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Sportes A, Hériché M, Mounier A, Durney C, van Tuinen D, Trouvelot S, Wipf D, Courty PE. Comparative RNA sequencing-based transcriptome profiling of ten grapevine rootstocks: shared and specific sets of genes respond to mycorrhizal symbiosis. MYCORRHIZA 2023; 33:369-385. [PMID: 37561219 DOI: 10.1007/s00572-023-01119-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/30/2023] [Accepted: 06/23/2023] [Indexed: 08/11/2023]
Abstract
Arbuscular mycorrhizal symbiosis improves water and nutrient uptake by plants and provides them other ecosystem services. Grapevine is one of the major crops in the world. Vitis vinifera scions generally are grafted onto a variety of rootstocks that confer different levels of resistance against different pests, tolerance to environmental stress, and influence the physiology of the scions. Arbuscular mycorrhizal fungi are involved in the root architecture and in the immune response to soil-borne pathogens. However, the fine-tuned regulation and the transcriptomic plasticity of rootstocks in response to mycorrhization are still unknown. We compared the responses of 10 different grapevine rootstocks to arbuscular mycorrhizal symbiosis (AMS) formed with Rhizophagus irregularis DAOM197198 using RNA sequencing-based transcriptome profiling. We have highlighted a few shared regulation mechanisms, but also specific rootstock responses to R. irregularis colonization. A set of 353 genes was regulated by AMS in all ten rootstocks. We also compared the expression level of this set of genes to more than 2000 transcriptome profiles from various grapevine varieties and tissues to identify a class of transcripts related to mycorrhizal associations in these 10 rootstocks. Then, we compared the response of the 351 genes upregulated by mycorrhiza in grapevine to their Medicago truncatula homologs in response to mycorrhizal colonization based on available transcriptomic studies. More than 97% of the 351 M. truncatula-homologous grapevine genes were expressed in at least one mycorrhizal transcriptomic study, and 64% in every single RNAseq dataset. At the intra-specific level, we described, for the first time, shared and specific grapevine rootstock genes in response to R. irregularis symbiosis. At the inter-specific level, we defined a shared subset of mycorrhiza-responsive genes.
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Affiliation(s)
- Antoine Sportes
- Agroécologie, INRAE, Institut Agro, Univ. Bourgogne, Univ. Bourgogne Franche-Comté, Dijon, France
| | - Mathilde Hériché
- Agroécologie, INRAE, Institut Agro, Univ. Bourgogne, Univ. Bourgogne Franche-Comté, Dijon, France
| | - Arnaud Mounier
- Agroécologie, INRAE, Institut Agro, Univ. Bourgogne, Univ. Bourgogne Franche-Comté, Dijon, France
| | - Célien Durney
- Agroécologie, INRAE, Institut Agro, Univ. Bourgogne, Univ. Bourgogne Franche-Comté, Dijon, France
| | - Diederik van Tuinen
- Agroécologie, INRAE, Institut Agro, Univ. Bourgogne, Univ. Bourgogne Franche-Comté, Dijon, France
| | - Sophie Trouvelot
- Agroécologie, INRAE, Institut Agro, Univ. Bourgogne, Univ. Bourgogne Franche-Comté, Dijon, France
| | - Daniel Wipf
- Agroécologie, INRAE, Institut Agro, Univ. Bourgogne, Univ. Bourgogne Franche-Comté, Dijon, France
| | - Pierre Emmanuel Courty
- Agroécologie, INRAE, Institut Agro, Univ. Bourgogne, Univ. Bourgogne Franche-Comté, Dijon, France.
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Hernández-Martínez A, Lozano-Puentes HS, Camacho-Montealegre CM, Costa GM, Díaz-Ariza LA. Establishing the Relationship Between Flavonoid Content, Mycorrhization, and Soil Nutritional Content in Different Species of the Genus Passiflora in Colombia. ACS OMEGA 2023; 8:40647-40656. [PMID: 37929148 PMCID: PMC10620891 DOI: 10.1021/acsomega.3c05606] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 07/31/2023] [Accepted: 10/02/2023] [Indexed: 11/07/2023]
Abstract
The genus Passiflora comprises more than 500 species distributed in tropical and semitropical regions. With a great diversity of species, it is estimated that one-third is found in Colombian territory. Besides the food importance, Passiflora species are important sources of biologically active compounds, such as flavonoids. The most important symbiosis between soil fungi and vascular plants related to plant nutrition and tolerance to stress conditions is mycorrhizae. Passiflora species form arbuscular mycorrhizae, with several species of Glomeromycota. This association has been reported to alter the production of secondary metabolites. Thus, the objective of this study was to determine the relation between flavonoid content, mycorrhization, and soil nutritional content of Passiflora alata, Passiflora quadrangularis, Passiflora maliformis, and Passiflora ligularis in Colombian crops. The extracts were prepared and analyzed using UPLC/PDA-MS, and total flavonoids were quantified with the method of AlCl3. Soil characteristics, including nutritional content and percentage of colonization by arbuscular mycorrhizal fungi, were also determined. All variables were analyzed using Spearman's correlation and principal component analysis. Chromatographic analysis of the extracts allowed us to visualize the different flavonoid compositions of each extract, identifying several C-glycosylflavonoids. In this paper, we report for the first time the presence of luteolin-8-C-rhamnosyl-4'-O-glucoside, apigenin-6-C-arabinosyl-7-O-glucoside, and orientin for P. maliformis. Statistical analysis showed a negative correlation between available phosphorus (ρ = -0.90, p = <0.05) and magnesium (Mg) saturation (ρ = -0.70, p = <0.05) on flavonoid content, whereas the calcium magnesium (Ca/Mg) ratio was positively correlated (ρ = 0.70, p = <0.01). There was a nonsignificant correlation between mycorrhization and flavonoid content (ρ = -0.70, p = >0.1). These results contribute to understanding the relationship between flavonoid-mycorrhization-soil nutritional content on Passiflora spp.
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Affiliation(s)
- Andrea
Ximena Hernández-Martínez
- Facultad
de Ciencias, Departamento de Química, Grupo de Investigación
Fitoquímica, Pontificia Universidad
Javeriana, Carrera 7 No 43-82, Bogotá D.C. 110-23, Colombia
| | - Hair S. Lozano-Puentes
- Facultad
de Ciencias, Departamento de Química, Grupo de Investigación
Fitoquímica, Pontificia Universidad
Javeriana, Carrera 7 No 43-82, Bogotá D.C. 110-23, Colombia
- Facultad
de Ciencias, Departamento de Biología, Grupo de Investigación
en Agricultura Biológica, Pontificia
Universidad Javeriana, Carrera 7 No 43-82, Bogotá D.C. 110-23, Colombia
| | - Celia Marcela Camacho-Montealegre
- Facultad
de Ciencias, Departamento de Biología, Grupo de Investigación
en Agricultura Biológica, Pontificia
Universidad Javeriana, Carrera 7 No 43-82, Bogotá D.C. 110-23, Colombia
| | - Geison M. Costa
- Facultad
de Ciencias, Departamento de Química, Grupo de Investigación
Fitoquímica, Pontificia Universidad
Javeriana, Carrera 7 No 43-82, Bogotá D.C. 110-23, Colombia
| | - Lucía A. Díaz-Ariza
- Facultad
de Ciencias, Departamento de Biología, Grupo de Investigación
en Agricultura Biológica, Pontificia
Universidad Javeriana, Carrera 7 No 43-82, Bogotá D.C. 110-23, Colombia
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Yurkov AP, Afonin AM, Kryukov AA, Gorbunova AO, Kudryashova TR, Kovalchuk AI, Gorenkova AI, Bogdanova EM, Kosulnikov YV, Laktionov YV, Kozhemyakov AP, Romanyuk DA, Zhukov VA, Puzanskiy RK, Mikhailova YV, Yemelyanov VV, Shishova MF. The Effects of Rhizophagus irregularis Inoculation on Transcriptome of Medicago lupulina Leaves at Early Vegetative and Flowering Stages of Plant Development. PLANTS (BASEL, SWITZERLAND) 2023; 12:3580. [PMID: 37896043 PMCID: PMC10610208 DOI: 10.3390/plants12203580] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/26/2023] [Revised: 10/02/2023] [Accepted: 10/13/2023] [Indexed: 10/29/2023]
Abstract
The study is aimed at revealing the effects of Rhizophagus irregularis inoculation on the transcriptome of Medicago lupulina leaves at the early (second leaf formation) and later (flowering) stages of plant development. A pot experiment was conducted under conditions of low phosphorus (P) level in the substrate. M. lupulina plants were characterized by high mycorrhizal growth response and mycorrhization parameters. Library sequencing was performed on the Illumina HiseqXTen platform. Significant changes in the expression of 4863 (padj < 0.01) genes from 34049 functionally annotated genes were shown by Massive Analysis of cDNA Ends (MACE-Seq). GO enrichment analysis using the Kolmogorov-Smirnov test was performed, and 244 functional GO groups were identified, including genes contributing to the development of effective AM symbiosis. The Mercator online tool was used to assign functional classes of differentially expressed genes (DEGs). The early stage was characterized by the presence of six functional classes that included only upregulated GO groups, such as genes of carbohydrate metabolism, cellular respiration, nutrient uptake, photosynthesis, protein biosynthesis, and solute transport. At the later stage (flowering), the number of stimulated GO groups was reduced to photosynthesis and protein biosynthesis. All DEGs of the GO:0016036 group were downregulated because AM plants had higher resistance to phosphate starvation. For the first time, the upregulation of genes encoding thioredoxin in AM plant leaves was shown. It was supposed to reduce ROS level and thus, consequently, enhance the mechanisms of antioxidant protection in M. lupulina plants under conditions of low phosphorus level. Taken together, the obtained results indicate genes that are the most important for the effective symbiosis with M. lupulina and might be engaged in other plant species.
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Affiliation(s)
- Andrey P. Yurkov
- Laboratory of Ecology of Symbiotic and Associative Rhizobacteria, All-Russia Research Institute for Agricultural Microbiology, Pushkin, St. Petersburg 196608, Russia; (A.M.A.); (A.A.K.); (A.O.G.); (T.R.K.); (A.I.K.); (A.I.G.); (E.M.B.); (Y.V.K.); (Y.V.L.); (A.P.K.)
| | - Alexey M. Afonin
- Laboratory of Ecology of Symbiotic and Associative Rhizobacteria, All-Russia Research Institute for Agricultural Microbiology, Pushkin, St. Petersburg 196608, Russia; (A.M.A.); (A.A.K.); (A.O.G.); (T.R.K.); (A.I.K.); (A.I.G.); (E.M.B.); (Y.V.K.); (Y.V.L.); (A.P.K.)
| | - Alexey A. Kryukov
- Laboratory of Ecology of Symbiotic and Associative Rhizobacteria, All-Russia Research Institute for Agricultural Microbiology, Pushkin, St. Petersburg 196608, Russia; (A.M.A.); (A.A.K.); (A.O.G.); (T.R.K.); (A.I.K.); (A.I.G.); (E.M.B.); (Y.V.K.); (Y.V.L.); (A.P.K.)
| | - Anastasia O. Gorbunova
- Laboratory of Ecology of Symbiotic and Associative Rhizobacteria, All-Russia Research Institute for Agricultural Microbiology, Pushkin, St. Petersburg 196608, Russia; (A.M.A.); (A.A.K.); (A.O.G.); (T.R.K.); (A.I.K.); (A.I.G.); (E.M.B.); (Y.V.K.); (Y.V.L.); (A.P.K.)
| | - Tatyana R. Kudryashova
- Laboratory of Ecology of Symbiotic and Associative Rhizobacteria, All-Russia Research Institute for Agricultural Microbiology, Pushkin, St. Petersburg 196608, Russia; (A.M.A.); (A.A.K.); (A.O.G.); (T.R.K.); (A.I.K.); (A.I.G.); (E.M.B.); (Y.V.K.); (Y.V.L.); (A.P.K.)
- Graduate School of Biotechnology and Food Science, Peter the Great St. Petersburg Polytechnic University, St. Petersburg 194064, Russia
| | - Anastasia I. Kovalchuk
- Laboratory of Ecology of Symbiotic and Associative Rhizobacteria, All-Russia Research Institute for Agricultural Microbiology, Pushkin, St. Petersburg 196608, Russia; (A.M.A.); (A.A.K.); (A.O.G.); (T.R.K.); (A.I.K.); (A.I.G.); (E.M.B.); (Y.V.K.); (Y.V.L.); (A.P.K.)
- Graduate School of Biotechnology and Food Science, Peter the Great St. Petersburg Polytechnic University, St. Petersburg 194064, Russia
| | - Anastasia I. Gorenkova
- Laboratory of Ecology of Symbiotic and Associative Rhizobacteria, All-Russia Research Institute for Agricultural Microbiology, Pushkin, St. Petersburg 196608, Russia; (A.M.A.); (A.A.K.); (A.O.G.); (T.R.K.); (A.I.K.); (A.I.G.); (E.M.B.); (Y.V.K.); (Y.V.L.); (A.P.K.)
- Faculty of Biology, St. Petersburg State University, St. Petersburg 199034, Russia; (R.K.P.); (V.V.Y.); (M.F.S.)
| | - Ekaterina M. Bogdanova
- Laboratory of Ecology of Symbiotic and Associative Rhizobacteria, All-Russia Research Institute for Agricultural Microbiology, Pushkin, St. Petersburg 196608, Russia; (A.M.A.); (A.A.K.); (A.O.G.); (T.R.K.); (A.I.K.); (A.I.G.); (E.M.B.); (Y.V.K.); (Y.V.L.); (A.P.K.)
- Faculty of Biology, St. Petersburg State University, St. Petersburg 199034, Russia; (R.K.P.); (V.V.Y.); (M.F.S.)
| | - Yuri V. Kosulnikov
- Laboratory of Ecology of Symbiotic and Associative Rhizobacteria, All-Russia Research Institute for Agricultural Microbiology, Pushkin, St. Petersburg 196608, Russia; (A.M.A.); (A.A.K.); (A.O.G.); (T.R.K.); (A.I.K.); (A.I.G.); (E.M.B.); (Y.V.K.); (Y.V.L.); (A.P.K.)
| | - Yuri V. Laktionov
- Laboratory of Ecology of Symbiotic and Associative Rhizobacteria, All-Russia Research Institute for Agricultural Microbiology, Pushkin, St. Petersburg 196608, Russia; (A.M.A.); (A.A.K.); (A.O.G.); (T.R.K.); (A.I.K.); (A.I.G.); (E.M.B.); (Y.V.K.); (Y.V.L.); (A.P.K.)
| | - Andrey P. Kozhemyakov
- Laboratory of Ecology of Symbiotic and Associative Rhizobacteria, All-Russia Research Institute for Agricultural Microbiology, Pushkin, St. Petersburg 196608, Russia; (A.M.A.); (A.A.K.); (A.O.G.); (T.R.K.); (A.I.K.); (A.I.G.); (E.M.B.); (Y.V.K.); (Y.V.L.); (A.P.K.)
| | - Daria A. Romanyuk
- Laboratory of Genetics of Plant-Microbe Interactions, All-Russia Research Institute for Agricultural Microbiology, Pushkin, St. Petersburg 196608, Russia; (D.A.R.); (V.A.Z.)
| | - Vladimir A. Zhukov
- Laboratory of Genetics of Plant-Microbe Interactions, All-Russia Research Institute for Agricultural Microbiology, Pushkin, St. Petersburg 196608, Russia; (D.A.R.); (V.A.Z.)
| | - Roman K. Puzanskiy
- Faculty of Biology, St. Petersburg State University, St. Petersburg 199034, Russia; (R.K.P.); (V.V.Y.); (M.F.S.)
- Laboratory of Analytical Phytochemistry, Komarov Botanical Institute of the Russian Academy of Sciences, St. Petersburg 197022, Russia
| | - Yulia V. Mikhailova
- Laboratory of Biosystematics and Cytology, Komarov Botanical Institute of the Russian Academy of Sciences, St. Petersburg 197022, Russia;
| | - Vladislav V. Yemelyanov
- Faculty of Biology, St. Petersburg State University, St. Petersburg 199034, Russia; (R.K.P.); (V.V.Y.); (M.F.S.)
| | - Maria F. Shishova
- Faculty of Biology, St. Petersburg State University, St. Petersburg 199034, Russia; (R.K.P.); (V.V.Y.); (M.F.S.)
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Ran Z, Chen X, Li R, Duan W, Zhang Y, Fang L, Guo L, Zhou J. Transcriptomics and metabolomics reveal the changes induced by arbuscular mycorrhizal fungi in Panax quinquefolius L. JOURNAL OF THE SCIENCE OF FOOD AND AGRICULTURE 2023; 103:4919-4933. [PMID: 36942522 DOI: 10.1002/jsfa.12563] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/07/2022] [Revised: 03/11/2023] [Accepted: 03/21/2023] [Indexed: 06/08/2023]
Abstract
BACKGROUND Panax quinquefolius L. is one of the most important foods and herbs because of its high nutritional value and medicinal potential. In our previous study we found that the ginsenoside content in P. quinquefolius was improved by arbuscular mycorrhizal fungi (AMFs). However, little research has been conducted on the molecular mechanisms in P. quinquefolius roots induced by AMFs colonization. To identify the metabolomic and transcriptomic mechanisms of P. quinquefolius induced by AMFs, non-mycorrhized (control) and mycorrhized (AMF) P. quinquefolius were used as experimental materials for comparative analysis of the transcriptome and metabolome. RESULTS Compared with the control, 182 metabolites and 545 genes were significantly changed at the metabolic and transcriptional levels in AMFs treatment. The metabolic pattern of AMFs was changed, and the contents of ginsenosides (Rb1, Rg2), threonine, and glutaric acid were significantly increased. There were significant differences in the expression of genes involved in plant hormone signal transduction, glutathione metabolism, and the plant-pathogen interaction pathway. In addition, several transcription factors from the NAC, WRKY, and basic helix-loop-helix families were identified in AMFs versus the control. Furthermore, the combined analysis of 'transcriptomics-metabolomics' analysis showed that 'Plant hormone signal transduction', 'Amino sugar and nucleotide sugar metabolism' and 'Glutathione metabolism' pathways were the important enriched pathways in response to AMFs colonization. CONCLUSION Overall, these results provide new insights into P. quinquefolius response to AMFs, which improve our understanding of the molecular mechanisms of P. quinquefolius induced by AMFs. © 2023 Society of Chemical Industry.
