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Nagy CA, Hann F, Brezóczki B, Farkas K, Vékony T, Pesthy O, Németh D. Intact ultrafast memory consolidation in adults with autism and neurotypicals with autism traits. Brain Res 2024; 1847:149299. [PMID: 39486781 DOI: 10.1016/j.brainres.2024.149299] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/02/2024] [Revised: 10/22/2024] [Accepted: 10/25/2024] [Indexed: 11/04/2024]
Abstract
The processes of learning and memory consolidation are closely interlinked. Therefore, to uncover statistical learning in autism spectrum disorder (ASD), an in-depth examination of memory consolidation is essential. Studies of the last five years have revealed that learning can take place not only during practice but also during micro rest (<1 min) between practice blocks, termed micro offline gains. The concept of micro offline gains refers to performance improvements during short rest periods interspersed with practice, rather than during practice itself. This phenomenon is crucial for the acquisition and consolidation of motor skills and has been observed across various learning contexts. Numerous studies on learning in autism have identified intact learning but there has been no investigation into this fundamental aspect of memory consolidation in autistic individuals to date. We conducted two studies with two different samples: 1) neurotypical adults with distinct levels of autistic traits (N = 166) and 2) ASD-diagnosed adults (NASD = 22, NNTP = 20). Participants performed a well-established probabilistic learning task, allowing us to measure two learning processes separately in the same experimental design: statistical learning (i.e., learning probability-based regularities) and visuomotor performance (i.e., speed-up regardless of probabilities). Here we show considerable individual differences in offline (between blocks) changes during statistical learning and between-blocks improvement during visuomotor performance. However, cumulative evidence from individual studies suggests that the degree of autistic traits and ASD status are not associated with micro offline gains, indicating that, like statistical learning, rapid memory consolidation is intact.
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Affiliation(s)
- Cintia Anna Nagy
- Institute of Psychology, ELTE Eötvös Loránd University, Budapest, Hungary
| | - Flóra Hann
- Institute of Psychology, ELTE Eötvös Loránd University, Budapest, Hungary; Doctoral School of Psychology, ELTE Eötvös Loránd University, Budapest, Hungary; Institute of Experimental Medicine, HUN-REN Research Centre for Natural Sciences, Budapest, Hungary
| | - Bianka Brezóczki
- Institute of Psychology, ELTE Eötvös Loránd University, Budapest, Hungary; Doctoral School of Psychology, ELTE Eötvös Loránd University, Budapest, Hungary; Institute of Cognitive Neuroscience and Psychology, HUN-REN Research Centre for Natural Sciences, Budapest, Hungary
| | - Kinga Farkas
- Department of Psychiatry and Psychotherapy, Semmelweis University, Budapest, Hungary
| | - Teodóra Vékony
- Centre de Recherche en Neurosciences de Lyon CRNL U1028 UMR5292, INSERM, CNRS, Université Claude Bernard Lyon 1, Bron, France; Department of Education and Psychology, Faculty of Social Sciences, University of Atlántico Medio, Las Palmas de Gran Canaria, Spain
| | - Orsolya Pesthy
- Institute of Psychology, ELTE Eötvös Loránd University, Budapest, Hungary; Institute of Cognitive Neuroscience and Psychology, HUN-REN Research Centre for Natural Sciences, Budapest, Hungary
| | - Dezső Németh
- Centre de Recherche en Neurosciences de Lyon CRNL U1028 UMR5292, INSERM, CNRS, Université Claude Bernard Lyon 1, Bron, France; Department of Education and Psychology, Faculty of Social Sciences, University of Atlántico Medio, Las Palmas de Gran Canaria, Spain; BML-NAP Research Group, Institute of Psychology, Eötvös Loránd University & Institute of Cognitive Neuroscience and Psychology, HUN-REN Research Centre for Natural Sciences, Budapest, Hungary.
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2
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Swanson R, Chinigò E, Levenstein D, Vöröslakos M, Mousavi N, Wang XJ, Basu J, Buzsáki G. Topography of putative bidirectional interaction between hippocampal sharp wave ripples and neocortical slow oscillations. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2024.10.23.619879. [PMID: 39484611 PMCID: PMC11526890 DOI: 10.1101/2024.10.23.619879] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Subscribe] [Scholar Register] [Indexed: 11/03/2024]
Abstract
Systems consolidation relies on coordination between hippocampal sharp-wave ripples (SWRs) and neocortical UP/DOWN states during sleep. However, whether this coupling exists across neocortex and the mechanisms enabling it remain unknown. By combining electrophysiology in mouse hippocampus (HPC) and retrosplenial cortex (RSC) with widefield imaging of dorsal neocortex, we found spatially and temporally precise bidirectional hippocampo-neocortical interaction. HPC multi-unit activity and SWR probability was correlated with UP/DOWN states in mouse default mode network, with highest modulation by RSC in deep sleep. Further, some SWRs were preceded by the high rebound excitation accompanying DMN DOWN→UP transitions, while large-amplitude SWRs were often followed by DOWN states originating in RSC. We explain these electrophysiological results with a model in which HPC and RSC are weakly coupled excitable systems capable of bi-directional perturbation and suggest RSC may act as a gateway through which SWRs can perturb downstream cortical regions via cortico-cortical propagation of DOWN states.
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Affiliation(s)
- Rachel Swanson
- Neuroscience Institute, Langone Medical Center, New York University, New York, NY, USA
| | - Elisa Chinigò
- Center for Neural Science, New York University, New York, NY, USA
| | - Daniel Levenstein
- Department of Neurology and Neurosurgery, McGill University, Montreal, QC, Canada
- Mila – The Quebec AI Institute, Montreal, QC, Canada
| | - Mihály Vöröslakos
- Neuroscience Institute, Langone Medical Center, New York University, New York, NY, USA
| | - Navid Mousavi
- Neuroscience Institute, Langone Medical Center, New York University, New York, NY, USA
| | - Xiao-Jing Wang
- Center for Neural Science, New York University, New York, NY, USA
| | - Jayeeta Basu
- Neuroscience Institute, Langone Medical Center, New York University, New York, NY, USA
- Department of Physiology and Neuroscience, Langone Medical Center, New York University, New York, NY, USA
- Department of Psychiatry, Langone Medical Center, New York University, New York, NY, USA
| | - György Buzsáki
- Neuroscience Institute, Langone Medical Center, New York University, New York, NY, USA
- Department of Physiology and Neuroscience, Langone Medical Center, New York University, New York, NY, USA
- Department of Neurology, Langone Medical Center, New York University, New York, NY, USA
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3
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Zavecz Z, Janacsek K, Simor P, Cohen MX, Nemeth D. Similarity of brain activity patterns during learning and subsequent resting state predicts memory consolidation. Cortex 2024; 179:168-190. [PMID: 39197408 DOI: 10.1016/j.cortex.2024.07.008] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/24/2023] [Revised: 05/28/2024] [Accepted: 07/29/2024] [Indexed: 09/01/2024]
Abstract
Spontaneous reactivation of brain activity from learning to a subsequent off-line period has been implicated as a neural mechanism underlying memory consolidation. However, similarities in brain activity may also emerge as a result of individual, trait-like characteristics. Here, we introduced a novel approach for analyzing continuous electroencephalography (EEG) data to investigate learning-induced changes as well as trait-like characteristics in brain activity underlying memory consolidation. Thirty-one healthy young adults performed a learning task, and their performance was retested after a short (∼1 h) delay. Consolidation of two distinct types of information (serial-order and probability) embedded in the task were tested to reveal similarities in functional networks that uniquely predict the changes in the respective memory performance. EEG was recorded during learning and pre- and post-learning rest periods. To investigate brain activity associated with consolidation, we quantified similarities in EEG functional connectivity between learning and pre-learning rest (baseline similarity) and learning and post-learning rest (post-learning similarity). While comparable patterns of these two could indicate trait-like similarities, changes from baseline to post-learning similarity could indicate learning-induced changes, possibly spontaneous reactivation. Higher learning-induced changes in alpha frequency connectivity (8.5-9.5 Hz) were associated with better consolidation of serial-order information, particularly for long-range connections across central and parietal sites. The consolidation of probability information was associated with learning-induced changes in delta frequency connectivity (2.5-3 Hz) specifically for more local, short-range connections. Furthermore, there was a substantial overlap between the baseline and post-learning similarities and their associations with consolidation performance, suggesting robust (trait-like) differences in functional connectivity networks underlying memory processes.
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Affiliation(s)
- Zsófia Zavecz
- Institute of Psychology, ELTE Eötvös Loránd University, Budapest, Hungary; Department of Psychology, University of Cambridge, Cambridge, United Kingdom.
| | - Karolina Janacsek
- Institute of Psychology, ELTE Eötvös Loránd University, Budapest, Hungary; Centre of Thinking and Learning, Institute for Lifecourse Development, School of Human Sciences, University of Greenwich, London, United Kingdom.
| | - Peter Simor
- Institute of Psychology, ELTE Eötvös Loránd University, Budapest, Hungary; Institute of Behavioural Sciences, Semmelweis University, Budapest, Hungary
| | - Michael X Cohen
- Donders Centre for Medical Neuroscience, Radboud University Medical Center, Nijmegen, the Netherlands
| | - Dezso Nemeth
- INSERM, Université Claude Bernard Lyon 1, CNRS, Centre de Recherche en Neurosciences de Lyon CRNL U1028 UMR5292, Bron, France; NAP Research Group, Institute of Psychology, Eötvös Loránd University & Institute of Cognitive Neuroscience and Psychology, HUN-REN Research Centre for Natural Sciences, Budapest, Hungary; Department of Education and Psychology, University of Atlántico Medio, Las Palmas de Gran Canaria, Spain
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Yu W, Zadbood A, Chanales AJH, Davachi L. Repetition dynamically and rapidly increases cortical, but not hippocampal, offline reactivation. Proc Natl Acad Sci U S A 2024; 121:e2405929121. [PMID: 39316058 PMCID: PMC11459139 DOI: 10.1073/pnas.2405929121] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/27/2024] [Accepted: 08/19/2024] [Indexed: 09/25/2024] Open
Abstract
No sooner is an experience over than its neural representation begins to be transformed through memory reactivation during offline periods. The lion's share of prior research has focused on understanding offline reactivation within the hippocampus. However, it is hypothesized that consolidation processes involve offline reactivation in cortical regions as well as coordinated reactivation in the hippocampus and cortex. Using fMRI, we presented novel and repeated paired associates to participants during encoding and measured offline memory reactivation for those events during an immediate post-encoding rest period. post-encoding reactivation frequency of repeated and once-presented events did not differ in the hippocampus. However, offline reactivation in widespread cortical regions and hippocampal-cortical coordinated reactivation were significantly enhanced for repeated events. These results provide evidence that repetition might facilitate the distribution of memory representations across cortical networks, a hallmark of systems-level consolidation. Interestingly, we found that offline reactivation frequency in both hippocampus and cortex explained variance in behavioral success on an immediate associative recognition test for the once-presented information, potentially indicating a role of offline reactivation in maintaining these novel, weaker, memories. Together, our findings highlight that endogenous offline reactivation can be robustly and significantly modulated by study repetition.
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Affiliation(s)
- Wangjing Yu
- Department of Psychology, Columbia University, New York, NY10027
| | - Asieh Zadbood
- Department of Psychology, Columbia University, New York, NY10027
| | - Avi J. H. Chanales
- Hinge, Inc., New York, NY10014
- Department of Psychology, New York University, New York, NY10027
| | - Lila Davachi
- Department of Psychology, Columbia University, New York, NY10027
- Department of Clinical Research, Nathan Kline Institute for Psychiatric Research, Orangeburg, NY10962
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Cerna J, Gupta P, He M, Ziegelman L, Hu Y, Hernandez ME. Tai Chi Practice Buffers Aging Effects in Functional Brain Connectivity. Brain Sci 2024; 14:901. [PMID: 39335397 PMCID: PMC11430092 DOI: 10.3390/brainsci14090901] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/30/2024] [Revised: 08/21/2024] [Accepted: 09/03/2024] [Indexed: 09/30/2024] Open
Abstract
Tai Chi (TC) practice has been shown to improve both cognitive and physical function in older adults. However, the neural mechanisms underlying the benefits of TC remain unclear. Our primary aims are to explore whether distinct age-related and TC-practice-related relationships can be identified with respect to either temporal or spatial (within/between-network connectivity) differences. This cross-sectional study examined recurrent neural network dynamics, employing an adaptive, data-driven thresholding approach to source-localized resting-state EEG data in order to identify meaningful connections across time-varying graphs, using both temporal and spatial features derived from a hidden Markov model (HMM). Mann-Whitney U tests assessed between-group differences in temporal and spatial features by age and TC practice using either healthy younger adult controls (YACs, n = 15), healthy older adult controls (OACs, n = 15), or Tai Chi older adult practitioners (TCOAs, n = 15). Our results showed that aging is associated with decreased within-network and between-network functional connectivity (FC) across most brain networks. Conversely, TC practice appears to mitigate these age-related declines, showing increased FC within and between networks in older adults who practice TC compared to non-practicing older adults. These findings suggest that TC practice may abate age-related declines in neural network efficiency and stability, highlighting its potential as a non-pharmacological intervention for promoting healthy brain aging. This study furthers the triple-network model, showing that a balancing and reorientation of attention might be engaged not only through higher-order and top-down mechanisms (i.e., FPN/DAN) but also via the coupling of bottom-up, sensory-motor (i.e., SMN/VIN) networks.
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Affiliation(s)
- Jonathan Cerna
- Neuroscience Program, University of Illinois Urbana-Champaign, Urbana, IL 61801, USA; (J.C.); (M.H.); (L.Z.)
| | - Prakhar Gupta
- Department of Electrical and Computer Engineering, University of Illinois Urbana-Champaign, Urbana, IL 61801, USA;
| | - Maxine He
- Neuroscience Program, University of Illinois Urbana-Champaign, Urbana, IL 61801, USA; (J.C.); (M.H.); (L.Z.)
| | - Liran Ziegelman
- Neuroscience Program, University of Illinois Urbana-Champaign, Urbana, IL 61801, USA; (J.C.); (M.H.); (L.Z.)
| | - Yang Hu
- Department of Kinesiology, San Jose State University, San Jose, CA 95192, USA;
| | - Manuel E. Hernandez
- Neuroscience Program, University of Illinois Urbana-Champaign, Urbana, IL 61801, USA; (J.C.); (M.H.); (L.Z.)
- Department of Biomedical and Translational Sciences, Carle Illinois College of Medicine, University of Illinois Urbana-Champaign, Urbana, IL 61801, USA
- Department of Kinesiology and Community Health, University of Illinois Urbana-Champaign, Urbana, IL 61801, USA
- Department of Bioengineering, University of Illinois Urbana-Champaign, Urbana, IL 61801, USA
- Beckman Institute for Advanced Science and Technology, University of Illinois Urbana-Champaign, Urbana, IL 61801, USA
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Ohki T, Chao ZC, Takei Y, Kato Y, Sunaga M, Suto T, Tagawa M, Fukuda M. Multivariate sharp-wave ripples in schizophrenia during awake state. Psychiatry Clin Neurosci 2024; 78:507-516. [PMID: 38923051 PMCID: PMC11488617 DOI: 10.1111/pcn.13702] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 09/27/2023] [Revised: 04/03/2024] [Accepted: 05/23/2024] [Indexed: 06/28/2024]
Abstract
AIMS Schizophrenia (SZ) is a brain disorder characterized by psychotic symptoms and cognitive dysfunction. Recently, irregularities in sharp-wave ripples (SPW-Rs) have been reported in SZ. As SPW-Rs play a critical role in memory, their irregularities can cause psychotic symptoms and cognitive dysfunction in patients with SZ. In this study, we investigated the SPW-Rs in human SZ. METHODS We measured whole-brain activity using magnetoencephalography (MEG) in patients with SZ (n = 20) and sex- and age-matched healthy participants (n = 20) during open-eye rest. We identified SPW-Rs and analyzed their occurrence and time-frequency traits. Furthermore, we developed a novel multivariate analysis method, termed "ripple-gedMEG" to extract the global features of SPW-Rs. We also examined the association between SPW-Rs and brain state transitions. The outcomes of these analyses were modeled to predict the positive and negative syndrome scale (PANSS) scores of SZ. RESULTS We found that SPW-Rs in the SZ (1) occurred more frequently, (2) the delay of the coupling phase (3) appeared in different brain areas, (4) consisted of a less organized spatiotemporal pattern, and (5) were less involved in brain state transitions. Finally, some of the neural features associated with the SPW-Rs were found to be PANSS-positive, a pathological indicator of SZ. These results suggest that widespread but disorganized SPW-Rs underlies the symptoms of SZ. CONCLUSION We identified irregularities in SPW-Rs in SZ and confirmed that their alternations were strongly associated with SZ neuropathology. These results suggest a new direction for human SZ research.
