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Liu Y, Delgado-Baquerizo M, Bing H, Wang Y, Wang J, Chen J, Qiu S, Zhu H, Wu Y, Fang L, Chang R. Warming-induced shifts in alpine soil microbiome: An ecosystem-scale study with environmental context-dependent insights. ENVIRONMENTAL RESEARCH 2024; 255:119206. [PMID: 38782346 DOI: 10.1016/j.envres.2024.119206] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/29/2024] [Revised: 05/17/2024] [Accepted: 05/20/2024] [Indexed: 05/25/2024]
Abstract
Climate warming is a pressing global issue with substantial impacts on soil health and function. However, the influence of environmental context on the responses of soil microorganisms to warming remains largely elusive, particularly in alpine ecosystems. This study examined the responses of the soil microbiome to in situ experimental warming across three elevations (3850 m, 4100 m, and 4250 m) in the meadow of Gongga Mountain, eastern Tibetan Plateau. Our findings demonstrate that soil microbial diversity is highly resilient to warming, with significant impacts observed only at specific elevations. Furthermore, the influence of warming on the composition of the soil microbial community is also elevation-dependent, underscoring the importance of local environmental context in shaping microbial evolution in alpine soils under climate warming. Notably, we identified soil moisture at 3850 m and carbon-to-nitrogen ratio at 4250 m as indirect predictors regulating the responses of microbial diversity to warming at specific elevations. These findings underscore the paramount importance of considering pre-existing environmental conditions in predicting the response of alpine soil microbiomes to climate warming. Our study provides novel insights into the intricate interactions between climate warming, soil microbiome, and environmental context in alpine ecosystems, illuminating the complex mechanisms governing soil microbial ecology in these fragile and sensitive environments.
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Affiliation(s)
- Ye Liu
- Institute of Mountain Hazards and Environment, Chinese Academy of Sciences, Chengdu, 610299, China
| | - Manuel Delgado-Baquerizo
- Laboratorio de Biodiversidad y Funcionamiento Ecosistémico, Institutode Recursos Naturales y Agrobiología de Sevilla (IRNAS), CSIC, Sevilla, Spain
| | - Haijian Bing
- Institute of Mountain Hazards and Environment, Chinese Academy of Sciences, Chengdu, 610299, China.
| | - Yuhan Wang
- Institute of Mountain Hazards and Environment, Chinese Academy of Sciences, Chengdu, 610299, China; Key Laboratory of Green Utilization of Critical Non-Metallic Mineral Resources, Ministry of Education, Wuhan University of Technology, Wuhan, 430070, China
| | - Jianjun Wang
- State Key Laboratory of Lake Science and Environment, Nanjing Institute of Geography and Limnology, Chinese Academic of Sciences, Nanjing, 210008, China
| | - Ji Chen
- State Key Laboratory of Loess and Quaternary Geology, Institute of Earth Environment, Chinese Academy of Sciences, Xi'an, 710061, China
| | - Shaojun Qiu
- Institute of Mountain Hazards and Environment, Chinese Academy of Sciences, Chengdu, 610299, China
| | - He Zhu
- Institute of Mountain Hazards and Environment, Chinese Academy of Sciences, Chengdu, 610299, China
| | - Yanhong Wu
- Institute of Mountain Hazards and Environment, Chinese Academy of Sciences, Chengdu, 610299, China
| | - Linchuan Fang
- Key Laboratory of Green Utilization of Critical Non-Metallic Mineral Resources, Ministry of Education, Wuhan University of Technology, Wuhan, 430070, China
| | - Ruiying Chang
- Institute of Mountain Hazards and Environment, Chinese Academy of Sciences, Chengdu, 610299, China
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Koltz AM, Koyama A, Wallenstein M. Warming alters cascading effects of a dominant arthropod predator on fungal community composition in the Arctic. mBio 2024; 15:e0059024. [PMID: 38832779 PMCID: PMC11253614 DOI: 10.1128/mbio.00590-24] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/27/2024] [Accepted: 04/30/2024] [Indexed: 06/05/2024] Open
Abstract
Rapid climate change in the Arctic is altering microbial structure and function, with important consequences for the global ecosystem. Emerging evidence suggests organisms in higher trophic levels may also influence microbial communities, but whether warming alters these effects is unclear. Wolf spiders are dominant Arctic predators whose densities are expected to increase with warming. These predators have temperature-dependent effects on decomposition via their consumption of fungal-feeding detritivores, suggesting they may indirectly affect the microbial structure as well. To address this, we used a fully factorial mesocosm experiment to test the effects of wolf spider density and warming on litter microbial structure in Arctic tundra. We deployed replicate litter bags at the surface and belowground in the organic soil profile and analyzed the litter for bacterial and fungal community structure, mass loss, and nutrient characteristics after 2 and 14 months. We found there were significant interactive effects of wolf spider density and warming on fungal but not bacterial communities. Specifically, higher wolf spider densities caused greater fungal diversity under ambient temperature but lower fungal diversity under warming at the soil surface. We also observed interactive treatment effects on fungal composition belowground. Wolf spider density influenced surface bacterial composition, but the effects did not change with warming. These findings suggest a widespread predator can have indirect, cascading effects on litter microbes and that effects on fungi specifically shift under future expected levels of warming. Overall, our study highlights that trophic interactions may play important, albeit overlooked, roles in driving microbial responses to warming in Arctic terrestrial ecosystems. IMPORTANCE The Arctic contains nearly half of the global pool of soil organic carbon and is one of the fastest warming regions on the planet. Accelerated decomposition of soil organic carbon due to warming could cause positive feedbacks to climate change through increased greenhouse gas emissions; thus, changes in ecological dynamics in this region are of global relevance. Microbial structure is an important driver of decomposition and is affected by both abiotic and biotic conditions. Yet how activities of soil-dwelling organisms in higher trophic levels influence microbial structure and function is unclear. In this study, we demonstrate that predicted changes in abundances of a dominant predator and warming interactively affect the structure of litter-dwelling fungal communities in the Arctic. These findings suggest predators may have widespread, indirect cascading effects on microbial communities, which could influence ecosystem responses to future climate change.
