reported to date by providing a quantitative and highly resolved vision of metabolic processes at play.
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Affiliation(s)
- X Chen
- CNRS, Laboratoire de Chimie et de Biochimie Pharmacologiques et Toxicologiques, Université Paris Cité, F-75006Paris, France
| | - C Caradeuc
- CNRS, Laboratoire de Chimie et de Biochimie Pharmacologiques et Toxicologiques, Université Paris Cité, F-75006Paris, France
| | - A Montagne
- NF-κB, Différenciation et Cancer, Université Paris Cité, F-75006Paris, France
| | - V Baud
- NF-κB, Différenciation et Cancer, Université Paris Cité, F-75006Paris, France
| | - G Bertho
- CNRS, Laboratoire de Chimie et de Biochimie Pharmacologiques et Toxicologiques, Université Paris Cité, F-75006Paris, France
| | - C Lucas-Torres
- CNRS, Laboratoire de Chimie et de Biochimie Pharmacologiques et Toxicologiques, Université Paris Cité, F-75006Paris, France
| | - N Giraud
- CNRS, Laboratoire de Chimie et de Biochimie Pharmacologiques et Toxicologiques, Université Paris Cité, F-75006Paris, France
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27
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Epasto LM, Honegger P, Che K, Kozak F, Jörg F, Schröder C, Kurzbach D. Nuclear Overhauser spectroscopy in hyperpolarized water - chemical vs. magnetic exchange. Chem Commun (Camb) 2022; 58:11661-11664. [PMID: 36169286 PMCID: PMC9578288 DOI: 10.1039/d2cc03735a] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/05/2022] [Accepted: 09/21/2022] [Indexed: 11/29/2022]
Abstract
Dissolution dynamic nuclear polarization (dDNP) is a versatile hyperpolarization technique to boost signal intensities in nuclear magnetic resonance (NMR) spectroscopy. The possibility to dissolve biomolecules in a hyperpolarized aqueous buffer under mild conditions has recently widened the scope of NMR by dDNP. The water-to-target hyperpolarization transfer mechanisms remain yet unclear, not least due to an often-encountered dilemma of dDNP experiments: The strongly enhanced signal intensities are accompanied by limited structural information as data acquisition is restricted to short time series of only one-dimensional spectra or a single correlation spectrum. Tackling this challenge, we combine dDNP with molecular dynamics (MD) simulations and predictions of cross-relaxation rates to unravel the spin dynamics of magnetization flow in hyperpolarized solutions.
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Affiliation(s)
- Ludovica Martina Epasto
- University of Vienna, Faculty of Chemistry, Department of Biological Chemistry, Währingerstr. 38, 1090 Vienna, Austria.
- University of Vienna, Doctoral School in Chemistry (DoSChem), Währingerstr. 42, 1090 Vienna, Austria
| | - Philipp Honegger
- University of Vienna, Faculty of Chemistry, Department of Computational Biological Chemistry, Währingerstr. 17, 1090 Vienna, Austria
- Department of Systems Biology, Harvard Medical School, 200 Longwood Avenue, Boston, MA 02115, USA
| | - Kateryna Che
- University of Vienna, Faculty of Chemistry, Department of Biological Chemistry, Währingerstr. 38, 1090 Vienna, Austria.
| | - Fanny Kozak
- University of Vienna, Faculty of Chemistry, Department of Biological Chemistry, Währingerstr. 38, 1090 Vienna, Austria.
- University of Vienna, Doctoral School in Chemistry (DoSChem), Währingerstr. 42, 1090 Vienna, Austria
| | - Florian Jörg
- University of Vienna, Doctoral School in Chemistry (DoSChem), Währingerstr. 42, 1090 Vienna, Austria
- University of Vienna, Faculty of Chemistry, Department of Computational Biological Chemistry, Währingerstr. 17, 1090 Vienna, Austria
| | - Christian Schröder
- University of Vienna, Faculty of Chemistry, Department of Computational Biological Chemistry, Währingerstr. 17, 1090 Vienna, Austria
| | - Dennis Kurzbach
- University of Vienna, Faculty of Chemistry, Department of Biological Chemistry, Währingerstr. 38, 1090 Vienna, Austria.
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28
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Theillet FX, Luchinat E. In-cell NMR: Why and how? PROGRESS IN NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY 2022; 132-133:1-112. [PMID: 36496255 DOI: 10.1016/j.pnmrs.2022.04.002] [Citation(s) in RCA: 19] [Impact Index Per Article: 9.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/15/2021] [Revised: 04/19/2022] [Accepted: 04/27/2022] [Indexed: 06/17/2023]
Abstract
NMR spectroscopy has been applied to cells and tissues analysis since its beginnings, as early as 1950. We have attempted to gather here in a didactic fashion the broad diversity of data and ideas that emerged from NMR investigations on living cells. Covering a large proportion of the periodic table, NMR spectroscopy permits scrutiny of a great variety of atomic nuclei in all living organisms non-invasively. It has thus provided quantitative information on cellular atoms and their chemical environment, dynamics, or interactions. We will show that NMR studies have generated valuable knowledge on a vast array of cellular molecules and events, from water, salts, metabolites, cell walls, proteins, nucleic acids, drugs and drug targets, to pH, redox equilibria and chemical reactions. The characterization of such a multitude of objects at the atomic scale has thus shaped our mental representation of cellular life at multiple levels, together with major techniques like mass-spectrometry or microscopies. NMR studies on cells has accompanied the developments of MRI and metabolomics, and various subfields have flourished, coined with appealing names: fluxomics, foodomics, MRI and MRS (i.e. imaging and localized spectroscopy of living tissues, respectively), whole-cell NMR, on-cell ligand-based NMR, systems NMR, cellular structural biology, in-cell NMR… All these have not grown separately, but rather by reinforcing each other like a braided trunk. Hence, we try here to provide an analytical account of a large ensemble of intricately linked approaches, whose integration has been and will be key to their success. We present extensive overviews, firstly on the various types of information provided by NMR in a cellular environment (the "why", oriented towards a broad readership), and secondly on the employed NMR techniques and setups (the "how", where we discuss the past, current and future methods). Each subsection is constructed as a historical anthology, showing how the intrinsic properties of NMR spectroscopy and its developments structured the accessible knowledge on cellular phenomena. Using this systematic approach, we sought i) to make this review accessible to the broadest audience and ii) to highlight some early techniques that may find renewed interest. Finally, we present a brief discussion on what may be potential and desirable developments in the context of integrative studies in biology.
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Affiliation(s)
- Francois-Xavier Theillet
- Université Paris-Saclay, CEA, CNRS, Institute for Integrative Biology of the Cell (I2BC), 91198 Gif-sur-Yvette, France.
| | - Enrico Luchinat
- Dipartimento di Scienze e Tecnologie Agro-Alimentari, Alma Mater Studiorum - Università di Bologna, Piazza Goidanich 60, 47521 Cesena, Italy; CERM - Magnetic Resonance Center, and Neurofarba Department, Università degli Studi di Firenze, 50019 Sesto Fiorentino, Italy
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29
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Dey A, Charrier B, Lemaitre K, Ribay V, Eshchenko D, Schnell M, Melzi R, Stern Q, Cousin S, Kempf J, Jannin S, Dumez JN, Giraudeau P. Fine optimization of a dissolution dynamic nuclear polarization experimental setting for 13C NMR of metabolic samples. MAGNETIC RESONANCE (GOTTINGEN, GERMANY) 2022; 3:183-202. [PMID: 37904870 PMCID: PMC10583282 DOI: 10.5194/mr-3-183-2022] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 07/12/2022] [Accepted: 09/16/2022] [Indexed: 11/01/2023]
Abstract
NMR-based analysis of metabolite mixtures provides crucial information on biological systems but mostly relies on 1D 1 H experiments for maximizing sensitivity. However, strong peak overlap of 1 H spectra often is a limitation for the analysis of inherently complex biological mixtures. Dissolution dynamic nuclear polarization (d-DNP) improves NMR sensitivity by several orders of magnitude, which enables 13 C NMR-based analysis of metabolites at natural abundance. We have recently demonstrated the successful introduction of d-DNP into a full untargeted metabolomics workflow applied to the study of plant metabolism. Here we describe the systematic optimization of d-DNP experimental settings for experiments at natural 13 C abundance and show how the resolution, sensitivity, and ultimately the number of detectable signals improve as a result. We have systematically optimized the parameters involved (in a semi-automated prototype d-DNP system, from sample preparation to signal detection, aiming at providing an optimization guide for potential users of such a system, who may not be experts in instrumental development). The optimization procedure makes it possible to detect previously inaccessible protonated 13 C signals of metabolites at natural abundance with at least 4 times improved line shape and a high repeatability compared to a previously reported d-DNP-enhanced untargeted metabolomic study. This extends the application scope of hyperpolarized 13 C NMR at natural abundance and paves the way to a more general use of DNP-hyperpolarized NMR in metabolomics studies.