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Affiliation(s)
- Takefumi Ohki
- International Research Center for Neurointelligence (WPI‐IRCN), The University of Tokyo Institutes for Advanced StudyThe University of TokyoTokyoJapan
- Department of Psychiatry and NeuroscienceGunma University Graduate School of MedicineMaebashiJapan
| | - Zenas C. Chao
- International Research Center for Neurointelligence (WPI‐IRCN), The University of Tokyo Institutes for Advanced StudyThe University of TokyoTokyoJapan
| | - Yuichi Takei
- Department of Psychiatry and NeuroscienceGunma University Graduate School of MedicineMaebashiJapan
| | - Yutaka Kato
- Department of Psychiatry and NeuroscienceGunma University Graduate School of MedicineMaebashiJapan
- Tsutsuji Mental HospitalTatebayashiJapan
| | - Masakazu Sunaga
- Department of Psychiatry and NeuroscienceGunma University Graduate School of MedicineMaebashiJapan
| | - Tomohiro Suto
- Gunma Prefectural Psychiatric Medical CenterIsesakiJapan
| | - Minami Tagawa
- Department of Psychiatry and NeuroscienceGunma University Graduate School of MedicineMaebashiJapan
- Gunma Prefectural Psychiatric Medical CenterIsesakiJapan
| | - Masato Fukuda
- Department of Psychiatry and NeuroscienceGunma University Graduate School of MedicineMaebashiJapan
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Huang Q, Xiao Z, Yu Q, Luo Y, Xu J, Qu Y, Dolan R, Behrens T, Liu Y. Replay-triggered brain-wide activation in humans. Nat Commun 2024; 15:7185. [PMID: 39169063 PMCID: PMC11339350 DOI: 10.1038/s41467-024-51582-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/22/2023] [Accepted: 08/08/2024] [Indexed: 08/23/2024] Open
Abstract
The consolidation of discrete experiences into a coherent narrative shapes the cognitive map, providing structured mental representations of our experiences. In this process, past memories are reactivated and replayed in sequence, fostering hippocampal-cortical dialogue. However, brain-wide engagement coinciding with sequential reactivation (or replay) of memories remains largely unexplored. In this study, employing simultaneous EEG-fMRI, we capture both the spatial and temporal dynamics of memory replay. We find that during mental simulation, past memories are replayed in fast sequences as detected via EEG. These transient replay events are associated with heightened fMRI activity in the hippocampus and medial prefrontal cortex. Replay occurrence strengthens functional connectivity between the hippocampus and the default mode network, a set of brain regions key to representing the cognitive map. On the other hand, when subjects are at rest following learning, memory reactivation of task-related items is stronger than that of pre-learning rest, and is also associated with heightened hippocampal activation and augmented hippocampal connectivity to the entorhinal cortex. Together, our findings highlight a distributed, brain-wide engagement associated with transient memory reactivation and its sequential replay.
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Affiliation(s)
- Qi Huang
- State Key Laboratory of Cognitive Neuroscience and Learning, IDG/McGovern Institute for Brain Research, Beijing Normal University, Beijing, China
- Chinese Institute for Brain Research, Beijing, China
| | - Zhibing Xiao
- State Key Laboratory of Cognitive Neuroscience and Learning, IDG/McGovern Institute for Brain Research, Beijing Normal University, Beijing, China
- Chinese Institute for Brain Research, Beijing, China
| | - Qianqian Yu
- School of Psychology, Center for Brain Disorders and Cognitive Science, Shenzhen University, Shenzhen, China
| | - Yuejia Luo
- State Key Laboratory of Cognitive Neuroscience and Learning, IDG/McGovern Institute for Brain Research, Beijing Normal University, Beijing, China
- School of Psychology, Center for Brain Disorders and Cognitive Science, Shenzhen University, Shenzhen, China
| | - Jiahua Xu
- Chinese Institute for Brain Research, Beijing, China
| | - Yukun Qu
- State Key Laboratory of Cognitive Neuroscience and Learning, IDG/McGovern Institute for Brain Research, Beijing Normal University, Beijing, China
- Chinese Institute for Brain Research, Beijing, China
| | - Raymond Dolan
- State Key Laboratory of Cognitive Neuroscience and Learning, IDG/McGovern Institute for Brain Research, Beijing Normal University, Beijing, China
- Max Planck University College London Centre for Computational Psychiatry and Ageing Research, London, UK
- Wellcome Centre for Human Neuroimaging, UCL, London, UK
| | - Timothy Behrens
- Wellcome Centre for Human Neuroimaging, UCL, London, UK
- Wellcome Centre for Integrative Neuroimaging, University of Oxford, Oxford, UK
- Sainsbury Wellcome Centre for Neural Circuits and Behaviour, UCL, London, UK
| | - Yunzhe Liu
- State Key Laboratory of Cognitive Neuroscience and Learning, IDG/McGovern Institute for Brain Research, Beijing Normal University, Beijing, China.
- Chinese Institute for Brain Research, Beijing, China.
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8
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Coleman SC, Seedat ZA, Pakenham DO, Quinn AJ, Brookes MJ, Woolrich MW, Mullinger KJ. Post-task responses following working memory and movement are driven by transient spectral bursts with similar characteristics. Hum Brain Mapp 2024; 45:e26700. [PMID: 38726799 PMCID: PMC11082833 DOI: 10.1002/hbm.26700] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/19/2023] [Revised: 03/09/2024] [Accepted: 04/14/2024] [Indexed: 05/13/2024] Open
Abstract
The post-movement beta rebound has been studied extensively using magnetoencephalography (MEG) and is reliably modulated by various task parameters as well as illness. Our recent study showed that rebounds, which we generalise as "post-task responses" (PTRs), are a ubiquitous phenomenon in the brain, occurring across the cortex in theta, alpha, and beta bands. Currently, it is unknown whether PTRs following working memory are driven by transient bursts, which are moments of short-lived high amplitude activity, similar to those that drive the post-movement beta rebound. Here, we use three-state univariate hidden Markov models (HMMs), which can identify bursts without a priori knowledge of frequency content or response timings, to compare bursts that drive PTRs in working memory and visuomotor MEG datasets. Our results show that PTRs across working memory and visuomotor tasks are driven by pan-spectral transient bursts. These bursts have very similar spectral content variation over the cortex, correlating strongly between the two tasks in the alpha (R2 = .89) and beta (R2 = .53) bands. Bursts also have similar variation in duration over the cortex (e.g., long duration bursts occur in the motor cortex for both tasks), strongly correlating over cortical regions between tasks (R2 = .56), with a mean over all regions of around 300 ms in both datasets. Finally, we demonstrate the ability of HMMs to isolate signals of interest in MEG data, such that the HMM probability timecourse correlates more strongly with reaction times than frequency filtered power envelopes from the same brain regions. Overall, we show that induced PTRs across different tasks are driven by bursts with similar characteristics, which can be identified using HMMs. Given the similarity between bursts across tasks, we suggest that PTRs across the cortex may be driven by a common underlying neural phenomenon.
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Affiliation(s)
- Sebastian C. Coleman
- Sir Peter Mansfield Imaging Centre, School of Physics and AstronomyUniversity of NottinghamNottinghamUK
| | - Zelekha A. Seedat
- Sir Peter Mansfield Imaging Centre, School of Physics and AstronomyUniversity of NottinghamNottinghamUK
- Young EpilepsyLingfieldUK
| | - Daisie O. Pakenham
- Sir Peter Mansfield Imaging Centre, School of Physics and AstronomyUniversity of NottinghamNottinghamUK
- Clinical NeurophysiologyQueen's Medical Centre, Nottingham University Hospitals NHS TrustNottinghamUK
| | - Andrew J. Quinn
- Oxford Centre for Human Brain Activity, Wellcome Centre for Integrative Neuroimaging, Department of PsychiatryUniversity of OxfordOxfordUK
- Centre for Human Brain Health, School of PsychologyUniversity of BirminghamBirminghamUK
| | - Matthew J. Brookes
- Sir Peter Mansfield Imaging Centre, School of Physics and AstronomyUniversity of NottinghamNottinghamUK
| | - Mark W. Woolrich
- Oxford Centre for Human Brain Activity, Wellcome Centre for Integrative Neuroimaging, Department of PsychiatryUniversity of OxfordOxfordUK
| | - Karen J. Mullinger
- Sir Peter Mansfield Imaging Centre, School of Physics and AstronomyUniversity of NottinghamNottinghamUK
- Centre for Human Brain Health, School of PsychologyUniversity of BirminghamBirminghamUK
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9
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Staresina BP. Coupled sleep rhythms for memory consolidation. Trends Cogn Sci 2024; 28:339-351. [PMID: 38443198 DOI: 10.1016/j.tics.2024.02.002] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/11/2023] [Revised: 02/02/2024] [Accepted: 02/02/2024] [Indexed: 03/07/2024]
Abstract
How do passing moments turn into lasting memories? Sheltered from external tasks and distractions, sleep constitutes an optimal state for the brain to reprocess and consolidate previous experiences. Recent work suggests that consolidation is governed by the intricate interaction of slow oscillations (SOs), spindles, and ripples - electrophysiological sleep rhythms that orchestrate neuronal processing and communication within and across memory circuits. This review describes how sequential SO-spindle-ripple coupling provides a temporally and spatially fine-tuned mechanism to selectively strengthen target memories across hippocampal and cortical networks. Coupled sleep rhythms might be harnessed not only to enhance overnight memory retention, but also to combat memory decline associated with healthy ageing and neurodegenerative diseases.
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Affiliation(s)
- Bernhard P Staresina
- Department of Experimental Psychology, University of Oxford, Oxford, UK; Oxford Centre for Human Brain Activity, Wellcome Centre for Integrative Neuroimaging, Department of Psychiatry, University of Oxford, Oxford, UK.
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10
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Medrano J, Friston K, Zeidman P. Linking fast and slow: The case for generative models. Netw Neurosci 2024; 8:24-43. [PMID: 38562283 PMCID: PMC10861163 DOI: 10.1162/netn_a_00343] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/08/2023] [Accepted: 10/11/2023] [Indexed: 04/04/2024] Open
Abstract
A pervasive challenge in neuroscience is testing whether neuronal connectivity changes over time due to specific causes, such as stimuli, events, or clinical interventions. Recent hardware innovations and falling data storage costs enable longer, more naturalistic neuronal recordings. The implicit opportunity for understanding the self-organised brain calls for new analysis methods that link temporal scales: from the order of milliseconds over which neuronal dynamics evolve, to the order of minutes, days, or even years over which experimental observations unfold. This review article demonstrates how hierarchical generative models and Bayesian inference help to characterise neuronal activity across different time scales. Crucially, these methods go beyond describing statistical associations among observations and enable inference about underlying mechanisms. We offer an overview of fundamental concepts in state-space modeling and suggest a taxonomy for these methods. Additionally, we introduce key mathematical principles that underscore a separation of temporal scales, such as the slaving principle, and review Bayesian methods that are being used to test hypotheses about the brain with multiscale data. We hope that this review will serve as a useful primer for experimental and computational neuroscientists on the state of the art and current directions of travel in the complex systems modelling literature.
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Affiliation(s)
- Johan Medrano
- The Wellcome Centre for Human Neuroimaging, UCL Queen Square Institute of Neurology, London, UK
| | - Karl Friston
- The Wellcome Centre for Human Neuroimaging, UCL Queen Square Institute of Neurology, London, UK
| | - Peter Zeidman
- The Wellcome Centre for Human Neuroimaging, UCL Queen Square Institute of Neurology, London, UK
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11
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Roshchupkina L, Wens V, Coquelet N, Urbain C, de Tiege X, Peigneux P. Motor learning- and consolidation-related resting state fast and slow brain dynamics across wake and sleep. Sci Rep 2024; 14:7531. [PMID: 38553500 PMCID: PMC10980824 DOI: 10.1038/s41598-024-58123-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/09/2023] [Accepted: 03/26/2024] [Indexed: 04/02/2024] Open
Abstract
Motor skills dynamically evolve during practice and after training. Using magnetoencephalography, we investigated the neural dynamics underpinning motor learning and its consolidation in relation to sleep during resting-state periods after the end of learning (boost window, within 30 min) and at delayed time scales (silent 4 h and next day 24 h windows) with intermediate daytime sleep or wakefulness. Resting-state neural dynamics were investigated at fast (sub-second) and slower (supra-second) timescales using Hidden Markov modelling (HMM) and functional connectivity (FC), respectively, and their relationship to motor performance. HMM results show that fast dynamic activities in a Temporal/Sensorimotor state network predict individual motor performance, suggesting a trait-like association between rapidly recurrent neural patterns and motor behaviour. Short, post-training task re-exposure modulated neural network characteristics during the boost but not the silent window. Re-exposure-related induction effects were observed on the next day, to a lesser extent than during the boost window. Daytime naps did not modulate memory consolidation at the behavioural and neural levels. These results emphasise the critical role of the transient boost window in motor learning and memory consolidation and provide further insights into the relationship between the multiscale neural dynamics of brain networks, motor learning, and consolidation.
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Affiliation(s)
- Liliia Roshchupkina
- UR2NF - Neuropsychology and Functional Neuroimaging Research Unit Affiliated at CRCN - Centre for Research in Cognition and Neurosciences, Université Libre de Bruxelles (ULB), Brussels, Belgium.
- UNI - ULB Neuroscience Institute, Brussels, Belgium.
- LN2T - Laboratoire de Neuroanatomie et Neuroimagerie Translationnelles, ULB, Brussels, Belgium.