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Affiliation(s)
- Amanda M. Koltz
- Department of Integrative Biology, University of Texas at Austin, Austin, Texas, USA
| | - Akihiro Koyama
- Department of Forestry, Michigan State University, East Lasing, Michigan, USA
| | - Matthew Wallenstein
- Department of Soil and Crop Sciences, Colorado State University, Fort Collins, Colorado, USA
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Li X, Li Q, Duan Y, Sun H, Chu H, Jia S, Chen H, Tang W. Soil fungal communities varied across aspects of restored grassland in former mining areas of the Qinghai-Tibet Plateau. PLoS One 2024; 19:e0295019. [PMID: 38530822 DOI: 10.1371/journal.pone.0295019] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/06/2023] [Accepted: 11/14/2023] [Indexed: 03/28/2024] Open
Abstract
To determine whether different aspects lead to a heterogeneous distribution of soil fungi, we investigated artificially established alpine grasslands in the Muli mining area in the Qinghai-Tibet Plateau. Employing high-throughput sequencing techniques, we analyzed the composition, diversity, and function of soil fungal communities across various aspects (flat, East-facing, South-facing, West-facing, North-facing). We also examined their relationships with environmental factors. Soil fungal communities of restored alpine grasslands differed significantly across aspects in terms of the dominant phyla, classes and species level. Compared with No aspect, the Shannon index of fungi respectively decreased by 2.99%, 19.32%, 19.37% and 10.56% for East aspect, South aspect, West aspect and North aspect, respectively, and the Chao1 index of fungi respectively decreased by-2.44%, 35.50%, 42.15% and 3.21%, respectively. A total of 22 different types of fungi were identified in the study area. Predictive analysis, based on PICRUSt2, indicated that the primary functions of the fungal communities across different aspects were aerobic respiration I (cytochrome c) and aerobic respiration II (cytochrome c). Among the environmental variables, total phosphorus (P) and total nitrogen (N) were the principal factors influencing the fungal community composition.In conclusion, aspect plays a significant role in shaping the composition of fungal communities and also affects their overall diversity.
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Affiliation(s)
- Xiaoqing Li
- College of Agriculture and Animal Husbandry, Qinghai University, Xining, China
| | - Qiang Li
- College of Agriculture and Animal Husbandry, Qinghai University, Xining, China
| | - Yinzhu Duan
- Qinghai Province Grassland Improvement Experiment Station, Xining, China
| | - Haiqun Sun
- College of Agriculture and Animal Husbandry, Qinghai University, Xining, China
| | - Hui Chu
- College of Agriculture and Animal Husbandry, Qinghai University, Xining, China
| | - Shunbin Jia
- Qinghai Province Grassland Technology and Extension Station, Xining, China
| | - Hongjie Chen
- Tongyu County Animal Quarantine Station, Baicheng, China
| | - Wenxi Tang
- College of Agriculture and Animal Husbandry, Qinghai University, Xining, China
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Niu B, Fu G. Response of plant diversity and soil microbial diversity to warming and increased precipitation in alpine grasslands on the Qinghai-Xizang Plateau - A review. THE SCIENCE OF THE TOTAL ENVIRONMENT 2024; 912:168878. [PMID: 38029973 DOI: 10.1016/j.scitotenv.2023.168878] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/19/2023] [Revised: 11/15/2023] [Accepted: 11/23/2023] [Indexed: 12/01/2023]
Abstract
Plant diversity and soil microbial diversity are closely related, and they maintain the health and stability of terrestrial ecosystems. As a hotspot region of global biodiversity research, both air temperature and precipitation of the Qinghai-Xizang Plateau tend to increase in future. Based on an overview of the responses of grassland/alpine ecosystems to seasonal asymmetric warming and increased precipitation worldwide, we elaborated the advancements and uncertainties on the responses of plant diversity and soil microbial diversity to warming and increased precipitation in alpine grasslands on the Qinghai-Xizang Plateau. The future research focus of plant diversity and soil microbial diversity in the alpine grasslands of the Qinghai-Xizang Plateau under climate warming and increased precipitation was proposed. Generally, previous studies found that the responses of plant species diversity and soil microbial species diversity to warming and increased precipitation differed between alpine meadows and alpine steppes, but few studies focused on their responses to warming and increased precipitation in alpine desert steppes. Previous studies mainly focused on species diversity, although phylogenetic and functional diversities are also important aspects of biodiversity. Previous studies mainly explained responses of plant diversity and soil microbial diversity to warming and increased precipitation based on niche theory, although neutral theory is also the other important mechanism in regulating biodiversity. Moreover, previous studies almost ignored the coupling relationship between plant diversity and soil microbial diversity. Therefore, the following four aspects need to be strengthened, including the responses of plant diversity and soil microbial diversity to warming and increased precipitation in alpine desert steppes, the responses of plant and soil microbial phylogenetic diversity and functional diversity to warming and increased precipitation, combining the niche theory and neutral theory to examining the mechanism of biodiversity, and the coupling relationships between plant diversity and soil microbial diversity under warming and increased precipitation.