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Affiliation(s)
- Arnab Dey
- Nantes Université, CNRS, CEISAM UMR 6230, 44000 Nantes, France
| | - Benoît Charrier
- Nantes Université, CNRS, CEISAM UMR 6230, 44000 Nantes, France
| | - Karine Lemaitre
- Nantes Université, CNRS, CEISAM UMR 6230, 44000 Nantes, France
| | - Victor Ribay
- Nantes Université, CNRS, CEISAM UMR 6230, 44000 Nantes, France
| | - Dmitry Eshchenko
- Bruker Biospin, Industriestrasse 26, 8117 Fällanden, Switzerland
| | - Marc Schnell
- Bruker Biospin, Industriestrasse 26, 8117 Fällanden, Switzerland
| | - Roberto Melzi
- Bruker Biospin, Viale V. Lancetti 43, 20158 Milan, Italy
| | - Quentin Stern
- Université de Lyon, CNRS, Université Claude Bernard Lyon 1,
ENS de Lyon, Centre de RMN à Très Hauts Champs (CRMN), UMR5082,
69100 Villeurbanne, France
| | | | | | - Sami Jannin
- Université de Lyon, CNRS, Université Claude Bernard Lyon 1,
ENS de Lyon, Centre de RMN à Très Hauts Champs (CRMN), UMR5082,
69100 Villeurbanne, France
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30
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Matsumoto N, Nishimura K, Kimizuka N, Nishiyama Y, Tateishi K, Uesaka T, Yanai N. Proton Hyperpolarization Relay from Nanocrystals to Liquid Water. J Am Chem Soc 2022; 144:18023-18029. [DOI: 10.1021/jacs.2c07518] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Naoto Matsumoto
- Department of Applied Chemistry, Graduate School of Engineering, Center for Molecular Systems, Kyushu University, 744 Moto-oka, Nishi-ku, Fukuoka 819-0395, Japan
| | - Koki Nishimura
- Department of Applied Chemistry, Graduate School of Engineering, Center for Molecular Systems, Kyushu University, 744 Moto-oka, Nishi-ku, Fukuoka 819-0395, Japan
| | - Nobuo Kimizuka
- Department of Applied Chemistry, Graduate School of Engineering, Center for Molecular Systems, Kyushu University, 744 Moto-oka, Nishi-ku, Fukuoka 819-0395, Japan
| | - Yusuke Nishiyama
- NanoCrystallography Unit, RIKEN-JEOL Collaboration Center, Tsurumi, Yokohama, Kanagawa 230-0045, Japan
- JEOL RESONANCE Inc., 3-1-2 Musashino, Akishima, Tokyo 196-8558, Japan
| | - Kenichiro Tateishi
- Cluster for Pioneering Research, RIKEN, RIKEN Nishina Center for Accelerator-Based Science, Wako, Saitama 351-0198, Japan
| | - Tomohiro Uesaka
- Cluster for Pioneering Research, RIKEN, RIKEN Nishina Center for Accelerator-Based Science, Wako, Saitama 351-0198, Japan
| | - Nobuhiro Yanai
- Department of Applied Chemistry, Graduate School of Engineering, Center for Molecular Systems, Kyushu University, 744 Moto-oka, Nishi-ku, Fukuoka 819-0395, Japan
- PRESTO and FOREST, JST, Honcho 4-1-8, Kawaguchi, Saitama 332-0012, Japan
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31
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Rao Y, Venkatesh A, Moutzouri P, Emsley L. 1H Hyperpolarization of Solutions by Overhauser Dynamic Nuclear Polarization with 13C- 1H Polarization Transfer. J Phys Chem Lett 2022; 13:7749-7755. [PMID: 35969266 PMCID: PMC9421900 DOI: 10.1021/acs.jpclett.2c01956] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/24/2022] [Accepted: 08/09/2022] [Indexed: 06/15/2023]
Abstract
Dynamic nuclear polarization (DNP) is a method that can significantly increase the sensitivity of nuclear magnetic resonance. The only effective DNP mechanism for in situ hyperpolarization in solution is Overhauser DNP, which is inefficient for 1H at high magnetic fields. Here we demonstrate the possibility of generating significant 1H hyperpolarization in solution at room temperature. To counter the poor direct 1H Overhauser DNP, we implement steady-state 13C Overhauser DNP in solutions and then transfer the 13C hyperpolarization to 1H via a reverse insensitive nuclei enhanced by polarization transfer scheme. We demonstrate this approach using a 400 MHz gyrotron-equipped 3.2 mm magic angle spinning DNP system to obtain 1H DNP enhancement factors of 48, 8, and 6 for chloroform, tetrachloroethane, and phenylacetylene, respectively, at room temperature.
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32
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Epasto LM, Che K, Kozak F, Selimovic A, Kadeřávek P, Kurzbach D. Toward protein NMR at physiological concentrations by hyperpolarized water-Finding and mapping uncharted conformational spaces. SCIENCE ADVANCES 2022; 8:eabq5179. [PMID: 35930648 PMCID: PMC9355353 DOI: 10.1126/sciadv.abq5179] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/13/2022] [Accepted: 06/23/2022] [Indexed: 05/12/2023]
Abstract
Nuclear magnetic resonance (NMR) spectroscopy is a key method for determining the structural dynamics of proteins in their native solution state. However, the low sensitivity of NMR typically necessitates nonphysiologically high sample concentrations, which often limit the relevance of the recorded data. We show how to use hyperpolarized water by dissolution dynamic nuclear polarization (DDNP) to acquire protein spectra at concentrations of 1 μM within seconds and with a high signal-to-noise ratio. The importance of approaching physiological concentrations is demonstrated for the vital MYC-associated factor X, which we show to switch conformations when diluted. While in vitro conditions lead to a population of the well-documented dimer, concentrations lowered by more than two orders of magnitude entail dimer dissociation and formation of a globularly folded monomer. We identified this structure by integrating DDNP with computational techniques to overcome the often-encountered constraint of DDNP of limited structural information provided by the typically detected one-dimensional spectra.