- Faculté des Sciences Psychologiques et de l'Éducation, Campus du Solbosch - CP 191, Avenue F.D. Roosevelt, 50, 1050, Brussels, Belgium.
| | - Vincent Wens
- UNI - ULB Neuroscience Institute, Brussels, Belgium
- LN2T - Laboratoire de Neuroanatomie et Neuroimagerie Translationnelles, ULB, Brussels, Belgium
- Department of Functional Neuroimaging, Service of Nuclear Medicine, HUB - Hôpital Universitaire de Bruxelles, Hospital Erasme, Brussels, Belgium
| | - Nicolas Coquelet
- UNI - ULB Neuroscience Institute, Brussels, Belgium
- LN2T - Laboratoire de Neuroanatomie et Neuroimagerie Translationnelles, ULB, Brussels, Belgium
- Department of Functional Neuroimaging, Service of Nuclear Medicine, HUB - Hôpital Universitaire de Bruxelles, Hospital Erasme, Brussels, Belgium
| | - Charline Urbain
- UR2NF - Neuropsychology and Functional Neuroimaging Research Unit Affiliated at CRCN - Centre for Research in Cognition and Neurosciences, Université Libre de Bruxelles (ULB), Brussels, Belgium
- UNI - ULB Neuroscience Institute, Brussels, Belgium
- LN2T - Laboratoire de Neuroanatomie et Neuroimagerie Translationnelles, ULB, Brussels, Belgium
| | - Xavier de Tiege
- UNI - ULB Neuroscience Institute, Brussels, Belgium
- LN2T - Laboratoire de Neuroanatomie et Neuroimagerie Translationnelles, ULB, Brussels, Belgium
- Department of Functional Neuroimaging, Service of Nuclear Medicine, HUB - Hôpital Universitaire de Bruxelles, Hospital Erasme, Brussels, Belgium
| | - Philippe Peigneux
- UR2NF - Neuropsychology and Functional Neuroimaging Research Unit Affiliated at CRCN - Centre for Research in Cognition and Neurosciences, Université Libre de Bruxelles (ULB), Brussels, Belgium
- UNI - ULB Neuroscience Institute, Brussels, Belgium
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12
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Pedrosa R, Nazari M, Kergoat L, Bernard C, Mohajerani M, Stella F, Battaglia F. Hippocampal ripples coincide with "up-state" and spindles in retrosplenial cortex. Cereb Cortex 2024; 34:bhae083. [PMID: 38494417 DOI: 10.1093/cercor/bhae083] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/23/2023] [Revised: 02/13/2024] [Accepted: 02/14/2024] [Indexed: 03/19/2024] Open
Abstract
During NREM sleep, hippocampal sharp-wave ripple (SWR) events are thought to stabilize memory traces for long-term storage in downstream neocortical structures. Within the neocortex, a set of distributed networks organized around retrosplenial cortex (RS-network) interact preferentially with the hippocampus purportedly to consolidate those traces. Transient bouts of slow oscillations and sleep spindles in this RS-network are often observed around SWRs, suggesting that these two activities are related and that their interplay possibly contributes to memory consolidation. To investigate how SWRs interact with the RS-network and spindles, we combined cortical wide-field voltage imaging, Electrocorticography, and hippocampal LFP recordings in anesthetized and sleeping mice. Here, we show that, during SWR, "up-states" and spindles reliably co-occur in a cortical subnetwork centered around the retrosplenial cortex. Furthermore, retrosplenial transient activations and spindles predict slow gamma oscillations in CA1 during SWRs. Together, our results suggest that retrosplenial-hippocampal interaction may be a critical pathway of information exchange between the cortex and hippocampus.
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Affiliation(s)
- Rafael Pedrosa
- Donders Institute for Brain Cognition and Behaviour, Radboud University, Nijmegen 6525AJ, The Netherlands
| | - Mojtaba Nazari
- Canadian Centre for Behavioral Neuroscience, University of Lethbridge, Lethbridge AB T1K 6 3M4, Canada
| | - Loig Kergoat
- INSERM, INS, Institut de Neurosciences des Systèmes, Aix Marseille Université, UMR_S 1106, Marseille 13005, France
- Panaxium SAS, Aix-en-Provence 13100, France
| | - Christophe Bernard
- INSERM, INS, Institut de Neurosciences des Systèmes, Aix Marseille Université, UMR_S 1106, Marseille 13005, France
| | - Majid Mohajerani
- Canadian Centre for Behavioral Neuroscience, University of Lethbridge, Lethbridge AB T1K 6 3M4, Canada
| | - Federico Stella
- Donders Institute for Brain Cognition and Behaviour, Radboud University, Nijmegen 6525AJ, The Netherlands
| | - Francesco Battaglia
- Donders Institute for Brain Cognition and Behaviour, Radboud University, Nijmegen 6525AJ, The Netherlands
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13
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Li S, Li Z, Liu Q, Ren P, Sun L, Cui Z, Liang X. Predictable navigation through spontaneous brain states with cognitive-map-like representations. Prog Neurobiol 2024; 233:102570. [PMID: 38232783 DOI: 10.1016/j.pneurobio.2024.102570] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/25/2023] [Revised: 11/19/2023] [Accepted: 01/10/2024] [Indexed: 01/19/2024]
Abstract
Just as navigating a physical environment, navigating through the landscapes of spontaneous brain states may also require an internal cognitive map. Contemporary computation theories propose modeling a cognitive map from a reinforcement learning perspective and argue that the map would be predictive in nature, representing each state as its upcoming states. Here, we used resting-state fMRI to test the hypothesis that the spaces of spontaneously reoccurring brain states are cognitive map-like, and may exhibit future-oriented predictivity. We identified two discrete brain states of the navigation-related brain networks during rest. By combining pattern similarity and dimensional reduction analysis, we embedded the occurrences of each brain state in a two-dimensional space. Successor representation modeling analysis recognized that these brain state occurrences exhibit place cell-like representations, akin to those observed in a physical space. Moreover, we observed predictive transitions of reoccurring brain states, which strongly covaried with individual cognitive and emotional assessments. Our findings offer a novel perspective on the cognitive significance of spontaneous brain activity and support the theory of cognitive map as a unifying framework for mental navigation.
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Affiliation(s)
- Siyang Li
- School of Life Science and Technology, Harbin Institute of Technology, Harbin 150001, China; Laboratory for Space Environment and Physical Sciences, Harbin Institute of Technology, Harbin 150001, China; Research Center for Human-Machine Augmented Intelligence, Research Institute of Artificial Intelligence, Zhejiang Lab, Hangzhou, Zhejiang 311100, China
| | - Zhipeng Li
- School of Life Science and Technology, Harbin Institute of Technology, Harbin 150001, China; Laboratory for Space Environment and Physical Sciences, Harbin Institute of Technology, Harbin 150001, China
| | - Qiuyi Liu
- School of Life Science and Technology, Harbin Institute of Technology, Harbin 150001, China; Laboratory for Space Environment and Physical Sciences, Harbin Institute of Technology, Harbin 150001, China
| | - Peng Ren
- School of Life Science and Technology, Harbin Institute of Technology, Harbin 150001, China
| | - Lili Sun
- School of Life Science and Technology, Harbin Institute of Technology, Harbin 150001, China; Laboratory for Space Environment and Physical Sciences, Harbin Institute of Technology, Harbin 150001, China
| | - Zaixu Cui
- Chinese Institute for Brain Research, Beijing 102206, China
| | - Xia Liang
- Laboratory for Space Environment and Physical Sciences, Harbin Institute of Technology, Harbin 150001, China; Frontiers Science Center for Matter Behave in Space Environment, Harbin Institute of Technology, Harbin 150001, China.
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14
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Gohil C, Huang R, Roberts E, van Es MWJ, Quinn AJ, Vidaurre D, Woolrich MW. osl-dynamics, a toolbox for modeling fast dynamic brain activity. eLife 2024; 12:RP91949. [PMID: 38285016 PMCID: PMC10945565 DOI: 10.7554/elife.91949] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/30/2024] Open
Abstract
Neural activity contains rich spatiotemporal structure that corresponds to cognition. This includes oscillatory bursting and dynamic activity that span across networks of brain regions, all of which can occur on timescales of tens of milliseconds. While these processes can be accessed through brain recordings and imaging, modeling them presents methodological challenges due to their fast and transient nature. Furthermore, the exact timing and duration of interesting cognitive events are often a priori unknown. Here, we present the OHBA Software Library Dynamics Toolbox (osl-dynamics), a Python-based package that can identify and describe recurrent dynamics in functional neuroimaging data on timescales as fast as tens of milliseconds. At its core are machine learning generative models that are able to adapt to the data and learn the timing, as well as the spatial and spectral characteristics, of brain activity with few assumptions. osl-dynamics incorporates state-of-the-art approaches that can be, and have been, used to elucidate brain dynamics in a wide range of data types, including magneto/electroencephalography, functional magnetic resonance imaging, invasive local field potential recordings, and electrocorticography. It also provides novel summary measures of brain dynamics that can be used to inform our understanding of cognition, behavior, and disease. We hope osl-dynamics will further our understanding of brain function, through its ability to enhance the modeling of fast dynamic processes.
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Affiliation(s)
- Chetan Gohil
- Oxford Centre for Human Brain Activity, Wellcome Centre for Integrative Neuroimaging, Department of Psychiatry, University of OxfordOxfordUnited Kingdom
| | - Rukuang Huang
- Oxford Centre for Human Brain Activity, Wellcome Centre for Integrative Neuroimaging, Department of Psychiatry, University of OxfordOxfordUnited Kingdom
| | - Evan Roberts
- Oxford Centre for Human Brain Activity, Wellcome Centre for Integrative Neuroimaging, Department of Psychiatry, University of OxfordOxfordUnited Kingdom
| | - Mats WJ van Es
- Oxford Centre for Human Brain Activity, Wellcome Centre for Integrative Neuroimaging, Department of Psychiatry, University of OxfordOxfordUnited Kingdom
| | - Andrew J Quinn
- Oxford Centre for Human Brain Activity, Wellcome Centre for Integrative Neuroimaging, Department of Psychiatry, University of OxfordOxfordUnited Kingdom
- Centre for Human Brain Health, School of Psychology, University of BirminghamBirminghamUnited Kingdom
| | - Diego Vidaurre
- Oxford Centre for Human Brain Activity, Wellcome Centre for Integrative Neuroimaging, Department of Psychiatry, University of OxfordOxfordUnited Kingdom
- Center for Functionally Integrative Neuroscience, Department of Clinical Medicine, Aarhus UniversityAarhusDenmark
| | - Mark W Woolrich
- Oxford Centre for Human Brain Activity, Wellcome Centre for Integrative Neuroimaging, Department of Psychiatry, University of OxfordOxfordUnited Kingdom
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15
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Tang CW, Zich C, Quinn AJ, Woolrich MW, Hsu SP, Juan CH, Lee IH, Stagg CJ. Post-stroke upper limb recovery is correlated with dynamic resting-state network connectivity. Brain Commun 2024; 6:fcae011. [PMID: 38344655 PMCID: PMC10853981 DOI: 10.1093/braincomms/fcae011] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/02/2023] [Revised: 11/25/2023] [Accepted: 01/22/2024] [Indexed: 03/02/2024] Open
Abstract
Motor recovery is still limited for people with stroke especially those with greater functional impairments. In order to improve outcome, we need to understand more about the mechanisms underpinning recovery. Task-unbiased, blood flow-independent post-stroke neural activity can be acquired from resting brain electrophysiological recordings and offers substantial promise to investigate physiological mechanisms, but behaviourally relevant features of resting-state sensorimotor network dynamics have not yet been identified. Thirty-seven people with subcortical ischaemic stroke and unilateral hand paresis of any degree were longitudinally evaluated at 3 weeks (early subacute) and 12 weeks (late subacute) after stroke. Resting-state magnetoencephalography and clinical scores of motor function were recorded and compared with matched controls. Magnetoencephalography data were decomposed using a data-driven hidden Markov model into 10 time-varying resting-state networks. People with stroke showed statistically significantly improved Action Research Arm Test and Fugl-Meyer upper extremity scores between 3 weeks and 12 weeks after stroke (both P < 0.001). Hidden Markov model analysis revealed a primarily alpha-band ipsilesional resting-state sensorimotor network which had a significantly increased life-time (the average time elapsed between entering and exiting the network) and fractional occupancy (the occupied percentage among all networks) at 3 weeks after stroke when compared with controls. The life-time of the ipsilesional resting-state sensorimotor network positively correlated with concurrent motor scores in people with stroke who had not fully recovered. Specifically, this relationship was observed only in ipsilesional rather in contralesional sensorimotor network, default mode network or visual network. The ipsilesional sensorimotor network metrics were not significantly different from controls at 12 weeks after stroke. The increased recruitment of alpha-band ipsilesional resting-state sensorimotor network at subacute stroke served as functionally correlated biomarkers exclusively in people with stroke with not fully recovered hand paresis, plausibly reflecting functional motor recovery processes.
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Affiliation(s)
- Chih-Wei Tang
- Institute of Brain Science, Brain Research Center, National Yang Ming Chiao Tung University, Taipei City 112, Taiwan
- Department of Neurology, Far Eastern Memorial Hospital, New Taipei City 220, Taiwan
| | - Catharina Zich
- Nuffield Department of Clinical Neurosciences, Wellcome Centre for Integrative Neuroimaging, FMRIB, University of Oxford, Oxford OX3 9DU, UK
- MRC Brain Network Dynamics Unit, University of Oxford, Oxford, OX1 3TH, UK
| | - Andrew J Quinn
- Nuffield Department of Clinical Neurosciences, Wellcome Centre for Integrative Neuroimaging, FMRIB, University of Oxford, Oxford OX3 9DU, UK
- Department of Psychiatry, Oxford Centre for Human Brain Activity, Wellcome Centre for Integrative Neuroimaging, University of Oxford, Oxford OX3 7JX, UK
- Centre for Human Brain Health, School of Psychology, University of Birmingham, Birmingham B15 2TT, UK
| | - Mark W Woolrich
- Nuffield Department of Clinical Neurosciences, Wellcome Centre for Integrative Neuroimaging, FMRIB, University of Oxford, Oxford OX3 9DU, UK
- Department of Psychiatry, Oxford Centre for Human Brain Activity, Wellcome Centre for Integrative Neuroimaging, University of Oxford, Oxford OX3 7JX, UK
| | - Shih-Pin Hsu
- Institute of Brain Science, Brain Research Center, National Yang Ming Chiao Tung University, Taipei City 112, Taiwan
| | - Chi-Hung Juan
- Institute of Cognitive Neuroscience, National Central University, Taoyuan City 320, Taiwan
| | - I Hui Lee
- Institute of Brain Science, Brain Research Center, National Yang Ming Chiao Tung University, Taipei City 112, Taiwan
- Division of Cerebrovascular Diseases, Neurological Institute, Taipei Veterans General Hospital, Taipei City 112, Taiwan
| | - Charlotte J Stagg
- Nuffield Department of Clinical Neurosciences, Wellcome Centre for Integrative Neuroimaging, FMRIB, University of Oxford, Oxford OX3 9DU, UK
- MRC Brain Network Dynamics Unit, University of Oxford, Oxford, OX1 3TH, UK
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16
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Ohki T, Kunii N, Chao ZC. Efficient, continual, and generalized learning in the brain - neural mechanism of Mental Schema 2.0. Rev Neurosci 2023; 34:839-868. [PMID: 36960579 DOI: 10.1515/revneuro-2022-0137] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/15/2022] [Accepted: 02/26/2023] [Indexed: 03/25/2023]
Abstract
There has been tremendous progress in artificial neural networks (ANNs) over the past decade; however, the gap between ANNs and the biological brain as a learning device remains large. With the goal of closing this gap, this paper reviews learning mechanisms in the brain by focusing on three important issues in ANN research: efficiency, continuity, and generalization. We first discuss the method by which the brain utilizes a variety of self-organizing mechanisms to maximize learning efficiency, with a focus on the role of spontaneous activity of the brain in shaping synaptic connections to facilitate spatiotemporal learning and numerical processing. Then, we examined the neuronal mechanisms that enable lifelong continual learning, with a focus on memory replay during sleep and its implementation in brain-inspired ANNs. Finally, we explored the method by which the brain generalizes learned knowledge in new situations, particularly from the mathematical generalization perspective of topology. Besides a systematic comparison in learning mechanisms between the brain and ANNs, we propose "Mental Schema 2.0," a new computational property underlying the brain's unique learning ability that can be implemented in ANNs.