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Affiliation(s)
- Zhifang Ran
- School of Biological Science and Technology, University of Jinan, Jinan, People's Republic of China
- School of Pharmaceutical Sciences, Shandong University of Traditional Chinese Medicine, Jinan, People's Republic of China
| | - Xiaoli Chen
- School of Biological Science and Technology, University of Jinan, Jinan, People's Republic of China
| | - Rui Li
- School of Biological Science and Technology, University of Jinan, Jinan, People's Republic of China
- School of Pharmaceutical Sciences, Shandong University of Traditional Chinese Medicine, Jinan, People's Republic of China
| | - Wanying Duan
- School of Biological Science and Technology, University of Jinan, Jinan, People's Republic of China
| | - Yongqing Zhang
- School of Pharmaceutical Sciences, Shandong University of Traditional Chinese Medicine, Jinan, People's Republic of China
| | - Lei Fang
- School of Biological Science and Technology, University of Jinan, Jinan, People's Republic of China
| | - Lanping Guo
- State Key Laboratory of Dao-di Herbs, National Resource Center for Chinese Materia Medica, China Academy of Chinese Medical Sciences, Beijing, People's Republic of China
| | - Jie Zhou
- School of Biological Science and Technology, University of Jinan, Jinan, People's Republic of China
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Wang Z, Liu J, White JF, Li C. Epichloë bromicola from wild barley improves salt-tolerance of cultivated barley by altering physiological responses to salt stress. Front Microbiol 2022; 13:1044735. [PMID: 36504776 PMCID: PMC9730248 DOI: 10.3389/fmicb.2022.1044735] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/15/2022] [Accepted: 11/02/2022] [Indexed: 11/25/2022] Open
Abstract
Introduction Epichloë bromicola is a cultivable fungal endophyte that lives in symbiosis with wild barley (Hordeum brevisubulatum) to which it confers salt tolerance. This study tested the hypothesis that E. bromicola derived from wild barley has the potential to increase salt tolerance in cultivated barley under salt stress. Methods To test this hypothesis, the growth response, physiological parameters, and metabolic profiles of barley plants inoculated with E. bromicola (E+) and those not inoculated with E. bromicola (E-) were compared under salt stress. Results Compared with E- barley plants, E+ barley plants had significantly increased plant height, shoot biomass, total biomass, chlorophyll content, osmotic synthesis, and accumulation of stress adaptation metabolites. E. bromicola increased the salt stress tolerance of cultivated barley, and the positive effects correlated with different salt stress conditions. Discussion These results suggest that E. bromicola has promising potential for enhancing the salt tolerance of barley. New insights into the mechanisms underlying this barley-fungal endophyte association are provided, and interesting questions regarding the role of E. bromicola in fungus-enhanced tolerance to salt stress in this symbiosis are raised.
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Affiliation(s)
- Zhengfeng Wang
- Economic Crops and Malt Barley Research Institute, Gansu Academy of Agricultural Science, Lanzhou, China
| | - Jing Liu
- State Key Laboratory of Herbage Improvement and Grassland Agro-Ecosystems, Key Laboratory of Grassland Livestock Industry Innovation, Ministry of Agriculture and Rural Affairs, Engineering Research Center of Grassland Industry, Ministry of Education, Gansu Tech Innovation Center of Western China Grassland Industry, Centre for Grassland Microbiome, College of Pastoral Agriculture Science and Technology, Lanzhou University, Lanzhou, China
| | - James F. White
- Department of Plant Biology, Rutgers University, New Brunswick, NJ, United States
| | - Chunjie Li
- Grassland Research Center of National Forestry and Grassland Administration, Chinese Academy of Forestry Sciences, Beijing, China,*Correspondence: Chunjie Li
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Ganugi P, Pathan SI, Zhang L, Arfaioli P, Benedettelli S, Masoni A, Pietramellara G, Lucini L. The pivotal role of cultivar affinity to arbuscular mycorrhizal fungi in determining mycorrhizal responsiveness to water deficit. PHYTOCHEMISTRY 2022; 203:113381. [PMID: 36030905 DOI: 10.1016/j.phytochem.2022.113381] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/11/2022] [Revised: 08/10/2022] [Accepted: 08/14/2022] [Indexed: 06/15/2023]
Abstract
Arbuscular mycorrhizal fungi (AMF) have gained remarkable importance, having been proved to alleviate drought stress-induced damage in wheat due to their ability to ameliorate plant water use efficiency and antioxidant enzyme activity. However, despite the current relevance of the topic, the molecular and physiological processes at the base of this symbiosis never consider the single cultivar affinity to mycorrhization as an influencing factor for the metabolic response in the AMF-colonized plant. In the present study, the mycorrhizal affinity of two durum wheat species (T. turgidum subsp. durum (Desf.)) varieties, Iride and Ramirez, were investigated. Successively, an untargeted metabolomics approach has been used to study the fungal contribution to mitigating water deficit in both varieties. Iride and Ramirez exhibited a high and low level of mycorrhizal symbiosis, respectively; resulting in a more remarkable alteration of metabolic pathways in the most colonised variety under water deficit conditions. However, the analysis highlighted the contribution of AMF to mitigating water deficiency in both varieties, resulting in the up- and down-regulation of many amino acids, alkaloids, phenylpropanoids, lipids, and hormones.
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Affiliation(s)
- Paola Ganugi
- Department for Sustainable Food Process, Research Centre for Nutrigenomics and Proteomics, Università Cattolica del Sacro Cuore, Piacenza, Italy
| | - Shamina Imran Pathan
- Department of Agriculture, Food, Environment and Forestry, University of Florence, P.le delle Cascine 28, Firenze, 50144, Italy.
| | - Leilei Zhang
- Department for Sustainable Food Process, Research Centre for Nutrigenomics and Proteomics, Università Cattolica del Sacro Cuore, Piacenza, Italy
| | - Paola Arfaioli
- Department of Agriculture, Food, Environment and Forestry, University of Florence, P.le delle Cascine 28, Firenze, 50144, Italy
| | - Stefano Benedettelli
- Department of Agriculture, Food, Environment and Forestry, University of Florence, P.le delle Cascine 28, Firenze, 50144, Italy
| | - Alberto Masoni
- Department of Biology, University of Florence, Sesto Fiorentino, 50019, Italy
| | - Giacomo Pietramellara
- Department of Agriculture, Food, Environment and Forestry, University of Florence, P.le delle Cascine 28, Firenze, 50144, Italy
| | - Luigi Lucini
- Department for Sustainable Food Process, Research Centre for Nutrigenomics and Proteomics, Università Cattolica del Sacro Cuore, Piacenza, Italy
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7
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Ran Z, Ding W, Cao S, Fang L, Zhou J, Zhang Y. Arbuscular mycorrhizal fungi: Effects on secondary metabolite accumulation of traditional Chinese medicines. PLANT BIOLOGY (STUTTGART, GERMANY) 2022; 24:932-938. [PMID: 35733285 DOI: 10.1111/plb.13449] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/10/2021] [Accepted: 05/27/2021] [Indexed: 06/15/2023]
Abstract
Traditional Chinese medicine (TCM) has played a pivotal role in maintaining the health of people, and the intrinsic quality of TCM is directly related to the clinical efficacy. The medicinal ingredients of TCM are derived from the secondary metabolites of plant metabolism and are also the result of the coordination of various physiological activities in plants. Arbuscular mycorrhizal fungi (AMF) are among the most ubiquitous plant mutualists that enhance the growth and yield of plants by facilitating the uptake of nutrients and water. Symbiosis of AMF with higher plants promotes growth and helps in the accumulation of secondary metabolites. However, there is still no systematic analysis and summation of their roles in the application of TCM, biosynthesis and accumulation of active substances of herbs, as well as the mechanisms. AMF directly or indirectly affect the accumulation of secondary metabolites of TCM, which is the focus of this review. First, in this review, the effects of AMF symbiosis on the content of different secondary metabolites in TCM, such as phenolic acids, flavonoids, alkaloids and terpenoids, are summarized. Moreover, the mechanism of AMF regulating the synthesis of secondary metabolites was also considered, in combination with the establishment of mycorrhizal symbionts, response mechanisms of plant hormones, nutritional elements and expression of key enzyme their activities. Finally, combined with the current application prospects for AMF in TCM, future in-depth research is planned, thus providing a reference for improving the quality of TCM. In this manuscript, we review the research status of AMF in promoting the accumulation of secondary metabolites in TCM to provide new ideas and methods for improving the quality of TCM.
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Affiliation(s)
- Z Ran
- School of Pharmaceutical Sciences, Shandong University of Traditional Chinese Medicine, Jinan, China
- School of Biological Science and Technology, University of Jinan, Jinan, China
| | - W Ding
- School of Biological Science and Technology, University of Jinan, Jinan, China
| | - S Cao
- School of Pharmaceutical Sciences, Shandong University of Traditional Chinese Medicine, Jinan, China
| | - L Fang
- School of Biological Science and Technology, University of Jinan, Jinan, China
| | - J Zhou
- School of Biological Science and Technology, University of Jinan, Jinan, China
| | - Y Zhang
- School of Pharmaceutical Sciences, Shandong University of Traditional Chinese Medicine, Jinan, China
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Yilmaz A. Mixed consortium of microbial inoculants improves yield and essential oil profile of coriander. J Biosci Bioeng 2022; 134:462-470. [PMID: 36100518 DOI: 10.1016/j.jbiosc.2022.07.016] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/06/2022] [Revised: 07/19/2022] [Accepted: 07/28/2022] [Indexed: 11/28/2022]
Abstract
Coriander (Coriandrum sativum L.), one of the oldest spice plants globally, has wide usage, mainly owing to its essential oil content. This study investigated the effects of rhizobacteria, mycorrhizae, and their combination on the yield and essential oil profile of coriander. The treatments resulted in statistically higher yield properties and essential oil values than the control. The effects of the microorganism treatments on the yield characteristics were not statistically different. However, the treatments significantly affected the essential oil content and yield. While the arbuscular mycorrhizal fungi and combined application of the microorganisms were statistically equal, arbuscular mycorrhizal fungi had a higher value in essential oil content and yield by 0.75% and 11.8 L ha-1, respectively. The combined application resulted in higher values of linalool (9.47%) and γ-terpinene (6.75%), the components with the highest rate in the essential oil composition. The principal component analysis highlighted the importance of the combined application on the crucial components. In the light of the results, beneficial microorganism treatments were considered significant for yield and essential oil enhancement. Therefore, the wide use of these treatments will highly contribute to coriander cultivation.
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Affiliation(s)
- Abdurrahim Yilmaz
- Faculty of Agriculture, Department of Field Crops, Bolu Abant Izzet Baysal University, 14030 Bolu, Turkey.
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9
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The Role of Medicago lupulina Interaction with Rhizophagus irregularis in the Determination of Root Metabolome at Early Stages of AM Symbiosis. PLANTS 2022; 11:plants11182338. [PMID: 36145739 PMCID: PMC9501341 DOI: 10.3390/plants11182338] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 07/29/2022] [Revised: 08/25/2022] [Accepted: 09/03/2022] [Indexed: 11/30/2022]
Abstract
The nature of plant–fungi interaction at early stages of arbuscular mycorrhiza (AM) development is still a puzzling problem. To investigate the processes behind this interaction, we used the Medicago lupulina MlS-1 line that forms high-efficient AM symbiosis with Rhizophagus irregularis. AM fungus actively colonizes the root system of the host plant and contributes to the formation of effective AM as characterized by a high mycorrhizal growth response (MGR) in the host plant. The present study is aimed at distinguishing the alterations in the M. lupulina root metabolic profile as an indicative marker of effective symbiosis. We examined the root metabolome at the 14th and 24th day after sowing and inoculation (DAS) with low substrate phosphorus levels. A GS-MS analysis detected 316 metabolites. Results indicated that profiles of M. lupulina root metabolites differed from those in leaves previously detected. The roots contained fewer sugars and organic acids. Hence, compounds supporting the growth of mycorrhizal fungus (especially amino acids, specific lipids, and carbohydrates) accumulated, and their presence coincided with intensive development of AM structures. Mycorrhization determined the root metabolite profile to a greater extent than host plant development. The obtained data highlight the importance of active plant–fungi metabolic interaction at early stages of host plant development for the determination of symbiotic efficiency.
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10
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Amani Machiani M, Javanmard A, Habibi Machiani R, Sadeghpour A. Arbuscular mycorrhizal Fungi and Changes in Primary and Secondary Metabolites. PLANTS (BASEL, SWITZERLAND) 2022; 11:2183. [PMID: 36079565 PMCID: PMC9460575 DOI: 10.3390/plants11172183] [Citation(s) in RCA: 11] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/14/2022] [Revised: 08/12/2022] [Accepted: 08/12/2022] [Indexed: 05/27/2023]
Abstract
Medicinal and aromatic plants (MAPs) are able to synthesize a diverse group of secondary metabolites (SMs) such as terpenoids or terpenes, steroids, phenolics, and alkaloids with a broad range of therapeutic and pharmacological potentials. Extensive use of MAPs in various industries makes it important to re-evaluate their research, development, production, and use. In intensive agricultural systems, increasing plant productivity is highly dependent on the application of chemical inputs. Extreme use of chemical or synthetic fertilizers, especially higher doses of N fertilization, decrease the yield of bioactive compounds in MAPs. The plant-soil microbial interaction is an eco-friendly strategy to decrease the demand of chemical fertilizers. Arbuscular mycorrhizal fungi (AMF), belongs to phylum Glomeromycota, can form mutualistic symbiotic associations with more than 80% of plant species. The AMF-plant symbiotic association, in addition to increasing nutrient and water uptake, reprograms the metabolic pathways of plants and changes the concentration of primary and secondary metabolites of medicinal and aromatic plants. The major findings reported that inoculation of AMF with MAPs enhanced secondary metabolites directly by increasing nutrient and water uptake and also improving photosynthesis capacity or indirectly by stimulating SMs' biosynthetic pathways through changes in phytohormonal concentrations and production of signaling molecules. Overall, the AMF-MAPs symbiotic association can be used as new eco-friendly technologies in sustainable agricultural systems for improving the quantity and quality of MAPs.
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Affiliation(s)
- Mostafa Amani Machiani
- Department of Plant Production and Genetics, Faculty of Agriculture, University of Maragheh, P.O. Box 55136-553, Maragheh 83111-55181, Iran
| | - Abdollah Javanmard
- Department of Plant Production and Genetics, Faculty of Agriculture, University of Maragheh, P.O. Box 55136-553, Maragheh 83111-55181, Iran
| | - Reyhaneh Habibi Machiani
- Department of Plant Production and Genetics, Faculty of Agriculture, University of Maragheh, P.O. Box 55136-553, Maragheh 83111-55181, Iran
| | - Amir Sadeghpour
- Crop, Soil and Environment Program, School of Agricultural Sciences, Southern Illinois, University of Carbondale, College of Science, Carbondale, IL 62901, USA
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11
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van Dijk LJA, Regazzoni EDE, Albrectsen BR, Ehrlén J, Abdelfattah A, Stenlund H, Pawlowski K, Tack AJM. Single, but not dual, attack by a biotrophic pathogen and a sap-sucking insect affects the oak leaf metabolome. FRONTIERS IN PLANT SCIENCE 2022; 13:897186. [PMID: 35991442 PMCID: PMC9381920 DOI: 10.3389/fpls.2022.897186] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 03/15/2022] [Accepted: 06/29/2022] [Indexed: 06/15/2023]
Abstract
Plants interact with a multitude of microorganisms and insects, both below- and above ground, which might influence plant metabolism. Despite this, we lack knowledge of the impact of natural soil communities and multiple aboveground attackers on the metabolic responses of plants, and whether plant metabolic responses to single attack can predict responses to dual attack. We used untargeted metabolic fingerprinting (gas chromatography-mass spectrometry, GC-MS) on leaves of the pedunculate oak, Quercus robur, to assess the metabolic response to different soil microbiomes and aboveground single and dual attack by oak powdery mildew (Erysiphe alphitoides) and the common oak aphid (Tuberculatus annulatus). Distinct soil microbiomes were not associated with differences in the metabolic profile of oak seedling leaves. Single attacks by aphids or mildew had pronounced but different effects on the oak leaf metabolome, but we detected no difference between the metabolomes of healthy seedlings and seedlings attacked by both aphids and powdery mildew. Our findings show that aboveground attackers can have species-specific and non-additive effects on the leaf metabolome of oak. The lack of a metabolic signature detected by GC-MS upon dual attack might suggest the existence of a potential negative feedback, and highlights the importance of considering the impacts of multiple attackers to gain mechanistic insights into the ecology and evolution of species interactions and the structure of plant-associated communities, as well as for the development of sustainable strategies to control agricultural pests and diseases and plant breeding.