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Affiliation(s)
- Ludovica M. Epasto
- University of Vienna, Faculty of Chemistry, Institute of Biological Chemistry, Währinger Str. 38, 1090 Vienna, Austria
| | - Kateryna Che
- University of Vienna, Faculty of Chemistry, Institute of Biological Chemistry, Währinger Str. 38, 1090 Vienna, Austria
| | - Fanny Kozak
- University of Vienna, Faculty of Chemistry, Institute of Biological Chemistry, Währinger Str. 38, 1090 Vienna, Austria
| | - Albina Selimovic
- University of Vienna, Faculty of Chemistry, Institute of Biological Chemistry, Währinger Str. 38, 1090 Vienna, Austria
| | - Pavel Kadeřávek
- Masaryk University, CEITEC, Kamenice 5, 625 00 Brno, Czech Republic
| | - Dennis Kurzbach
- University of Vienna, Faculty of Chemistry, Institute of Biological Chemistry, Währinger Str. 38, 1090 Vienna, Austria
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33
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Negroni M, Guarin D, Che K, Epasto LM, Turhan E, Selimović A, Kozak F, Cousin S, Abergel D, Bodenhausen G, Kurzbach D. Inversion of Hyperpolarized 13C NMR Signals through Cross-Correlated Cross-Relaxation in Dissolution DNP Experiments. J Phys Chem B 2022; 126:4599-4610. [PMID: 35675502 PMCID: PMC9234958 DOI: 10.1021/acs.jpcb.2c03375] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/15/2022] [Revised: 05/25/2022] [Indexed: 11/29/2022]
Abstract
Dissolution dynamic nuclear polarization (DDNP) is a versatile tool to boost signal amplitudes in solution-state nuclear magnetic resonance (NMR) spectroscopy. For DDNP, nuclei are spin-hyperpolarized "ex situ" in a dedicated DNP device and then transferred to an NMR spectrometer for detection. Dramatic signal enhancements can be achieved, enabling shorter acquisition times, real-time monitoring of fast reactions, and reduced sample concentrations. Here, we show how the sample transfer in DDNP experiments can affect NMR spectra through cross-correlated cross-relaxation (CCR), especially in the case of low-field passages. Such processes can selectively invert signals of 13C spins in proton-carrying moieties. For their investigations, we use schemes for simultaneous or "parallel" detection of hyperpolarized 1H and 13C nuclei. We find that 1H → 13C CCR can invert signals of 13C spins if the proton polarization is close to 100%. We deduce that low-field passage in a DDNP experiment, a common occurrence due to the introduction of so-called "ultra-shielded" magnets, accelerates these effects due to field-dependent paramagnetic relaxation enhancements that can influence CCR. The reported effects are demonstrated for various molecules, laboratory layouts, and DDNP systems. As coupled 13C-1H spin systems are ubiquitous, we expect similar effects to be observed in various DDNP experiments. This might be exploited for selective spectroscopic labeling of hydrocarbons.
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Affiliation(s)
- Mattia Negroni
- Faculty
of Chemistry, Institute of Biological Chemistry, University Vienna, Währinger
Str. 38, 1090 Vienna, Austria
| | - David Guarin
- Athinoula
A. Martinos Center for Biomedical Imaging, Department of Radiology, Massachusetts General Hospital, Charlestown, Massachusetts 02129, United States
- Polarize
ApS, 1808 Frederiksberg, Denmark
| | - Kateryna Che
- Faculty
of Chemistry, Institute of Biological Chemistry, University Vienna, Währinger
Str. 38, 1090 Vienna, Austria
| | - Ludovica M. Epasto
- Faculty
of Chemistry, Institute of Biological Chemistry, University Vienna, Währinger
Str. 38, 1090 Vienna, Austria
| | - Ertan Turhan
- Faculty
of Chemistry, Institute of Biological Chemistry, University Vienna, Währinger
Str. 38, 1090 Vienna, Austria
| | - Albina Selimović
- Faculty
of Chemistry, Institute of Biological Chemistry, University Vienna, Währinger
Str. 38, 1090 Vienna, Austria
| | - Fanny Kozak
- Faculty
of Chemistry, Institute of Biological Chemistry, University Vienna, Währinger
Str. 38, 1090 Vienna, Austria
| | - Samuel Cousin
- Institut
de Chimie Radicalaire—UMR 7273, Saint-Jérôme
Campus, Av. Esc. Normandie Niemen, Aix-Marseille Université/CNRS, 13397 Marseille
Cedex 20, France
| | - Daniel Abergel
- Laboratoire
des Biomolécules, LBM, Département de chimie, École
Normale Supérieure, PSL University, Sorbonne Université,
CNRS, 24 rue Lhomond, 75005 Paris, France
| | - Geoffrey Bodenhausen
- Laboratoire
des Biomolécules, LBM, Département de chimie, École
Normale Supérieure, PSL University, Sorbonne Université,
CNRS, 24 rue Lhomond, 75005 Paris, France
| | - Dennis Kurzbach
- Faculty
of Chemistry, Institute of Biological Chemistry, University Vienna, Währinger
Str. 38, 1090 Vienna, Austria
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34
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Lhoste C, Lorandel B, Praud C, Marchand A, Mishra R, Dey A, Bernard A, Dumez JN, Giraudeau P. Ultrafast 2D NMR for the analysis of complex mixtures. PROGRESS IN NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY 2022; 130-131:1-46. [PMID: 36113916 DOI: 10.1016/j.pnmrs.2022.01.002] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/12/2021] [Revised: 01/21/2022] [Accepted: 01/23/2022] [Indexed: 06/15/2023]
Abstract
2D NMR is extensively used in many different fields, and its potential for the study of complex biochemical or chemical mixtures has been widely demonstrated. 2D NMR gives the ability to resolve peaks that overlap in 1D spectra, while providing both structural and quantitative information. However, complex mixtures are often analysed in situations where the data acquisition time is a crucial limitation, due to an ongoing chemical reaction or a moving sample from a hyphenated technique, or to the high-throughput requirement associated with large sample collections. Among the great diversity of available fast 2D methods, ultrafast (or single-scan) 2D NMR is probably the most general and versatile approach for complex mixture analysis. Indeed, ultrafast NMR has undergone an impressive number of methodological developments that have helped turn it into an efficient analytical tool, and numerous applications to the analysis of mixtures have been reported. This review first summarizes the main concepts, features and practical limitations of ultrafast 2D NMR, as well as the methodological developments that improved its analytical potential. Then, a detailed description of the main applications of ultrafast 2D NMR to mixture analysis is given. The two major application fields of ultrafast 2D NMR are first covered, i.e., reaction/process monitoring and metabolomics. Then, the potential of ultrafast 2D NMR for the analysis of hyperpolarized mixtures is described, as well as recent developments in oriented media. This review focuses on high-resolution liquid-state 2D experiments (including benchtop NMR) that include at least one spectroscopic dimension (i.e., 2D spectroscopy and DOSY) but does not cover in depth applications without spectral resolution and/or in inhomogeneous fields.
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Affiliation(s)
- Célia Lhoste
- Nantes Université, CNRS, CEISAM UMR 6230, Nantes F-44000, France
| | | | - Clément Praud
- Nantes Université, CNRS, CEISAM UMR 6230, Nantes F-44000, France
| | - Achille Marchand
- Nantes Université, CNRS, CEISAM UMR 6230, Nantes F-44000, France
| | - Rituraj Mishra
- Nantes Université, CNRS, CEISAM UMR 6230, Nantes F-44000, France
| | - Arnab Dey
- Nantes Université, CNRS, CEISAM UMR 6230, Nantes F-44000, France
| | - Aurélie Bernard
- Nantes Université, CNRS, CEISAM UMR 6230, Nantes F-44000, France
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Hilty C, Kurzbach D, Frydman L. Hyperpolarized water as universal sensitivity booster in biomolecular NMR. Nat Protoc 2022; 17:1621-1657. [PMID: 35546640 DOI: 10.1038/s41596-022-00693-8] [Citation(s) in RCA: 17] [Impact Index Per Article: 8.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/04/2021] [Accepted: 02/25/2022] [Indexed: 11/09/2022]
Abstract
NMR spectroscopy is the only method to access the structural dynamics of biomolecules at high (atomistic) resolution in their native solution state. However, this method's low sensitivity has two important consequences: (i) typically experiments have to be performed at high concentrations that increase sensitivity but are not physiological, and (ii) signals have to be accumulated over long periods, complicating the determination of interaction kinetics on the order of seconds and impeding studies of unstable systems. Both limitations are of equal, fundamental relevance: non-native conditions are of limited pharmacological relevance, and the function of proteins, enzymes and nucleic acids often relies on their interaction kinetics. To overcome these limitations, we have developed applications that involve 'hyperpolarized water' to boost signal intensities in NMR of proteins and nucleic acids. The technique includes four stages: (i) preparation of the biomolecule in partially deuterated buffers, (ii) preparation of 'hyperpolarized' water featuring enhanced 1H NMR signals via cryogenic dynamic nuclear polarization, (iii) sudden melting of the cryogenic pellet and dissolution of the protein or nucleic acid in the hyperpolarized water (enabling spontaneous exchanges of protons between water and target) and (iv) recording signal-amplified NMR spectra targeting either labile 1H or neighboring 15N/13C nuclei in the biomolecule. Water in the ensuing experiments is used as a universal 'hyperpolarization' agent, rendering the approach versatile and applicable to any biomolecule possessing labile hydrogens. Thus, questions can be addressed, ranging from protein and RNA folding problems to resolving structure-function relationships of intrinsically disordered proteins to investigating membrane interactions.