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Affiliation(s)
- Takefumi Ohki
- International Research Center for Neurointelligence (WPI-IRCN), The University of Tokyo Institutes for Advanced Study, The University of Tokyo, Tokyo 113-0033, Japan
| | - Naoto Kunii
- Department of Neurosurgery, The University of Tokyo, Tokyo 113-0033, Japan
| | - Zenas C Chao
- International Research Center for Neurointelligence (WPI-IRCN), The University of Tokyo Institutes for Advanced Study, The University of Tokyo, Tokyo 113-0033, Japan
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17
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Buzi G, Fornari C, Perinelli A, Mazza V. Functional connectivity changes in mild cognitive impairment: A meta-analysis of M/EEG studies. Clin Neurophysiol 2023; 156:183-195. [PMID: 37967512 DOI: 10.1016/j.clinph.2023.10.011] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/19/2023] [Revised: 08/31/2023] [Accepted: 10/22/2023] [Indexed: 11/17/2023]
Abstract
OBJECTIVE Early synchrony alterations have been observed through electrophysiological techniques in Mild Cognitive Impairment (MCI), which is considered the intermediate phase between healthy aging (HC) and Alzheimer's disease (AD). However, the documented direction (hyper/hypo-synchronization), regions and frequency bands affected are inconsistent. This meta-analysis intended to elucidate existing evidence linked to potential neurophysiological biomarkers of AD. METHODS We conducted a random-effects meta-analysis that entailed the unbiased inclusion of Non-statistically Significant Unreported Effect Sizes ("MetaNSUE") of electroencephalogram (EEG) and magnetoencephalogram (MEG) studies investigating functional connectivity changes at rest along the healthy-pathological aging continuum, searched through PubMed, Scopus, Web of Science and PsycINFO databases until June 2023. RESULTS Of the 3852 articles extracted, we analyzed 12 papers, and we found an alpha synchrony decrease in MCI compared to HC, specifically between temporal-parietal (d = -0.26) and frontal-parietal areas (d = -0.25). CONCLUSIONS Alterations of alpha synchrony are present even at MCI stage. SIGNIFICANCE Synchrony measures may be promising for the detection of the first hallmarks of connectivity alterations, even at the prodromal stages of the AD, before clinical symptoms occur.
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Affiliation(s)
- Giulia Buzi
- U1077 INSERM-EPHE-UNICAEN, Caen 14000, France
| | - Chiara Fornari
- Center for Mind/Brain Sciences (CIMeC), University of Trento, Rovereto, Italy.
| | - Alessio Perinelli
- Department of Physics, University of Trento, Trento, Italy; INFN-TIFPA, Trento, Italy
| | - Veronica Mazza
- Center for Mind/Brain Sciences (CIMeC), University of Trento, Rovereto, Italy.
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18
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Varma MM, Yu R. A spontaneous neural replay account for involuntary autobiographical memories and déjà vu experiences. Behav Brain Sci 2023; 46:e380. [PMID: 37961766 DOI: 10.1017/s0140525x23000109] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2023]
Abstract
Barzykowski and Moulin argue both involuntary autobiographical memories and déjà vu experiences rely on the same involuntary memory retrieval processes but their underlying neurological basis remains unclear. We propose spontaneous neural replay in the default mode network (DMN) and hippocampus as the basis for involuntary autobiographical memories, whereas for déjà vu experiences such transient activation is limited to the DMN.
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Affiliation(s)
- Mohith M Varma
- Department of Management, School of Business, Hong Kong Baptist University, Hong Kong, S.A.R. China
| | - Rongjun Yu
- Department of Management, School of Business, Hong Kong Baptist University, Hong Kong, S.A.R. China
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19
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Kucyi A, Kam JWY, Andrews-Hanna JR, Christoff K, Whitfield-Gabrieli S. Recent advances in the neuroscience of spontaneous and off-task thought: implications for mental health. NATURE MENTAL HEALTH 2023; 1:827-840. [PMID: 37974566 PMCID: PMC10653280 DOI: 10.1038/s44220-023-00133-w] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/27/2022] [Accepted: 08/25/2023] [Indexed: 11/19/2023]
Abstract
People spend a remarkable 30-50% of awake life thinking about something other than what they are currently doing. These experiences of being "off-task" can be described as spontaneous thought when mental dynamics are relatively flexible. Here we review recent neuroscience developments in this area and consider implications for mental wellbeing and illness. We provide updated overviews of the roles of the default mode network and large-scale network dynamics, and we discuss emerging candidate mechanisms involving hippocampal memory (sharp-wave ripples, replay) and neuromodulatory (noradrenergic and serotonergic) systems. We explore how distinct brain states can be associated with or give rise to adaptive and maladaptive forms of thought linked to distinguishable mental health outcomes. We conclude by outlining new directions in the neuroscience of spontaneous and off-task thought that may clarify mechanisms, lead to personalized biomarkers, and facilitate therapy developments toward the goals of better understanding and improving mental health.
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Affiliation(s)
- Aaron Kucyi
- Department of Psychological and Brain Sciences, Drexel University
| | - Julia W. Y. Kam
- Department of Psychology and Hotchkiss Brain Institute, University of Calgary
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20
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Azizi L, Polti I, van Wassenhove V. Spontaneous α Brain Dynamics Track the Episodic "When". J Neurosci 2023; 43:7186-7197. [PMID: 37704373 PMCID: PMC10601376 DOI: 10.1523/jneurosci.0816-23.2023] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/27/2023] [Revised: 07/14/2023] [Accepted: 08/06/2023] [Indexed: 09/15/2023] Open
Abstract
Across species, neurons track time over the course of seconds to minutes, which may feed the sense of time passing. Here, we asked whether neural signatures of time-tracking could be found in humans. Participants stayed quietly awake for a few minutes while being recorded with magnetoencephalography (MEG). They were unaware they would be asked how long the recording lasted (retrospective time) or instructed beforehand to estimate how long it will last (prospective timing). At rest, rhythmic brain activity is nonstationary and displays bursts of activity in the alpha range (α: 7-14 Hz). When participants were not instructed to attend to time, the relative duration of α bursts linearly predicted individuals' retrospective estimates of how long their quiet wakefulness lasted. The relative duration of α bursts was a better predictor than α power or burst amplitude. No other rhythmic or arrhythmic activity predicted retrospective duration. However, when participants timed prospectively, the relative duration of α bursts failed to predict their duration estimates. Consistent with this, the amount of α bursts was discriminant between prospective and retrospective timing. Last, with a control experiment, we demonstrate that the relation between α bursts and retrospective time is preserved even when participants are engaged in a visual counting task. Thus, at the time scale of minutes, we report that the relative time of spontaneous α burstiness predicts conscious retrospective time. We conclude that in the absence of overt attention to time, α bursts embody discrete states of awareness constitutive of episodic timing.SIGNIFICANCE STATEMENT The feeling that time passes is a core component of consciousness and episodic memory. A century ago, brain rhythms called "α" were hypothesized to embody an internal clock. However, rhythmic brain activity is nonstationary and displays on-and-off oscillatory bursts, which would serve irregular ticks to the hypothetical clock. Here, we discovered that in a given lapse of time, the relative bursting time of α rhythms is a good indicator of how much time an individual will report to have elapsed. Remarkably, this relation only holds true when the individual does not attend to time and vanishes when attending to it. Our observations suggest that at the scale of minutes, α brain activity tracks episodic time.
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Affiliation(s)
- Leila Azizi
- Cognitive Neuroimaging Unit, NeuroSpin, Commissariat à l'énergie atomique et aux énergies alternatives, Institut National de la Santé et de la Recherche Médicale, Université Paris-Saclay, Gif/Yvette 91191, France
| | - Ignacio Polti
- Kavli Institute for Systems Neuroscience, Norwegian University of Science and Technology, Trondheim, Norway 7030
- Department of Psychology, Max Planck Institute for Human Cognitive and Brain Sciences, Leipzig, Germany D-04103
| | - Virginie van Wassenhove
- Cognitive Neuroimaging Unit, NeuroSpin, Commissariat à l'énergie atomique et aux énergies alternatives, Institut National de la Santé et de la Recherche Médicale, Université Paris-Saclay, Gif/Yvette 91191, France
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21
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Khazaei M, Raeisi K, Vanhatalo S, Zappasodi F, Comani S, Tokariev A. Neonatal cortical activity organizes into transient network states that are affected by vigilance states and brain injury. Neuroimage 2023; 279:120342. [PMID: 37619792 DOI: 10.1016/j.neuroimage.2023.120342] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/18/2023] [Revised: 08/11/2023] [Accepted: 08/21/2023] [Indexed: 08/26/2023] Open
Abstract
Early neurodevelopment is critically dependent on the structure and dynamics of spontaneous neuronal activity; however, the natural organization of newborn cortical networks is poorly understood. Recent adult studies suggest that spontaneous cortical activity exhibits discrete network states with physiological correlates. Here, we studied newborn cortical activity during sleep using hidden Markov modeling to determine the presence of such discrete neonatal cortical states (NCS) in 107 newborn infants, with 47 of them presenting with a perinatal brain injury. Our results show that neonatal cortical activity organizes into four discrete NCSs that are present in both cardinal sleep states of a newborn infant, active and quiet sleep, respectively. These NCSs exhibit state-specific spectral and functional network characteristics. The sleep states exhibit different NCS dynamics, with quiet sleep presenting higher fronto-temporal activity and a stronger brain-wide neuronal coupling. Brain injury was associated with prolonged lifetimes of the transient NCSs, suggesting lowered dynamics, or flexibility, in the cortical networks. Taken together, the findings suggest that spontaneously occurring transient network states are already present at birth, with significant physiological and pathological correlates; this NCS analysis framework can be fully automatized, and it holds promise for offering an objective, global level measure of early brain function for benchmarking neurodevelopmental or clinical research.
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Affiliation(s)
- Mohammad Khazaei
- Department of Neurosciences, Imaging and Clinical Sciences, University "Gabriele d'Annunzio" of Chieti-Pescara, ITAB building, 3rd floor, room 314, Chieti, Via dei Vestini, Italy.
| | - Khadijeh Raeisi
- Department of Neurosciences, Imaging and Clinical Sciences, University "Gabriele d'Annunzio" of Chieti-Pescara, ITAB building, 3rd floor, room 314, Chieti, Via dei Vestini, Italy
| | - Sampsa Vanhatalo
- BABA center, Pediatric Research Center, Departments of Clinical Neurophysiology and Physiology, Children's Hospital, Helsinki University Hospital and University of Helsinki, Helsinki, Finland
| | - Filippo Zappasodi
- Department of Neurosciences, Imaging and Clinical Sciences, University "Gabriele d'Annunzio" of Chieti-Pescara, ITAB building, 3rd floor, room 314, Chieti, Via dei Vestini, Italy; Institute for Advanced Biomedical Technologies, University "Gabriele d'Annunzio" of Chieti-Pescara, Chieti, Italy
| | - Silvia Comani
- Department of Neurosciences, Imaging and Clinical Sciences, University "Gabriele d'Annunzio" of Chieti-Pescara, ITAB building, 3rd floor, room 314, Chieti, Via dei Vestini, Italy; Behavioral Imaging and Neural Dynamics Center, University "Gabriele d'Annunzio" of Chieti-Pescara, Chieti, Italy
| | - Anton Tokariev
- BABA center, Pediatric Research Center, Departments of Clinical Neurophysiology and Physiology, Children's Hospital, Helsinki University Hospital and University of Helsinki, Helsinki, Finland
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22
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Wamsley EJ, Arora M, Gibson H, Powell P, Collins M. Memory Consolidation during Ultra-short Offline States. J Cogn Neurosci 2023; 35:1617-1634. [PMID: 37584585 DOI: 10.1162/jocn_a_02035] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 08/17/2023]
Abstract
Traditionally, neuroscience and psychology have studied the human brain during periods of "online" attention to the environment, while participants actively engage in processing sensory stimuli. However, emerging evidence shows that the waking brain also intermittently enters an "offline" state, during which sensory processing is inhibited and our attention shifts inward. In fact, humans may spend up to half of their waking hours offline [Wamsley, E. J., & Summer, T. Spontaneous entry into an "offline" state during wakefulness: A mechanism of memory consolidation? Journal of Cognitive Neuroscience, 32, 1714-1734, 2020; Killingsworth, M. A., & Gilbert, D. T. A wandering mind is an unhappy mind. Science, 330, 932, 2010]. The function of alternating between online and offline forms of wakefulness remains unknown. We hypothesized that rapidly switching between online and offline states enables the brain to alternate between the competing demands of encoding new information and consolidating already-encoded information. A total of 46 participants (34 female) trained on a memory task just before a 30-min retention interval, during which they completed a simple attention task while undergoing simultaneous high-density EEG and pupillometry recording. We used a data-driven method to parse this retention interval into a sequence of discrete online and offline states, with a 5-sec temporal resolution. We found evidence for three distinct states, one of which was an offline state with features well-suited to support memory consolidation, including increased EEG slow oscillation power, reduced attention to the external environment, and increased pupil diameter (a proxy for increased norepinephrine). Participants who spent more time in this offline state following encoding showed improved memory at delayed test. These observations are consistent with the hypothesis that even brief, seconds-long entry into an offline state may support the early stages of memory consolidation.
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Li Z, Athwal D, Lee HL, Sah P, Opazo P, Chuang KH. Locating causal hubs of memory consolidation in spontaneous brain network in male mice. Nat Commun 2023; 14:5399. [PMID: 37669938 PMCID: PMC10480429 DOI: 10.1038/s41467-023-41024-z] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/22/2022] [Accepted: 08/17/2023] [Indexed: 09/07/2023] Open
Abstract
Memory consolidation after learning involves spontaneous, brain-wide network reorganization during rest and sleep, but how this is achieved is still poorly understood. Current theory suggests that the hippocampus is pivotal for this reshaping of connectivity. Using fMRI in male mice, we identify that a different set of spontaneous networks and their hubs are instrumental in consolidating memory during post-learning rest. We found that two types of spatial memory training invoke distinct functional connections, but that a network of the sensory cortex and subcortical areas is common for both tasks. Furthermore, learning increased brain-wide network integration, with the prefrontal, striatal and thalamic areas being influential for this network-level reconfiguration. Chemogenetic suppression of each hub identified after learning resulted in retrograde amnesia, confirming the behavioral significance. These results demonstrate the causal and functional roles of resting-state network hubs in memory consolidation and suggest that a distributed network beyond the hippocampus subserves this process.
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Affiliation(s)
- Zengmin Li
- Queensland Brain Institute, The University of Queensland, Brisbane, QLD, Australia
| | - Dilsher Athwal
- Queensland Brain Institute, The University of Queensland, Brisbane, QLD, Australia
| | - Hsu-Lei Lee
- Queensland Brain Institute, The University of Queensland, Brisbane, QLD, Australia
| | - Pankaj Sah
- Queensland Brain Institute, The University of Queensland, Brisbane, QLD, Australia
- Joint Center for Neuroscience and Neural Engineering, and Department of Biology, Southern University of Science and Technology, Shenzhen, Guangdong, PR China
| | - Patricio Opazo
- Queensland Brain Institute, The University of Queensland, Brisbane, QLD, Australia
- Clem Jones Centre for Ageing Dementia Research, The University of Queensland, Brisbane, QLD, Australia
- UK Dementia Research Institute, Centre for Discovery Brain Sciences, The University of Edinburgh, Edinburgh, UK
| | - Kai-Hsiang Chuang
- Queensland Brain Institute, The University of Queensland, Brisbane, QLD, Australia.
- Centre of Advanced Imaging, The University of Queensland, Brisbane, QLD, Australia.
- Australian Research Council Training Centre for Innovation in Biomedical Imaging Technology, Brisbane, QLD, Australia.