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Affiliation(s)
- Ben Niu
- Lhasa Plateau Ecosystem Research Station, Key Laboratory of Ecosystem Network Observation and Modeling, Institute of Geographic Sciences and Natural Resources Research, Chinese Academy of Sciences, Beijing 100101, China
| | - Gang Fu
- Lhasa Plateau Ecosystem Research Station, Key Laboratory of Ecosystem Network Observation and Modeling, Institute of Geographic Sciences and Natural Resources Research, Chinese Academy of Sciences, Beijing 100101, China.
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Zhao J, Xie X, Jiang Y, Li J, Fu Q, Qiu Y, Fu X, Yao Z, Dai Z, Qiu Y, Chen H. Effects of simulated warming on soil microbial community diversity and composition across diverse ecosystems. THE SCIENCE OF THE TOTAL ENVIRONMENT 2024; 911:168793. [PMID: 37996030 DOI: 10.1016/j.scitotenv.2023.168793] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/27/2023] [Revised: 11/20/2023] [Accepted: 11/20/2023] [Indexed: 11/25/2023]
Abstract
Soil warming can directly affect the microbial community, or indirectly affect the microbial community by affecting soil moisture, nutrient availability, vegetation growth, etc. However, the response of microorganisms to soil warming is complex, and there is no uniform conclusion on the impact and mechanism of warming on microbial diversity. As the global climate gradually warms, a comprehensive assessment of warming on soil microbial community changes is essential to understand and predict the response of microbial geochemical processes to soil warming. Here, we perform a meta-analysis of studies to investigate changes in soil microbial communities along soil warming gradients and the response of soil microbes to elevated temperature in different ecosystems. We found that the α diversity index of soil microorganisms decreased significantly with the increase in temperature, and the β diversity altered with the increase in soil temperature and the shifts in ecosystem. Most bacteria only alter when the temperature rises higher. Compared to the non-warming condition, the relative abundance of Acidobacteria, Proteobacteria, Bacteroidetes, Planctomycetes and Verrucomicrobia decreased by 19 %, 11 %, 19 %, 8 % and 6 %, respectively, and the relative abundance of Firmicutes increased by 34 %. Compared to farmland, forest, grassland and tundra ecosystems, soil microorganisms in wetland ecosystems were more sensitive to temperature increase, and the changes in bacteria were consistent with the overall alterations. This meta-analysis revealed significant changes in the composition of microbial communities on soil warming. With the decrease in biodiversity under increasing temperature conditions, these dominant microbiomes, which can grow well under high-temperature conditions, will play a stronger role in regulating nutrient and energy flow. Our analysis adds a global perspective to the temperature response of soil microbes, which is critical to improving our understanding of the mechanisms of how soil microbes change in response to climate warming.
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Affiliation(s)
- Jiayi Zhao
- State Key Laboratory of Biocontrol, School of Ecology, Shenzhen Campus of Sun Yat-sen University, Shenzhen, Guangdong 518107, China
| | - Xuan Xie
- State Key Laboratory of Biocontrol, School of Ecology, Shenzhen Campus of Sun Yat-sen University, Shenzhen, Guangdong 518107, China
| | - Yuying Jiang
- State Key Laboratory of Biocontrol, School of Ecology, Shenzhen Campus of Sun Yat-sen University, Shenzhen, Guangdong 518107, China
| | - Jiaxin Li
- State Key Laboratory of Biocontrol, School of Ecology, Shenzhen Campus of Sun Yat-sen University, Shenzhen, Guangdong 518107, China
| | - Qi Fu
- State Key Laboratory of Biocontrol, School of Ecology, Shenzhen Campus of Sun Yat-sen University, Shenzhen, Guangdong 518107, China
| | - Yingbo Qiu
- State Key Laboratory of Biocontrol, School of Ecology, Shenzhen Campus of Sun Yat-sen University, Shenzhen, Guangdong 518107, China
| | - Xianheng Fu
- State Key Laboratory of Biocontrol, School of Ecology, Shenzhen Campus of Sun Yat-sen University, Shenzhen, Guangdong 518107, China
| | - Zhiyuan Yao
- School of Civil and Environmental Engineering, Ningbo University, Ningbo, Zhejiang 315211, China
| | - Zhongmin Dai
- Institute of Soil and Water Resources and Environmental Science, College of Environmental and Resource Sciences, Zhejiang University, Hangzhou, Zhejiang 310058, China
| | - Yunpeng Qiu
- College of Resources and Environmental Sciences, Nanjing Agricultural University, Nanjing, Jiangsu 210095, China
| | - Huaihai Chen
- State Key Laboratory of Biocontrol, School of Ecology, Shenzhen Campus of Sun Yat-sen University, Shenzhen, Guangdong 518107, China.