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Affiliation(s)
- Christian Hilty
- Chemistry Department, Texas A&M University, College Station, TX, USA.
| | - Dennis Kurzbach
- Faculty of Chemistry, Institute for Biological Chemistry, University of Vienna, Vienna, Austria.
| | - Lucio Frydman
- Department of Chemical and Biological Physics, Weizmann Institute of Science, Rehovot, Israel.
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Tan KO, Griffin RG. Observation of a Four-Spin Solid Effect. J Chem Phys 2022; 156:174201. [PMID: 35525661 PMCID: PMC9068241 DOI: 10.1063/5.0091663] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022] Open
Abstract
The two-spin solid effect (2SSE) is one of the established continuous wave dynamic nuclear polarization mechanisms that enables enhancement of nuclear magnetic resonance signals. It functions via a state-mixing mechanism that mediates the excitation of forbidden transitions in an electron–nuclear spin system. Specifically, microwave irradiation at frequencies ωμw ∼ ω0S ± ω0I, where ω0S and ω0I are electron and nuclear Larmor frequencies, respectively, yields enhanced nuclear spin polarization. Following the recent rediscovery of the three-spin solid effect (3SSE) [Tan et al., Sci. Adv. 5, eaax2743 (2019)], where the matching condition is given by ωμw = ω0S ± 2ω0I, we report here the first direct observation of the four-spin solid effect (4SSE) at ωμw = ω0S ± 3ω0I. The forbidden double- and quadruple-quantum transitions were observed in samples containing trityl radicals dispersed in a glycerol–water mixture at 0.35 T/15 MHz/9.8 GHz and 80 K. We present a derivation of the 4SSE effective Hamiltonian, matching conditions, and transition probabilities. Finally, we show that the experimental observations agree with the results from numerical simulations and analytical theory.
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Affiliation(s)
| | - Robert G. Griffin
- Francis Bitter Magnet Laboratory, Massachusetts Institute of Technology, United States of America
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Koptyug IV, Stern Q, Jannin S, Elliott SJ. Frozen water NMR lineshape analysis enables absolute polarization quantification. Phys Chem Chem Phys 2022; 24:5956-5964. [PMID: 35195621 DOI: 10.1039/d1cp05127j] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Typical magnetic resonance experiments are routinely limited by weak signal responses. In some cases, the low intrinsic sensitivity can be alleviated by the implementation of hyperpolarization technologies. Dissolution-dynamic nuclear polarization offers a means of hyperpolarizing small molecules. Hyperpolarized water is employed in several dynamic nuclear polarization studies, and hence accurate and rapid quantification of the 1H polarization level is of utmost importance. The solid-state nuclear magnetic resonance spectrum of water acquired under dissolution-dynamic nuclear polarization conditions has revealed lineshapes which become asymmetric at high levels of 1H polarization, which is an interesting fundamental problem in itself, but also complicates data interpretation and can prevent correct estimations of polarization levels achieved. In previous studies, attempts to simulate the 1H spectral lineshape of water as a function of the 1H polarization led to significant disagreement with the experimental results. Here we propose and demonstrate that such simulations, and therefore polarization quantification, can be implemented accurately, in particular by taking into account the detector dead time during 1H signal acquisition that can lead to severe spectral distortions. Based on these findings, we employed an echo-based radiofrequency pulse sequence to achieve distortion-free 1H spectra of hyperpolarized water, and adequate simulations of these echo-based spectra were implemented to extract the absolute 1H polarization level from the hyperpolarized water signal only, thus alleviating the need for lengthy and insensitive measurements of thermal equilibrium signals.
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Affiliation(s)
- Igor V Koptyug
- International Tomography Center, SB RAS, 3A Institutskaya St., Novosibirsk, 630090, Russia
| | - Quentin Stern
- Univ. Lyon, CNRS, ENS Lyon, UCBL, Université de Lyon, CRMN UMR 5280, 69100 Villeurbanne, France.
| | - Sami Jannin
- Univ. Lyon, CNRS, ENS Lyon, UCBL, Université de Lyon, CRMN UMR 5280, 69100 Villeurbanne, France.
| | - Stuart J Elliott
- Univ. Lyon, CNRS, ENS Lyon, UCBL, Université de Lyon, CRMN UMR 5280, 69100 Villeurbanne, France.
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38
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Eills J, Hale W, Utz M. Synergies between Hyperpolarized NMR and Microfluidics: A Review. PROGRESS IN NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY 2022; 128:44-69. [PMID: 35282869 DOI: 10.1016/j.pnmrs.2021.09.001] [Citation(s) in RCA: 13] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/25/2021] [Revised: 09/10/2021] [Accepted: 09/11/2021] [Indexed: 06/14/2023]
Abstract
Hyperpolarized nuclear magnetic resonance and lab-on-a-chip microfluidics are two dynamic, but until recently quite distinct, fields of research. Recent developments in both areas increased their synergistic overlap. By microfluidic integration, many complex experimental steps can be brought together onto a single platform. Microfluidic devices are therefore increasingly finding applications in medical diagnostics, forensic analysis, and biomedical research. In particular, they provide novel and powerful ways to culture cells, cell aggregates, and even functional models of entire organs. Nuclear magnetic resonance is a non-invasive, high-resolution spectroscopic technique which allows real-time process monitoring with chemical specificity. It is ideally suited for observing metabolic and other biological and chemical processes in microfluidic systems. However, its intrinsically low sensitivity has limited its application. Recent advances in nuclear hyperpolarization techniques may change this: under special circumstances, it is possible to enhance NMR signals by up to 5 orders of magnitude, which dramatically extends the utility of NMR in the context of microfluidic systems. Hyperpolarization requires complex chemical and/or physical manipulations, which in turn may benefit from microfluidic implementation. In fact, many hyperpolarization methodologies rely on processes that are more efficient at the micro-scale, such as molecular diffusion, penetration of electromagnetic radiation into a sample, or restricted molecular mobility on a surface. In this review we examine the confluence between the fields of hyperpolarization-enhanced NMR and microfluidics, and assess how these areas of research have mutually benefited one another, and will continue to do so.
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Affiliation(s)
- James Eills
- Institute for Physics, Johannes Gutenberg University, D-55090 Mainz, Germany; GSI Helmholtzzentrum für Schwerionenforschung GmbH, Helmholtz-Institut Mainz, 55128 Mainz, Germany.
| | - William Hale
- Department of Chemistry, University of Florida, 32611, USA
| | - Marcel Utz
- School of Chemistry, University of Southampton, SO17 1BJ, UK.