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24
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Hong Y, Moore IL, Smith DE, Long NM. Spatiotemporal Dynamics of Memory Encoding and Memory Retrieval States. J Cogn Neurosci 2023; 35:1463-1477. [PMID: 37348133 PMCID: PMC10513765 DOI: 10.1162/jocn_a_02022] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/24/2023]
Abstract
Memory encoding and memory retrieval are neurally distinct brain states that can be differentiated on the basis of cortical network activity. However, it is unclear whether sustained engagement of one network or fluctuations between multiple networks give rise to these memory states. The spatiotemporal dynamics of memory states may have important implications for memory behavior and cognition; however, measuring temporally resolved signals of cortical networks poses a challenge. Here, we recorded scalp electroencephalography from participants performing a mnemonic state task in which they were biased toward memory encoding or retrieval. We performed a microstate analysis to measure the temporal dynamics of cortical networks throughout this mnemonic state task. We find that Microstate E, a putative analog of the default mode network, shows temporally sustained dissociations between memory encoding and retrieval, with greater engagement during retrieve compared with encode trials. We further show that decreased engagement of Microstate E is a general property of encoding, rather than a reflection of retrieval suppression. Thus, memory success, as well as cognition more broadly, may be influenced by the ability to engage or disengage Microstate E in a goal-dependent manner.
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Affiliation(s)
- Yuju Hong
- University of Virginia, Charlottesville
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25
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Brown JA, Clancy KJ, Chen C, Zeng Y, Qin S, Ding M, Li W. Transcranial stimulation of alpha oscillations modulates brain state dynamics in sustained attention. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2023:2023.05.27.542583. [PMID: 37398325 PMCID: PMC10312462 DOI: 10.1101/2023.05.27.542583] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 07/04/2023]
Abstract
The brain operates an advanced complex system to support mental activities. Cognition is thought to emerge from dynamic states of the complex brain system, which are organized spatially through large-scale neural networks and temporally via neural synchrony. However, specific mechanisms underlying these processes remain obscure. Applying high-definition alpha-frequency transcranial alternating-current stimulation (HD α-tACS) in a continuous performance task (CPT) during functional resonance imaging (fMRI), we causally elucidate these major organizational architectures in a key cognitive operation-sustained attention. We demonstrated that α-tACS enhanced both electroencephalogram (EEG) alpha power and sustained attention, in a correlated fashion. Akin to temporal fluctuations inherent in sustained attention, our hidden Markov modeling (HMM) of fMRI timeseries uncovered several recurrent, dynamic brain states, which were organized through a few major neural networks and regulated by the alpha oscillation. Specifically, during sustain attention, α-tACS regulated the temporal dynamics of the brain states by suppressing a Task-Negative state (characterized by activation of the default mode network/DMN) and Distraction state (with activation of the ventral attention and visual networks). These findings thus linked dynamic states of major neural networks and alpha oscillations, providing important insights into systems-level mechanisms of attention. They also highlight the efficacy of non-invasive oscillatory neuromodulation in probing the functioning of the complex brain system and encourage future clinical applications to improve neural systems health and cognitive performance.
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Affiliation(s)
- Joshua A. Brown
- Department of Psychology, Florida State University, Tallahassee, FL
| | - Kevin J. Clancy
- Department of Psychology, Florida State University, Tallahassee, FL
| | - Chaowen Chen
- Department of Psychology, Florida State University, Tallahassee, FL
- Tallahassee Memorial Healthcare, Tallahassee, FL
| | - Yimeng Zeng
- State Key Laboratory of Cognitive Neuroscience and Learning, Beijing Normal University, Beijing, China
| | - Shaozheng Qin
- State Key Laboratory of Cognitive Neuroscience and Learning, Beijing Normal University, Beijing, China
| | - Mingzhou Ding
- J Crayton Pruitt Family Department of Biomedical Engineering, University of Florida, Gainesville, FL
| | - Wen Li
- Department of Psychology, Florida State University, Tallahassee, FL
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26
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Honey CJ, Mahabal A, Bellana B. Psychological Momentum. CURRENT DIRECTIONS IN PSYCHOLOGICAL SCIENCE 2023; 32:284-292. [PMID: 37786409 PMCID: PMC10545321 DOI: 10.1177/09637214221143053] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/04/2023]
Abstract
Our mental experience is largely continuous on the scale of seconds and minutes. However, this continuity does not always arise from a volitional carrying forward of ideas. Instead, recent actions, thoughts, dispositions, and emotions can persist in mind, continually shaping our later experience. Aspects of this fundamental property of human cognition - psychological momentum - have been studied under the rubrics of memory, task set, mood, mind-wandering, and mindset. Reviewing these largely independent threads of research, we argue that psychological momentum is best understood from an integrated perspective, as an adaptation that helps us meet the current demands of our environment and to form lasting memories.
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27
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Masaracchia L, Fredes F, Woolrich MW, Vidaurre D. Dissecting unsupervised learning through hidden Markov modeling in electrophysiological data. J Neurophysiol 2023; 130:364-379. [PMID: 37403598 PMCID: PMC10625837 DOI: 10.1152/jn.00054.2023] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/01/2023] [Revised: 06/28/2023] [Accepted: 06/29/2023] [Indexed: 07/06/2023] Open
Abstract
Unsupervised, data-driven methods are commonly used in neuroscience to automatically decompose data into interpretable patterns. These patterns differ from one another depending on the assumptions of the models. How these assumptions affect specific data decompositions in practice, however, is often unclear, which hinders model applicability and interpretability. For instance, the hidden Markov model (HMM) automatically detects characteristic, recurring activity patterns (so-called states) from time series data. States are defined by a certain probability distribution, whose state-specific parameters are estimated from the data. But what specific features, from all of those that the data contain, do the states capture? That depends on the choice of probability distribution and on other model hyperparameters. Using both synthetic and real data, we aim to better characterize the behavior of two HMM types that can be applied to electrophysiological data. Specifically, we study which differences in data features (such as frequency, amplitude, or signal-to-noise ratio) are more salient to the models and therefore more likely to drive the state decomposition. Overall, we aim at providing guidance for the appropriate use of this type of analysis on one- or two-channel neural electrophysiological data and an informed interpretation of its results given the characteristics of the data and the purpose of the analysis.NEW & NOTEWORTHY Compared with classical supervised methods, unsupervised methods of analysis have the advantage to be freer of subjective biases. However, it is not always clear what aspects of the data these methods are most sensitive to, which complicates interpretation. Focusing on the hidden Markov model, commonly used to describe electrophysiological data, we explore in detail the nature of its estimates through simulations and real data examples, providing important insights about what to expect from these models.
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Affiliation(s)
- Laura Masaracchia
- Center of Functionally Integrative Neuroscience, Department of Clinical Medicine, Aarhus University, Aarhus, Denmark
| | - Felipe Fredes
- Center for Proteins in Memory, Department of Biomedicine, Aarhus University, Aarhus, Denmark
| | - Mark W Woolrich
- Psychiatry Department, Oxford Centre for Human Brain Activity, Oxford University, Oxford, United Kingdom
| | - Diego Vidaurre
- Center of Functionally Integrative Neuroscience, Department of Clinical Medicine, Aarhus University, Aarhus, Denmark
- Psychiatry Department, Oxford Centre for Human Brain Activity, Oxford University, Oxford, United Kingdom
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28
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Páscoa Dos Santos F, Vohryzek J, Verschure PFMJ. Multiscale effects of excitatory-inhibitory homeostasis in lesioned cortical networks: A computational study. PLoS Comput Biol 2023; 19:e1011279. [PMID: 37418506 DOI: 10.1371/journal.pcbi.1011279] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/29/2022] [Accepted: 06/18/2023] [Indexed: 07/09/2023] Open
Abstract
Stroke-related disruptions in functional connectivity (FC) often spread beyond lesioned areas and, given the localized nature of lesions, it is unclear how the recovery of FC is orchestrated on a global scale. Since recovery is accompanied by long-term changes in excitability, we propose excitatory-inhibitory (E-I) homeostasis as a driving mechanism. We present a large-scale model of the neocortex, with synaptic scaling of local inhibition, showing how E-I homeostasis can drive the post-lesion restoration of FC and linking it to changes in excitability. We show that functional networks could reorganize to recover disrupted modularity and small-worldness, but not network dynamics, suggesting the need to consider forms of plasticity beyond synaptic scaling of inhibition. On average, we observed widespread increases in excitability, with the emergence of complex lesion-dependent patterns related to biomarkers of relevant side effects of stroke, such as epilepsy, depression and chronic pain. In summary, our results show that the effects of E-I homeostasis extend beyond local E-I balance, driving the restoration of global properties of FC, and relating to post-stroke symptomatology. Therefore, we suggest the framework of E-I homeostasis as a relevant theoretical foundation for the study of stroke recovery and for understanding the emergence of meaningful features of FC from local dynamics.
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Affiliation(s)
- Francisco Páscoa Dos Santos
- Eodyne Systems SL, Barcelona, Spain
- Department of Information and Communication Technologies, Universitat Pompeu Fabra (UPF), Barcelona, Spain
| | - Jakub Vohryzek
- Centre for Brain and Cognition, Computational Neuroscience Group, Department of Information and Communication Technologies, Universitat Pompeu Fabra, Barcelona, Spain
- Centre for Eudaimonia and Human Flourishing, Linacre College, University of Oxford, United Kingdom
| | - Paul F M J Verschure
- Donders Institute for Brain, Cognition and Behavior, Radboud University, Nijmegen, The Netherlands
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29
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Hahamy A, Dubossarsky H, Behrens TEJ. The human brain reactivates context-specific past information at event boundaries of naturalistic experiences. Nat Neurosci 2023; 26:1080-1089. [PMID: 37248340 PMCID: PMC7614642 DOI: 10.1038/s41593-023-01331-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/13/2022] [Accepted: 04/13/2023] [Indexed: 05/31/2023]
Abstract
Although we perceive the world in a continuous manner, our experience is partitioned into discrete events. However, to make sense of these events, they must be stitched together into an overarching narrative-a model of unfolding events. It has been proposed that such a stitching process happens in offline neural reactivations when rodents build models of spatial environments. Here we show that, while understanding a natural narrative, humans reactivate neural representations of past events. Similar to offline replay, these reactivations occur in the hippocampus and default mode network, where reactivations are selective to relevant past events. However, these reactivations occur, not during prolonged offline periods, but at the boundaries between ongoing narrative events. These results, replicated across two datasets, suggest reactivations as a candidate mechanism for binding temporally distant information into a coherent understanding of ongoing experience.
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Affiliation(s)
- Avital Hahamy
- Wellcome Trust Centre for Neuroimaging, UCL Queen Square Institute of Neurology, University College London, London, UK.
| | - Haim Dubossarsky
- School of Electronic Engineering and Computer Science, Queen Mary University of London, London, UK
- Language Technology Laboratory, University of Cambridge, Cambridge, UK
| | - Timothy E J Behrens
- Wellcome Trust Centre for Neuroimaging, UCL Queen Square Institute of Neurology, University College London, London, UK
- Wellcome Centre for Integrative Neuroimaging, University of Oxford, John Radcliffe Hospital, Oxford, UK
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30
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Chen ZS, Wilson MA. How our understanding of memory replay evolves. J Neurophysiol 2023; 129:552-580. [PMID: 36752404 PMCID: PMC9988534 DOI: 10.1152/jn.00454.2022] [Citation(s) in RCA: 9] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/02/2022] [Revised: 01/20/2023] [Accepted: 01/20/2023] [Indexed: 02/09/2023] Open
Abstract
Memory reactivations and replay, widely reported in the hippocampus and cortex across species, have been implicated in memory consolidation, planning, and spatial and skill learning. Technological advances in electrophysiology, calcium imaging, and human neuroimaging techniques have enabled neuroscientists to measure large-scale neural activity with increasing spatiotemporal resolution and have provided opportunities for developing robust analytic methods to identify memory replay. In this article, we first review a large body of historically important and representative memory replay studies from the animal and human literature. We then discuss our current understanding of memory replay functions in learning, planning, and memory consolidation and further discuss the progress in computational modeling that has contributed to these improvements. Next, we review past and present analytic methods for replay analyses and discuss their limitations and challenges. Finally, looking ahead, we discuss some promising analytic methods for detecting nonstereotypical, behaviorally nondecodable structures from large-scale neural recordings. We argue that seamless integration of multisite recordings, real-time replay decoding, and closed-loop manipulation experiments will be essential for delineating the role of memory replay in a wide range of cognitive and motor functions.
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Affiliation(s)
- Zhe Sage Chen
- Department of Psychiatry, New York University Grossman School of Medicine, New York, New York, United States
- Department of Neuroscience and Physiology, New York University Grossman School of Medicine, New York, New York, United States
- Neuroscience Institute, New York University Grossman School of Medicine, New York, New York, United States
- Department of Biomedical Engineering, New York University Tandon School of Engineering, Brooklyn, New York, United States
| | - Matthew A Wilson
- Department of Brain and Cognitive Sciences, Massachusetts Institute of Technology, Cambridge, Massachusetts, United States
- Picower Institute for Learning and Memory, Massachusetts Institute of Technology, Cambridge, Massachusetts, United States
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31
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Yu Y, Oh Y, Kounios J, Beeman M. Uncovering the Interplay of Oscillatory Processes During Creative Problem Solving: A Dynamic Modeling Approach. CREATIVITY RESEARCH JOURNAL 2023; 35:438-454. [PMID: 38145249 PMCID: PMC10745236 DOI: 10.1080/10400419.2023.2172871] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/18/2023]
Abstract
To solve a new problem, people spontaneously engage multiple cognitive processes. Previous work has identified a diverse set of oscillatory components critical at different stages of creative problem solving. In this project, we use hidden state modeling to untangle the roles of oscillation processes over time as people solve puzzles. Building on earlier work, we further developed analytical methods, such as incorporating source separating techniques and identifying the optimal number of states using cross-validation. We extracted brain states characterized by spatio-spectral topographies from time-resolved EEG spectral powers. The data driven approach allowed us to infer the dynamic, trial-by-trial, state sequences, and provided a comprehensive depiction of how various oscillation components interact recurrently throughout the trial. The properties of the states suggest their dissociable cognitive functions. For example, we identified three states with dominant activation in alpha bands but having distinct spatial distributions. People were differentially engaged in these states depending on the stages (e.g., onset or response) and outcomes of the trials (solved with insight or analysis). The current approach, applicable to many tasks requiring extended trial duration, can potentially reconcile findings from previous EEG studies and drive new hypotheses to further our understanding of the complex creative process.
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32
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Wimmer GE, Liu Y, McNamee DC, Dolan RJ. Distinct replay signatures for prospective decision-making and memory preservation. Proc Natl Acad Sci U S A 2023; 120:e2205211120. [PMID: 36719914 PMCID: PMC9963918 DOI: 10.1073/pnas.2205211120] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/29/2022] [Accepted: 12/05/2022] [Indexed: 02/01/2023] Open
Abstract
Theories of neural replay propose that it supports a range of functions, most prominently planning and memory consolidation. Here, we test the hypothesis that distinct signatures of replay in the same task are related to model-based decision-making ("planning") and memory preservation. We designed a reward learning task wherein participants utilized structure knowledge for model-based evaluation, while at the same time had to maintain knowledge of two independent and randomly alternating task environments. Using magnetoencephalography and multivariate analysis, we first identified temporally compressed sequential reactivation, or replay, both prior to choice and following reward feedback. Before choice, prospective replay strength was enhanced for the current task-relevant environment when a model-based planning strategy was beneficial. Following reward receipt, and consistent with a memory preservation role, replay for the alternative distal task environment was enhanced as a function of decreasing recency of experience with that environment. Critically, these planning and memory preservation relationships were selective to pre-choice and post-feedback periods, respectively. Our results provide support for key theoretical proposals regarding the functional role of replay and demonstrate that the relative strength of planning and memory-related signals are modulated by ongoing computational and task demands.