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Li Y, Yang H, Su Y, Gong X, Yao B, Cheng L. Phosphorus Coupled with High Nitrogen Addition Exerts a Great Influence on Soil Bacterial Community in a Semiarid Grassland. MICROBIAL ECOLOGY 2023; 86:2993-3002. [PMID: 37712979 DOI: 10.1007/s00248-023-02297-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/15/2023] [Accepted: 08/29/2023] [Indexed: 09/16/2023]
Abstract
Nitrogen (N) and phosphorus (P) addition, either individually or in combination, has been demonstrated to enhance plant productivity in grassland ecosystems. Soil bacterial community, which is the driver of litter decomposition and nutrient cycling, is assumed to control responses of terrestrial ecosystem structure and function to N and P addition. Using a high-throughput Illumina MiSeq sequencing platform, we conducted a 9-year field experiment of N (0, 5, 10, and 20 g N m-2 yr-1) and P (0 and 10 g P m-2 yr-1) additions in the Inner Mongolian steppes to elucidate long-term effects of N and P addition on soil bacterial richness, diversity and composition. We found that N addition reduced the relative abundance of Acidobacteria, Chloroflexi, and Nitrospirae, while increased that of Bacteroides. The results showed that the bacterial biomarker was enriched in P addition treatments, either individually or combined with N addition. Both N and P addition altered the bacterial community structure, while only N addition greatly decreased bacterial richness and diversity. More importantly, we showed that all of these effects were most significant in N3P treatment (20 g N m-2 yr-1 and 10 g P m-2 yr-1), implying that P coupled with a high-level N addition exerted a great influence on soil bacterial community. Structural equation models revealed that N and P addition had a great direct effect on soil bacterial community and an indirect effect on it mainly by changing the litter biomass. Our findings highlighted that severe niche differentiation was induced by P along with a high-level N, further emphasizing the importance of simultaneously evaluating response of soil bacterial community to N and P addition, especially in the context of increasing anthropogenic nutrient additions.
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Affiliation(s)
- Yulin Li
- Northwest Institute of Eco-Environment and Resources, Chinese Academy of Sciences, Lanzhou, 730000, China.
- Naiman Desertification Research Station, Northwest Institute of Eco-Environment and Resources, Chinese Academy of Sciences, Tongliao, 028300, China.
| | - Hongling Yang
- Northwest Institute of Eco-Environment and Resources, Chinese Academy of Sciences, Lanzhou, 730000, China.
- Naiman Desertification Research Station, Northwest Institute of Eco-Environment and Resources, Chinese Academy of Sciences, Tongliao, 028300, China.
| | - Yongzhong Su
- Northwest Institute of Eco-Environment and Resources, Chinese Academy of Sciences, Lanzhou, 730000, China
- Naiman Desertification Research Station, Northwest Institute of Eco-Environment and Resources, Chinese Academy of Sciences, Tongliao, 028300, China
| | - Xiangwen Gong
- Northwest Institute of Eco-Environment and Resources, Chinese Academy of Sciences, Lanzhou, 730000, China
| | - Bo Yao
- Northwest Institute of Eco-Environment and Resources, Chinese Academy of Sciences, Lanzhou, 730000, China
- Naiman Desertification Research Station, Northwest Institute of Eco-Environment and Resources, Chinese Academy of Sciences, Tongliao, 028300, China
| | - Li Cheng
- Northwest Institute of Eco-Environment and Resources, Chinese Academy of Sciences, Lanzhou, 730000, China
- Naiman Desertification Research Station, Northwest Institute of Eco-Environment and Resources, Chinese Academy of Sciences, Tongliao, 028300, China
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Xiao J, Yu C, Fu G. Response of Aboveground Net Primary Production, Species and Phylogenetic Diversity to Warming and Increased Precipitation in an Alpine Meadow. PLANTS (BASEL, SWITZERLAND) 2023; 12:3017. [PMID: 37687264 PMCID: PMC10490440 DOI: 10.3390/plants12173017] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/22/2023] [Revised: 08/10/2023] [Accepted: 08/18/2023] [Indexed: 09/10/2023]
Abstract
The uncertain responses of aboveground net primary productivity (ANPP) and plant diversity to climate warming and increased precipitation will limit our ability to predict changes in vegetation productivity and plant diversity under future climate change and further constrain our ability to protect biodiversity and ecosystems. A long-term experiment was conducted to explore the responses of ANPP, plant species, phylogenetic α-diversity, and community composition to warming and increased precipitation in an alpine meadow of the Northern Tibet from 2014 to 2019. Coverage, height, and species name were obtained by conventional community investigation methods, and ANPP was obtained using observed height and coverage. Open-top chambers with two different heights were used to simulate low- and high-level climate warming. The low- and high-level increased precipitation treatments were achieved by using two kinds of surface area funnel devices. The high-level warming reduced sedge ANPP (ANPPsedge) by 62.81%, species richness (SR) by 21.05%, Shannon by 13.06%, and phylogenetic diversity (PD) by 14.48%, but increased forb ANPP (ANPPforb) by 56.65% and mean nearest taxon distance (MNTD) by 33.88%. Species richness, Shannon, and PD of the high-level warming were 19.64%, 9.67%, and 14.66% lower than those of the low-level warming, respectively. The high-level warming-induced dissimilarity magnitudes of species and phylogenetic composition were greater than those caused by low-level warming. The low- rather than high-level increased precipitation altered species and phylogenetic composition. There were significant inter-annual variations of ANPP, plant species, phylogenetic α-diversity and community composition. Therefore, climate warming and increased precipitation had non-linear effects on ANPP and plant diversity, which were due to non-linear changes in temperature, water availability, and/or soil nutrition caused by warming and increased precipitation. The inter-annual variations of ANPP and plant diversity were stronger than the effects of warming and especially increased precipitation on ANPP and plant diversity. In terms of plant diversity conservation and related policy formulation, we should pay more attention to regions with greater warming, at least for the northern Tibet grasslands. Besides paying attention to the responses of ANPP and plant diversity to climate change, the large inter-annual changes of ANPP and plant diversity should be given great attention because the large inter-annual variation indicates the low temporal stability of ANPP and plant diversity and thus produces great uncertainty for the development of animal husbandry.