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Fujiwara S, Matsumoto N, Nishimura K, Kimizuka N, Tateishi K, Uesaka T, Yanai N. Triplet Dynamic Nuclear Polarization of Guest Molecules through Induced Fit in a Flexible Metal–Organic Framework**. Angew Chem Int Ed Engl 2022. [DOI: 10.1002/ange.202115792] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Affiliation(s)
- Saiya Fujiwara
- Department of Applied Chemistry Graduate School of Engineering Center for Molecular Systems (CMS) Kyushu University 744 Moto-oka Nishi-ku, Fukuoka 819-0395 Japan
| | - Naoto Matsumoto
- Department of Applied Chemistry Graduate School of Engineering Center for Molecular Systems (CMS) Kyushu University 744 Moto-oka Nishi-ku, Fukuoka 819-0395 Japan
| | - Koki Nishimura
- Department of Applied Chemistry Graduate School of Engineering Center for Molecular Systems (CMS) Kyushu University 744 Moto-oka Nishi-ku, Fukuoka 819-0395 Japan
| | - Nobuo Kimizuka
- Department of Applied Chemistry Graduate School of Engineering Center for Molecular Systems (CMS) Kyushu University 744 Moto-oka Nishi-ku, Fukuoka 819-0395 Japan
| | - Kenichiro Tateishi
- Cluster for Pioneering Research RIKEN RIKEN Nishina Center for Accelerator-Based Science Wako, Saitama 351-0198 Japan
| | - Tomohiro Uesaka
- Cluster for Pioneering Research RIKEN RIKEN Nishina Center for Accelerator-Based Science Wako, Saitama 351-0198 Japan
| | - Nobuhiro Yanai
- Department of Applied Chemistry Graduate School of Engineering Center for Molecular Systems (CMS) Kyushu University 744 Moto-oka Nishi-ku, Fukuoka 819-0395 Japan
- PRESTO JST Honcho 4-1-8 Kawaguchi, Saitama 332-0012 Japan
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40
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Fujiwara S, Matsumoto N, Nishimura K, Kimizuka N, Tateishi K, Uesaka T, Yanai N. Triplet Dynamic Nuclear Polarization of Guest Molecules through Induced Fit in a Flexible Metal-Organic Framework. Angew Chem Int Ed Engl 2021; 61:e202115792. [PMID: 34935275 DOI: 10.1002/anie.202115792] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/19/2021] [Indexed: 11/12/2022]
Abstract
Dynamic nuclear polarization utilizing photoexcited triplet electrons (triplet-DNP) has great potential for room-temperature hyperpolarization of nuclear spins. However, the polarization transfer to molecules of interest remains a challenge due to the fast spin relaxation and weak interaction with target molecules at room temperature in conventional host materials. Here, we demonstrate the first example of DNP of guest molecules in a porous material at around room temperature by utilizing the induced-fit-type structural transformation of a crystalline yet flexible metal-organic framework (MOF). In contrast to the usual hosts, 1 H spin-lattice relaxation time becomes longer by accommodating a pharmaceutical model target 5-fluorouracil as the flexible MOF changes its structure upon guest accommodation to maximize the host-guest interactions. Combined with triplet-DNP and cross-polarization (CP), this system realizes an enhanced 19 F-NMR signal of guest target molecules.
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Affiliation(s)
- Saiya Fujiwara
- Kyushu University: Kyushu Daigaku, Department of Applied Chemistry, JAPAN
| | - Naoto Matsumoto
- Kyushu University: Kyushu Daigaku, Department of Applied Chemistry, JAPAN
| | - Koki Nishimura
- Kyushu University: Kyushu Daigaku, Department of Applied Chemistry, JAPAN
| | - Nobuo Kimizuka
- Kyushu University: Kyushu Daigaku, Department of Applied Chemistry, JAPAN
| | | | - Tomohiro Uesaka
- RIKEN: Rikagaku Kenkyujo, Cluster for Pioneering Research, JAPAN
| | - Nobuhiro Yanai
- Kyushu University, Department of Chemistry and Biochemistry, 744 Moto-oka, Nishi-ku, 819-0395, Fukuoka, JAPAN
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41
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Dai D, Wang X, Liu Y, Yang XL, Glaubitz C, Denysenkov V, He X, Prisner T, Mao J. Room-temperature dynamic nuclear polarization enhanced NMR spectroscopy of small biological molecules in water. Nat Commun 2021; 12:6880. [PMID: 34824218 PMCID: PMC8616939 DOI: 10.1038/s41467-021-27067-0] [Citation(s) in RCA: 14] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/03/2021] [Accepted: 11/01/2021] [Indexed: 11/15/2022] Open
Abstract
Nuclear magnetic resonance (NMR) spectroscopy is a powerful and popular technique for probing the molecular structures, dynamics and chemical properties. However the conventional NMR spectroscopy is bottlenecked by its low sensitivity. Dynamic nuclear polarization (DNP) boosts NMR sensitivity by orders of magnitude and resolves this limitation. In liquid-state this revolutionizing technique has been restricted to a few specific non-biological model molecules in organic solvents. Here we show that the carbon polarization in small biological molecules, including carbohydrates and amino acids, can be enhanced sizably by in situ Overhauser DNP (ODNP) in water at room temperature and at high magnetic field. An observed connection between ODNP 13C enhancement factor and paramagnetic 13C NMR shift has led to the exploration of biologically relevant heterocyclic compound indole. The QM/MM MD simulation underscores the dynamics of intermolecular hydrogen bonds as the driving force for the scalar ODNP in a long-living radical-substrate complex. Our work reconciles results obtained by DNP spectroscopy, paramagnetic NMR and computational chemistry and provides new mechanistic insights into the high-field scalar ODNP.
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Affiliation(s)
- Danhua Dai
- Institute of Physical and Theoretical Chemistry, Goethe University Frankfurt, 60438, Frankfurt am Main, Germany
- Center for Biomolecular Magnetic Resonance, Goethe University Frankfurt, 60438, Frankfurt am Main, Germany
| | - Xianwei Wang
- Shanghai Engineering Research Center of Molecular Therapeutics and New Drug Development, School of Chemistry and Molecular Engineering, East China Normal University, Shanghai, 200062, China
- College of Science, Zhejiang University of Technology, Hangzhou, Zhejiang, 310023, China
| | - Yiwei Liu
- Shanghai Engineering Research Center of Molecular Therapeutics and New Drug Development, School of Chemistry and Molecular Engineering, East China Normal University, Shanghai, 200062, China
| | - Xiao-Liang Yang
- Jiangsu Key Laboratory of Advanced Organic Materials, School of Chemistry and Chemical Engineering, Nanjing University, Nanjing, 210023, China
- State Key Laboratory of Coordination Chemistry, School of Chemistry and Chemical Engineering, Nanjing University, Nanjing, 210023, China
| | - Clemens Glaubitz
- Center for Biomolecular Magnetic Resonance, Goethe University Frankfurt, 60438, Frankfurt am Main, Germany
- Institute of Biophysical Chemistry, Goethe University Frankfurt, 60438, Frankfurt am Main, Germany
| | - Vasyl Denysenkov
- Institute of Physical and Theoretical Chemistry, Goethe University Frankfurt, 60438, Frankfurt am Main, Germany
- Center for Biomolecular Magnetic Resonance, Goethe University Frankfurt, 60438, Frankfurt am Main, Germany
| | - Xiao He
- Shanghai Engineering Research Center of Molecular Therapeutics and New Drug Development, School of Chemistry and Molecular Engineering, East China Normal University, Shanghai, 200062, China.
- NYU-ECNU Center for Computational Chemistry at NYU Shanghai, Shanghai, 200062, China.
| | - Thomas Prisner
- Institute of Physical and Theoretical Chemistry, Goethe University Frankfurt, 60438, Frankfurt am Main, Germany
- Center for Biomolecular Magnetic Resonance, Goethe University Frankfurt, 60438, Frankfurt am Main, Germany
| | - Jiafei Mao
- Center for Biomolecular Magnetic Resonance, Goethe University Frankfurt, 60438, Frankfurt am Main, Germany.