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Affiliation(s)
- G. Elliott Wimmer
- Max Planck University College London Centre for Computational Psychiatry and Ageing Research, University College London, LondonWC1B 5EH, UK
- Wellcome Centre for Human Neuroimaging, University College London, LondonWC1N 3BG, UK
| | - Yunzhe Liu
- State Key Laboratory of Cognitive Neuroscience and Learning, IDG/McGovern Institute for Brain Research, Beijing Normal University, Beijing100875, China
- Chinese Institute for Brain Research, Beijing100875, China
| | - Daniel C. McNamee
- Max Planck University College London Centre for Computational Psychiatry and Ageing Research, University College London, LondonWC1B 5EH, UK
- Wellcome Centre for Human Neuroimaging, University College London, LondonWC1N 3BG, UK
- Neuroscience Programme, Champalimaud Research, Lisbon1400-038, Portugal
| | - Raymond J. Dolan
- Max Planck University College London Centre for Computational Psychiatry and Ageing Research, University College London, LondonWC1B 5EH, UK
- Wellcome Centre for Human Neuroimaging, University College London, LondonWC1N 3BG, UK
- State Key Laboratory of Cognitive Neuroscience and Learning, IDG/McGovern Institute for Brain Research, Beijing Normal University, Beijing100875, China
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33
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Spontaneous mind wandering impairs model-based decision making. PLoS One 2023; 18:e0279532. [PMID: 36701316 PMCID: PMC9879536 DOI: 10.1371/journal.pone.0279532] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/09/2022] [Accepted: 12/08/2022] [Indexed: 01/27/2023] Open
Abstract
BACKGROUND If our attention wanders to other thoughts while making a decision, then the decision might not be directed towards future goals, reflecting a lack of model-based decision making, but may instead be driven by habits, reflecting model-free decision making. Here we aimed to investigate if and how model-based versus model-free decision making is reduced by trait spontaneous mind wandering. METHODS AND FINDINGS We used a sequential two-step Markov decision task and a self-report questionnaire assessing trait spontaneous and deliberate mind wandering propensity, to investigate how trait mind wandering relates to model-free as well as model-based decisions. We estimated parameters of a computational neurocognitive dual-control model of decision making. Analyzing estimated model parameters, we found that trait spontaneous mind wandering was related to impaired model-based decisions, while model-free choice stayed unaffected. CONCLUSIONS Our findings suggest trait spontaneous mind wandering is associated with impaired model-based decision making, and it may reflect model-based offline replay for other tasks (e.g., real-life goals) outside the current lab situation.
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34
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Van de Steen F, Pinotsis D, Devos W, Colenbier N, Bassez I, Friston K, Marinazzo D. Dynamic causal modelling shows a prominent role of local inhibition in alpha power modulation in higher visual cortex. PLoS Comput Biol 2022; 18:e1009988. [PMID: 36574458 PMCID: PMC9829170 DOI: 10.1371/journal.pcbi.1009988] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/03/2022] [Revised: 01/09/2023] [Accepted: 12/16/2022] [Indexed: 12/29/2022] Open
Abstract
During resting-state EEG recordings, alpha activity is more prominent over the posterior cortex in eyes-closed (EC) conditions compared to eyes-open (EO). In this study, we characterized the difference in spectra between EO and EC conditions using dynamic causal modelling. Specifically, we investigated the role of intrinsic and extrinsic connectivity-within the visual cortex-in generating EC-EO alpha power differences over posterior electrodes. The primary visual cortex (V1) and the bilateral middle temporal visual areas (V5) were equipped with bidirectional extrinsic connections using a canonical microcircuit. The states of four intrinsically coupled subpopulations-within each occipital source-were also modelled. Using Bayesian model selection, we tested whether modulations of the intrinsic connections in V1, V5 or extrinsic connections (or a combination thereof) provided the best evidence for the data. In addition, using parametric empirical Bayes (PEB), we estimated group averages under the winning model. Bayesian model selection showed that the winning model contained both extrinsic connectivity modulations, as well as intrinsic connectivity modulations in all sources. The PEB analysis revealed increased extrinsic connectivity during EC. Overall, we found a reduction in the inhibitory intrinsic connections during EC. The results suggest that the intrinsic modulations in V5 played the most important role in producing EC-EO alpha differences, suggesting an intrinsic disinhibition in higher order visual cortex, during EC resting state.
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Affiliation(s)
- Frederik Van de Steen
- Department of Data Analysis, Ghent University, Ghent, Belgium
- Vrije Universiteit Brussel, AIMS laboratory, Brussel, Belgium
- The Wellcome Trust Centre for Neuroimaging, University College London, London, United Kingdom
- * E-mail:
| | - Dimitris Pinotsis
- Centre for Mathematical Neuroscience and Psychology and Department of Psychology, City—University of London, London, United Kingdom
- The Picower Institute for Learning & Memory and Department of Brain and Cognitive Sciences, Massachusetts Institute of Technology, Cambridge, Massachusetts, United States of America
| | - Wouter Devos
- Department of Data Analysis, Ghent University, Ghent, Belgium
| | | | - Iege Bassez
- Department of Data Analysis, Ghent University, Ghent, Belgium
| | - Karl Friston
- The Wellcome Trust Centre for Neuroimaging, University College London, London, United Kingdom
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35
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Pietras B, Schmutz V, Schwalger T. Mesoscopic description of hippocampal replay and metastability in spiking neural networks with short-term plasticity. PLoS Comput Biol 2022; 18:e1010809. [PMID: 36548392 PMCID: PMC9822116 DOI: 10.1371/journal.pcbi.1010809] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/29/2022] [Revised: 01/06/2023] [Accepted: 12/11/2022] [Indexed: 12/24/2022] Open
Abstract
Bottom-up models of functionally relevant patterns of neural activity provide an explicit link between neuronal dynamics and computation. A prime example of functional activity patterns are propagating bursts of place-cell activities called hippocampal replay, which is critical for memory consolidation. The sudden and repeated occurrences of these burst states during ongoing neural activity suggest metastable neural circuit dynamics. As metastability has been attributed to noise and/or slow fatigue mechanisms, we propose a concise mesoscopic model which accounts for both. Crucially, our model is bottom-up: it is analytically derived from the dynamics of finite-size networks of Linear-Nonlinear Poisson neurons with short-term synaptic depression. As such, noise is explicitly linked to stochastic spiking and network size, and fatigue is explicitly linked to synaptic dynamics. To derive the mesoscopic model, we first consider a homogeneous spiking neural network and follow the temporal coarse-graining approach of Gillespie to obtain a "chemical Langevin equation", which can be naturally interpreted as a stochastic neural mass model. The Langevin equation is computationally inexpensive to simulate and enables a thorough study of metastable dynamics in classical setups (population spikes and Up-Down-states dynamics) by means of phase-plane analysis. An extension of the Langevin equation for small network sizes is also presented. The stochastic neural mass model constitutes the basic component of our mesoscopic model for replay. We show that the mesoscopic model faithfully captures the statistical structure of individual replayed trajectories in microscopic simulations and in previously reported experimental data. Moreover, compared to the deterministic Romani-Tsodyks model of place-cell dynamics, it exhibits a higher level of variability regarding order, direction and timing of replayed trajectories, which seems biologically more plausible and could be functionally desirable. This variability is the product of a new dynamical regime where metastability emerges from a complex interplay between finite-size fluctuations and local fatigue.
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Affiliation(s)
- Bastian Pietras
- Institute for Mathematics, Technische Universität Berlin, Berlin, Germany
- Bernstein Center for Computational Neuroscience, Berlin, Germany
- Department of Information and Communication Technologies, Universitat Pompeu Fabra, Barcelona, Spain
| | - Valentin Schmutz
- Brain Mind Institute, School of Computer and Communication Sciences and School of Life Sciences, École Polytechnique Fédérale de Lausanne (EPFL), Lausanne, Switzerland
| | - Tilo Schwalger
- Institute for Mathematics, Technische Universität Berlin, Berlin, Germany
- Bernstein Center for Computational Neuroscience, Berlin, Germany
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36
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Pedrosa R, Nazari M, Mohajerani MH, Knöpfel T, Stella F, Battaglia FP. Hippocampal gamma and sharp wave/ripples mediate bidirectional interactions with cortical networks during sleep. Proc Natl Acad Sci U S A 2022; 119:e2204959119. [PMID: 36279469 PMCID: PMC9636925 DOI: 10.1073/pnas.2204959119] [Citation(s) in RCA: 14] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/28/2022] [Accepted: 08/12/2022] [Indexed: 11/18/2022] Open
Abstract
Hippocampus-neocortex interactions during sleep are critical for memory processes: Hippocampally initiated replay contributes to memory consolidation in the neocortex and hippocampal sharp wave/ripples modulate cortical activity. Yet, the spatial and temporal patterns of this interaction are unknown. With voltage imaging, electrocorticography, and laminarly resolved hippocampal potentials, we characterized cortico-hippocampal signaling during anesthesia and nonrapid eye movement sleep. We observed neocortical activation transients, with statistics suggesting a quasi-critical regime, may be helpful for communication across remote brain areas. From activity transients, we identified, in a data-driven fashion, three functional networks. A network overlapping with the default mode network and centered on retrosplenial cortex was the most associated with hippocampal activity. Hippocampal slow gamma rhythms were strongly associated to neocortical transients, even more than ripples. In fact, neocortical activity predicted hippocampal slow gamma and followed ripples, suggesting that consolidation processes rely on bidirectional signaling between hippocampus and neocortex.
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Affiliation(s)
- Rafael Pedrosa
- Donders Institute for Brain Cognition and Behaviour, Radboud University, 6525AJ Nijmegen, The Netherlands
| | - Mojtaba Nazari
- Canadian Centre for Behavioral Neuroscience, University of Lethbridge, Lethbridge, AB T1K 6 3M4, Canada
| | - Majid H. Mohajerani
- Canadian Centre for Behavioral Neuroscience, University of Lethbridge, Lethbridge, AB T1K 6 3M4, Canada
| | - Thomas Knöpfel
- Laboratory for Neuronal Circuit Dynamics, Imperial College London, London SW7 2AZ, United Kingdom
| | - Federico Stella
- Donders Institute for Brain Cognition and Behaviour, Radboud University, 6525AJ Nijmegen, The Netherlands
| | - Francesco P. Battaglia
- Donders Institute for Brain Cognition and Behaviour, Radboud University, 6525AJ Nijmegen, The Netherlands
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37
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Seedat ZA, Rier L, Gascoyne LE, Cook H, Woolrich MW, Quinn AJ, Roberts TPL, Furlong PL, Armstrong C, St. Pier K, Mullinger KJ, Marsh ED, Brookes MJ, Gaetz W. Mapping Interictal activity in epilepsy using a hidden Markov model: A magnetoencephalography study. Hum Brain Mapp 2022; 44:66-81. [PMID: 36259549 PMCID: PMC9783449 DOI: 10.1002/hbm.26118] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/11/2021] [Revised: 09/19/2022] [Accepted: 09/26/2022] [Indexed: 02/05/2023] Open
Abstract
Epilepsy is a highly heterogeneous neurological disorder with variable etiology, manifestation, and response to treatment. It is imperative that new models of epileptiform brain activity account for this variability, to identify individual needs and allow clinicians to curate personalized care. Here, we use a hidden Markov model (HMM) to create a unique statistical model of interictal brain activity for 10 pediatric patients. We use magnetoencephalography (MEG) data acquired as part of standard clinical care for patients at the Children's Hospital of Philadelphia. These data are routinely analyzed using excess kurtosis mapping (EKM); however, as cases become more complex (extreme multifocal and/or polymorphic activity), they become harder to interpret with EKM. We assessed the performance of the HMM against EKM for three patient groups, with increasingly complicated presentation. The difference in localization of epileptogenic foci for the two methods was 7 ± 2 mm (mean ± SD over all 10 patients); and 94% ± 13% of EKM temporal markers were matched by an HMM state visit. The HMM localizes epileptogenic areas (in agreement with EKM) and provides additional information about the relationship between those areas. A key advantage over current methods is that the HMM is a data-driven model, so the output is tuned to each individual. Finally, the model output is intuitive, allowing a user (clinician) to review the result and manually select the HMM epileptiform state, offering multiple advantages over previous methods and allowing for broader implementation of MEG epileptiform analysis in surgical decision-making for patients with intractable epilepsy.
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Affiliation(s)
- Zelekha A. Seedat
- Sir Peter Mansfield Imaging Centre, School of Physics and AstronomyUniversity of NottinghamNottinghamUK,Young EpilepsySt Pier's LaneLingfieldRH7 6PWUK
| | - Lukas Rier
- Sir Peter Mansfield Imaging Centre, School of Physics and AstronomyUniversity of NottinghamNottinghamUK
| | - Lauren E. Gascoyne
- Sir Peter Mansfield Imaging Centre, School of Physics and AstronomyUniversity of NottinghamNottinghamUK
| | - Harry Cook
- Sir Peter Mansfield Imaging Centre, School of Physics and AstronomyUniversity of NottinghamNottinghamUK
| | - Mark W. Woolrich
- Oxford Centre for Human Brain ActivityUniversity Department of Psychiatry, Warneford HospitalOxfordUK
| | - Andrew J. Quinn
- Oxford Centre for Human Brain ActivityUniversity Department of Psychiatry, Warneford HospitalOxfordUK
| | - Timothy P. L. Roberts
- Department of RadiologyChildren's Hospital of PhiladelphiaPhiladelphiaPennsylvaniaUSA
| | | | - Caren Armstrong
- Department of RadiologyChildren's Hospital of PhiladelphiaPhiladelphiaPennsylvaniaUSA,Pediatric Epilepsy Program, Division of Child NeurologyCHOPPhiladelphiaPennsylvaniaUSA
| | | | - Karen J. Mullinger
- Sir Peter Mansfield Imaging Centre, School of Physics and AstronomyUniversity of NottinghamNottinghamUK,Centre for Human Brain Health, School of PsychologyUniversity of BirminghamBirminghamUK
| | - Eric D. Marsh
- Department of RadiologyChildren's Hospital of PhiladelphiaPhiladelphiaPennsylvaniaUSA,Pediatric Epilepsy Program, Division of Child NeurologyCHOPPhiladelphiaPennsylvaniaUSA,Departments of Neurology and PaediatricsUniversity of Pennsylvania Perelman School of MedicinePhiladelphiaPennsylvaniaUSA
| | - Matthew J. Brookes
- Sir Peter Mansfield Imaging Centre, School of Physics and AstronomyUniversity of NottinghamNottinghamUK
| | - William Gaetz
- Department of RadiologyChildren's Hospital of PhiladelphiaPhiladelphiaPennsylvaniaUSA
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38
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Higgins C, van Es MWJ, Quinn AJ, Vidaurre D, Woolrich MW. The relationship between frequency content and representational dynamics in the decoding of neurophysiological data. Neuroimage 2022; 260:119462. [PMID: 35872176 PMCID: PMC10565838 DOI: 10.1016/j.neuroimage.2022.119462] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/03/2022] [Revised: 07/04/2022] [Accepted: 07/08/2022] [Indexed: 11/20/2022] Open
Abstract
Decoding of high temporal resolution, stimulus-evoked neurophysiological data is increasingly used to test theories about how the brain processes information. However, a fundamental relationship between the frequency spectra of the neural signal and the subsequent decoding accuracy timecourse is not widely recognised. We show that, in commonly used instantaneous signal decoding paradigms, each sinusoidal component of the evoked response is translated to double its original frequency in the subsequent decoding accuracy timecourses. We therefore recommend, where researchers use instantaneous signal decoding paradigms, that more aggressive low pass filtering is applied with a cut-off at one quarter of the sampling rate, to eliminate representational alias artefacts. However, this does not negate the accompanying interpretational challenges. We show that these can be resolved by decoding paradigms that utilise both a signal's instantaneous magnitude and its local gradient information as features for decoding. On a publicly available MEG dataset, this results in decoding accuracy metrics that are higher, more stable over time, and free of the technical and interpretational challenges previously characterised. We anticipate that a broader awareness of these fundamental relationships will enable stronger interpretations of decoding results by linking them more clearly to the underlying signal characteristics that drive them.