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Affiliation(s)
- Jianyu Xiao
- Lhasa Plateau Ecosystem Research Station, Key Laboratory of Ecosystem Network Observation and Modeling, Institute of Geographic Sciences and Natural Resources Research, Chinese Academy of Sciences, Beijing 100101, China; (J.X.); (C.Y.)
- University of Chinese Academy of Sciences, Beijing 100049, China
| | - Chengqun Yu
- Lhasa Plateau Ecosystem Research Station, Key Laboratory of Ecosystem Network Observation and Modeling, Institute of Geographic Sciences and Natural Resources Research, Chinese Academy of Sciences, Beijing 100101, China; (J.X.); (C.Y.)
| | - Gang Fu
- Lhasa Plateau Ecosystem Research Station, Key Laboratory of Ecosystem Network Observation and Modeling, Institute of Geographic Sciences and Natural Resources Research, Chinese Academy of Sciences, Beijing 100101, China; (J.X.); (C.Y.)
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Huang S, Zha X, Fu G. Affecting Factors of Plant Phyllosphere Microbial Community and Their Responses to Climatic Warming-A Review. PLANTS (BASEL, SWITZERLAND) 2023; 12:2891. [PMID: 37631103 PMCID: PMC10458011 DOI: 10.3390/plants12162891] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/01/2023] [Revised: 08/02/2023] [Accepted: 08/06/2023] [Indexed: 08/27/2023]
Abstract
Phyllosphere microorganisms are not only an important part of plants, but also an important part of microorganisms. In this review, the function of phyllosphere microorganisms, the assembly mechanism of phyllosphere microorganisms, the driving factors of phyllosphere microbial community structure, and the effects of climate warming on phyllosphere microbial community structure were reviewed. Generally, phyllosphere microorganisms have a variety of functions (e.g., fixing nitrogen, promoting plant growth). Although selection and dispersal processes together regulate the assembly of phyllospheric microbial communities, which one of the ecological processes is dominant and how external disturbances alter the relative contributions of each ecological process remains controversial. Abiotic factors (e.g., climatic conditions, geographical location and physical and chemical properties of soil) and biological factors (e.g., phyllosphere morphological structure, physiological and biochemical characteristics, and plant species and varieties) can affect phyllosphere microbial community structure. However, the predominant factors affecting phyllosphere microbial community structure are controversial. Moreover, how climate warming affects the phyllosphere microbial community structure and its driving mechanism have not been fully resolved, and further relevant studies are needed.
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Affiliation(s)
- Shaolin Huang
- Lhasa Plateau Ecosystem Research Station, Key Laboratory of Ecosystem Network Observation and Modeling, Institute of Geographic Sciences and Natural Resources Research, Chinese Academy of Sciences, Beijing 100101, China;
| | - Xinjie Zha
- Xi’an University of Finance and Economics, Xi’an 710100, China;
| | - Gang Fu
- Lhasa Plateau Ecosystem Research Station, Key Laboratory of Ecosystem Network Observation and Modeling, Institute of Geographic Sciences and Natural Resources Research, Chinese Academy of Sciences, Beijing 100101, China;
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Hou Z, Sun Z, Du G, Shao D, Zhong Q, Yang S. Assessment of suitable cultivation region for Pepino ( Solanum muricatum) under different climatic conditions using the MaxEnt model and adaptability in the Qinghai-Tibet plateau. Heliyon 2023; 9:e18974. [PMID: 37636388 PMCID: PMC10448078 DOI: 10.1016/j.heliyon.2023.e18974] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/07/2022] [Revised: 07/28/2023] [Accepted: 08/03/2023] [Indexed: 08/29/2023] Open
Abstract
Pepino (Solanum muricatum), a member of the Solanaceae family originating from South America, is cultivated globally. However, the cultivation range and suitable habitat of Pepino have not been extensively studied, which hampers the further development of its cultivation industry. Therefore, we aimed at enrich and expand the planting scope of Pepino. Currently, the main cultivation areas of Pepino in China are the Yunnan-Guizhou Plateau and the Loess Plateau, where the altitude is above 1000 m. In this study, ArcGIS combined with the MaxEnt model was used for prediction, whose area under curve value was 0.949. The main climatic factors affecting the distribution of Pepino are temperature seasonality, annual means temperature, mean temperature of the coldest quarter, elevation, isothermality, and the climate factors, and their cumulative contribution rate of 87.6%. Pepino's main potential distribution areas are located in Yunnan-Guizhou Plateau, Yunnan Province, Hexi Corridor of Loess Plateau, and low altitude areas of Qinghai-Tibet Plateau. The main distribution ranges from 1000 to 2000 m above sea level, and the total suitable area accounts for 20.09% of China's total land area. The prediction results reveal an expanded potential area for Pepino, with no significant migration in the central region of the main potential distribution area by 2050 and 2070. No studies have been conducted on the open-area cultivation of Pepino in northern China. Our findings revealed that the yield and quality in the four experimental sites and final actual cultivation conditions were consistent with the predicted results of MaxEnt. The yiel d per plant in Xunhua and Minhe was significantly different from that in Xining, which was low, and that in Minhe was the highest. Overall, the fruit quality in the Xining region was the lowest among the three regions, which was related to the climatic differences in each region. These results align with the predicted outcomes, indicating that Xining is the least suitable area. Further, these data verify the accuracy of the prediction results. The climate data of the four regions were analyzed simultaneously to elucidate the influence of different climate conditions on the growth of Pepino. Our findings are of considerable significance for introducing characteristic horticultural crops in the Qinghai-Tibet Plateau and using the MaxEnt model to predict the cultivation range of crops.