- Institute of Biophysical Chemistry, Goethe University Frankfurt, 60438, Frankfurt am Main, Germany.
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42
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Kouřil K, Gramberg M, Jurkutat M, Kouřilová H, Meier B. A cryogen-free, semi-automated apparatus for bullet-dynamic nuclear polarization with improved resolution. MAGNETIC RESONANCE (GOTTINGEN, GERMANY) 2021; 2:815-825. [PMID: 37905208 PMCID: PMC10539728 DOI: 10.5194/mr-2-815-2021] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/06/2021] [Accepted: 10/20/2021] [Indexed: 11/01/2023]
Abstract
In dissolution-dynamic nuclear polarization, a hyperpolarized solid is dissolved with a jet of hot solvent. The solution is then transferred to a secondary magnet, where spectra can be recorded with improved sensitivity. In bullet-dynamic nuclear polarization this order is reversed. Pressurized gas is used to rapidly transfer the hyperpolarized solid to the secondary magnet, and the hyperpolarized solid is dissolved only upon arrival. A potential advantage of this approach is that it may avoid excessive dilution and the associated signal loss, in particular for small sample quantities. Previously, we have shown that liquid-state NMR spectra with polarization levels of up to 30 % may be recorded within less than 1 s after the departure of the hyperpolarized solid from the polarizing magnet. The resolution of the recorded spectra however was limited. The system consumed significant amounts of liquid helium, and substantial manual work was required in between experiments to prepare for the next shot. Here, we present a new bullet-DNP (dynamic nuclear polarization) system that addresses these limitations.
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Affiliation(s)
- Karel Kouřil
- Institute for Biological Interfaces 4, Karlsruhe Institute of Technology, Karlsruhe, Germany
| | - Michel Gramberg
- Institute for Biological Interfaces 4, Karlsruhe Institute of Technology, Karlsruhe, Germany
| | - Michael Jurkutat
- Institute for Biological Interfaces 4, Karlsruhe Institute of Technology, Karlsruhe, Germany
| | - Hana Kouřilová
- Institute for Biological Interfaces 4, Karlsruhe Institute of Technology, Karlsruhe, Germany
| | - Benno Meier
- Institute for Biological Interfaces 4, Karlsruhe Institute of Technology, Karlsruhe, Germany
- Institute of Organic Chemistry, Karlsruhe Institute of Technology, Karlsruhe, Germany
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43
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Residue-resolved monitoring of protein hyperpolarization at sub-second time resolution. Commun Chem 2021; 4:147. [PMID: 36697662 PMCID: PMC9814832 DOI: 10.1038/s42004-021-00587-y] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/20/2021] [Accepted: 10/05/2021] [Indexed: 02/07/2023] Open
Abstract
Signal-enhancement techniques for NMR spectroscopy are important to amplify the weak resonances provided by nuclear spins. Recently, 'hyperpolarization' techniques have been intensively investigated. These provide nuclear spin states far from equilibrium yielding strong signal boosts up to four orders of magnitude. Here we propose a method for real-time NMR of 'hyperpolarized' proteins at residue resolution. The approach is based on dissolution dynamic nuclear polarization (d-DNP), which enables the use of hyperpolarized buffers that selectively boost NMR signals of solvent-exposed protein residues. The resulting spectral sparseness and signal enhancements enable recording of residue-resolved spectra at a 2 Hz sampling rate. Thus, we monitor the hyperpolarization level of different protein residues simultaneously under near-physiological conditions. We aim to address two points: 1) NMR experiments are often performed under conditions that increase sensitivity but are physiologically irrelevant; 2) long signal accumulation impedes fast real-time monitoring. Both limitations are of fundamental relevance to ascertain pharmacological relevance and study protein kinetics.
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44
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Vogl DP, Conibear AC, Becker CFW. Segmental and site-specific isotope labelling strategies for structural analysis of posttranslationally modified proteins. RSC Chem Biol 2021; 2:1441-1461. [PMID: 34704048 PMCID: PMC8496066 DOI: 10.1039/d1cb00045d] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/07/2021] [Accepted: 08/11/2021] [Indexed: 01/02/2023] Open
Abstract
Posttranslational modifications can alter protein structures, functions and locations, and are important cellular regulatory and signalling mechanisms. Spectroscopic techniques such as nuclear magnetic resonance, infrared and Raman spectroscopy, as well as small-angle scattering, can provide insights into the structural and dynamic effects of protein posttranslational modifications and their impact on interactions with binding partners. However, heterogeneity of modified proteins from natural sources and spectral complexity often hinder analyses, especially for large proteins and macromolecular assemblies. Selective labelling of proteins with stable isotopes can greatly simplify spectra, as one can focus on labelled residues or segments of interest. Employing chemical biology tools for modifying and isotopically labelling proteins with atomic precision provides access to unique protein samples for structural biology and spectroscopy. Here, we review site-specific and segmental isotope labelling methods that are employed in combination with chemical and enzymatic tools to access posttranslationally modified proteins. We discuss illustrative examples in which these methods have been used to facilitate spectroscopic studies of posttranslationally modified proteins, providing new insights into biology.
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Affiliation(s)
- Dominik P Vogl
- University of Vienna, Faculty of Chemistry, Institute of Biological Chemistry Währinger Straße 38 1090 Vienna Austria +43-1-4277-870510 +43-1-4277-70510
| | - Anne C Conibear
- The University of Queensland, School of Biomedical Sciences St Lucia Brisbane 4072 QLD Australia
| | - Christian F W Becker
- University of Vienna, Faculty of Chemistry, Institute of Biological Chemistry Währinger Straße 38 1090 Vienna Austria +43-1-4277-870510 +43-1-4277-70510
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45
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Elliott SJ, Stern Q, Ceillier M, El Daraï T, Cousin SF, Cala O, Jannin S. Practical dissolution dynamic nuclear polarization. PROGRESS IN NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY 2021; 126-127:59-100. [PMID: 34852925 DOI: 10.1016/j.pnmrs.2021.04.002] [Citation(s) in RCA: 24] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/06/2021] [Accepted: 04/09/2021] [Indexed: 06/13/2023]
Abstract
This review article intends to provide insightful advice for dissolution-dynamic nuclear polarization in the form of a practical handbook. The goal is to aid research groups to effectively perform such experiments in their own laboratories. Previous review articles on this subject have covered a large number of useful topics including instrumentation, experimentation, theory, etc. The topics to be addressed here will include tips for sample preparation and for checking sample health; a checklist to correctly diagnose system faults and perform general maintenance; the necessary mechanical requirements regarding sample dissolution; and aids for accurate, fast and reliable polarization quantification. Herein, the challenges and limitations of each stage of a typical dissolution-dynamic nuclear polarization experiment are presented, with the focus being on how to quickly and simply overcome some of the limitations often encountered in the laboratory.
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Affiliation(s)
- Stuart J Elliott
- Centre de Résonance Magnétique Nucléaire à Très Hauts Champs - UMR 5082 Université de Lyon, CNRS, Université Claude Bernard Lyon 1, ENS de Lyon, 5 Rue de la Doua, 69100 Villeurbanne, France
| | - Quentin Stern
- Centre de Résonance Magnétique Nucléaire à Très Hauts Champs - UMR 5082 Université de Lyon, CNRS, Université Claude Bernard Lyon 1, ENS de Lyon, 5 Rue de la Doua, 69100 Villeurbanne, France
| | - Morgan Ceillier
- Centre de Résonance Magnétique Nucléaire à Très Hauts Champs - UMR 5082 Université de Lyon, CNRS, Université Claude Bernard Lyon 1, ENS de Lyon, 5 Rue de la Doua, 69100 Villeurbanne, France
| | - Théo El Daraï
- Centre de Résonance Magnétique Nucléaire à Très Hauts Champs - UMR 5082 Université de Lyon, CNRS, Université Claude Bernard Lyon 1, ENS de Lyon, 5 Rue de la Doua, 69100 Villeurbanne, France
| | - Samuel F Cousin
- Centre de Résonance Magnétique Nucléaire à Très Hauts Champs - UMR 5082 Université de Lyon, CNRS, Université Claude Bernard Lyon 1, ENS de Lyon, 5 Rue de la Doua, 69100 Villeurbanne, France
| | - Olivier Cala
- Centre de Résonance Magnétique Nucléaire à Très Hauts Champs - UMR 5082 Université de Lyon, CNRS, Université Claude Bernard Lyon 1, ENS de Lyon, 5 Rue de la Doua, 69100 Villeurbanne, France
| | - Sami Jannin
- Centre de Résonance Magnétique Nucléaire à Très Hauts Champs - UMR 5082 Université de Lyon, CNRS, Université Claude Bernard Lyon 1, ENS de Lyon, 5 Rue de la Doua, 69100 Villeurbanne, France.