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Affiliation(s)
- Laura J. A. van Dijk
- Department of Ecology, Environment and Plant Sciences, Stockholm University, Stockholm, Sweden
| | - Emilia D. E. Regazzoni
- Department of Ecology, Environment and Plant Sciences, Stockholm University, Stockholm, Sweden
| | | | - Johan Ehrlén
- Department of Ecology, Environment and Plant Sciences, Stockholm University, Stockholm, Sweden
| | - Ahmed Abdelfattah
- Institute of Environmental Biotechnology, Graz University of Technology, Graz, Austria
| | - Hans Stenlund
- Department of Plant Physiology, Umeå Plant Science Centre, Umeå University, Umeå, Sweden
| | - Katharina Pawlowski
- Department of Ecology, Environment and Plant Sciences, Stockholm University, Stockholm, Sweden
| | - Ayco J. M. Tack
- Department of Ecology, Environment and Plant Sciences, Stockholm University, Stockholm, Sweden
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12
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Alvarez-Rivera G, Sanz A, Cifuentes A, Ibánez E, Paape T, Lucas MM, Pueyo JJ. Flavonoid Accumulation Varies in Medicago truncatula in Response to Mercury Stress. FRONTIERS IN PLANT SCIENCE 2022; 13:933209. [PMID: 35874019 PMCID: PMC9301243 DOI: 10.3389/fpls.2022.933209] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 04/30/2022] [Accepted: 06/21/2022] [Indexed: 06/15/2023]
Abstract
Mercury (Hg) contamination is increasing worldwide in both wild ecosystems and agricultural soils due to natural processes, but mostly to anthropic activities. The molecular mechanisms involved in Hg toxicity and tolerance in plants have been extensively studied; however, the role of flavonoids in response to Hg stress remains to be investigated. We conducted a metabolomic study to analyze the changes induced at the secondary metabolite level in three Hg-tolerant and one Hg-sensitive Medicago truncatula cultivars. A total of 46 flavonoid compounds, classified into five different flavonoid families: anthocyanidins, flavones, isoflavones, pterocarpan flavonoids, and flavanones, along with their respective glycoconjugate derivatives, were identified in leaf and root tissues. The synthesis of free isoflavones, followed by monoglycosylation and further malonylation was shown to be characteristic of root samples, whereas higher glycosylation, followed by further acylation with coumaric and ferulic acid was characteristic of leaf tissues. While minor changes were observed in leaves, significant quantitative changes could be observed in roots upon Hg treatment. Some flavonoids were strongly upregulated in roots, including malonylglucosides of biochanin A, formononetin and medicarpin, and aglycones biochanin, daidzein, and irisolidone. Hg tolerance appeared to be mainly associated to the accumulation of formononetin MalGlc, tricin GlcAGlcA, and afrormosin Glc II in leaves, whereas aglycone accumulation was associated with tolerance to Hg stress in roots. The results evidence the alteration of the flavonoid metabolic profile and their glycosylation processes in response to Hg stress. However, notable differences existed between varieties, both in the basal metabolic profile and in the response to treatment with Hg. Overall, we observed an increase in flavonoid production in response to Hg stress, and Hg tolerance appeared to be associated to a characteristic glycosylation pattern in roots, associated with the accumulation of aglycones and monoglycosylated flavonoids. The findings are discussed in the context of the flavonoid biosynthetic pathway to provide a better understanding of the role of these secondary metabolites in the response and tolerance to Hg stress in M. truncatula.
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Affiliation(s)
| | - Aurora Sanz
- Institute of Agricultural Sciences, ICA-CSIC, Madrid, Spain
| | - Alejandro Cifuentes
- Laboratory of Foodomics, CIAL-CSIC, Institute of Food Science Research, Madrid, Spain
| | - Elena Ibánez
- Laboratory of Foodomics, CIAL-CSIC, Institute of Food Science Research, Madrid, Spain
| | - Timothy Paape
- Brookhaven National Laboratory, Upton, NY, United States
| | | | - José J. Pueyo
- Institute of Agricultural Sciences, ICA-CSIC, Madrid, Spain
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13
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Tsiokanos E, Cartabia A, Tsafantakis N, Lalaymia I, Termentzi A, Miguel M, Declerck S, Fokialakis N. The Metabolic Profile of Anchusa officinalis L. Differs According to Its Associated Arbuscular Mycorrhizal Fungi. Metabolites 2022; 12:metabo12070573. [PMID: 35888697 PMCID: PMC9319164 DOI: 10.3390/metabo12070573] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/12/2022] [Revised: 06/10/2022] [Accepted: 06/15/2022] [Indexed: 02/05/2023] Open
Abstract
Anchusa officinalis (L.) interacts with various microorganisms including arbuscular mycorrhizal fungi (AMF). Recently, the AMF Rhizophagus irregularis MUCL 41833 has been shown to modulate the metabolome of A. officinalis. However, little information is available on the impact that different AMF species may have on primary and secondary plant metabolites. In this study, four AMF species belonging to the genus Rhizophagus (R. irregularis MUCL 41833, R. intraradices MUCL 49410, R. clarus MUCL 46238, R. aggregatus MUCL 49408), were evaluated for their potential to modulate A. officinalis metabolome under controlled semi-hydroponic cultivation conditions. An untargeted metabolomic analysis was performed using UHPLC-HRMS followed by a multivariate data analysis. Forty-two compounds were reported to be highly modulated in relation to the different AMF associations. Among them, six new secondary metabolites were tentatively identified including two acetyl- and four malonyl- phenylpropanoid and saponin derivatives, all presenting a common substitution at position C-6 of the glycosidic moiety. In addition, an enhanced accumulation of primary and secondary metabolites was observed for R. irregularis and R. intraradices, showing a stronger effect on A. officinalis metabolome compared to R. clarus and R. aggregatus. Therefore, our data suggest that different AMF species may specifically modulate A. officinalis metabolite production.
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Affiliation(s)
- Evangelia Tsiokanos
- Department of Pharmacy, Division of Pharmacognosy and Natural Product Chemistry, National and Kapodistrian University of Athens, 15771 Athens, Greece; (E.T.); (N.T.)
| | - Annalisa Cartabia
- Applied Microbiology, Mycology, Earth and Life Institute, Université Catholique de Louvain-la-Neuve, 1348 Louvain-la-Neuve, Belgium; (A.C.); (I.L.); (S.D.)
| | - Nikolaos Tsafantakis
- Department of Pharmacy, Division of Pharmacognosy and Natural Product Chemistry, National and Kapodistrian University of Athens, 15771 Athens, Greece; (E.T.); (N.T.)
| | - Ismahen Lalaymia
- Applied Microbiology, Mycology, Earth and Life Institute, Université Catholique de Louvain-la-Neuve, 1348 Louvain-la-Neuve, Belgium; (A.C.); (I.L.); (S.D.)
| | - Aikaterini Termentzi
- Laboratory of Pesticides’ Toxicolology, Benaki Phytopathological Institute, 8 St. Delta Street Kifissia, 14561 Athens, Greece;
| | - Maria Miguel
- Instituto de Tecnologia Química e Biológica António Xavier, Universidade Nova de Lisboa (ITQB NOVA), Av. da República, 2780-157 Oeiras, Portugal;
| | - Stéphane Declerck
- Applied Microbiology, Mycology, Earth and Life Institute, Université Catholique de Louvain-la-Neuve, 1348 Louvain-la-Neuve, Belgium; (A.C.); (I.L.); (S.D.)
| | - Nikolas Fokialakis
- Department of Pharmacy, Division of Pharmacognosy and Natural Product Chemistry, National and Kapodistrian University of Athens, 15771 Athens, Greece; (E.T.); (N.T.)
- Correspondence: ; Tel.: +30-2107274524
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14
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Brands M, Dörmann P. Two AMP-Binding Domain Proteins from Rhizophagus irregularis Involved in Import of Exogenous Fatty Acids. MOLECULAR PLANT-MICROBE INTERACTIONS : MPMI 2022; 35:464-476. [PMID: 35285673 DOI: 10.1094/mpmi-01-22-0026-r] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/14/2023]
Abstract
Arbuscular mycorrhizal fungi (AMF) colonize roots, where they provide nutrients in exchange for sugars and lipids. Because AMF lack genes for cytosolic fatty acid de novo synthase (FAS), they depend on host-derived fatty acids. AMF colonization is accompanied by expression of specific lipid genes and synthesis of sn-2 monoacylglycerols (MAGs). It is unknown how host-derived fatty acids are taken up by AMF. We describe the characterization of two AMP-binding domain protein genes from Rhizophagus irregularis, RiFAT1 and RiFAT2, with sequence similarity to Saccharomyces cerevisiae fatty acid transporter 1 (FAT1). Uptake of 13C-myristic acid (14:0) and, to a lesser extent, 13C-palmitic acid (16:0) was enhanced after expression of RiFAT1 or RiFAT2 in S. cerevisiae Δfat1 cells. The uptake of 2H-labeled fatty acids from 2H-myristoylglycerol or 2H-palmitoylglycerol was also increased after RiFAT1 and RiFAT2 expression in Δfat, but intact 2H-MAGs were not detected. RiFAT1 and RiFAT2 expression was induced in colonized roots compared with extraradical mycelium. 13C-label in the AMF-specific palmitvaccenic acid (16:1Δ11) and eicosatrienoic acid (20:3) were detected in colonized roots only when 13C2-acetate was supplemented but not 13C-fatty acids, demonstrating that de novo synthesized, host-derived fatty acids are rapidly taken up by R. irregularis from the roots. The results show that RiFAT1 and RiFAT2 are involved in the uptake of myristic acid (14:0) and palmitic acid (16:0), while fatty acids from MAGs are only taken up after hydrolysis. Therefore, the two proteins might be involved in fatty acid import into the fungal arbuscules in colonized roots.[Formula: see text] Copyright © 2022 The Author(s). This is an open access article distributed under the CC BY-NC-ND 4.0 International license.
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Affiliation(s)
- Mathias Brands
- University of Bonn, Institute of Molecular Physiology and Biotechnology of Plants (IMBIO), Karlrobert-Kreiten-Straße 13, 53115 Bonn, Germany
- University of Cologne, Botanical Institute, Cologne Biocenter, Zülpicher Straße 47b, 50674 Cologne, Germany
| | - Peter Dörmann
- University of Bonn, Institute of Molecular Physiology and Biotechnology of Plants (IMBIO), Karlrobert-Kreiten-Straße 13, 53115 Bonn, Germany
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Corrales-Sánchez JB, López-Meyer M, Valdez Morales M, Trejo Aguilar D, Bojórquez Armenta YDJ, Valle Castillo CE, Ibarra Sarmiento CR, Romero Urías CDLÁ, Mora Romero GA. ARBUSCULAR MYCORRHIZA SYMBIOSIS REDUCES THE RHIZOCTONIA ROOT ROT AND ALTERS THE PHENOLIC PROFILE IN COMMON BEAN. ACTA BIOLÓGICA COLOMBIANA 2022. [DOI: 10.15446/abc.v27n3.87627] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022] Open
Abstract
Arbuscular mycorrhizal fungi (AMF) have the potential to reduce the deleterious effect of soil-borne pathogens, but their ability for pathogen biocontrol may vary depending on the genotype of the plant, the pathogen, and the AMF interaction. Thus, the aim of this work was to evaluate the effect of the Mexican biofertilizer Rizofermic-UV based on a mix of AMF formulation against the common bean root rot caused by the pathogenic fungus Rhizoctonia solani Kühn 1858 (Teleomorph: Thanatephorus cucumeris). Additionally, the total phenolic content, individual phenolic acid (caffeic, ferulic, o-cumaric, p-cumaric, sinapic, and vanillic), and the flavonoid (catechin, kaempferol, quercetin and, rutin) profiles were analyzed. Our results show that the AMF biofertilization reduces the disease severity up to 68 %, and this was accompanied by a boost in total phenolic content in dual inoculation. Furthermore, a variation in the individual phenolic profiles caused by both AMF interaction and pathogen treatment alone were observed. In dual inoculations, vanillic acid was significantly different among treatments, suggesting it may contribute to the enhanced resistance of mycorrhizal roots to soil-borne pathogens. Further work is required to elucidate the exact role of these compounds in the bioprotection of arbuscular mycorrhizal to plant pathogens.
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16
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Mycorrhiza-Induced Alterations in Metabolome of Medicago lupulina Leaves during Symbiosis Development. PLANTS 2021; 10:plants10112506. [PMID: 34834870 PMCID: PMC8617643 DOI: 10.3390/plants10112506] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 09/16/2021] [Revised: 10/12/2021] [Accepted: 10/22/2021] [Indexed: 01/12/2023]
Abstract
The present study is aimed at disclosing metabolic profile alterations in the leaves of the Medicago lupulina MlS-1 line that result from high-efficiency arbuscular mycorrhiza (AM) symbiosis formed with Rhizophagus irregularis under condition of a low phosphorus level in the substrate. A highly effective AM symbiosis was established in the period from the stooling to the shoot branching initiation stage (the efficiency in stem height exceeded 200%). Mycorrhization led to a more intensive accumulation of phosphates (glycerophosphoglycerol and inorganic phosphate) in M. lupulina leaves. Metabolic spectra were detected with GS-MS analysis. The application of complex mathematical analyses made it possible to identify the clustering of various groups of 320 metabolites and thus demonstrate the central importance of the carbohydrate and carboxylate-amino acid clusters. The results obtained indicate a delay in the metabolic development of mycorrhized plants. Thus, AM not only accelerates the transition between plant developmental stages but delays biochemical “maturation” mainly in the form of a lag of sugar accumulation in comparison with non-mycorrhized plants. Several methods of statistical modeling proved that, at least with respect to determining the metabolic status of host-plant leaves, stages of phenological development have priority over calendar age.
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17
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Cartabia A, Tsiokanos E, Tsafantakis N, Lalaymia I, Termentzi A, Miguel M, Fokialakis N, Declerck S. The Arbuscular Mycorrhizal Fungus Rhizophagus irregularis MUCL 41833 Modulates Metabolites Production of Anchusa officinalis L. Under Semi-Hydroponic Cultivation. FRONTIERS IN PLANT SCIENCE 2021; 12:724352. [PMID: 34539717 PMCID: PMC8443025 DOI: 10.3389/fpls.2021.724352] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/12/2021] [Accepted: 07/27/2021] [Indexed: 06/01/2023]
Abstract
Anchusa officinalis is recognized for its therapeutic properties, which are attributed to the production of different metabolites. This plant interacts with various microorganisms, including the root symbiotic arbuscular mycorrhizal fungi (AMF). Whether these fungi play a role in the metabolism of A. officinalis is unknown. In the present study, two independent experiments, associating A. officinalis with the AMF Rhizophagus irregularis MUCL 41833, were conducted in a semi-hydroponic (S-H) cultivation system. The experiments were intended to investigate the primary and secondary metabolites (PMs and SMs, respectively) content of shoots, roots, and exudates of mycorrhized (M) and non-mycorrhized (NM) plants grown 9 (Exp. 1) or 30 (Exp. 2) days in the S-H cultivation system. Differences in the PMs and SMs were evaluated by an untargeted ultrahigh-performance liquid chromatography high-resolution mass spectrometry metabolomics approach combined with multivariate data analysis. Differences in metabolite production were shown in Exp. 1. Volcano-plots analysis revealed a strong upregulation of 10 PMs and 23 SMs. Conversely, in Exp. 2, no significant differences in PMs and SMs were found in shoots or roots between M and NM plants whereas the coumarin scoparone and the furanocoumarin byakangelicin, accumulated in the exudates of the M plants. In Exp. 1, we noticed an enhanced production of PMs, including organic acids and amino acids, with the potential to act as precursors of other amino acids and as building blocks for the production of macromolecules. Similarly, SMs production was significantly affected in Exp 1. In particular, the phenolic compounds derived from the phenylpropanoid pathway. Fifteen di-, tri-, and tetra-meric C6-C3 derivatives of caffeic acid were induced mainly in the roots of M plants, while four oleanane-types saponins were accumulated in the shoots of M plants. Two new salvianolic acid B derivatives and one new rosmarinic acid derivative, all presenting a common substitution pattern (methylation at C-9"' and C-9' and hydroxylation at C-8), were detected in the roots of M plants. The accumulation of diverse compounds observed in colonized plants suggested that AMF have the potential to affect specific plant biosynthetic pathways.
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Affiliation(s)
- Annalisa Cartabia
- Applied Microbiology, Mycology, Earth and Life Institute, Université catholique de Louvain, Louvain-la-Neuve, Belgium
| | - Evangelia Tsiokanos
- Department of Pharmacognosy and Natural Product Chemistry, Faculty of Pharmacy, National and Kapodistrian University of Athens, Athens, Greece
| | - Nikolaos Tsafantakis
- Department of Pharmacognosy and Natural Product Chemistry, Faculty of Pharmacy, National and Kapodistrian University of Athens, Athens, Greece
| | - Ismahen Lalaymia
- Applied Microbiology, Mycology, Earth and Life Institute, Université catholique de Louvain, Louvain-la-Neuve, Belgium
| | - Aikaterini Termentzi
- Laboratory of Pesticides' Toxicology, Department of Pesticides Control and Phytopharmacy, Benaki Phytopathological Institute, Athens, Greece
| | - Maria Miguel
- Instituto de Tecnologia Química e Biológica António Xavier, Universidade Nova de Lisboa (ITQB NOVA), Oeiras, Portugal
| | - Nikolas Fokialakis
- Department of Pharmacognosy and Natural Product Chemistry, Faculty of Pharmacy, National and Kapodistrian University of Athens, Athens, Greece
| | - Stéphane Declerck
- Applied Microbiology, Mycology, Earth and Life Institute, Université catholique de Louvain, Louvain-la-Neuve, Belgium
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Rivero J, Lidoy J, Llopis-Giménez Á, Herrero S, Flors V, Pozo MJ. Mycorrhizal symbiosis primes the accumulation of antiherbivore compounds and enhances herbivore mortality in tomato. JOURNAL OF EXPERIMENTAL BOTANY 2021; 72:5038-5050. [PMID: 33884424 PMCID: PMC8219033 DOI: 10.1093/jxb/erab171] [Citation(s) in RCA: 29] [Impact Index Per Article: 9.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/19/2020] [Accepted: 04/19/2021] [Indexed: 05/06/2023]
Abstract
Plant association with arbuscular mycorrhizal fungi (AMF) can increase their ability to overcome multiple stresses, but their impact on plant interactions with herbivorous insects is controversial. Here we show higher mortality of the leaf-chewer Spodoptera exigua when fed on tomato plants colonized by the AMF Funneliformis mosseae, evidencing mycorrhiza-induced resistance. In search of the underlying mechanisms, an untargeted metabolomic analysis through ultra-performance liquid chromatography tandem mass spectrometry (UPLC-MS) was performed. The results showed that mycorrhizal symbiosis had a very limited impact on the leaf metabolome in the absence of stress, but significantly modulated the response to herbivory in the damaged area. A cluster of over accumulated metabolites was identified in those leaflets damaged by S. exigua feeding in mycorrhizal plants, while unwounded distal leaflets responded similar to those from non-mycorrhizal plants. These primed-compounds were mostly related to alkaloids, fatty acid derivatives and phenylpropanoid-polyamine conjugates. The deleterious effect on larval survival of some of these compounds, including the alkaloid physostigmine, the fatty acid derivatives 4-oxododecanedioic acid and azelaic acid, was confirmed. Thus, our results evidence the impact of AMF on metabolic reprograming upon herbivory that leads to a primed accumulation of defensive compounds.