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Affiliation(s)
- Zhichao Hou
- Qinghai Key Laboratory of Vegetable Genetics and Physiology, Agriculture and Forestry Sciences Institute of Qinghai University, Xining, PR China
| | - Zhu Sun
- Qinghai Key Laboratory of Vegetable Genetics and Physiology, Agriculture and Forestry Sciences Institute of Qinghai University, Xining, PR China
| | - Guolian Du
- Qinghai Key Laboratory of Vegetable Genetics and Physiology, Agriculture and Forestry Sciences Institute of Qinghai University, Xining, PR China
| | - Dengkui Shao
- Qinghai Key Laboratory of Vegetable Genetics and Physiology, Agriculture and Forestry Sciences Institute of Qinghai University, Xining, PR China
| | - Qiwen Zhong
- Qinghai Key Laboratory of Vegetable Genetics and Physiology, Agriculture and Forestry Sciences Institute of Qinghai University, Xining, PR China
- Laboratory for Research and Utilization of Germplasm Resources in Qinghai Tibet Plateau, Xining, PR China
| | - Shipeng Yang
- Qinghai Key Laboratory of Vegetable Genetics and Physiology, Agriculture and Forestry Sciences Institute of Qinghai University, Xining, PR China
- Laboratory for Research and Utilization of Germplasm Resources in Qinghai Tibet Plateau, Xining, PR China
- College of Life Sciences, Northwest A&F University, Yangling, PR China
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10
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Jiang M, Tian Y, Guo R, Li S, Guo J, Zhang T. Effects of warming and nitrogen addition on soil fungal and bacterial community structures in a temperate meadow. Front Microbiol 2023; 14:1231442. [PMID: 37502394 PMCID: PMC10369075 DOI: 10.3389/fmicb.2023.1231442] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/30/2023] [Accepted: 06/26/2023] [Indexed: 07/29/2023] Open
Abstract
Soil microbial communities have been influenced by global changes, which might negatively regulate aboveground communities and affect nutrient resource cycling. However, the influence of warming and nitrogen (N) addition and their combined effects on soil microbial community composition and structure are still not well understood. To explore the effect of warming and N addition on the composition and structure of soil microbial communities, a five-year field experiment was conducted in a temperate meadow. We examined the responses of soil fungal and bacterial community compositions and structures to warming and N addition using ITS gene and 16S rRNA gene MiSeq sequencing methods, respectively. Warming and N addition not only increased the diversity of soil fungal species but also affected the soil fungal community structure. Warming and N addition caused significant declines in soil bacterial richness but had few impacts on bacterial community structure. The changes in plant species richness affected the soil fungal community structure, while the changes in plant cover also affected the bacterial community structure. The response of the soil bacterial community structure to warming and N addition was lower than that of the fungal community structure. Our results highlight that the influence of global changes on soil fungal and bacterial community structures might be different, and which also might be determined, to some extent, by plant community, soil physicochemical properties, and climate characteristics at the regional scale.
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Affiliation(s)
- Ming Jiang
- College of Life Science and Technology, Mudanjiang Normal University, Mudanjiang, China
- Key Laboratory of Vegetation Ecology, Ministry of Education, Jilin Songnen Grassland Ecosystem National Observation and Research Station, Changchun, China
| | - Yibo Tian
- Key Laboratory of Vegetation Ecology, Ministry of Education, Jilin Songnen Grassland Ecosystem National Observation and Research Station, Changchun, China
| | - Rui Guo
- Institute of Environment and Sustainable Development in Agriculture, Chinese Academy of Agricultural Sciences, Key Laboratory of Dryland Agriculture, Ministry of Agriculture, Beijing, China
| | - Shuying Li
- Forestry and Grassland Bureau of Aohan Banner, Chifeng, China
| | - Jixun Guo
- Key Laboratory of Vegetation Ecology, Ministry of Education, Jilin Songnen Grassland Ecosystem National Observation and Research Station, Changchun, China
| | - Tao Zhang
- Key Laboratory of Vegetation Ecology, Ministry of Education, Jilin Songnen Grassland Ecosystem National Observation and Research Station, Changchun, China
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11
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Fu F, Li J, Li Y, Chen W, Ding H, Xiao S. Simulating the effect of climate change on soil microbial community in an Abies georgei var. smithii forest. Front Microbiol 2023; 14:1189859. [PMID: 37333631 PMCID: PMC10272780 DOI: 10.3389/fmicb.2023.1189859] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/20/2023] [Accepted: 05/11/2023] [Indexed: 06/20/2023] Open
Abstract