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46
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Korchak S, Kaltschnee L, Dervisoglu R, Andreas L, Griesinger C, Glöggler S. Spontaneous Enhancement of Magnetic Resonance Signals Using a RASER. Angew Chem Int Ed Engl 2021; 60:20984-20990. [PMID: 34289241 PMCID: PMC8518078 DOI: 10.1002/anie.202108306] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/22/2021] [Indexed: 11/06/2022]
Abstract
Nuclear magnetic resonance is usually drastically limited by its intrinsically low sensitivity: Only a few spins contribute to the overall signal. To overcome this limitation, hyperpolarization methods were developed that increase signals several times beyond the normal/thermally polarized signals. The ideal case would be a universal approach that can signal enhance the complete sample of interest in solution to increase detection sensitivity. Here, we introduce a combination of para-hydrogen enhanced magnetic resonance with the phenomenon of the RASER: Large signals of para-hydrogen enhanced molecules interact with the magnetic resonance coil in a way that the signal is spontaneously converted into an in-phase signal. These molecules directly interact with other compounds via dipolar couplings and enhance their signal. We demonstrate that this is not only possible for solvent molecules but also for an amino acid.
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Affiliation(s)
- Sergey Korchak
- NMR Signal Enhancement GroupMax Planck Institute for Biophysical ChemistryAm Fassberg 1137077GöttingenGermany
- Center for Biostructural Imaging of Neurodegeneration of UMGVon-Siebold-Str. 3A37075GöttingenGermany
| | - Lukas Kaltschnee
- NMR Signal Enhancement GroupMax Planck Institute for Biophysical ChemistryAm Fassberg 1137077GöttingenGermany
- Center for Biostructural Imaging of Neurodegeneration of UMGVon-Siebold-Str. 3A37075GöttingenGermany
| | - Riza Dervisoglu
- Research Group for Solid State NMRMax Planck Institute for Biophysical ChemistryAm Fassberg 1137077GöttingenGermany
| | - Loren Andreas
- Research Group for Solid State NMRMax Planck Institute for Biophysical ChemistryAm Fassberg 1137077GöttingenGermany
| | - Christian Griesinger
- Department of NMR-based Structural BiologyMax Planck Institute for Biophysical ChemistryAm Fassberg 1137077GöttingenGermany
| | - Stefan Glöggler
- NMR Signal Enhancement GroupMax Planck Institute for Biophysical ChemistryAm Fassberg 1137077GöttingenGermany
- Center for Biostructural Imaging of Neurodegeneration of UMGVon-Siebold-Str. 3A37075GöttingenGermany
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47
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Korchak S, Kaltschnee L, Dervisoglu R, Andreas L, Griesinger C, Glöggler S. Spontaneous Enhancement of Magnetic Resonance Signals Using a RASER. Angew Chem Int Ed Engl 2021. [DOI: 10.1002/ange.202108306] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Affiliation(s)
- Sergey Korchak
- NMR Signal Enhancement Group Max Planck Institute for Biophysical Chemistry Am Fassberg 11 37077 Göttingen Germany
- Center for Biostructural Imaging of Neurodegeneration of UMG Von-Siebold-Str. 3A 37075 Göttingen Germany
| | - Lukas Kaltschnee
- NMR Signal Enhancement Group Max Planck Institute for Biophysical Chemistry Am Fassberg 11 37077 Göttingen Germany
- Center for Biostructural Imaging of Neurodegeneration of UMG Von-Siebold-Str. 3A 37075 Göttingen Germany
| | - Riza Dervisoglu
- Research Group for Solid State NMR Max Planck Institute for Biophysical Chemistry Am Fassberg 11 37077 Göttingen Germany
| | - Loren Andreas
- Research Group for Solid State NMR Max Planck Institute for Biophysical Chemistry Am Fassberg 11 37077 Göttingen Germany
| | - Christian Griesinger
- Department of NMR-based Structural Biology Max Planck Institute for Biophysical Chemistry Am Fassberg 11 37077 Göttingen Germany
| | - Stefan Glöggler
- NMR Signal Enhancement Group Max Planck Institute for Biophysical Chemistry Am Fassberg 11 37077 Göttingen Germany
- Center for Biostructural Imaging of Neurodegeneration of UMG Von-Siebold-Str. 3A 37075 Göttingen Germany
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48
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Them K, Ellermann F, Pravdivtsev AN, Salnikov OG, Skovpin IV, Koptyug IV, Herges R, Hövener JB. Parahydrogen-Induced Polarization Relayed via Proton Exchange. J Am Chem Soc 2021; 143:13694-13700. [PMID: 34406748 DOI: 10.1021/jacs.1c05254] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/02/2023]
Abstract
The hyperpolarization of nuclear spins is a game-changing technology that enables hitherto inaccessible applications for magnetic resonance in chemistry and biomedicine. Despite significant advances and discoveries in the past, however, the quest to establish efficient and effective hyperpolarization methods continues. Here, we describe a new method that combines the advantages of direct parahydrogenation, high polarization (P), fast reaction, and low cost with the broad applicability of polarization transfer via proton exchange. We identified the system propargyl alcohol + pH2 → allyl alcohol to yield 1H polarization in excess of P ≈ 13% by using only 50% enriched pH2 at a pressure of ≈1 bar. The polarization was then successfully relayed via proton exchange from allyl alcohol to various target molecules. The polarizations of water and alcohols (as target molecules) approached P ≈ 1% even at high molar concentrations of 100 mM. Lactate, glucose, and pyruvic acid were also polarized, but to a lesser extent. Several potential improvements of the methodology are discussed. Thus, the parahydrogen-induced hyperpolarization relayed via proton exchange (PHIP-X) is a promising approach to polarize numerous molecules which participate in proton exchange and support new applications for magnetic resonance.