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Affiliation(s)
- Javier Rivero
- Department of Soil Microbiology and Symbiotic Systems, Estación Experimental del Zaidín, Consejo Superior de Investigaciones Científicas (CSIC), Granada, Spain
| | - Javier Lidoy
- Department of Soil Microbiology and Symbiotic Systems, Estación Experimental del Zaidín, Consejo Superior de Investigaciones Científicas (CSIC), Granada, Spain
| | - Ángel Llopis-Giménez
- Department of Genetics and Institut Universitari en Biotecnologia i Biomedicina (BIOTECMED), Universitat de València, Burjassot, Spain
| | - Salvador Herrero
- Department of Genetics and Institut Universitari en Biotecnologia i Biomedicina (BIOTECMED), Universitat de València, Burjassot, Spain
| | - Víctor Flors
- Metabolic Integration and Cell Signaling Laboratory, Plant Physiology Section, Unidad Asociada al Consejo Superior de Investigaciones Científicas (EEZ-CSIC)-Department of Ciencias Agrarias y del Medio Natural, Universitat Jaume I, Castellón, Spain
| | - María J Pozo
- Department of Soil Microbiology and Symbiotic Systems, Estación Experimental del Zaidín, Consejo Superior de Investigaciones Científicas (CSIC), Granada, Spain
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Shtark O, Puzanskiy R, Avdeeva G, Yemelyanov V, Shavarda A, Romanyuk D, Kliukova M, Kirpichnikova A, Tikhonovich I, Zhukov V, Shishova M. Metabolic Alterations in Pisum sativum Roots during Plant Growth and Arbuscular Mycorrhiza Development. PLANTS 2021; 10:plants10061033. [PMID: 34063836 PMCID: PMC8224052 DOI: 10.3390/plants10061033] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 04/01/2021] [Revised: 05/17/2021] [Accepted: 05/18/2021] [Indexed: 01/04/2023]
Abstract
Intensive exchange of nutrients is a crucial part of the complex interaction between a host plant and fungi within arbuscular mycorrhizal (AM) symbiosis. For the first time, the present study demonstrates how inoculation with AMF Rhizophagus irregularis affects the pea (Pisum sativum L.) root metabolism at key stages of plant development. These correspond to days 21 (vegetation), 42 (flowering initiation), and 56 (fruiting-green pod). Metabolome profiling was carried out by means of a state-of-the-art GC-MS technique. The content shifts revealed include lipophilic compounds, sugars, carboxylates, and amino acids. The metabolic alterations were principally dependent on the stage of plant development but were also affected by the development of AM fungi, a fact which highlights interaction between symbiotic partners. The comparison of the present data with the results of leaf metabolome profiling earlier obtained did not reveal common signatures of metabolic response to mycorrhization in leaves and roots. We supposed that the feedback for the development and symbiotic interaction on the part of the supraorganismic system (root + AM fungi) was the cause of the difference between the metabolic profile shift in leaf and root cells that our examination revealed. New investigations are required to expand our knowledge of metabolome plasticity of the whole organism and/or system of organisms, and such results might be put to use for the intensification of sustainable agriculture.
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Affiliation(s)
- Oksana Shtark
- Department of Biotechnology, All-Russia Research Institute for Agricultural Microbiology, Pushkin, 196608 St. Petersburg, Russia; (D.R.); (M.K.); (I.T.); (V.Z.)
- Correspondence: (O.S.); (M.S.); Tel.: +7-812-470-5183 (O.S.); +7-812-328-9695 (M.S.)
| | - Roman Puzanskiy
- Laboratory of Analytical Phytochemistry, Komarov Botanical Institute of the Russian Academy of Sciences, 193022 St. Petersburg, Russia; (R.P.); (A.S.)
- Faculty of Biology, St. Petersburg State University, 199034 St. Petersburg, Russia; (G.A.); (V.Y.); (A.K.)
| | - Galina Avdeeva
- Faculty of Biology, St. Petersburg State University, 199034 St. Petersburg, Russia; (G.A.); (V.Y.); (A.K.)
| | - Vladislav Yemelyanov
- Faculty of Biology, St. Petersburg State University, 199034 St. Petersburg, Russia; (G.A.); (V.Y.); (A.K.)
| | - Alexey Shavarda
- Laboratory of Analytical Phytochemistry, Komarov Botanical Institute of the Russian Academy of Sciences, 193022 St. Petersburg, Russia; (R.P.); (A.S.)
- Center for Molecular and Cell Technologies, St. Petersburg State University, 199034 St. Petersburg, Russia
| | - Daria Romanyuk
- Department of Biotechnology, All-Russia Research Institute for Agricultural Microbiology, Pushkin, 196608 St. Petersburg, Russia; (D.R.); (M.K.); (I.T.); (V.Z.)
| | - Marina Kliukova
- Department of Biotechnology, All-Russia Research Institute for Agricultural Microbiology, Pushkin, 196608 St. Petersburg, Russia; (D.R.); (M.K.); (I.T.); (V.Z.)
| | - Anastasia Kirpichnikova
- Faculty of Biology, St. Petersburg State University, 199034 St. Petersburg, Russia; (G.A.); (V.Y.); (A.K.)
| | - Igor Tikhonovich
- Department of Biotechnology, All-Russia Research Institute for Agricultural Microbiology, Pushkin, 196608 St. Petersburg, Russia; (D.R.); (M.K.); (I.T.); (V.Z.)
- Faculty of Biology, St. Petersburg State University, 199034 St. Petersburg, Russia; (G.A.); (V.Y.); (A.K.)
| | - Vladimir Zhukov
- Department of Biotechnology, All-Russia Research Institute for Agricultural Microbiology, Pushkin, 196608 St. Petersburg, Russia; (D.R.); (M.K.); (I.T.); (V.Z.)
| | - Maria Shishova
- Faculty of Biology, St. Petersburg State University, 199034 St. Petersburg, Russia; (G.A.); (V.Y.); (A.K.)
- Correspondence: (O.S.); (M.S.); Tel.: +7-812-470-5183 (O.S.); +7-812-328-9695 (M.S.)
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20
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Piovesana S, Aita SE, Cannazza G, Capriotti AL, Cavaliere C, Cerrato A, Guarnaccia P, Montone CM, Laganà A. In-depth cannabis fatty acid profiling by ultra-high performance liquid chromatography coupled to high resolution mass spectrometry. Talanta 2021; 228:122249. [PMID: 33773747 DOI: 10.1016/j.talanta.2021.122249] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/19/2021] [Revised: 02/19/2021] [Accepted: 02/22/2021] [Indexed: 10/22/2022]
Abstract
Industrial hemp (Cannabis sativa L.) represents an important plant, used for a variety of uses including pharmaceutical and nutraceutical purposes. As such, a detailed characterization of the composition of this plant could help future research to further exploit the beneficial effects of hemp compounds on the human health. Among the many compounds of hemp, fatty acids represent an interesting class of minor components, which has been overlooked so far. In this work, an untargeted approach based on liquid-chromatography coupled to a high-resolution mass spectrometry and a dedicated structure-based workflow for raw data interpretation was employed for the characterization of fatty acids from hemp inflorescences. A simple method, without any chemical derivatization, was developed for extraction and characterization of fatty acids leading to the tentative identification of 39 fatty acid species in the five hemp samples. A quantitative analysis on the untargeted data was initially performed, using peak areas as surrogate of analyte abundance for relative quantitation. Five fatty acids resulted the most abundant in all hemp samples, with ca. 90% of the total peak area. For these compounds a targeted quantitative method was validated, indicating that the most abundant ones were linolenic acid (1.39-7.95 mg g-1) and linoleic acid (1.04-7.87 mg g-1), followed by palmitic acid (3.74-6.08 mg g-1), oleic acid (0.91-4.73 mg g-1) and stearic acid (0.64-2.25 mg g-1).
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Affiliation(s)
- Susy Piovesana
- Department of Chemistry, Sapienza University of Rome, Piazzale Aldo Moro 5, 00185, Rome, Italy
| | - Sara Elsa Aita
- Department of Chemistry, Sapienza University of Rome, Piazzale Aldo Moro 5, 00185, Rome, Italy
| | - Giuseppe Cannazza
- Department of Life Sciences, University of Modena and Reggio Emilia, Via Giuseppe Campi 287, 41125, Modena, Italy; CNR NANOTEC, Campus Ecotekne, University of Salento, Via Monteroni, 73100, Lecce, Italy
| | - Anna Laura Capriotti
- Department of Chemistry, Sapienza University of Rome, Piazzale Aldo Moro 5, 00185, Rome, Italy.
| | - Chiara Cavaliere
- Department of Chemistry, Sapienza University of Rome, Piazzale Aldo Moro 5, 00185, Rome, Italy
| | - Andrea Cerrato
- Department of Chemistry, Sapienza University of Rome, Piazzale Aldo Moro 5, 00185, Rome, Italy
| | - Paolo Guarnaccia
- Dipartimento di Agricoltura, Alimentazione e Ambiente, University of Catania, 95123, Catania CT, Italy
| | - Carmela Maria Montone
- Department of Chemistry, Sapienza University of Rome, Piazzale Aldo Moro 5, 00185, Rome, Italy
| | - Aldo Laganà
- Department of Chemistry, Sapienza University of Rome, Piazzale Aldo Moro 5, 00185, Rome, Italy; CNR NANOTEC, Campus Ecotekne, University of Salento, Via Monteroni, 73100, Lecce, Italy
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21
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Vandana UK, Rajkumari J, Singha LP, Satish L, Alavilli H, Sudheer PD, Chauhan S, Ratnala R, Satturu V, Mazumder PB, Pandey P. The Endophytic Microbiome as a Hotspot of Synergistic Interactions, with Prospects of Plant Growth Promotion. BIOLOGY 2021; 10:101. [PMID: 33535706 PMCID: PMC7912845 DOI: 10.3390/biology10020101] [Citation(s) in RCA: 36] [Impact Index Per Article: 12.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 12/20/2020] [Revised: 01/28/2021] [Accepted: 01/29/2021] [Indexed: 12/16/2022]
Abstract
The plant root is the primary site of interaction between plants and associated microorganisms and constitutes the main components of plant microbiomes that impact crop production. The endophytic bacteria in the root zone have an important role in plant growth promotion. Diverse microbial communities inhabit plant root tissues, and they directly or indirectly promote plant growth by inhibiting the growth of plant pathogens, producing various secondary metabolites. Mechanisms of plant growth promotion and response of root endophytic microorganisms for their survival and colonization in the host plants are the result of complex plant-microbe interactions. Endophytic microorganisms also assist the host to sustain different biotic and abiotic stresses. Better insights are emerging for the endophyte, such as host plant interactions due to advancements in 'omic' technologies, which facilitate the exploration of genes that are responsible for plant tissue colonization. Consequently, this is informative to envisage putative functions and metabolic processes crucial for endophytic adaptations. Detection of cell signaling molecules between host plants and identification of compounds synthesized by root endophytes are effective means for their utilization in the agriculture sector as biofertilizers. In addition, it is interesting that the endophytic microorganism colonization impacts the relative abundance of indigenous microbial communities and suppresses the deleterious microorganisms in plant tissues. Natural products released by endophytes act as biocontrol agents and inhibit pathogen growth. The symbiosis of endophytic bacteria and arbuscular mycorrhizal fungi (AMF) affects plant symbiotic signaling pathways and root colonization patterns and phytohormone synthesis. In this review, the potential of the root endophytic community, colonization, and role in the improvement of plant growth has been explained in the light of intricate plant-microbe interactions.
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Affiliation(s)
- Udaya Kumar Vandana
- Department of Biotechnology, Assam University Silchar, Assam 788011, India; (U.K.V.); (P.B.M.)
| | - Jina Rajkumari
- Department of Microbiology, Assam University Silchar, Assam 788011, India; (J.R.); (L.P.S.)
| | - L. Paikhomba Singha
- Department of Microbiology, Assam University Silchar, Assam 788011, India; (J.R.); (L.P.S.)
| | - Lakkakula Satish
- Avram and Stella Goldstein-Goren Department of Biotechnology Engineering and the Ilse Katz Center for Meso and Nanoscale Science and Technology, Ben-Gurion University of the Negev, Beer Sheva 84105, Israel;
- The Albert Katz International School for Desert Studies, The Jacob Blaustein Institutes for Desert Research, Ben-Gurion University of the Negev, Beer Sheva 84105, Israel
| | - Hemasundar Alavilli
- Department of Biochemistry and Molecular Biology, College of Medicine, Korea Molecular Medicine and Nutrition Research Institute, Korea University, Seoul 02841, Korea;
| | - Pamidimarri D.V.N. Sudheer
- Amity Institute of Biotechnology, Amity University Chhattisgarh, Raipur 493225, India; (P.D.V.N.S.); (S.C.)
| | - Sushma Chauhan
- Amity Institute of Biotechnology, Amity University Chhattisgarh, Raipur 493225, India; (P.D.V.N.S.); (S.C.)
| | - Rambabu Ratnala
- TATA Institute for Genetics and Society, Bangalore 560065, India;
| | - Vanisri Satturu
- Institute of Biotechnology, Professor Jayashankar Telangana State Agricultural University, Rajendranagar, Hyderabad 500030, India;
| | - Pranab Behari Mazumder
- Department of Biotechnology, Assam University Silchar, Assam 788011, India; (U.K.V.); (P.B.M.)
| | - Piyush Pandey
- Department of Microbiology, Assam University Silchar, Assam 788011, India; (J.R.); (L.P.S.)
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22
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Capriotti AL, Cerrato A, Aita SE, Montone CM, Piovesana S, Laganà A, Cavaliere C. Degradation of the polar lipid and fatty acid molecular species in extra virgin olive oil during storage based on shotgun lipidomics. J Chromatogr A 2021; 1639:461881. [PMID: 33486446 DOI: 10.1016/j.chroma.2021.461881] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/18/2020] [Revised: 12/17/2020] [Accepted: 01/02/2021] [Indexed: 12/15/2022]
Abstract
Among the bioactive compounds present in extra-virgin olive oil, polar lipids and free fatty acids are minor compounds with well-known nutritional values and have been studied for traceability and adulteration investigations as well. In the present paper, the simultaneous characterization of polar lipids and free fatty acids in a pool of fifteen EVOO samples was achieved by means of reversed phase C18 analysis coupled to negative polarity high-resolution mass spectrometry. A total of 24 polar lipids, comprising 19 phospholipids and 5 sulfolipids, and 27 free fatty acids were tentatively identified, including several odd-chain and very long-chain fatty acids at trace levels. Moreover, a one-month study of lipid degradation on simulated storage conditions was carried out thanks to the set-up of a dedicated approach for degradation product analysis which was implemented of Compound Discoverer software. By virtue of the customized data processing workflow, more than forty compounds were tentatively identified, including compounds deriving from hydrolysis and oxidation reactions. Finally, by analysis of peak area trends, phosphoester hydrolyses of polar heads of phospholipids emerged as the fastest reactions, followed by glycerol ester hydrolyses and oxidative processes.
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Affiliation(s)
- Anna Laura Capriotti
- Department of Chemistry, Università di Roma "La Sapienza", Piazzale Aldo Moro 5, Rome 00185, Italy
| | - Andrea Cerrato
- Department of Chemistry, Università di Roma "La Sapienza", Piazzale Aldo Moro 5, Rome 00185, Italy
| | - Sara Elsa Aita
- Department of Chemistry, Università di Roma "La Sapienza", Piazzale Aldo Moro 5, Rome 00185, Italy
| | - Carmela Maria Montone
- Department of Chemistry, Università di Roma "La Sapienza", Piazzale Aldo Moro 5, Rome 00185, Italy
| | - Susy Piovesana
- Department of Chemistry, Università di Roma "La Sapienza", Piazzale Aldo Moro 5, Rome 00185, Italy
| | - Aldo Laganà
- Department of Chemistry, Università di Roma "La Sapienza", Piazzale Aldo Moro 5, Rome 00185, Italy; CNR NANOTEC, Campus Ecotekne, University of Salento, Via Monteroni, Lecce 73100, Italy.
| | - Chiara Cavaliere
- Department of Chemistry, Università di Roma "La Sapienza", Piazzale Aldo Moro 5, Rome 00185, Italy
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23
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Baslam M, Mitsui T, Sueyoshi K, Ohyama T. Recent Advances in Carbon and Nitrogen Metabolism in C3 Plants. Int J Mol Sci 2020; 22:E318. [PMID: 33396811 PMCID: PMC7795015 DOI: 10.3390/ijms22010318] [Citation(s) in RCA: 44] [Impact Index Per Article: 11.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/12/2020] [Revised: 12/23/2020] [Accepted: 12/23/2020] [Indexed: 12/19/2022] Open
Abstract
C and N are the most important essential elements constituting organic compounds in plants. The shoots and roots depend on each other by exchanging C and N through the xylem and phloem transport systems. Complex mechanisms regulate C and N metabolism to optimize plant growth, agricultural crop production, and maintenance of the agroecosystem. In this paper, we cover the recent advances in understanding C and N metabolism, regulation, and transport in plants, as well as their underlying molecular mechanisms. Special emphasis is given to the mechanisms of starch metabolism in plastids and the changes in responses to environmental stress that were previously overlooked, since these changes provide an essential store of C that fuels plant metabolism and growth. We present general insights into the system biology approaches that have expanded our understanding of core biological questions related to C and N metabolism. Finally, this review synthesizes recent advances in our understanding of the trade-off concept that links C and N status to the plant's response to microorganisms.