Qinghai-Tibet Plateau is considered a region vulnerable to the effects of climate change. Studying the effects of climate change on the structure and function of soil microbial communities will provide insight into the carbon cycle under climate change. However, to date, changes in the successional dynamics and stability of microbial communities under the combined effects of climate change (warming or cooling) remain unknown, which limits our ability to predict the consequences of future climate change. In this study, in situ soil columns of an Abies georgei var. smithii forest at 4,300 and 3,500 m elevation in the Sygera Mountains were incubated in pairs for 1 year using the PVC tube method to simulate climate warming and cooling, corresponding to a temperature change of ±4.7°C. Illumina HiSeq sequencing was applied to study alterations in soil bacterial and fungal communities of different soil layers. Results showed that warming did not significantly affect the fungal and bacterial diversity of the 0-10 cm soil layer, but the fungal and bacterial diversity of the 20-30 cm soil layer increased significantly after warming. Warming changed the structure of fungal and bacterial communities in all soil layers (0-10 cm, 10-20 cm, and 20-30 cm), and the effect increased with the increase of soil layers. Cooling had almost no significant effect on fungal and bacterial diversity in all soil layers. Cooling changed the structure of fungal communities in all soil layers, but it showed no significant effect on the structure of bacterial communities in all soil layers because fungi are more adapted than bacteria to environments with high soil water content (SWC) and low temperatures. Redundancy analysis (RDA) and hierarchical analysis showed that changes in soil bacterial community structure were primarily related to soil physical and chemical properties, whereas changes in soil fungal community structure primarily affected SWC and soil temperature (Soil Temp). The specialization ratio of fungi and bacteria increased with soil depth, and fungi were significantly higher than bacteria, indicating that climate change has a greater impact on microorganisms in deeper soil layers, and fungi are more sensitive to climate change. Furthermore, a warmer climate could create more ecological niches for microbial species to coexist and increase the strength of microbial interactions, whereas a cooler climate could have the opposite effect. However, we found differences in the intensity of microbial interactions in response to climate change in different soil layers. This study provides new insights to understand and predict future effects of climate change on soil microbes in alpine forest ecosystems.
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Affiliation(s)
- Fangwei Fu
- Research Institute of Tibet Plateau Ecology, Tibet Agriculture and Animal Husbandry University, Nyingchi, Tibet, China
- Key Laboratory of Forest Ecology in Tibet Plateau, Ministry of Education, Nyingchi, Tibet, China
- National Key Station of Field Scientific Observation and Experiment, Nyingchi, Tibet, China
- Key Laboratory of Alpine Vegetation Ecological Security in Tibet, Nyingchi, Tibet, China
| | - Jiangrong Li
- Research Institute of Tibet Plateau Ecology, Tibet Agriculture and Animal Husbandry University, Nyingchi, Tibet, China
- Key Laboratory of Forest Ecology in Tibet Plateau, Ministry of Education, Nyingchi, Tibet, China
- National Key Station of Field Scientific Observation and Experiment, Nyingchi, Tibet, China
- Key Laboratory of Alpine Vegetation Ecological Security in Tibet, Nyingchi, Tibet, China
- State Key Laboratory of Tibetan Plateau Earth System, Resources and Environment (TPESRE), Institute of Tibetan Plateau Research, Chinese Academy of Sciences, Beijing, China
| | - Yueyao Li
- Research Institute of Tibet Plateau Ecology, Tibet Agriculture and Animal Husbandry University, Nyingchi, Tibet, China
- Key Laboratory of Forest Ecology in Tibet Plateau, Ministry of Education, Nyingchi, Tibet, China
- National Key Station of Field Scientific Observation and Experiment, Nyingchi, Tibet, China
- Key Laboratory of Alpine Vegetation Ecological Security in Tibet, Nyingchi, Tibet, China
| | - Wensheng Chen
- Research Institute of Tibet Plateau Ecology, Tibet Agriculture and Animal Husbandry University, Nyingchi, Tibet, China
- Key Laboratory of Forest Ecology in Tibet Plateau, Ministry of Education, Nyingchi, Tibet, China
- National Key Station of Field Scientific Observation and Experiment, Nyingchi, Tibet, China
- Key Laboratory of Alpine Vegetation Ecological Security in Tibet, Nyingchi, Tibet, China
| | - Huihui Ding
- Research Institute of Tibet Plateau Ecology, Tibet Agriculture and Animal Husbandry University, Nyingchi, Tibet, China
- Key Laboratory of Forest Ecology in Tibet Plateau, Ministry of Education, Nyingchi, Tibet, China
- National Key Station of Field Scientific Observation and Experiment, Nyingchi, Tibet, China
- Key Laboratory of Alpine Vegetation Ecological Security in Tibet, Nyingchi, Tibet, China
| | - Siying Xiao
- Research Institute of Tibet Plateau Ecology, Tibet Agriculture and Animal Husbandry University, Nyingchi, Tibet, China
- Key Laboratory of Forest Ecology in Tibet Plateau, Ministry of Education, Nyingchi, Tibet, China
- National Key Station of Field Scientific Observation and Experiment, Nyingchi, Tibet, China
- Key Laboratory of Alpine Vegetation Ecological Security in Tibet, Nyingchi, Tibet, China
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12
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Han F, Yu C, Fu G. Temperature sensitivities of aboveground net primary production, species and phylogenetic diversity do not increase with increasing elevation in alpine grasslands. Glob Ecol Conserv 2023. [DOI: 10.1016/j.gecco.2023.e02464] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/08/2023] Open
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13
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Sui X, Li M, Frey B, Dai G, Yang L, Li MH. Effect of elevation on composition and diversity of fungi in the rhizosphere of a population of Deyeuxia angustifolia on Changbai Mountain, northeastern China. Front Microbiol 2023; 14:1087475. [PMID: 37266006 PMCID: PMC10231489 DOI: 10.3389/fmicb.2023.1087475] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/02/2022] [Accepted: 03/27/2023] [Indexed: 06/03/2023] Open