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Affiliation(s)
- Cameron Higgins
- Oxford Centre for Human Brain Activity, Wellcome Centre for Integrative Neuroimaging, Department of Psychiatry, University of Oxford, Oxford, UK
| | - Mats W J van Es
- Oxford Centre for Human Brain Activity, Wellcome Centre for Integrative Neuroimaging, Department of Psychiatry, University of Oxford, Oxford, UK.
| | - Andrew J Quinn
- Oxford Centre for Human Brain Activity, Wellcome Centre for Integrative Neuroimaging, Department of Psychiatry, University of Oxford, Oxford, UK
| | - Diego Vidaurre
- Oxford Centre for Human Brain Activity, Wellcome Centre for Integrative Neuroimaging, Department of Psychiatry, University of Oxford, Oxford, UK; Center of Functionally Integrative Neuroscience, Department of Clinical Medicine, Aarhus University, Aarhus, Denmark
| | - Mark W Woolrich
- Oxford Centre for Human Brain Activity, Wellcome Centre for Integrative Neuroimaging, Department of Psychiatry, University of Oxford, Oxford, UK
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39
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Folvik L, Sneve MH, Ness HT, Vidal-Piñeiro D, Raud L, Geier OM, Walhovd KB, Fjell AM. Sustained upregulation of widespread hippocampal-neocortical coupling following memory encoding. Cereb Cortex 2022; 33:4844-4858. [PMID: 36190442 PMCID: PMC10110434 DOI: 10.1093/cercor/bhac384] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/11/2022] [Revised: 08/29/2022] [Accepted: 08/30/2022] [Indexed: 11/14/2022] Open
Abstract
Systems consolidation of new experiences into lasting episodic memories involves hippocampal-neocortical interactions. Evidence of this process is already observed during early post-encoding rest periods, both as increased hippocampal coupling with task-relevant perceptual regions and reactivation of stimulus-specific patterns following intensive encoding tasks. We investigate the spatial and temporal characteristics of these hippocampally anchored post-encoding neocortical modulations. Eighty-nine adults participated in an experiment consisting of interleaved memory task- and resting-state periods. We observed increased post-encoding functional connectivity between hippocampus and individually localized neocortical regions responsive to stimuli encountered during memory encoding. Post-encoding modulations were manifested as a nearly system-wide upregulation in hippocampal coupling with all major functional networks. The configuration of these extensive modulations resembled hippocampal-neocortical interaction patterns estimated from active encoding operations, suggesting hippocampal post-encoding involvement exceeds perceptual aspects. Reinstatement of encoding patterns was not observed in resting-state scans collected 12 h later, nor when using other candidate seed regions. The similarity in hippocampal functional coupling between online memory encoding and offline post-encoding rest suggests reactivation in humans involves a spectrum of cognitive processes engaged during the experience of an event. There were no age effects, suggesting that upregulation of hippocampal-neocortical connectivity represents a general phenomenon seen across the adult lifespan.
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Affiliation(s)
- Line Folvik
- Department of Psychology, Center for Lifespan Changes in Brain and Cognition, University of Oslo, Forskningsveien 3A, 0373 Oslo, Norway
| | - Markus H Sneve
- Department of Psychology, Center for Lifespan Changes in Brain and Cognition, University of Oslo, Forskningsveien 3A, 0373 Oslo, Norway
| | - Hedda T Ness
- Department of Psychology, Center for Lifespan Changes in Brain and Cognition, University of Oslo, Forskningsveien 3A, 0373 Oslo, Norway
| | - Didac Vidal-Piñeiro
- Department of Psychology, Center for Lifespan Changes in Brain and Cognition, University of Oslo, Forskningsveien 3A, 0373 Oslo, Norway
| | - Liisa Raud
- Department of Psychology, Center for Lifespan Changes in Brain and Cognition, University of Oslo, Forskningsveien 3A, 0373 Oslo, Norway
| | - Oliver M Geier
- Department of Diagnostic Physics, Oslo University Hospital, Postbox 4950 Nydalen, OUS, Rikshospitalet, 0424 Oslo, Norway
| | - Kristine B Walhovd
- Department of Psychology, Center for Lifespan Changes in Brain and Cognition, University of Oslo, Forskningsveien 3A, 0373 Oslo, Norway.,Division of Radiology and Nuclear Medicine, Oslo University Hospital, Postbox 4950 Nydalen, OUS, Rikshospitalet, 0424 Oslo, Norway
| | - Anders M Fjell
- Department of Psychology, Center for Lifespan Changes in Brain and Cognition, University of Oslo, Forskningsveien 3A, 0373 Oslo, Norway.,Division of Radiology and Nuclear Medicine, Oslo University Hospital, Postbox 4950 Nydalen, OUS, Rikshospitalet, 0424 Oslo, Norway
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40
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Gohil C, Roberts E, Timms R, Skates A, Higgins C, Quinn A, Pervaiz U, van Amersfoort J, Notin P, Gal Y, Adaszewski S, Woolrich M. Mixtures of large-scale dynamic functional brain network modes. Neuroimage 2022; 263:119595. [PMID: 36041643 DOI: 10.1016/j.neuroimage.2022.119595] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/04/2022] [Revised: 08/12/2022] [Accepted: 08/26/2022] [Indexed: 10/31/2022] Open
Abstract
Accurate temporal modelling of functional brain networks is essential in the quest for understanding how such networks facilitate cognition. Researchers are beginning to adopt time-varying analyses for electrophysiological data that capture highly dynamic processes on the order of milliseconds. Typically, these approaches, such as clustering of functional connectivity profiles and Hidden Markov Modelling (HMM), assume mutual exclusivity of networks over time. Whilst a powerful constraint, this assumption may be compromising the ability of these approaches to describe the data effectively. Here, we propose a new generative model for functional connectivity as a time-varying linear mixture of spatially distributed statistical "modes". The temporal evolution of this mixture is governed by a recurrent neural network, which enables the model to generate data with a rich temporal structure. We use a Bayesian framework known as amortised variational inference to learn model parameters from observed data. We call the approach DyNeMo (for Dynamic Network Modes), and show using simulations it outperforms the HMM when the assumption of mutual exclusivity is violated. In resting-state MEG, DyNeMo reveals a mixture of modes that activate on fast time scales of 100-150 ms, which is similar to state lifetimes found using an HMM. In task MEG data, DyNeMo finds modes with plausible, task-dependent evoked responses without any knowledge of the task timings. Overall, DyNeMo provides decompositions that are an approximate remapping of the HMM's while showing improvements in overall explanatory power. However, the magnitude of the improvements suggests that the HMM's assumption of mutual exclusivity can be reasonable in practice. Nonetheless, DyNeMo provides a flexible framework for implementing and assessing future modelling developments.
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Affiliation(s)
- Chetan Gohil
- Oxford Centre for Human Brain Activity (OHBA), Wellcome Centre for Integrative Neuroimaging, Department of Psychiatry, University of Oxford, Oxford, OX3 7JX, United Kingdom
| | - Evan Roberts
- Oxford Centre for Human Brain Activity (OHBA), Wellcome Centre for Integrative Neuroimaging, Department of Psychiatry, University of Oxford, Oxford, OX3 7JX, United Kingdom
| | - Ryan Timms
- Oxford Centre for Human Brain Activity (OHBA), Wellcome Centre for Integrative Neuroimaging, Department of Psychiatry, University of Oxford, Oxford, OX3 7JX, United Kingdom
| | - Alex Skates
- Oxford Centre for Human Brain Activity (OHBA), Wellcome Centre for Integrative Neuroimaging, Department of Psychiatry, University of Oxford, Oxford, OX3 7JX, United Kingdom
| | - Cameron Higgins
- Oxford Centre for Human Brain Activity (OHBA), Wellcome Centre for Integrative Neuroimaging, Department of Psychiatry, University of Oxford, Oxford, OX3 7JX, United Kingdom
| | - Andrew Quinn
- Oxford Centre for Human Brain Activity (OHBA), Wellcome Centre for Integrative Neuroimaging, Department of Psychiatry, University of Oxford, Oxford, OX3 7JX, United Kingdom
| | - Usama Pervaiz
- Oxford Centre for Functional MRI of the Brain (FMRIB), Wellcome Centre for Integrative Neuroimaging, Nuffield Department of Clinical Neurosciences, University of Oxford, Oxford OX3 9DU, United Kingdom
| | - Joost van Amersfoort
- Oxford Applied and Theoretical Machine Learning (OATML), Department of Computer Science, University of Oxford, Oxford, OX1 3QD, United Kingdom
| | - Pascal Notin
- Oxford Applied and Theoretical Machine Learning (OATML), Department of Computer Science, University of Oxford, Oxford, OX1 3QD, United Kingdom
| | - Yarin Gal
- Oxford Applied and Theoretical Machine Learning (OATML), Department of Computer Science, University of Oxford, Oxford, OX1 3QD, United Kingdom
| | - Stanislaw Adaszewski
- Pharma Research and Early Development Operations, Roche Innovation Center Basel, F. Hoffman - La Roche AG, Basel CH-4070, Switzerland
| | - Mark Woolrich
- Oxford Centre for Human Brain Activity (OHBA), Wellcome Centre for Integrative Neuroimaging, Department of Psychiatry, University of Oxford, Oxford, OX3 7JX, United Kingdom
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41
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Nour MM, Liu Y, Dolan RJ. Functional neuroimaging in psychiatry and the case for failing better. Neuron 2022; 110:2524-2544. [PMID: 35981525 DOI: 10.1016/j.neuron.2022.07.005] [Citation(s) in RCA: 33] [Impact Index Per Article: 16.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/03/2022] [Revised: 06/06/2022] [Accepted: 07/08/2022] [Indexed: 12/27/2022]
Abstract
Psychiatric disorders encompass complex aberrations of cognition and affect and are among the most debilitating and poorly understood of any medical condition. Current treatments rely primarily on interventions that target brain function (drugs) or learning processes (psychotherapy). A mechanistic understanding of how these interventions mediate their therapeutic effects remains elusive. From the early 1990s, non-invasive functional neuroimaging, coupled with parallel developments in the cognitive neurosciences, seemed to signal a new era of neurobiologically grounded diagnosis and treatment in psychiatry. Yet, despite three decades of intense neuroimaging research, we still lack a neurobiological account for any psychiatric condition. Likewise, functional neuroimaging plays no role in clinical decision making. Here, we offer a critical commentary on this impasse and suggest how the field might fare better and deliver impactful neurobiological insights.
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Affiliation(s)
- Matthew M Nour
- Max Planck University College London Centre for Computational Psychiatry and Ageing Research, London WC1B 5EH, UK; Wellcome Trust Centre for Human Neuroimaging, University College London, London WC1N 3AR, UK; Department of Psychiatry, University of Oxford, Oxford OX3 7JX, UK.
| | - Yunzhe Liu
- Max Planck University College London Centre for Computational Psychiatry and Ageing Research, London WC1B 5EH, UK; State Key Laboratory of Cognitive Neuroscience and Learning, IDG/McGovern Institute for Brain Research, Beijing Normal University, Beijing 100875, China; Chinese Institute for Brain Research, Beijing 102206, China
| | - Raymond J Dolan
- Max Planck University College London Centre for Computational Psychiatry and Ageing Research, London WC1B 5EH, UK; Wellcome Trust Centre for Human Neuroimaging, University College London, London WC1N 3AR, UK; State Key Laboratory of Cognitive Neuroscience and Learning, IDG/McGovern Institute for Brain Research, Beijing Normal University, Beijing 100875, China.
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42
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Replay, the default mode network and the cascaded memory systems model. Nat Rev Neurosci 2022; 23:628-640. [PMID: 35970912 DOI: 10.1038/s41583-022-00620-6] [Citation(s) in RCA: 32] [Impact Index Per Article: 16.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 07/07/2022] [Indexed: 12/25/2022]
Abstract
The spontaneous replay of patterns of activity related to past experiences and memories is a striking feature of brain activity, as is the coherent activation of sets of brain areas - particularly those comprising the default mode network (DMN) - during rest. We propose that these two phenomena are strongly intertwined and that their potential functions overlap. In the 'cascaded memory systems model' that we outline here, we hypothesize that the DMN forms the backbone for the propagation of replay, mediating interactions between the hippocampus and the neocortex that enable the consolidation of new memories. The DMN may also independently ignite replay cascades, which support reactivation of older memories or high-level semantic representations. We suggest that transient cortical activations, inducing long-range correlations across the neocortex, are a key mechanism supporting a hierarchy of representations that progresses from simple percepts to semantic representations of causes and, finally, to whole episodes.
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43
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Higgins C, Vidaurre D, Kolling N, Liu Y, Behrens T, Woolrich M. Spatiotemporally resolved multivariate pattern analysis for M/EEG. Hum Brain Mapp 2022; 43:3062-3085. [PMID: 35302683 PMCID: PMC9188977 DOI: 10.1002/hbm.25835] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/28/2021] [Revised: 02/14/2022] [Accepted: 02/27/2022] [Indexed: 11/15/2022] Open
Abstract
An emerging goal in neuroscience is tracking what information is represented in brain activity over time as a participant completes some task. While electroencephalography (EEG) and magnetoencephalography (MEG) offer millisecond temporal resolution of how activity patterns emerge and evolve, standard decoding methods present significant barriers to interpretability as they obscure the underlying spatial and temporal activity patterns. We instead propose the use of a generative encoding model framework that simultaneously infers the multivariate spatial patterns of activity and the variable timing at which these patterns emerge on individual trials. An encoding model inversion maps from these parameters to the equivalent decoding model, allowing predictions to be made about unseen test data in the same way as in standard decoding methodology. These SpatioTemporally Resolved MVPA (STRM) models can be flexibly applied to a wide variety of experimental paradigms, including classification and regression tasks. We show that these models provide insightful maps of the activity driving predictive accuracy metrics; demonstrate behaviourally meaningful variation in the timing of pattern emergence on individual trials; and achieve predictive accuracies that are either equivalent or surpass those achieved by more widely used methods. This provides a new avenue for investigating the brain's representational dynamics and could ultimately support more flexible experimental designs in the future.
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Affiliation(s)
- Cameron Higgins
- Wellcome Centre for Integrative NeuroimagingUniversity of OxfordOxfordUK
- Department of PsychiatryUniversity of OxfordOxfordUK
| | - Diego Vidaurre
- Department of PsychiatryUniversity of OxfordOxfordUK
- Center of Functionally Integrative Neuroscience, Department of Clinical MedicineAarhus UniversityAarhusDenmark
| | - Nils Kolling
- Wellcome Centre for Integrative NeuroimagingUniversity of OxfordOxfordUK
| | - Yunzhe Liu
- State Key Laboratory of Cognitive Neuroscience and Learning, IDG/McGovern Institute for Brain ResearchBeijing Normal UniversityBeijingChina
- Chinese Institute for Brain ResearchBeijingChina
- Max Planck University College London Centre for Computational Psychiatry and Ageing ResearchUniversity College LondonLondonUK
| | - Tim Behrens
- Wellcome Centre for Integrative NeuroimagingUniversity of OxfordOxfordUK
- Wellcome Trust Centre for NeuroimagingUniversity College LondonLondonUK
| | - Mark Woolrich
- Wellcome Centre for Integrative NeuroimagingUniversity of OxfordOxfordUK
- Department of PsychiatryUniversity of OxfordOxfordUK
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44
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Pervaiz U, Vidaurre D, Gohil C, Smith SM, Woolrich MW. Multi-dynamic modelling reveals strongly time-varying resting fMRI correlations. Med Image Anal 2022; 77:102366. [PMID: 35131700 PMCID: PMC8907871 DOI: 10.1016/j.media.2022.102366] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/23/2021] [Revised: 10/29/2021] [Accepted: 01/10/2022] [Indexed: 11/23/2022]
Abstract
The activity of functional brain networks is responsible for the emergence of time-varying cognition and behaviour. Accordingly, time-varying correlations (Functional Connectivity) in resting fMRI have been shown to be predictive of behavioural traits, and psychiatric and neurological conditions. Typically, methods that measure time varying Functional Connectivity (FC), such as sliding windows approaches, do not separately model when changes occur in the mean activity levels from when changes occur in the FC, therefore conflating these two distinct types of modulation. We show that this can bias the estimation of time-varying FC to appear more stable over time than it actually is. Here, we propose an alternative approach that models changes in the mean brain activity and in the FC as being able to occur at different times to each other. We refer to this method as the Multi-dynamic Adversarial Generator Encoder (MAGE) model, which includes a model of the network dynamics that captures long-range time dependencies, and is estimated on fMRI data using principles of Generative Adversarial Networks. We evaluated the approach across several simulation studies and resting fMRI data from the Human Connectome Project (1003 subjects), as well as from UK Biobank (13301 subjects). Importantly, we find that separating fluctuations in the mean activity levels from those in the FC reveals much stronger changes in FC over time, and is a better predictor of individual behavioural variability.