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Affiliation(s)
- Marouane Baslam
- Laboratory of Biochemistry, Faculty of Agriculture, Niigata University, Niigata 950-2181, Japan; (M.B.); (T.M.)
| | - Toshiaki Mitsui
- Laboratory of Biochemistry, Faculty of Agriculture, Niigata University, Niigata 950-2181, Japan; (M.B.); (T.M.)
- Department of Life and Food Sciences, Graduate School of Science and Technology, Niigata University, Niigata 950-2181, Japan;
| | - Kuni Sueyoshi
- Department of Life and Food Sciences, Graduate School of Science and Technology, Niigata University, Niigata 950-2181, Japan;
| | - Takuji Ohyama
- Department of Life and Food Sciences, Graduate School of Science and Technology, Niigata University, Niigata 950-2181, Japan;
- Faculty of Applied Biosciences, Tokyo University of Agriculture, Tokyo 156-8502, Japan
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24
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Ghirardo A, Fochi V, Lange B, Witting M, Schnitzler JP, Perotto S, Balestrini R. Metabolomic adjustments in the orchid mycorrhizal fungus Tulasnella calospora during symbiosis with Serapias vomeracea. THE NEW PHYTOLOGIST 2020; 228:1939-1952. [PMID: 32668507 DOI: 10.1111/nph.16812] [Citation(s) in RCA: 17] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/05/2020] [Accepted: 07/06/2020] [Indexed: 05/25/2023]
Abstract
All orchids rely on mycorrhizal fungi for organic carbon, at least during early development. In fact, orchid seed germination leads to the formation of a protocorm, a heterotrophic postembryonic structure colonized by intracellular fungal coils, thought to be the site of nutrient transfer. The molecular mechanisms underlying mycorrhizal interactions and metabolic changes induced by this symbiosis in both partners remain mostly unknown. We studied plant-fungus interactions in the mycorrhizal association between the Mediterranean orchid Serapias vomeracea and the basidiomycete Tulasnella calospora using nontargeted metabolomics. Plant and fungal metabolomes obtained from symbiotic structures were compared with those obtained under asymbiotic conditions. Symbiosis induced substantial metabolomic alterations in both partners. In particular, structural and signaling lipid compounds increased markedly in the external fungal mycelium growing near the symbiotic protocorms, whereas chito-oligosaccharides were identified uniquely in symbiotic protocorms. This work represents the first description of metabolic changes occurring in orchid mycorrhiza. These results - combined with previous transcriptomic data - provide novel insights on the mechanisms underlying the orchid mycorrhizal association and open intriguing questions on the role of fungal lipids in this symbiosis.
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Affiliation(s)
- Andrea Ghirardo
- Research Unit Environmental Simulation (EUS), Institute of Biochemical Plant Pathology, Helmholtz Zentrum München, Ingolstädter Landstr. 1, Neuherberg, 85764, Germany
| | - Valeria Fochi
- Department of Life Sciences and Systems Biology, University of Turin, Viale Mattioli 25, Torino, 10125, Italy
- Institute for Sustainable Plant Protection, National Research Council, Viale Mattioli 25, Torino, 10125, Italy
| | - Birgit Lange
- Research Unit Environmental Simulation (EUS), Institute of Biochemical Plant Pathology, Helmholtz Zentrum München, Ingolstädter Landstr. 1, Neuherberg, 85764, Germany
| | - Michael Witting
- Research Unit Analytical BioGeoChemistry, Helmholtz Zentrum München, Ingolstädter Landstr. 1, Neuherberg, 85764, Germany
| | - Jörg-Peter Schnitzler
- Research Unit Environmental Simulation (EUS), Institute of Biochemical Plant Pathology, Helmholtz Zentrum München, Ingolstädter Landstr. 1, Neuherberg, 85764, Germany
| | - Silvia Perotto
- Department of Life Sciences and Systems Biology, University of Turin, Viale Mattioli 25, Torino, 10125, Italy
- Institute for Sustainable Plant Protection, National Research Council, Viale Mattioli 25, Torino, 10125, Italy
| | - Raffaella Balestrini
- Institute for Sustainable Plant Protection, National Research Council, Viale Mattioli 25, Torino, 10125, Italy
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25
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Mechri B, Tekaya M, Attia F, Hammami M, Chehab H. Drought stress improved the capacity of Rhizophagus irregularis for inducing the accumulation of oleuropein and mannitol in olive (Olea europaea) roots. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2020; 156:178-191. [PMID: 32961433 DOI: 10.1016/j.plaphy.2020.09.011] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/18/2020] [Accepted: 09/04/2020] [Indexed: 06/11/2023]
Abstract
Olive trees are often subjected to a prolonged dry season with low water availability, which induces oxidative stress. Arbuscular mycorrhizal (AM) symbioses can improve olive plant tolerance to water deficit. This study investigated several aspects related to drought tolerance in AM fungi olive plants. Non-AM and AM plants were grown under well-watered or drought-stressed conditions, and mycorrhizal growth response, neutral lipid fatty acid (NLFA)16:1ω5 and phospholipid fatty acid (PLFA) 16:1ω5 in roots (intraradical mycelium) and in soil (extraradical mycelium), carbohydrates (monosaccharides, disaccharides and polyols) and phenolic compounds (phenolic alcohols, flavonoids, lignans, secoiridoids and hydroxycinnamic acid derivatives) were determined. Results showed that the amounts of PLFA 16:1ω5 and NLFA 16:1ω5 were significantly influenced by drought stress conditions. The NLFA 16:1ω5/PLFA 16:1ω5 ratio showed a dramatic decrease (-62%) with the application of water deficit stress, indicating that AM fungi allocated low carbon to storage structures under stress conditions. Mannitol and verbascoside are the main compounds detected in the roots of well-watered plants, whereas oleuropein and mannitol are the main compounds differentially accumulated in the roots of water-stressed plants. The oleuropein/verbascoside ratio increased in the case of drought-stressed AM plants by 30%, while the mannitol/oleuropein ratio was decreased by 46%, when compared to the non-AM stressed plants. Mycorrhization therefore oriented the flux toward the biosynthetic pathway of oleuropein and the data suggest that sugar and phenolic compound metabolism may have been redirected to the formation of oleuropein in roots of AM stressed plants, that may underlie their enhanced tolerance to drought stress.
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Affiliation(s)
- Beligh Mechri
- Laboratory of Biochemistry, USCR Mass Spectrometry, LR-NAFS/LR12ES05 Nutrition Functional Foods and Vascular Health, Faculty of Medicine, University of Monastir, 5019, Monastir, Tunisia.
| | - Meriem Tekaya
- Laboratory of Biochemistry, USCR Mass Spectrometry, LR-NAFS/LR12ES05 Nutrition Functional Foods and Vascular Health, Faculty of Medicine, University of Monastir, 5019, Monastir, Tunisia
| | - Faouzi Attia
- The Olive Tree Institute, Unit Specializing in Sousse, Ibn Khaldoun Street B.P. 14, 4061, Sousse, Tunisia
| | - Mohamed Hammami
- Laboratory of Biochemistry, USCR Mass Spectrometry, LR-NAFS/LR12ES05 Nutrition Functional Foods and Vascular Health, Faculty of Medicine, University of Monastir, 5019, Monastir, Tunisia
| | - Hechmi Chehab
- The Olive Tree Institute, Unit Specializing in Sousse, Ibn Khaldoun Street B.P. 14, 4061, Sousse, Tunisia
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26
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Sharma M, Sudheer S, Usmani Z, Rani R, Gupta P. Deciphering the Omics of Plant-Microbe Interaction: Perspectives and New Insights. Curr Genomics 2020; 21:343-362. [PMID: 33093798 PMCID: PMC7536805 DOI: 10.2174/1389202921999200515140420] [Citation(s) in RCA: 34] [Impact Index Per Article: 8.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/02/2020] [Revised: 03/29/2020] [Accepted: 04/17/2020] [Indexed: 12/19/2022] Open
Abstract
Introduction Plants do not grow in isolation, rather they are hosts to a variety of microbes in their natural environments. While, few thrive in the plants for their own benefit, others may have a direct impact on plants in a symbiotic manner. Unraveling plant-microbe interactions is a critical component in recognizing the positive and negative impacts of microbes on plants. Also, by affecting the environment around plants, microbes may indirectly influence plants. The progress in sequencing technologies in the genomics era and several omics tools has accelerated in biological science. Studying the complex nature of plant-microbe interactions can offer several strategies to increase the productivity of plants in an environmentally friendly manner by providing better insights. This review brings forward the recent works performed in building omics strategies that decipher the interactions between plant-microbiome. At the same time, it further explores other associated mutually beneficial aspects of plant-microbe interactions such as plant growth promotion, nitrogen fixation, stress suppressions in crops and bioremediation; as well as provides better insights on metabolic interactions between microbes and plants through omics approaches. It also aims to explore advances in the study of Arabidopsis as an important avenue to serve as a baseline tool to create models that help in scrutinizing various factors that contribute to the elaborate relationship between plants and microbes. Causal relationships between plants and microbes can be established through systematic gnotobiotic experimental studies to test hypotheses on biologically derived interactions. Conclusion This review will cover recent advances in the study of plant-microbe interactions keeping in view the advantages of these interactions in improving nutrient uptake and plant health.
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Affiliation(s)
- Minaxi Sharma
- 1Department of Food Technology, ACA, Eternal University, Baru Sahib (173001), Himachal Pradesh, India; 2Department of Botany, Institute of Ecology and Earth Sciences, University of Tartu, Lai 40, Tartu, Estonia; 3Department of Chemistry and Biotechnology, Tallinn University of Technology, Tallinn12612, Estonia; 4Applied Microbiology Laboratory, Department of Environmental Science and Engineering, Indian Institute of Technology (ISM), Dhanbad, India
| | - Surya Sudheer
- 1Department of Food Technology, ACA, Eternal University, Baru Sahib (173001), Himachal Pradesh, India; 2Department of Botany, Institute of Ecology and Earth Sciences, University of Tartu, Lai 40, Tartu, Estonia; 3Department of Chemistry and Biotechnology, Tallinn University of Technology, Tallinn12612, Estonia; 4Applied Microbiology Laboratory, Department of Environmental Science and Engineering, Indian Institute of Technology (ISM), Dhanbad, India
| | - Zeba Usmani
- 1Department of Food Technology, ACA, Eternal University, Baru Sahib (173001), Himachal Pradesh, India; 2Department of Botany, Institute of Ecology and Earth Sciences, University of Tartu, Lai 40, Tartu, Estonia; 3Department of Chemistry and Biotechnology, Tallinn University of Technology, Tallinn12612, Estonia; 4Applied Microbiology Laboratory, Department of Environmental Science and Engineering, Indian Institute of Technology (ISM), Dhanbad, India
| | - Rupa Rani
- 1Department of Food Technology, ACA, Eternal University, Baru Sahib (173001), Himachal Pradesh, India; 2Department of Botany, Institute of Ecology and Earth Sciences, University of Tartu, Lai 40, Tartu, Estonia; 3Department of Chemistry and Biotechnology, Tallinn University of Technology, Tallinn12612, Estonia; 4Applied Microbiology Laboratory, Department of Environmental Science and Engineering, Indian Institute of Technology (ISM), Dhanbad, India
| | - Pratishtha Gupta
- 1Department of Food Technology, ACA, Eternal University, Baru Sahib (173001), Himachal Pradesh, India; 2Department of Botany, Institute of Ecology and Earth Sciences, University of Tartu, Lai 40, Tartu, Estonia; 3Department of Chemistry and Biotechnology, Tallinn University of Technology, Tallinn12612, Estonia; 4Applied Microbiology Laboratory, Department of Environmental Science and Engineering, Indian Institute of Technology (ISM), Dhanbad, India
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27
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Sanmartín N, Sánchez-Bel P, Pastor V, Pastor-Fernández J, Mateu D, Pozo MJ, Cerezo M, Flors V. Root-to-shoot signalling in mycorrhizal tomato plants upon Botrytis cinerea infection. PLANT SCIENCE : AN INTERNATIONAL JOURNAL OF EXPERIMENTAL PLANT BIOLOGY 2020; 298:110595. [PMID: 32771152 DOI: 10.1016/j.plantsci.2020.110595] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/08/2020] [Revised: 07/03/2020] [Accepted: 07/05/2020] [Indexed: 05/27/2023]
Abstract
Arbuscular mycorrhizal symbiosis is restricted in roots, but it also improves shoot responses against leaf challenges, a phenomenon known as Mycorrhiza-Induced Resistance (MIR). This study focuses on mycorrhizal root signals that may orchestrate shoot defence responses. Metabolomic analysis of non-mycorrhizal and mycorrhizal plants upon Botrytis cinerea infection showed that roots rearrange their metabolome mostly in response to the symbiosis, whereas in shoots a stronger impact of the infection is observed. Specific clusters of compounds in shoots and roots display a priming profile suggesting an implication in the enhanced resistance observed in mycorrhizal plants. Among the primed pathways in roots, lignans showed the highest number of hits followed by oxocarboxylic acids, compounds of the amino acid metabolism, and phytohormones. The lignan yatein was present at higher concentrations in roots, root efflux and leaves of mycorrhizal plants This lignan displayed in vitro antimicrobial activity against B. cinerea and it was also functional protecting tomato plants. Besides, several JA defence-related genes were upregulated in mycorrhizal roots regardless of the pathogen infection, whereas PIN-II was primed in roots of mycorrhizal infected plants. These observations suggest that the enhanced resistance in shoots during MIR may be coordinated by lignans and oxylipins with the participation of roots.
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Affiliation(s)
- Neus Sanmartín
- Metabolic Integration and Cell Signaling Laboratory, Plant Physiology Section, Unidad Asociada al Consejo Superior de Investigaciones Científicas (EEZ-CSIC), Department of Ciencias Agrarias y del Medio Natural, Universitat Jaume I, Castellón, Spain
| | - Paloma Sánchez-Bel
- Metabolic Integration and Cell Signaling Laboratory, Plant Physiology Section, Unidad Asociada al Consejo Superior de Investigaciones Científicas (EEZ-CSIC), Department of Ciencias Agrarias y del Medio Natural, Universitat Jaume I, Castellón, Spain
| | - Victoria Pastor
- Metabolic Integration and Cell Signaling Laboratory, Plant Physiology Section, Unidad Asociada al Consejo Superior de Investigaciones Científicas (EEZ-CSIC), Department of Ciencias Agrarias y del Medio Natural, Universitat Jaume I, Castellón, Spain
| | - Julia Pastor-Fernández
- Metabolic Integration and Cell Signaling Laboratory, Plant Physiology Section, Unidad Asociada al Consejo Superior de Investigaciones Científicas (EEZ-CSIC), Department of Ciencias Agrarias y del Medio Natural, Universitat Jaume I, Castellón, Spain
| | - Diego Mateu
- Metabolic Integration and Cell Signaling Laboratory, Plant Physiology Section, Unidad Asociada al Consejo Superior de Investigaciones Científicas (EEZ-CSIC), Department of Ciencias Agrarias y del Medio Natural, Universitat Jaume I, Castellón, Spain
| | - María José Pozo
- Department of Soil Microbiology and Symbiotic Systems, Estación Experimental del Zaidín (CSIC), Granada, Spain
| | - Miguel Cerezo
- Metabolic Integration and Cell Signaling Laboratory, Plant Physiology Section, Unidad Asociada al Consejo Superior de Investigaciones Científicas (EEZ-CSIC), Department of Ciencias Agrarias y del Medio Natural, Universitat Jaume I, Castellón, Spain
| | - Víctor Flors
- Metabolic Integration and Cell Signaling Laboratory, Plant Physiology Section, Unidad Asociada al Consejo Superior de Investigaciones Científicas (EEZ-CSIC), Department of Ciencias Agrarias y del Medio Natural, Universitat Jaume I, Castellón, Spain.
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Dong W, Song Y. The Significance of Flavonoids in the Process of Biological Nitrogen Fixation. Int J Mol Sci 2020; 21:E5926. [PMID: 32824698 PMCID: PMC7460597 DOI: 10.3390/ijms21165926] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/09/2020] [Revised: 08/12/2020] [Accepted: 08/14/2020] [Indexed: 11/16/2022] Open
Abstract
Nitrogen is essential for the growth of plants. The ability of some plant species to obtain all or part of their requirement for nitrogen by interacting with microbial symbionts has conferred a major competitive advantage over those plants unable to do so. The function of certain flavonoids (a group of secondary metabolites produced by the plant phenylpropanoid pathway) within the process of biological nitrogen fixation carried out by Rhizobium spp. has been thoroughly researched. However, their significance to biological nitrogen fixation carried out during the actinorhizal and arbuscular mycorrhiza-Rhizobium-legume interaction remains unclear. This review catalogs and contextualizes the role of flavonoids in the three major types of root endosymbiosis responsible for biological nitrogen fixation. The importance of gaining an understanding of the molecular basis of endosymbiosis signaling, as well as the potential of and challenges facing modifying flavonoids either quantitatively and/or qualitatively are discussed, along with proposed strategies for both optimizing the process of nodulation and widening the plant species base, which can support nodulation.