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Affiliation(s)
- Kolja Them
- Section Biomedical Imaging, Molecular Imaging North Competence Center (MOIN CC), Department of Radiology and Neuroradiology, University Medical Center Schleswig-Holstein and Kiel University, Am Botanischen Garten 14, 24118 Kiel, Germany
| | - Frowin Ellermann
- Section Biomedical Imaging, Molecular Imaging North Competence Center (MOIN CC), Department of Radiology and Neuroradiology, University Medical Center Schleswig-Holstein and Kiel University, Am Botanischen Garten 14, 24118 Kiel, Germany
| | - Andrey N Pravdivtsev
- Section Biomedical Imaging, Molecular Imaging North Competence Center (MOIN CC), Department of Radiology and Neuroradiology, University Medical Center Schleswig-Holstein and Kiel University, Am Botanischen Garten 14, 24118 Kiel, Germany
| | - Oleg G Salnikov
- International Tomography Center, SB RAS, 3A Institutskaya st., Novosibirsk 630090, Russia.,Novosibirsk State University, 2 Pirogova st., Novosibirsk 630090, Russia.,Boreskov Institute of Catalysis SB RAS, 4 Acad. Lavrentiev pr., Novosibirsk 630090, Russia
| | - Ivan V Skovpin
- International Tomography Center, SB RAS, 3A Institutskaya st., Novosibirsk 630090, Russia.,Novosibirsk State University, 2 Pirogova st., Novosibirsk 630090, Russia
| | - Igor V Koptyug
- International Tomography Center, SB RAS, 3A Institutskaya st., Novosibirsk 630090, Russia.,Novosibirsk State University, 2 Pirogova st., Novosibirsk 630090, Russia
| | - Rainer Herges
- Otto-Diels-Institute for Organic Chemistry, Christian-Albrechts-University, 24118 Kiel, Germany
| | - Jan-Bernd Hövener
- Section Biomedical Imaging, Molecular Imaging North Competence Center (MOIN CC), Department of Radiology and Neuroradiology, University Medical Center Schleswig-Holstein and Kiel University, Am Botanischen Garten 14, 24118 Kiel, Germany
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49
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Salnikov OG, Chukanov NV, Kovtunova LM, Bukhtiyarov VI, Kovtunov KV, Shchepin RV, Koptyug IV, Chekmenev EY. Heterogeneous 1 H and 13 C Parahydrogen-Induced Polarization of Acetate and Pyruvate Esters. Chemphyschem 2021; 22:1389-1396. [PMID: 33929077 PMCID: PMC8249325 DOI: 10.1002/cphc.202100156] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/26/2021] [Revised: 04/30/2021] [Indexed: 01/01/2023]
Abstract
Magnetic resonance imaging of [1-13 C]hyperpolarized carboxylates (most notably, [1-13 C]pyruvate) allows one to visualize abnormal metabolism in tumors and other pathologies. Herein, we investigate the efficiency of 1 H and 13 C hyperpolarization of acetate and pyruvate esters with ethyl, propyl and allyl alcoholic moieties using heterogeneous hydrogenation of corresponding vinyl, allyl and propargyl precursors in isotopically unlabeled and 1-13 C-enriched forms with parahydrogen over Rh/TiO2 catalysts in methanol-d4 and in D2 O. The maximum obtained 1 H polarization was 0.6±0.2 % (for propyl acetate in CD3 OD), while the highest 13 C polarization was 0.10±0.03 % (for ethyl acetate in CD3 OD). Hyperpolarization of acetate esters surpassed that of pyruvates, while esters with a triple carbon-carbon bond in unsaturated alcoholic moiety were less efficient as parahydrogen-induced polarization precursors than esters with a double bond. Among the compounds studied, the maximum 1 H and 13 C NMR signal intensities were observed for propyl acetate. Ethyl acetate yielded slightly less intense NMR signals which were dramatically greater than those of other esters under study.
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Affiliation(s)
- Oleg G Salnikov
- International Tomography Center SB RAS, 3 A Institutskaya St., 630090, Novosibirsk, Russia
- Boreskov Institute of Catalysis SB RAS, 5 Acad. Lavrentiev Pr., 630090, Novosibirsk, Russia
- Department of Natural Sciences, Novosibirsk State University, 2 Pirogova St., 630090, Novosibirsk, Russia
| | - Nikita V Chukanov
- International Tomography Center SB RAS, 3 A Institutskaya St., 630090, Novosibirsk, Russia
- Department of Natural Sciences, Novosibirsk State University, 2 Pirogova St., 630090, Novosibirsk, Russia
| | - Larisa M Kovtunova
- International Tomography Center SB RAS, 3 A Institutskaya St., 630090, Novosibirsk, Russia
- Boreskov Institute of Catalysis SB RAS, 5 Acad. Lavrentiev Pr., 630090, Novosibirsk, Russia
- Department of Natural Sciences, Novosibirsk State University, 2 Pirogova St., 630090, Novosibirsk, Russia
| | - Valerii I Bukhtiyarov
- Boreskov Institute of Catalysis SB RAS, 5 Acad. Lavrentiev Pr., 630090, Novosibirsk, Russia
- Department of Natural Sciences, Novosibirsk State University, 2 Pirogova St., 630090, Novosibirsk, Russia
| | - Kirill V Kovtunov
- International Tomography Center SB RAS, 3 A Institutskaya St., 630090, Novosibirsk, Russia
- Department of Natural Sciences, Novosibirsk State University, 2 Pirogova St., 630090, Novosibirsk, Russia
| | - Roman V Shchepin
- Department of Chemistry, Biology, and Health Sciences, South Dakota School of Mines & Technology, 57701, Rapid City, South Dakota, United States
| | - Igor V Koptyug
- International Tomography Center SB RAS, 3 A Institutskaya St., 630090, Novosibirsk, Russia
| | - Eduard Y Chekmenev
- Department of Chemistry, Integrative Biosciences (Ibio), Karmanos Cancer Institute (KCI), Wayne State University, 48202, Detroit, Michigan, United States
- Russian Academy of Sciences, 14 Leninskiy Prospekt, 119991, Moscow, Russia
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50
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Kress T, Che K, Epasto L, Kozak F, Negroni M, Olsen G, Selimovic A, Kurzbach D. A novel sample handling system for dissolution dynamic nuclear polarization experiments. MAGNETIC RESONANCE (GOTTINGEN, GERMANY) 2021; 2:387-394. [PMID: 37904780 PMCID: PMC10539747 DOI: 10.5194/mr-2-387-2021] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 01/29/2021] [Accepted: 05/19/2021] [Indexed: 11/01/2023]
Abstract
We present a system for facilitated sample vitrification, melting, and transfer in dissolution dynamic nuclear polarization (DDNP) experiments. In DDNP, a sample is typically hyperpolarized at cryogenic temperatures before dissolution with hot solvent and transfer to a nuclear magnetic resonance (NMR) spectrometer for detection in the liquid state. The resulting signal enhancements can exceed 4 orders of magnitude. However, the sudden temperature jump from cryogenic temperatures close to 1 K to ambient conditions imposes a particular challenge. It is necessary to rapidly melt the sample to avoid a prohibitively fast decay of hyperpolarization. Here, we demonstrate a sample dissolution method that facilitates the temperature jump by eliminating the need to open the cryostat used to cool the sample. This is achieved by inserting the sample through an airlock in combination with a dedicated dissolution system that is inserted through the same airlock shortly before the melting event. The advantages are threefold: (1) the cryostat can be operated continuously at low temperatures. (2) The melting process is rapid as no pressurization steps of the cryostat are required. (3) Blockages of the dissolution system due to freezing of solvents during melting and transfer are minimized.
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Affiliation(s)
- Thomas Kress
- Yusuf Hamied Department of Chemistry, University of Cambridge, Lensfield Road,
Cambridge CB2 1EW, UK
| | - Kateryna Che
- Faculty of Chemistry, Institute of Biological
Chemistry, University of Vienna, Währinger Str. 38, Vienna, Austria
| | - Ludovica M. Epasto
- Faculty of Chemistry, Institute of Biological
Chemistry, University of Vienna, Währinger Str. 38, Vienna, Austria
| | - Fanny Kozak
- Faculty of Chemistry, Institute of Biological
Chemistry, University of Vienna, Währinger Str. 38, Vienna, Austria
| | - Mattia Negroni
- Faculty of Chemistry, Institute of Biological
Chemistry, University of Vienna, Währinger Str. 38, Vienna, Austria
| | - Gregory L. Olsen
- Faculty of Chemistry, Institute of Biological
Chemistry, University of Vienna, Währinger Str. 38, Vienna, Austria
| | - Albina Selimovic
- Faculty of Chemistry, Institute of Biological
Chemistry, University of Vienna, Währinger Str. 38, Vienna, Austria
| | - Dennis Kurzbach
- Faculty of Chemistry, Institute of Biological
Chemistry, University of Vienna, Währinger Str. 38, Vienna, Austria
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