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Affiliation(s)
- Usama Pervaiz
- Oxford Centre for Functional MRI of the Brain (FMRIB), Wellcome Centre for Integrative Neuroimaging, Nuffield Department of Clinical Neurosciences, University of Oxford, Oxford OX3 9DU, United Kingdom.
| | - Diego Vidaurre
- Oxford Centre for Human Brain Activity (OHBA), Wellcome Centre for Integrative Neuroimaging, Department of Psychiatry, University of Oxford, Oxford, OX3 7JX, United Kingdom; Department of Clinical Medicine, Aarhus University, Denmark
| | - Chetan Gohil
- Oxford Centre for Human Brain Activity (OHBA), Wellcome Centre for Integrative Neuroimaging, Department of Psychiatry, University of Oxford, Oxford, OX3 7JX, United Kingdom
| | - Stephen M Smith
- Oxford Centre for Functional MRI of the Brain (FMRIB), Wellcome Centre for Integrative Neuroimaging, Nuffield Department of Clinical Neurosciences, University of Oxford, Oxford OX3 9DU, United Kingdom
| | - Mark W Woolrich
- Oxford Centre for Human Brain Activity (OHBA), Wellcome Centre for Integrative Neuroimaging, Department of Psychiatry, University of Oxford, Oxford, OX3 7JX, United Kingdom
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45
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Roshchupkina L, Wens V, Coquelet N, de Tiege X, Peigneux P. Resting state fast brain dynamics predict interindividual variability in motor performance. Sci Rep 2022; 12:5340. [PMID: 35351907 PMCID: PMC8964712 DOI: 10.1038/s41598-022-08767-z] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/12/2021] [Accepted: 03/07/2022] [Indexed: 11/09/2022] Open
Abstract
Motor learning features rapid enhancement during practice then offline post-practice gains with the reorganization of related brain networks. We hypothesised that fast transient, sub-second variations in magnetoencephalographic (MEG) network activity during the resting-state (RS) reflect early learning-related plasticity mechanisms and/or interindividual motor variability in performance. MEG RS activity was recorded before and 20 min after motor learning. Hidden Markov modelling (HMM) of MEG power envelope signals highlighted 8 recurrent topographical states. For two states, motor performance levels were associated with HMM temporal parameters both in pre- and post-learning resting-state sessions. However, no association emerged with offline changes in performance. These results suggest a trait-like relationship between spontaneous transient neural dynamics at rest and interindividual variations in motor abilities. On the other hand, transient RS dynamics seem not to be state-dependent, i.e., modulated by learning experience and reflect neural plasticity, at least on the short timescale.
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Affiliation(s)
- Liliia Roshchupkina
- UR2NF-Neuropsychology and Functional Neuroimaging Research Unit affiliated at CRCN - Centre for Research in Cognition and Neurosciences, Avenue F.D. Roosevelt 50, 1050, Bruxelles, Belgium. .,UNI-ULB Neuroscience Institute, Université Libre de Bruxelles (ULB), Avenue F.D. Roosevelt 50, 1050, Bruxelles, Belgium. .,Laboratoire de Cartographie Fonctionnelle du Cerveau (LCFC), Université Libre de Bruxelles (ULB), Brussels, Belgium.
| | - Vincent Wens
- Laboratoire de Cartographie Fonctionnelle du Cerveau (LCFC), Université Libre de Bruxelles (ULB), Brussels, Belgium.,Department of Functional Neuroimaging, Service of Nuclear Medicine, CUB Hôpital Erasme, Université Libre de Bruxelles (ULB), Brussels, Belgium
| | - Nicolas Coquelet
- Laboratoire de Cartographie Fonctionnelle du Cerveau (LCFC), Université Libre de Bruxelles (ULB), Brussels, Belgium.,Department of Functional Neuroimaging, Service of Nuclear Medicine, CUB Hôpital Erasme, Université Libre de Bruxelles (ULB), Brussels, Belgium
| | - Xavier de Tiege
- UR2NF-Neuropsychology and Functional Neuroimaging Research Unit affiliated at CRCN - Centre for Research in Cognition and Neurosciences, Avenue F.D. Roosevelt 50, 1050, Bruxelles, Belgium.,Laboratoire de Cartographie Fonctionnelle du Cerveau (LCFC), Université Libre de Bruxelles (ULB), Brussels, Belgium.,Department of Functional Neuroimaging, Service of Nuclear Medicine, CUB Hôpital Erasme, Université Libre de Bruxelles (ULB), Brussels, Belgium
| | - Philippe Peigneux
- UR2NF-Neuropsychology and Functional Neuroimaging Research Unit affiliated at CRCN - Centre for Research in Cognition and Neurosciences, Avenue F.D. Roosevelt 50, 1050, Bruxelles, Belgium.,UNI-ULB Neuroscience Institute, Université Libre de Bruxelles (ULB), Avenue F.D. Roosevelt 50, 1050, Bruxelles, Belgium
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46
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Abstract
In human neuroscience, studies of cognition are rarely grounded in non-task-evoked, 'spontaneous' neural activity. Indeed, studies of spontaneous activity tend to focus predominantly on intrinsic neural patterns (for example, resting-state networks). Taking a 'representation-rich' approach bridges the gap between cognition and resting-state communities: this approach relies on decoding task-related representations from spontaneous neural activity, allowing quantification of the representational content and rich dynamics of such activity. For example, if we know the neural representation of an episodic memory, we can decode its subsequent replay during rest. We argue that such an approach advances cognitive research beyond a focus on immediate task demand and provides insight into the functional relevance of the intrinsic neural pattern (for example, the default mode network). This in turn enables a greater integration between human and animal neuroscience, facilitating experimental testing of theoretical accounts of intrinsic activity, and opening new avenues of research in psychiatry.
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47
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Arzy S, Kaplan R. Transforming Social Perspectives with Cognitive Maps. Soc Cogn Affect Neurosci 2022; 17:939-955. [PMID: 35257155 PMCID: PMC9527473 DOI: 10.1093/scan/nsac017] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/30/2021] [Revised: 12/17/2021] [Accepted: 03/07/2022] [Indexed: 01/29/2023] Open
Abstract
Growing evidence suggests that cognitive maps represent relations between social knowledge similar to how spatial locations are represented in an environment. Notably, the extant human medial temporal lobe literature assumes associations between social stimuli follow a linear associative mapping from an egocentric viewpoint to a cognitive map. Yet, this form of associative social memory doesn't account for a core phenomenon of social interactions in which social knowledge learned via comparisons to the self, other individuals, or social networks are assimilated within a single frame of reference. We argue that hippocampal-entorhinal coordinate transformations, known to integrate egocentric and allocentric spatial cues, inform social perspective switching between the self and others. We present evidence that the hippocampal formation helps inform social interactions by relating self versus other social attribute comparisons to society in general, which can afford rapid and flexible assimilation of knowledge about the relationship between the self and social networks of varying proximities. We conclude by discussing the ramifications of cognitive maps in aiding this social perspective transformation process in states of health and disease.
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Affiliation(s)
- Shahar Arzy
- Faculty of Medicine and the Department of Cognitive Sciences, Hebrew University of Jerusalem, Jerusalem 91120, Israel
- Department of Neurology, Hadassah Hebrew University Medical School, Jerusalem 91120, Israel
| | - Raphael Kaplan
- Correspondence should be addressed to Raphael Kaplan, Department of Basic Psychology, Clinical Psychology, and Psychobiology, Universitat Jaume I, Avinguda de Vicent Sos Baynat, Castelló de la Plana, Spain. E-mail:
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48
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Dai ZH, Xu X, Chen WQ, Nie LN, Liu Y, Sui N, Liang J. The role of hippocampus in memory reactivation: an implication for a therapeutic target against opioid use disorder. CURRENT ADDICTION REPORTS 2022; 9:67-79. [PMID: 35223369 PMCID: PMC8857535 DOI: 10.1007/s40429-022-00407-w] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 01/16/2022] [Indexed: 12/29/2022]
Abstract
Purpose of the review The abuse of opioids induces many terrible problems in human health and social stability. For opioid-dependent individuals, withdrawal memory can be reactivated by context, which is then associated with extremely unpleasant physical and emotional feelings during opioid withdrawal. The reactivation of withdrawal memory is considered one of the most important reasons for opioid relapse, and it also allows for memory modulation based on the reconsolidation phenomenon. However, studies exploring withdrawal memory modulation during the reconsolidation window are lacking. By summarizing the previous findings about the reactivation of negative emotional memories, we are going to suggest potential neural regions and systems for modulating opioid withdrawal memory. Recent findings Here, we first present the role of memory reactivation in its modification, discuss how the hippocampus participates in memory reactivation, and discuss the importance of noradrenergic signaling in the hippocampus for memory reactivation. Then, we review the engagement of other limbic regions receiving noradrenergic signaling in memory reactivation. We suggest that noradrenergic signaling targeting hippocampus neurons might play a potential role in strengthening the disruptive effect of withdrawal memory extinction by facilitating the degree of memory reactivation. Summary This review will contribute to a better understanding of the mechanisms underlying reactivation-dependent memory malleability and will provide new therapeutic avenues for treating opioid use disorders.
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Affiliation(s)
- Zhong-hua Dai
- CAS Key Laboratory of Mental Health, Institute of Psychology, Chinese Academy of Sciences, Beijing, China
- Department of Psychology, University of Chinese Academy of Sciences, Beijing, China
| | - Xing Xu
- CAS Key Laboratory of Mental Health, Institute of Psychology, Chinese Academy of Sciences, Beijing, China
- Department of Psychology, University of Chinese Academy of Sciences, Beijing, China
| | - Wei-qi Chen
- CAS Key Laboratory of Mental Health, Institute of Psychology, Chinese Academy of Sciences, Beijing, China
- Department of Psychology, University of Chinese Academy of Sciences, Beijing, China
- Sino-Danish College, University of Chinese Academy of Sciences, Beijing, China
| | - Li-na Nie
- CAS Key Laboratory of Mental Health, Institute of Psychology, Chinese Academy of Sciences, Beijing, China
- Department of Psychology, University of Chinese Academy of Sciences, Beijing, China
| | - Ying Liu
- CAS Key Laboratory of Mental Health, Institute of Psychology, Chinese Academy of Sciences, Beijing, China
- Department of Psychology, University of Chinese Academy of Sciences, Beijing, China
| | - Nan Sui
- CAS Key Laboratory of Mental Health, Institute of Psychology, Chinese Academy of Sciences, Beijing, China
- Department of Psychology, University of Chinese Academy of Sciences, Beijing, China
| | - Jing Liang
- CAS Key Laboratory of Mental Health, Institute of Psychology, Chinese Academy of Sciences, Beijing, China
- Department of Psychology, University of Chinese Academy of Sciences, Beijing, China
- Sino-Danish College, University of Chinese Academy of Sciences, Beijing, China
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49
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Sadaghiani S, Brookes MJ, Baillet S. Connectomics of human electrophysiology. Neuroimage 2022; 247:118788. [PMID: 34906715 PMCID: PMC8943906 DOI: 10.1016/j.neuroimage.2021.118788] [Citation(s) in RCA: 49] [Impact Index Per Article: 24.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/15/2021] [Revised: 11/03/2021] [Accepted: 12/06/2021] [Indexed: 12/15/2022] Open
Abstract
We present both a scientific overview and conceptual positions concerning the challenges and assets of electrophysiological measurements in the search for the nature and functions of the human connectome. We discuss how the field has been inspired by findings and approaches from functional magnetic resonance imaging (fMRI) and informed by a small number of significant multimodal empirical studies, which show that the canonical networks that are commonplace in fMRI are in fact rooted in electrophysiological processes. This review is also an opportunity to produce a brief, up-to-date critical survey of current data modalities and analytical methods available for deriving both static and dynamic connectomes from electrophysiology. We review hurdles that challenge the significance and impact of current electrophysiology connectome research. We then encourage the field to take a leap of faith and embrace the wealth of electrophysiological signals, despite their apparent, disconcerting complexity. Our position is that electrophysiology connectomics is poised to inform testable mechanistic models of information integration in hierarchical brain networks, constructed from observable oscillatory and aperiodic signal components and their polyrhythmic interactions.
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Affiliation(s)
- Sepideh Sadaghiani
- Department of Psychology, University of Illinois, Urbana-Champaign, IL, United States; Beckman Institute for Advanced Science and Technology, University of Illinois, Urbana-Champaign, IL, United States
| | - Matthew J Brookes
- Sir Peter Mansfield Imaging Centre, School of Physics and Astronomy, University of Nottingham, University Park, Nottingham NG72RD, United Kingdom
| | - Sylvain Baillet
- McConnell Brain Imaging Centre, Montreal Neurological Institute, McGill University, Montreal, QC, Canada
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50
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Nyberg N, Duvelle É, Barry C, Spiers HJ. Spatial goal coding in the hippocampal formation. Neuron 2022; 110:394-422. [PMID: 35032426 DOI: 10.1016/j.neuron.2021.12.012] [Citation(s) in RCA: 49] [Impact Index Per Article: 24.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/02/2021] [Revised: 10/18/2021] [Accepted: 12/08/2021] [Indexed: 12/22/2022]
Abstract
The mammalian hippocampal formation contains several distinct populations of neurons involved in representing self-position and orientation. These neurons, which include place, grid, head direction, and boundary-vector cells, are thought to collectively instantiate cognitive maps supporting flexible navigation. However, to flexibly navigate, it is necessary to also maintain internal representations of goal locations, such that goal-directed routes can be planned and executed. Although it has remained unclear how the mammalian brain represents goal locations, multiple neural candidates have recently been uncovered during different phases of navigation. For example, during planning, sequential activation of spatial cells may enable simulation of future routes toward the goal. During travel, modulation of spatial cells by the prospective route, or by distance and direction to the goal, may allow maintenance of route and goal-location information, supporting navigation on an ongoing basis. As the goal is approached, an increased activation of spatial cells may enable the goal location to become distinctly represented within cognitive maps, aiding goal localization. Lastly, after arrival at the goal, sequential activation of spatial cells may represent the just-taken route, enabling route learning and evaluation. Here, we review and synthesize these and other evidence for goal coding in mammalian brains, relate the experimental findings to predictions from computational models, and discuss outstanding questions and future challenges.
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Affiliation(s)
- Nils Nyberg
- Institute of Behavioural Neuroscience, Department of Experimental Psychology, University College London, London, UK.
| | - Éléonore Duvelle
- Department of Psychological and Brain Sciences, Dartmouth College, Hanover, NH, USA
| | - Caswell Barry
- Department of Cell and Developmental Biology, University College London, London, UK
| | - Hugo J Spiers
- Institute of Behavioural Neuroscience, Department of Experimental Psychology, University College London, London, UK.
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