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Affiliation(s)
| | - Yuguang Song
- School of Life Science, Qufu Normal University, Qufu 273165, China;
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Kaur S, Suseela V. Unraveling Arbuscular Mycorrhiza-Induced Changes in Plant Primary and Secondary Metabolome. Metabolites 2020; 10:E335. [PMID: 32824704 PMCID: PMC7464697 DOI: 10.3390/metabo10080335] [Citation(s) in RCA: 66] [Impact Index Per Article: 16.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/18/2020] [Revised: 08/02/2020] [Accepted: 08/12/2020] [Indexed: 01/10/2023] Open
Abstract
Arbuscular mycorrhizal fungi (AMF) is among the most ubiquitous plant mutualists that enhance plant growth and yield by facilitating the uptake of phosphorus and water. The countless interactions that occur in the rhizosphere between plants and its AMF symbionts are mediated through the plant and fungal metabolites that ensure partner recognition, colonization, and establishment of the symbiotic association. The colonization and establishment of AMF reprogram the metabolic pathways of plants, resulting in changes in the primary and secondary metabolites, which is the focus of this review. During initial colonization, plant-AMF interaction is facilitated through the regulation of signaling and carotenoid pathways. After the establishment, the AMF symbiotic association influences the primary metabolism of the plant, thus facilitating the sharing of photosynthates with the AMF. The carbon supply to AMF leads to the transport of a significant amount of sugars to the roots, and also alters the tricarboxylic acid cycle. Apart from the nutrient exchange, the AMF imparts abiotic stress tolerance in host plants by increasing the abundance of several primary metabolites. Although AMF initially suppresses the defense response of the host, it later primes the host for better defense against biotic and abiotic stresses by reprogramming the biosynthesis of secondary metabolites. Additionally, the influence of AMF on signaling pathways translates to enhanced phytochemical content through the upregulation of the phenylpropanoid pathway, which improves the quality of the plant products. These phytometabolome changes induced by plant-AMF interaction depends on the identity of both plant and AMF species, which could contribute to the differential outcome of this symbiotic association. A better understanding of the phytochemical landscape shaped by plant-AMF interactions would enable us to harness this symbiotic association to enhance plant performance, particularly under non-optimal growing conditions.
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Affiliation(s)
| | - Vidya Suseela
- Department of Plant and Environmental Sciences, Clemson University, Clemson, SC 29634, USA;
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30
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Ortíz J, Sanhueza C, Romero-Munar A, Hidalgo-Castellanos J, Castro C, Bascuñán-Godoy L, Coba de la Peña T, López-Gómez M, Florez-Sarasa I, Del-Saz NF. In Vivo Metabolic Regulation of Alternative Oxidase under Nutrient Deficiency-Interaction with Arbuscular Mycorrhizal Fungi and Rhizobium Bacteria. Int J Mol Sci 2020; 21:E4201. [PMID: 32545597 PMCID: PMC7349880 DOI: 10.3390/ijms21124201] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/15/2020] [Revised: 06/05/2020] [Accepted: 06/10/2020] [Indexed: 02/02/2023] Open
Abstract
The interaction of the alternative oxidase (AOX) pathway with nutrient metabolism is important for understanding how respiration modulates ATP synthesis and carbon economy in plants under nutrient deficiency. Although AOX activity reduces the energy yield of respiration, this enzymatic activity is upregulated under stress conditions to maintain the functioning of primary metabolism. The in vivo metabolic regulation of AOX activity by phosphorus (P) and nitrogen (N) and during plant symbioses with Arbuscular mycorrhizal fungi (AMF) and Rhizobium bacteria is still not fully understood. We highlight several findings and open questions concerning the in vivo regulation of AOX activity and its impact on plant metabolism during P deficiency and symbiosis with AMF. We also highlight the need for the identification of which metabolic regulatory factors of AOX activity are related to N availability and nitrogen-fixing legume-rhizobia symbiosis in order to improve our understanding of N assimilation and biological nitrogen fixation.
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Affiliation(s)
- José Ortíz
- Laboratorio de Fisiología Vegetal, Departamento de Botánica, Facultad de Ciencias Naturales y Oceanográficas, Universidad de Concepción, 4030000 Concepción, Chile; (J.O.); (C.S.); (C.C.); (L.B.-G.)
| | - Carolina Sanhueza
- Laboratorio de Fisiología Vegetal, Departamento de Botánica, Facultad de Ciencias Naturales y Oceanográficas, Universidad de Concepción, 4030000 Concepción, Chile; (J.O.); (C.S.); (C.C.); (L.B.-G.)
| | - Antònia Romero-Munar
- Centro de Estudios Avanzados en Fruticultura (CEAF), Camino Las Parcelas 882, km 105 Ruta 5 Sur. Sector los Choapinos, 2940000 Rengo, Chile;
| | - Javier Hidalgo-Castellanos
- Department of Plant Physiology, Faculty of sciences, University of Granada, 18071 Granada, Spain; (J.H.-C.); (M.L.-G.)
| | - Catalina Castro
- Laboratorio de Fisiología Vegetal, Departamento de Botánica, Facultad de Ciencias Naturales y Oceanográficas, Universidad de Concepción, 4030000 Concepción, Chile; (J.O.); (C.S.); (C.C.); (L.B.-G.)
| | - Luisa Bascuñán-Godoy
- Laboratorio de Fisiología Vegetal, Departamento de Botánica, Facultad de Ciencias Naturales y Oceanográficas, Universidad de Concepción, 4030000 Concepción, Chile; (J.O.); (C.S.); (C.C.); (L.B.-G.)
| | | | - Miguel López-Gómez
- Department of Plant Physiology, Faculty of sciences, University of Granada, 18071 Granada, Spain; (J.H.-C.); (M.L.-G.)
| | - Igor Florez-Sarasa
- Centre for Research in Agricultural Genomics (CRAG) CSIC-IRTA-UAB-UB, Campus UAB Bellaterra, 08193 Barcelona, Spain;
| | - Néstor Fernández Del-Saz
- Laboratorio de Fisiología Vegetal, Departamento de Botánica, Facultad de Ciencias Naturales y Oceanográficas, Universidad de Concepción, 4030000 Concepción, Chile; (J.O.); (C.S.); (C.C.); (L.B.-G.)
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31
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Ranjbar Sistani N, Desalegn G, Kaul HP, Wienkoop S. Seed Metabolism and Pathogen Resistance Enhancement in Pisum sativum During Colonization of Arbuscular Mycorrhizal Fungi: An Integrative Metabolomics-Proteomics Approach. FRONTIERS IN PLANT SCIENCE 2020; 11:872. [PMID: 32612631 PMCID: PMC7309134 DOI: 10.3389/fpls.2020.00872] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 03/09/2020] [Accepted: 05/28/2020] [Indexed: 06/11/2023]
Abstract
Pulses are one of the most important categories of food plants, and Pea (Pisum sativum L.) as a member of pulses is considered a key crop for food and feed and sustainable agriculture. Integrative multi-omics and microsymbiont impact studies on the plant's immune system are important steps toward more productive and tolerant food plants and thus will help to find solutions against food poverty. Didymella pinodes is a main fungal pathogen of pea plants. Arbuscular mycorrhizal fungi (AMF) promote plant growth and alleviate various stresses. However, it remained unclear as to how the AMF effect on seed metabolism and how this influences resistance against the pathogen. This study assesses the AMF impacts on yield components and seed quality upon D. pinodes infection on two different P. sativum cultivars, susceptible versus tolerant, grown in pots through phenotypic and seed molecular analyses. We found that AMF symbiosis affects the majority of all tested yield components as well as a reduction of disease severity in both cultivars. Seeds of mycorrhizal pea plants showed strong responses of secondary metabolites with nutritional, medicinal, and pharmaceutical attributes, also involved in pathogen response. This is further supported by proteomic data, functionally determining those primary and secondary metabolic pathways, involved in pathogen response and induced upon AMF-colonization. The data also revealed cultivar specific effects of AMF symbiosis that increase understanding of genotype related differences. Additionally, a suite of proteins and secondary metabolites are presented, induced in seeds of P. sativum upon AMF-colonization and pathogen attack, and possibly involved in induced systemic resistance against D. pinodes, useful for modern breeding strategies implementing microsymbionts toward increased pathogen resistance.
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Affiliation(s)
- Nima Ranjbar Sistani
- Department of Ecogenomics and Systems Biology, Faculty of Life Sciences, University of Vienna, Vienna, Austria
| | - Getinet Desalegn
- Department of Crop Sciences, University of Natural Resources and Life Sciences, Vienna, Austria
| | - Hans-Peter Kaul
- Department of Crop Sciences, University of Natural Resources and Life Sciences, Vienna, Austria
| | - Stefanie Wienkoop
- Department of Ecogenomics and Systems Biology, Faculty of Life Sciences, University of Vienna, Vienna, Austria
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32
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Combined Effects of Water Deficit, Exogenous Ethylene Application and Root Symbioses on Trigonelline and ABA Accumulation in Fenugreek. APPLIED SCIENCES-BASEL 2020. [DOI: 10.3390/app10072338] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
Abstract
Secondary metabolites (SMs) have high economic impact thanks to their exploitability in chemical, pharmaceutical and cosmetic industries. Trigonella foenum-graecum has an importance due to the production of bioactive compounds with pharmaceutical values. Among them, the alkaloid trigonelline is known for its role in the treatment of different human diseases. SM accumulation is influenced by environmental factors but is modulated by the application of exogenous compounds. Ethephon, a precursor of the phytohormone ethylene, was already used to influence SM accumulation. Our work is aimed at evaluating the accumulation of trigonelline and the phytohormone abscisic acid (ABA) when three factors were combined: i) two levels of water regimes (well-watered and water deficit), ii) ethephon treatments and iii) inoculation with an arbuscular mycorrhizal (AM)-based inoculum also leading to nodulation. The content of trigonelline and ABA was significantly affected by symbioses, showing high accumulation in AM-colonized plants irrespective of the water regimes applied. In terms of trigonelline accumulation with respect to ethephon treatments, while symbiotic plants showed a dose-dependent trend, non-symbiotic plants showed a significantly difference only when 550 ppm of ethephon was applied. In conclusion, our work provides new information on the effects of both ethephon and symbioses on plant growth and accumulation of valuable compounds, such as trigonelline, in fenugreek.
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Brands M, Cahoon EB, Dörmann P. Palmitvaccenic Acid (Δ11- cis-hexadecenoic acid) Is Synthesized by an OLE1-like Desaturase in the Arbuscular Mycorrhiza Fungus Rhizophagus irregularis. Biochemistry 2020; 59:1163-1172. [PMID: 32135062 DOI: 10.1021/acs.biochem.0c00051] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
Abstract
Arbuscular mycorrhiza (AM) fungi deliver mineral nutrients to the plant host in exchange for reduced carbon in the form of sugars and lipids. Colonization with AM fungi upregulates a specific host lipid synthesis pathway resulting in the production of fatty acids. Predominantly palmitic acid (16:0) and the unusual palmitvaccenic acid (16:1Δ11cis) accumulate in the fungus Rhizophagus irregularis. Here, we present the isolation and characterization of RiOLE1-LIKE, the desaturase involved in palmitvaccenic acid synthesis, by heterologous expression in yeast and plants. Results are in line with the scenario in which RiOLE1-LIKE encodes an acyl-CoA desaturase with substrate specificity for C15-C18 acyl groups, in particular C16. Phylogenetic analysis of RiOLE1-LIKE-related sequences revealed that this gene is conserved in AM fungi from the Glomales and Diversisporales but is absent from nonsymbiotic Mortierellaceae and Mucoromycotina fungi, suggesting that 16:1Δ11cis provides a specific function during AM colonization.
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Affiliation(s)
- Mathias Brands
- Institute of Molecular Physiology and Biotechnology of Plants (IMBIO), University of Bonn, Karlrobert-Kreiten-Straße 13, 53115 Bonn, Germany
| | - Edgar B Cahoon
- Center for Plant Science Information, University of Nebraska, E318 Beadle Center, 1901 Vine Street, Lincoln, Nebraska 68588, United States
| | - Peter Dörmann
- Institute of Molecular Physiology and Biotechnology of Plants (IMBIO), University of Bonn, Karlrobert-Kreiten-Straße 13, 53115 Bonn, Germany
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Zhang Y, Li Y, Chen X, Meng Z, Guo S. Combined Metabolome and Transcriptome Analyses Reveal the Effects of Mycorrhizal Fungus Ceratobasidium sp. AR2 on the Flavonoid Accumulation in Anoectochilus roxburghii during Different Growth Stages. Int J Mol Sci 2020; 21:ijms21020564. [PMID: 31952330 PMCID: PMC7013922 DOI: 10.3390/ijms21020564] [Citation(s) in RCA: 20] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/18/2019] [Revised: 12/29/2019] [Accepted: 01/09/2020] [Indexed: 12/16/2022] Open
Abstract
Anoectochilus roxburghii is a traditional Chinese herb with high medicinal value, with main bioactive constituents which are flavonoids. It commonly associates with mycorrhizal fungi for its growth and development. Moreover, mycorrhizal fungi can induce changes in the internal metabolism of host plants. However, its role in the flavonoid accumulation in A. roxburghii at different growth stages is not well studied. In this study, combined metabolome and transcriptome analyses were performed to investigate the metabolic and transcriptional profiling in mycorrhizal A. roxburghii (M) and non-mycorrhizal A. roxburghii (NM) growth for six months. An association analysis revealed that flavonoid biosynthetic pathway presented significant differences between the M and NM. Additionally, the structural genes related to flavonoid synthesis and different flavonoid metabolites in both groups over a period of six months were validated using quantitative real-time polymerase chain reaction (qRT-PCR) and high-performance liquid chromatography coupled with tandem mass spectrometry (HPLC-MS/MS). The results showed that Ceratobasidium sp. AR2 could increase the accumulation of five flavonol-glycosides (i.e., narcissin, rutin, isorhamnetin-3-O-beta-d-glucoside, quercetin-7-O-glucoside, and kaempferol-3-O-glucoside), two flavonols (i.e., quercetin and isorhamnetin), and two flavones (i.e., nobiletin and tangeretin) to some degrees. The qRT-PCR showed that the flavonoid biosynthetic genes (PAL, 4CL, CHS, GT, and RT) were significantly differentially expressed between the M and NM. Overall, our findings indicate that AR2 induces flavonoid metabolism in A. roxburghii during different growth stages, especially in the third month. This shows great potential of Ceratobasidium sp. AR2 for the quality improvement of A. roxburghii.
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González-González MF, Ocampo-Alvarez H, Santacruz-Ruvalcaba F, Sánchez-Hernández CV, Casarrubias-Castillo K, Becerril-Espinosa A, Castañeda-Nava JJ, Hernández-Herrera RM. Physiological, Ecological, and Biochemical Implications in Tomato Plants of Two Plant Biostimulants: Arbuscular Mycorrhizal Fungi and Seaweed Extract. FRONTIERS IN PLANT SCIENCE 2020; 11:999. [PMID: 32765545 PMCID: PMC7379914 DOI: 10.3389/fpls.2020.00999] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/01/2020] [Accepted: 06/17/2020] [Indexed: 05/14/2023]
Abstract
The worldwide use of plant biostimulants (PBs) represents an environmentally friendly tool to increase crop yield and productivity. PBs include different substances, compounds, and growth-promoting microorganism formulations, such as those derived from arbuscular mycorrhizal fungi (AMF) or seaweed extracts (SEs), which are used to regulate or enhance physiological processes in plants. This study analyzed the physiological, ecological, and biochemical implications of the addition of two PBs, AMF or SE (both alone and in combination), on tomato plants (Solanum lycopersicum L. cv. "Rio Fuego"). The physiological responses evaluated were related to plant growth and photosynthetic performance. The ecological benefits were assessed based on the success of AMF colonization, flowering, resistance capacity, nonphotochemical quenching (NPQ), and polyphenol content. Biochemical effects were evaluated via protein, lipid, carbohydrate, nitrogen, and phosphorous content. Each PB was found to benefit tomato plants in a different but complementary manner. AMF resulted in an energetically expensive (high ETRMAX but low growth) but protective (high NPQ and polyphenol content) response. AMF + nutritive solution (NS) induced early floration but resulted in low protein, carbohydrate, and lipid content. Both AMF and AMF + NS favored foliar instead of root development. In contrast, SE and SE + NS favored protein content and root development and did not promote flowering. However, the combination of both PBs (AMF + SE) resulted in an additive effect, reflected in an increase in both foliar and root growth as well as protein and carbohydrate content. Moreover, a synergistic effect was also found, which was expressed in accelerated flowering and AMF colonization. We present evidence of benefits to plant performance (additive and synergistic) due to the interactive effects between microbial (AMF) and nonmicrobial (SEs) PBs and propose that the complementary modes of action of both PBs may be responsible for the observed positive effects due to the new and emerging properties of their components instead of exclusively being the result of known constituents. These results will be an important contribution to biostimulant research and to the development of a second generation of PBs in which combined and complementary mechanisms may be functionally designed.
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Affiliation(s)
- Mario Felipe González-González
- Laboratorio de Investigación en Biotecnología, Departamento de Botánica y Zoología, Centro Universitario de Ciencias Biológicas y Agropecuarias, Universidad de Guadalajara, Zapopan, Mexico
| | - Héctor Ocampo-Alvarez
- Laboratorio de Ecología Molecular, Microbiología y Taxonomía, Departamento de Ecología, Centro Universitario de Ciencias Biológicas y Agropecuarias, Universidad de Guadalajara, Zapopan, Mexico
| | - Fernando Santacruz-Ruvalcaba
- Laboratorio de Biotecnología Vegetal, Departamento de Producción Agrícola, Centro Universitario de Ciencias Biológicas y Agropecuarias, Universidad de Guadalajara, Zapopan, Mexico
| | - Carla Vanessa Sánchez-Hernández
- Laboratorio de Marcadores Moleculares, Departamento de Producción Agrícola, Centro Universitario de Ciencias Biológicas y Agropecuarias, Universidad de Guadalajara, Zapopan, Mexico
| | - Kena Casarrubias-Castillo
- Laboratorio de Ecología Molecular, Microbiología y Taxonomía, Departamento de Ecología, Centro Universitario de Ciencias Biológicas y Agropecuarias, Universidad de Guadalajara, Zapopan, Mexico
| | - Amayaly Becerril-Espinosa
- CONACYT, Departamento de Ecología, Centro Universitario de Ciencias Biológicas y Agropecuarias, Universidad de Guadalajara, Zapopan, Mexico
| | - José Juvencio Castañeda-Nava
- Unidad de Biotecnología Vegetal, Centro de Investigación y Asistencia en Tecnología y Diseño del Estado de Jalisco (CIATEJ), Zapopan, Mexico
| | - Rosalba Mireya Hernández-Herrera
- Laboratorio de Investigación en Biotecnología, Departamento de Botánica y Zoología, Centro Universitario de Ciencias Biológicas y Agropecuarias, Universidad de Guadalajara, Zapopan, Mexico
- *Correspondence: Rosalba Mireya Hernández-Herrera, ;
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36
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Arbuscular Mycorrhizal Fungi and Their Potential Applications for Sustainable Agriculture. Fungal Biol 2020. [DOI: 10.1007/978-3-030-45971-0_5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/24/2022]
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Salloum MS, Insani M, Monteoliva MI, Menduni MF, Silvente S, Carrari F, Luna C. Metabolic responses to arbuscular mycorrhizal fungi are shifted in roots of contrasting soybean genotypes. MYCORRHIZA 2019; 29:459-473. [PMID: 31410554 DOI: 10.1007/s00572-019-00909-y] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/22/2019] [Accepted: 07/29/2019] [Indexed: 06/10/2023]
Abstract
Modern breeding programs have reduced genetic variability and might have caused a reduction in plant colonization by arbuscular mycorrhizal fungi (AM). In our previous studies, mycorrhizal colonization was affected in improved soybean genotypes, mainly arbuscule formation. Despite substantial knowledge of the symbiosis-related changes of the transcriptome and proteome, only sparse clues regarding metabolite alterations are available. Here, we evaluated metabolite changes between improved (I-1) and unimproved (UI-4) soybean genotypes and also compare their metabolic responses after AM root colonization. Soybean genotypes inoculated or not with AM were grown in a chamber under controlled light and temperature conditions. At 20 days after inoculation, we evaluated soluble metabolites of each genotype and treatment measured by GC-MS. In this analysis, when comparing non-AM roots between genotypes, I-1 had a lower amount of 31 and higher amount of only 4 metabolites than the UI-4 genotype. When comparing AM roots, I-1 had a lower amount of 36 and higher amount of 4 metabolites than UI-4 (different to those found altered in non-AM treated plants). Lastly, comparing the AM vs non-AM treatments, I-1 had increased levels of three and reduced levels of 24 metabolites, while UI-4 only had levels of 12 metabolites reduced by the effect of mycorrhizas. We found the major changes in sugars, polyols, amino acids, and carboxylic acids. In a targeted analysis, we found lower levels of isoflavonoids and alpha-tocopherol and higher levels of malondialdehyde in the I-1 genotype that can affect soybean-AM symbiosis. Our studies have the potential to support improving soybean with a greater capacity to be colonized and responsive to AM interaction.
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Affiliation(s)
- María Soraya Salloum
- Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), Instituto de Fisiología y Recursos Genéticos Vegetales (IFRGV), Centro de Investigación Agropecuaria (CIAP),, Instituto Nacional de Tecnología Agropecuaria (INTA), Camino 60 Cuadras km. 5.5, CP 5119, Córdoba, Argentina.
| | - Marina Insani
- Instituto de Biotecnología, CICVyA, Instituto Nacional de Tecnología Agropecuaria (INTA), Nicolás Repetto y de los Reseros s/n, 1686, Hurlingham, Buenos Aires, Argentina
| | - Mariela Inés Monteoliva
- Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), Instituto de Fisiología y Recursos Genéticos Vegetales (IFRGV), Centro de Investigación Agropecuaria (CIAP),, Instituto Nacional de Tecnología Agropecuaria (INTA), Camino 60 Cuadras km. 5.5, CP 5119, Córdoba, Argentina
| | - María Florencia Menduni
- Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), Fondo para la Investigación Científica y Tecnológica (FONCyT), Instituto de Fisiología y Recursos Genéticos Vegetales (IFRGV), Centro de Investigación Agropecuaria (CIAP),, Instituto Nacional de Tecnología Agropecuaria (INTA),, Camino 60 Cuadras km. 5.5, CP 5119, Córdoba, Argentina
| | - Sonia Silvente
- Instituto de Ambiente de Montaña y Regiones Áridas (IAMRA), Universidad Nacional de Chilecito (UNdeC), Av Los Peregrinos s/n, Chilecito, F5360CKB, La Rioja, Argentina
| | - Fernando Carrari
- Instituto de Fisiología, Biología Molecular y Neurociencias (IFIBYNE-UBA-CONICET) Ciudad Universitaria, C1428EHA, Buenos Aires, Argentina
- Facultad de Agronomía, Universidad de Buenos Aires, Buenos Aires, Argentina
| | - Celina Luna
- Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), Instituto de Fisiología y Recursos Genéticos Vegetales (IFRGV), Centro de Investigación Agropecuaria (CIAP),, Instituto Nacional de Tecnología Agropecuaria (INTA), Camino 60 Cuadras km. 5.5, CP 5119, Córdoba, Argentina
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Bernardo L, Carletti P, Badeck FW, Rizza F, Morcia C, Ghizzoni R, Rouphael Y, Colla G, Terzi V, Lucini L. Metabolomic responses triggered by arbuscular mycorrhiza enhance tolerance to water stress in wheat cultivars. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2019; 137:203-212. [PMID: 30802803 DOI: 10.1016/j.plaphy.2019.02.007] [Citation(s) in RCA: 51] [Impact Index Per Article: 10.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/14/2018] [Revised: 02/10/2019] [Accepted: 02/11/2019] [Indexed: 05/13/2023]
Abstract
Under global climate change forecasts, the pressure of environmental stressors (and in particular drought) on crop productivity is expected to rise and challenge further global food security. The application of beneficial microorganisms may represent an environment friendly tool to secure improved crop performance and yield stability. Accordingly, this current study aimed at elucidating the metabolomic responses triggered by mycorrhizal (Funneliformis mosseae) inoculation of durum (Triticum durum Desf.; cv. 'Mongibello') and bread wheat cultivars (Triticum aestivum L.; cv. 'Chinese Spring') under full irrigation and water deficit regimes. Metabolomics indicated a similar regulation of secondary metabolism in both bread and durum wheat cultivars following water limiting conditions. Nonetheless, a mycorrhizal fungi (AMF) x cultivar interaction could be observed, with the bread wheat cultivar being more affected by arbuscular colonization under water limiting conditions. Discriminant compounds could be mostly related to sugars and lipids, both being positively modulated by AMF colonization under water stress. Moreover, a regulation of metabolites related to oxidative stress and a tuning of crosstalk between phytohormones were also evidenced. Among the latter, the stimulation of the brassinosteroids biosynthetic pathway was particularly evident in inoculated wheat roots, supporting the hypothesis of their involvement in enhancing plant response to water stress and modulation of oxidative stress conditions. This study proposes new insights on the modulation of the tripartite interaction plant-AMF-environmental stress.
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Affiliation(s)
- Letizia Bernardo
- Council for Agricultural Research and Economics- Research Centre for Genomics and Bioinformatics (CREA-GB), via San Protaso 302, 29017, Fiorenzuola d'Arda, PC, Italy; Department for Sustainable Food Process, Research Centre for Nutrigenomics and Proteomics, Università Cattolica del Sacro Cuore, Piacenza, Italy
| | - Paolo Carletti
- Department of Agronomy, Food, Natural Resources, Animals and Environment, Università di Padova, Padova, Italy
| | - Franz W Badeck
- Council for Agricultural Research and Economics- Research Centre for Genomics and Bioinformatics (CREA-GB), via San Protaso 302, 29017, Fiorenzuola d'Arda, PC, Italy
| | - Fulvia Rizza
- Council for Agricultural Research and Economics- Research Centre for Genomics and Bioinformatics (CREA-GB), via San Protaso 302, 29017, Fiorenzuola d'Arda, PC, Italy
| | - Caterina Morcia
- Council for Agricultural Research and Economics- Research Centre for Genomics and Bioinformatics (CREA-GB), via San Protaso 302, 29017, Fiorenzuola d'Arda, PC, Italy
| | - Roberta Ghizzoni
- Council for Agricultural Research and Economics- Research Centre for Genomics and Bioinformatics (CREA-GB), via San Protaso 302, 29017, Fiorenzuola d'Arda, PC, Italy
| | - Youssef Rouphael
- Department of Agricultural Sciences, University of Naples Federico II, Portici, Italy
| | - Giuseppe Colla
- Department of Agriculture and Forest Sciences, University of Tuscia, Viterbo, Italy
| | - Valeria Terzi
- Council for Agricultural Research and Economics- Research Centre for Genomics and Bioinformatics (CREA-GB), via San Protaso 302, 29017, Fiorenzuola d'Arda, PC, Italy
| | - Luigi Lucini
- Department for Sustainable Food Process, Research Centre for Nutrigenomics and Proteomics, Università Cattolica del Sacro Cuore, Piacenza, Italy.
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Rivero J, Álvarez D, Flors V, Azcón-Aguilar C, Pozo MJ. Root metabolic plasticity underlies functional diversity in mycorrhiza-enhanced stress tolerance in tomato. THE NEW PHYTOLOGIST 2018; 220:1322-1336. [PMID: 29982997 DOI: 10.1111/nph.15295] [Citation(s) in RCA: 26] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/15/2018] [Accepted: 05/30/2018] [Indexed: 05/07/2023]
Abstract
Arbuscular mycorrhizal (AM) symbioses can improve plant tolerance to multiple stresses. We compared three AM fungi (AMF) from different genera, one of them isolated from a dry and saline environment, in terms of their ability to increase tomato tolerance to moderate or severe drought or salt stress. Plant physiological parameters and metabolic profiles were compared in order to find the molecular mechanisms underlying plant protection against stress. Mycorrhizal growth response was determined, and ultrahigh-performance LC-MS was used to compare the metabolic profile of plants under the different treatments. All AMF increased plant tolerance to stress, and the positive effects of the symbiosis were correlated with the severity of the stress. The AMF isolated from the stressful environment was the most effective in improving plant tolerance to salt stress. Differentially accumulated compounds were identified and the antistress properties of some of them were confirmed. We demonstrate that AM symbioses increase plant metabolic plasticity to cope with stress. Some responses were common to all AMF tested, while others were specifically related to particular isolates. Important metabolism reprograming was evidenced upon salt stress, and we identified metabolic pathways and compounds differentially accumulated in mycorrhizas that may underlie their enhanced tolerance to stress.
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Affiliation(s)
- Javier Rivero
- Department of Soil Microbiology and Symbiotic Systems, Estación Experimental del Zaidín, CSIC, Profesor Albareda 1, Granada, 18008, Spain
| | - Domingo Álvarez
- Department of Soil Microbiology and Symbiotic Systems, Estación Experimental del Zaidín, CSIC, Profesor Albareda 1, Granada, 18008, Spain
| | - Víctor Flors
- Metabolic Integration and Cell Signaling Laboratory, CSIC Associated Unit, Plant Physiology Section, Department of Agricultural and Environmental Sciences, Universitat Jaume I (UJI), Campus del Riu Sec, Castellón de la Plana 12071, Spain
| | - Concepción Azcón-Aguilar
- Department of Soil Microbiology and Symbiotic Systems, Estación Experimental del Zaidín, CSIC, Profesor Albareda 1, Granada, 18008, Spain
| | - María J Pozo
- Department of Soil Microbiology and Symbiotic Systems, Estación Experimental del Zaidín, CSIC, Profesor Albareda 1, Granada, 18008, Spain
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Fan Q, Creamer R, Li Y. Time-course metabolic profiling in alfalfa leaves under Phoma medicaginis infection. PLoS One 2018; 13:e0206641. [PMID: 30372486 PMCID: PMC6205659 DOI: 10.1371/journal.pone.0206641] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/14/2018] [Accepted: 10/16/2018] [Indexed: 01/24/2023] Open
Abstract
Information on disease process and pathogenicity mechanisms is important for understanding plant disease. Spring black stem and leaf spot caused by the necrotrophic pathogen Phoma medicaginis var. medicaginis Malbr. & Roum causes large losses to alfalfa. However, till now, little is known about alfalfa-P. medicagnis interactions and the pathogenicity mechanisms of the pathogen. Here, alfalfa inoculated with P. medicaginis was subjected to GC-MS based metabolic profiling. The metabolic response in P. medicaginis-inoculated and mock-inoculated alfalfa leaves was assessed at 2, 4, 6, 8, 12, 16, 20, 24, 26 and 28 days post inoculation. In total, 101 peaks were detected in the control and inoculated groups, from which 70 metabolites were tentatively identified. Using multivariate analysis, 16 significantly regulated compounds, including amino acids, nitrogen-containing compounds and organic acids, polyols, fatty acids, and sugars were tentatively identified (Variable importance values, VIP>1.0 and p <0.05). Among these metabolites, the levels of malate, 5-oxoproline, palmitic acid and stearic acid were increased significantly in P. medicaginis-infected alfalfa leaves compared to the controls. In contrast, the levels ofγ-aminobutyric acid and 2-pyrrolidinone were significantly decreased in infected leaves compared to the controls. Further metabolic pathway analysis of the 16 significantly regulated compounds demonstrated that glycolysis, the tricarboxylic acid cycle, and β-oxidation of fatty acids were significantly induced in the alfalfa leaves at later stages of P. medicaginis infection. The strong induction of tricarboxylic acid cycle pathways at later infection stages caused by the pathogen may induce senescence in the alfalfa leaves, leading to plant death. However, intermediate metabolites of these metabolic pathways, and inositol phosphate, glutathione, the metabolic pathways of some amino acids accumulated rapidly and strongly at early stages of infection, which may enhance the ability of alfalfa to resist necrotrophic P. medicaginis disease. Understanding metabolic pathways is essential for understanding pathogenesis.
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Affiliation(s)
- Qin Fan
- State Key Laboratory of Grassland Agro-ecosystems, Key Laboratory of Grassland Livestock Industry Innovation, Ministry of Ministry of Agriculture and Rural Affairs, Engineering Research Center of Grassland Industry, Ministry of Education, College of Pastoral Agriculture Science and Technology, Lanzhou University, Lanzhou, Gansu Province, China
- Gansu University of Chinese Medicine, Lanzhou, Gansu Province, China
| | - Rebecca Creamer
- New Mexico State University, Las Cruces, New Mexico, United States of America
| | - Yanzhong Li
- State Key Laboratory of Grassland Agro-ecosystems, Key Laboratory of Grassland Livestock Industry Innovation, Ministry of Ministry of Agriculture and Rural Affairs, Engineering Research Center of Grassland Industry, Ministry of Education, College of Pastoral Agriculture Science and Technology, Lanzhou University, Lanzhou, Gansu Province, China
- Institute of Grassland Research, Chinese Academy of Agricultural Sciences (CAAS), Hohhot, China
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Avio L, Turrini A, Giovannetti M, Sbrana C. Designing the Ideotype Mycorrhizal Symbionts for the Production of Healthy Food. FRONTIERS IN PLANT SCIENCE 2018; 9:1089. [PMID: 30154803 PMCID: PMC6102486 DOI: 10.3389/fpls.2018.01089] [Citation(s) in RCA: 46] [Impact Index Per Article: 7.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/22/2018] [Accepted: 07/05/2018] [Indexed: 05/03/2023]
Abstract
The new paradigm in agriculture, sustainable intensification, is focusing back onto beneficial soil microorganisms, for the role played in reducing the input of chemical fertilizers and pesticides and improving plant nutrition and health. Worldwide, more and more attention is deserved to arbuscular mycorrhizal fungi (AMF), which establish symbioses with the roots of most land plants and facilitate plant nutrient uptake, by means of a large network of extraradical hyphae spreading from colonized roots to the surrounding soil and functioning as a supplementary absorbing system. AMF protect plants from biotic and abiotic stresses and are able to modulate the activity of antioxidant enzymes and the biosynthesis of secondary metabolites (phytochemicals), such as polyphenols, anthocyanins, phytoestrogens and carotenoids, that play a fundamental role in promoting human health. An increasing number of studies focused on the use of AMF symbionts for the production of functional food, with enhanced nutritional and nutraceutical value. Yet, while several plant species were investigated, only few AMF were utilized, thus limiting the full exploitation of their wide physiological and genetic diversity. Here, we will focus on AMF effects on the biosynthesis of plant secondary metabolites with health-promoting activity, and on the criteria for a finely tuned, targeted selection of the best performing symbionts, to be utilized as sustainable biotechnological tools for the production of safe and healthy plant foods.
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Affiliation(s)
- Luciano Avio
- Department of Agriculture, Food and Environment, University of Pisa, Pisa, Italy
| | - Alessandra Turrini
- Department of Agriculture, Food and Environment, University of Pisa, Pisa, Italy
- Interdepartmental Research Center “Nutraceuticals and Food for Health”, University of Pisa, Pisa, Italy
| | - Manuela Giovannetti
- Department of Agriculture, Food and Environment, University of Pisa, Pisa, Italy
- Interdepartmental Research Center “Nutraceuticals and Food for Health”, University of Pisa, Pisa, Italy
| | - Cristiana Sbrana
- Institute of Agricultural Biology and Biotechnology, C.N.R., UOS Pisa, Pisa, Italy
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Gryndler M, Šmilauer P, Püschel D, Bukovská P, Hršelová H, Hujslová M, Gryndlerová H, Beskid O, Konvalinková T, Jansa J. Appropriate nonmycorrhizal controls in arbuscular mycorrhiza research: a microbiome perspective. MYCORRHIZA 2018; 28:435-450. [PMID: 29931404 DOI: 10.1007/s00572-018-0844-x] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/21/2017] [Accepted: 06/13/2018] [Indexed: 05/26/2023]
Abstract
Establishment of nonmycorrhizal controls is a "classic and recurrent theme" in mycorrhizal research. For decades, authors reported mycorrhizal plant growth/nutrition as compared to various nonmycorrhizal controls. In such studies, uncertainties remain about which nonmycorrhizal controls are most appropriate and, in particular, what effects the control inoculations have on substrate and root microbiomes. Here, different types of control and mycorrhizal inoculations were compared with respect to plant growth and nutrition, as well as the structure of root and substrate microbiomes, assessed by next-generation sequencing. We compared uninoculated ("absolute") control to inoculation with blank pot culture lacking arbuscular mycorrhizal fungi, filtrate of that blank inoculum, and filtrate of complex pot-produced mycorrhizal inoculum. Those treatments were compared to a standard mycorrhizal treatment, where the previously sterilized substrate was inoculated with complex pot-produced inoculum containing Rhizophagus irregularis SYM5. Besides this, monoxenically produced inoculum of the same fungus was applied either alone or in combination with blank inoculum. The results indicate that the presence of mycorrhizal fungus always resulted in stimulation of Andropogon gerardii plant biomass as well as in elevated phosphorus content of the plants. The microbial (bacterial and fungal) communities developing in the differently inoculated treatments, however, differed substantially from each other and no control could be obtained comparable with the treatment inoculated with complex mycorrhizal inoculum. Soil microorganisms with significant biological competences that could potentially contribute to the effects of the various inoculants on the plants were detected in roots and in plant cultivation substrate in some of the treatments.
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Affiliation(s)
- Milan Gryndler
- Institute of Microbiology, v.v.i., Academy of Sciences of the Czech Republic, Vídeňská 1083, 142 20, Prague 4, Czech Republic.
- Faculty of Science, Jan Evangelista Purkyně University in Ústí nad Labem, České mládeže 8, 400 96, Ústí nad Labem, Czech Republic.
| | - Petr Šmilauer
- Faculty of Science, University of South Bohemia, České Budějovice, Czech Republic
| | - David Püschel
- Institute of Microbiology, v.v.i., Academy of Sciences of the Czech Republic, Vídeňská 1083, 142 20, Prague 4, Czech Republic
| | - Petra Bukovská
- Institute of Microbiology, v.v.i., Academy of Sciences of the Czech Republic, Vídeňská 1083, 142 20, Prague 4, Czech Republic
| | - Hana Hršelová
- Institute of Microbiology, v.v.i., Academy of Sciences of the Czech Republic, Vídeňská 1083, 142 20, Prague 4, Czech Republic
| | - Martina Hujslová
- Institute of Microbiology, v.v.i., Academy of Sciences of the Czech Republic, Vídeňská 1083, 142 20, Prague 4, Czech Republic
| | - Hana Gryndlerová
- Institute of Microbiology, v.v.i., Academy of Sciences of the Czech Republic, Vídeňská 1083, 142 20, Prague 4, Czech Republic
| | - Olena Beskid
- Institute of Microbiology, v.v.i., Academy of Sciences of the Czech Republic, Vídeňská 1083, 142 20, Prague 4, Czech Republic
| | - Tereza Konvalinková
- Institute of Microbiology, v.v.i., Academy of Sciences of the Czech Republic, Vídeňská 1083, 142 20, Prague 4, Czech Republic
| | - Jan Jansa
- Institute of Microbiology, v.v.i., Academy of Sciences of the Czech Republic, Vídeňská 1083, 142 20, Prague 4, Czech Republic
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Brands M, Wewer V, Keymer A, Gutjahr C, Dörmann P. The Lotus japonicus acyl-acyl carrier protein thioesterase FatM is required for mycorrhiza formation and lipid accumulation of Rhizophagus irregularis. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2018; 95:219-232. [PMID: 29687516 DOI: 10.1111/tpj.13943] [Citation(s) in RCA: 24] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/23/2017] [Revised: 03/26/2018] [Accepted: 04/05/2018] [Indexed: 05/04/2023]
Abstract
Arbuscular mycorrhiza (AM) fungi establish symbiotic interactions with plants, providing the host plant with minerals, i.e. phosphate, in exchange for organic carbon. Arbuscular mycorrhiza fungi of the order Glomerales produce vesicles which store lipids as an energy and carbon source. Acyl-acyl carrier protein (ACP) thioesterases (Fat) are essential components of the plant plastid-localized fatty acid synthase and determine the chain length of de novo synthesized fatty acids. In addition to the ubiquitous FatA and FatB thioesterases, AM-competent plants contain an additional, AM-specific, FatM gene. Here, we characterize FatM from Lotus japonicus by phenotypically analyzing fatm mutant lines and by studying the biochemical function of the recombinant FatM protein. Reduced shoot phosphate content in fatm indicates compromised symbiotic phosphate uptake due to reduced arbuscule branching, and the fungus shows reduced lipid accumulation accompanied by the occurrence of smaller and less frequent vesicles. Lipid profiling reveals a decrease in mycorrhiza-specific phospholipid forms, AM fungal signature fatty acids (e.g. 16:1ω5, 18:1ω7 and 20:3) and storage lipids. Recombinant FatM shows preference for palmitoyl (16:0)-ACP, indicating that large amounts of 16:0 fatty acid are exported from the plastids of arbuscule-containing cells. Stable isotope labeling with [13 C2 ]acetate showed reduced incorporation into mycorrhiza-specific fatty acids in the fatm mutant. Therefore, colonized cells reprogram plastidial de novo fatty acid synthesis towards the production of extra amounts of 16:0, which is in agreement with previous results that fatty acid-containing lipids are transported from the plant to the fungus.
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Affiliation(s)
- Mathias Brands
- Institute for Molecular Biotechnology and Physiology of Plants (IMBIO), University of Bonn, Karlrobert-Kreiten-Straße 13, 53115, Bonn, Germany
| | - Vera Wewer
- Institute for Molecular Biotechnology and Physiology of Plants (IMBIO), University of Bonn, Karlrobert-Kreiten-Straße 13, 53115, Bonn, Germany
- Center of Excellence in Plant Sciences (CEPLAS), Mass Spectrometry Platform, University of Cologne, Zülpicher Straße 47b, 50674, Cologne, Germany
| | - Andreas Keymer
- Faculty of Biology, Genetics, Biocenter, Martinsried, LMU Munich, Großhaderner Straße 2-4, 82152, Martinsried, Germany
| | - Caroline Gutjahr
- Faculty of Biology, Genetics, Biocenter, Martinsried, LMU Munich, Großhaderner Straße 2-4, 82152, Martinsried, Germany
- Plant Genetics, School of Life Sciences Weihenstephan, Technical University of Munich, Emil Ramann Straße 4, 85354, Freising, Germany
| | - Peter Dörmann
- Institute for Molecular Biotechnology and Physiology of Plants (IMBIO), University of Bonn, Karlrobert-Kreiten-Straße 13, 53115, Bonn, Germany
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Puzanskiy RK, Yemelyanov VV, Kliukova MS, Shavarda AL, Shtark OY, Yurkov AP, Shishova MF. Optimization of Metabolite Profiling for Black Medick (Medicago lupulina) and Peas (Pisum sativum). APPL BIOCHEM MICRO+ 2018. [DOI: 10.1134/s0003683818040129] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
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Berkov S, Georgieva L, Sidjimova B, Nikolova M. Metabolite Profiling of In Vitro Plant Systems. ACTA ACUST UNITED AC 2018. [DOI: 10.1007/978-3-319-54600-1_12] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
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47
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Wang M, Wilde J, Baldwin IT, Groten K. Nicotiana attenuata's capacity to interact with arbuscular mycorrhiza alters its competitive ability and elicits major changes in the leaf transcriptome. JOURNAL OF INTEGRATIVE PLANT BIOLOGY 2018; 60:242-261. [PMID: 29087617 DOI: 10.1111/jipb.12609] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/17/2017] [Accepted: 10/27/2017] [Indexed: 06/07/2023]
Abstract
To study the local and systemic effects of arbuscular mycorrhizal fungal (AMF) colonization, Nicotiana attenuata plants impaired in their interactions with AMF due to silencing of a calcium- and calmodulin dependent protein kinase (inverted repreat (ir)CCaMK) were grown competitively in pairs with empty vector (EV) plants, with and without two different types of inoculum. When inoculated, EV plants strongly outperformed irCCaMK plants. Foliar transcript profiling revealed that AMF colonization significantly changed gene expression of P-starvation and -transporter genes in irCCaMK plants. The Pht1 family phosphate transporter NaPT5 was not only specifically induced in roots after AMF colonization, but also in leaves of AMF-colonized irCCaMK plants, and in plants grown under low Pi conditions in the absence of AMF. The P-starvation signature of inoculated irCCaMK plants corresponded with increases in selected amino acids and phenolic compounds in leaves. We also found a strong AMF-induced increase in amino acids and phenolic metabolites in roots. Plants impaired in their interactions with AMF clearly have a fitness disadvantage when competing for limited soil nutrients with a fully functional isogenic line. The additional role of the AMF-induced Pht1 family transporter NaPT5 in leaves under P-starvation conditions will require further experiments to fully resolve.
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Affiliation(s)
- Ming Wang
- Department of Molecular Ecology, Max Planck Institute for Chemical Ecology, Hans-Knöll-Str. 8, Jena 07745, Germany
| | - Julia Wilde
- Department of Molecular Ecology, Max Planck Institute for Chemical Ecology, Hans-Knöll-Str. 8, Jena 07745, Germany
| | - Ian T Baldwin
- Department of Molecular Ecology, Max Planck Institute for Chemical Ecology, Hans-Knöll-Str. 8, Jena 07745, Germany
| | - Karin Groten
- Department of Molecular Ecology, Max Planck Institute for Chemical Ecology, Hans-Knöll-Str. 8, Jena 07745, Germany
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Hill EM, Robinson LA, Abdul-Sada A, Vanbergen AJ, Hodge A, Hartley SE. Arbuscular Mycorrhizal Fungi and Plant Chemical Defence: Effects of Colonisation on Aboveground and Belowground Metabolomes. J Chem Ecol 2018; 44:198-208. [PMID: 29392532 PMCID: PMC5843688 DOI: 10.1007/s10886-017-0921-1] [Citation(s) in RCA: 48] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/26/2017] [Revised: 12/08/2017] [Accepted: 12/25/2017] [Indexed: 12/01/2022]
Abstract
Arbuscular mycorrhizal fungal (AMF) colonisation of plant roots is one of the most ancient and widespread interactions in ecology, yet the systemic consequences for plant secondary chemistry remain unclear. We performed the first metabolomic investigation into the impact of AMF colonisation by Rhizophagus irregularis on the chemical defences, spanning above- and below-ground tissues, in its host-plant ragwort (Senecio jacobaea). We used a non-targeted metabolomics approach to profile, and where possible identify, compounds induced by AMF colonisation in both roots and shoots. Metabolomics analyses revealed that 33 compounds were significantly increased in the root tissue of AMF colonised plants, including seven blumenols, plant-derived compounds known to be associated with AMF colonisation. One of these was a novel structure conjugated with a malonyl-sugar and uronic acid moiety, hitherto an unreported combination. Such structural modifications of blumenols could be significant for their previously reported functional roles associated with the establishment and maintenance of AM colonisation. Pyrrolizidine alkaloids (PAs), key anti-herbivore defence compounds in ragwort, dominated the metabolomic profiles of root and shoot extracts. Analyses of the metabolomic profiles revealed an increase in four PAs in roots (but not shoots) of AMF colonised plants, with the potential to protect colonised plants from below-ground organisms.
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Affiliation(s)
- Elizabeth M Hill
- School of Life Sciences, University of Sussex, Brighton, BN1 9QG, UK
| | - Lynne A Robinson
- School of Life Sciences, University of Sussex, Brighton, BN1 9QG, UK
- Centre for Ecology and Hydrology (CEH), Bush Estate, Penicuik, Midlothian, EH26 0QB, UK
| | - Ali Abdul-Sada
- School of Life Sciences, University of Sussex, Brighton, BN1 9QG, UK
| | - Adam J Vanbergen
- Centre for Ecology and Hydrology (CEH), Bush Estate, Penicuik, Midlothian, EH26 0QB, UK
| | - Angela Hodge
- Department of Biology, University of York, Wentworth Way, York, YO10 5DD, UK
| | - Sue E Hartley
- Department of Biology, University of York, Wentworth Way, York, YO10 5DD, UK.
- York Environment and Sustainability Institute, Department of Biology, University of York, Wentworth Way, York, YO10 5DD, UK.
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49
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Vangelisti A, Natali L, Bernardi R, Sbrana C, Turrini A, Hassani-Pak K, Hughes D, Cavallini A, Giovannetti M, Giordani T. Transcriptome changes induced by arbuscular mycorrhizal fungi in sunflower (Helianthus annuus L.) roots. Sci Rep 2018; 8:4. [PMID: 29311719 PMCID: PMC5758643 DOI: 10.1038/s41598-017-18445-0] [Citation(s) in RCA: 69] [Impact Index Per Article: 11.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/08/2017] [Accepted: 12/08/2017] [Indexed: 01/11/2023] Open
Abstract
Arbuscular mycorrhizal (AM) fungi are essential elements of soil fertility, plant nutrition and productivity, facilitating soil mineral nutrient uptake. Helianthus annuus is a non-model, widely cultivated species. Here we used an RNA-seq approach for evaluating gene expression variation at early and late stages of mycorrhizal establishment in sunflower roots colonized by the arbuscular fungus Rhizoglomus irregulare. mRNA was isolated from roots of plantlets at 4 and 16 days after inoculation with the fungus. cDNA libraries were built and sequenced with Illumina technology. Differential expression analysis was performed between control and inoculated plants. Overall 726 differentially expressed genes (DEGs) between inoculated and control plants were retrieved. The number of up-regulated DEGs greatly exceeded the number of down-regulated DEGs and this difference increased in later stages of colonization. Several DEGs were specifically involved in known mycorrhizal processes, such as membrane transport, cell wall shaping, and other. We also found previously unidentified mycorrhizal-induced transcripts. The most important DEGs were carefully described in order to hypothesize their roles in AM symbiosis. Our data add a valuable contribution for deciphering biological processes related to beneficial fungi and plant symbiosis, adding an Asteraceae, non-model species for future comparative functional genomics studies.
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Affiliation(s)
- Alberto Vangelisti
- Department of Agriculture, Food, and Environment, University of Pisa, Via del Borghetto 80, I-56124, Pisa, Italy
| | - Lucia Natali
- Department of Agriculture, Food, and Environment, University of Pisa, Via del Borghetto 80, I-56124, Pisa, Italy
| | - Rodolfo Bernardi
- Department of Agriculture, Food, and Environment, University of Pisa, Via del Borghetto 80, I-56124, Pisa, Italy
| | - Cristiana Sbrana
- CNR, Institute of Agricultural Biology and Biotechnology UOS Pisa, Pisa, Italy
| | - Alessandra Turrini
- Department of Agriculture, Food, and Environment, University of Pisa, Via del Borghetto 80, I-56124, Pisa, Italy
| | | | - David Hughes
- Rothamsted Research, Harpenden, Hertfordshire, AL5 2JQ, UK
| | - Andrea Cavallini
- Department of Agriculture, Food, and Environment, University of Pisa, Via del Borghetto 80, I-56124, Pisa, Italy
| | - Manuela Giovannetti
- Department of Agriculture, Food, and Environment, University of Pisa, Via del Borghetto 80, I-56124, Pisa, Italy
| | - Tommaso Giordani
- Department of Agriculture, Food, and Environment, University of Pisa, Via del Borghetto 80, I-56124, Pisa, Italy.
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Stauder R, Welsch R, Camagna M, Kohlen W, Balcke GU, Tissier A, Walter MH. Strigolactone Levels in Dicot Roots Are Determined by an Ancestral Symbiosis-Regulated Clade of the PHYTOENE SYNTHASE Gene Family. FRONTIERS IN PLANT SCIENCE 2018; 9:255. [PMID: 29545815 PMCID: PMC5838088 DOI: 10.3389/fpls.2018.00255] [Citation(s) in RCA: 22] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/27/2017] [Accepted: 02/12/2018] [Indexed: 05/20/2023]
Abstract
Strigolactones (SLs) are apocarotenoid phytohormones synthesized from carotenoid precursors. They are produced most abundantly in roots for exudation into the rhizosphere to cope with mineral nutrient starvation through support of root symbionts. Abscisic acid (ABA) is another apocarotenoid phytohormone synthesized in roots, which is involved in responses to abiotic stress. Typically low carotenoid levels in roots raise the issue of precursor supply for the biosynthesis of these two apocarotenoids in this organ. Increased ABA levels upon abiotic stress in Poaceae roots are known to be supported by a particular isoform of phytoene synthase (PSY), catalyzing the rate-limiting step in carotenogenesis. Here we report on novel PSY3 isogenes from Medicago truncatula (MtPSY3) and Solanum lycopersicum (SlPSY3) strongly expressed exclusively upon root interaction with symbiotic arbuscular mycorrhizal (AM) fungi and moderately in response to phosphate starvation. They belong to a widespread clade of conserved PSYs restricted to dicots (dPSY3) distinct from the Poaceae-PSY3s involved in ABA formation. An ancient origin of dPSY3s and a potential co-evolution with the AM symbiosis is discussed in the context of PSY evolution. Knockdown of MtPSY3 in hairy roots of M. truncatula strongly reduced SL and AM-induced C13 α-ionol/C14 mycorradicin apocarotenoids. Inhibition of the reaction subsequent to phytoene synthesis revealed strongly elevated levels of phytoene indicating induced flux through the carotenoid pathway in roots upon mycorrhization. dPSY3 isogenes are coregulated with upstream isogenes and downstream carotenoid cleavage steps toward SLs (D27, CCD7, CCD8) suggesting a combined carotenoid/apocarotenoid pathway, which provides "just in time"-delivery of precursors for apocarotenoid formation.
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Affiliation(s)
- Ron Stauder
- Department of Cell and Metabolic Biology, Leibniz-Institute of Plant Biochemistry, Halle, Germany
| | - Ralf Welsch
- Institute of Biology II, Faculty of Biology, University of Freiburg, Freiburg, Germany
| | - Maurizio Camagna
- Institute of Biology II, Faculty of Biology, University of Freiburg, Freiburg, Germany
| | - Wouter Kohlen
- Laboratory of Molecular Biology, Department of Plant Sciences, Wageningen University, Wageningen, Netherlands
| | - Gerd U. Balcke
- Department of Cell and Metabolic Biology, Leibniz-Institute of Plant Biochemistry, Halle, Germany
| | - Alain Tissier
- Department of Cell and Metabolic Biology, Leibniz-Institute of Plant Biochemistry, Halle, Germany
| | - Michael H. Walter
- Department of Cell and Metabolic Biology, Leibniz-Institute of Plant Biochemistry, Halle, Germany
- *Correspondence: Michael H. Walter,
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