Abstract
Soil fungi are a key component of terrestrial ecosystems and play a major role in soil biogeochemical cycling. Although the diversity and composition of fungal communities are regulated by many abiotic and biotic factors, the effect of elevation on soil fungal community diversity and composition remains largely unknown. In this study, the soil fungal composition and diversity in Deyeuxia angustifolia populations along an elevational gradient (1,690 m to 2020 m a.s.l.) were assessed, using Illumina MiSeq sequencing, on the north-facing slope of the Changbai Mountain, northeastern China. Our results showed that soil physicochemical parameters changed significantly along with the elevational gradients. The Ascomycota and Basidiomycota were the most dominant phyla along with the gradient. Alpha diversity of soil fungi decreased significantly with elevation. Soil nitrate nitrogen (NO3--N) was positively correlated with fungal richness and phylogenetic diversity (PD), indicating that soil nitrate nitrogen (NO3--N) is a key soil property determining fungal community diversity. In addition to soil nitrate content, soil pH and soil moisture were the most important environmental properties determining the soil fungal diversity. Our results suggest that the elevational changes in soil physicochemical properties play a key role in shaping the community composition and diversity of soil fungi. This study will allow us to better understand the biodiversity distribution patterns of soil microorganisms in mountain ecosystems.
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Affiliation(s)
- Xin Sui
- Engineering Research Center of Agricultural Microbiology Technology, Ministry of Education, Heilongjiang University, Harbin, China
- Heilongjiang Provincial Key Laboratory of Ecological Restoration and Resource Utilization for Cold Region, School of Life Sciences, Heilongjiang University, Harbin, China
- Swiss Federal Institute for Forest, Snow and Landscape Research WSL, Birmensdorf, Switzerland
| | - Mengsha Li
- School of Forestry, Northeast Forestry University, Harbin, China
- Institute of Nature and Ecology, Heilongjiang Academy of Sciences, Harbin, China
| | - Beat Frey
- Swiss Federal Institute for Forest, Snow and Landscape Research WSL, Birmensdorf, Switzerland
| | - Guanhua Dai
- Research Station of Changbai Mountain Forest Ecosystems, Chinese Academy of Sciences, Erdaobaihe, China
| | - Libin Yang
- School of Forestry, Northeast Forestry University, Harbin, China
- Institute of Nature and Ecology, Heilongjiang Academy of Sciences, Harbin, China
| | - Mai-He Li
- Swiss Federal Institute for Forest, Snow and Landscape Research WSL, Birmensdorf, Switzerland
- Key Laboratory of Geographical Processes and Ecological Security in Changbai Mountains, Ministry of Education, School of Geographical Sciences, Northeast Normal University, Changchun, China
- School of Life Sciences, Hebei University, Baoding, China
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14
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Han F, Yu C, Fu G. Non-growing/growing season non-uniform-warming increases precipitation use efficiency but reduces its temporal stability in an alpine meadow. FRONTIERS IN PLANT SCIENCE 2023; 14:1090204. [PMID: 36778684 PMCID: PMC9911657 DOI: 10.3389/fpls.2023.1090204] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/05/2022] [Accepted: 01/19/2023] [Indexed: 06/18/2023]
Abstract
There are still uncertainties on the impacts of season-non-uniform-warming on plant precipitation use efficiency (PUE) and its temporal stability (PUEstability) in alpine areas. Here, we examined the changes of PUE and PUEstability under two scenes of non-growing/growing season non-uniform-warming (i.e., GLNG: growing-season-warming lower than non-growing-season-warming; GHNG: growing-season-warming higher than non-growing-season-warming) based on a five-year non-uniform-warming of non-growing/growing season experiment. The GLNG treatment increased PUE by 38.70% and reduced PUEstability by 50.47%, but the GHNG treatment did not change PUE and PUEstability. This finding was mainly due to the fact that the GLNG treatment had stronger influences on aboveground biomass (AGB), non-growing-season soil moisture (SMNG), temporal stability of AGB (AGBstability), temporal stability of non-growing-season air temperature (T a_NG_stability), temporal stability of growing-season vapor pressure deficit (VPDG_stability) and temporal stability of start of growing-season (SGSstability). Therefore, the warming scene with a higher non-growing-season-warming can have greater influences on PUE and PUEstability than the warming scene with a higher growing-season-warming, and there were possibly trade-offs between plant PUE and PUEstability under season-non-uniform-warming scenes in the alpine meadow.
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15
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Huang S, Yu C, Fu G, Sun W, Li S, Xiao J. Different responses of soil bacterial species diversity and phylogenetic diversity to short-term nitrogen input in an alpine steppe at the source of Brahmaputra. Front Ecol Evol 2022. [DOI: 10.3389/fevo.2022.1073177] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022] Open
Abstract
The Qinghai-Tibet Plateau has experienced an increase in N deposition/input due to global change. However, it remains unclear how the responses and whether the responses of soil bacterial diversity to short-term N input are consistent at different levels. Here, we investigated soil bacterial species and phylogenetic α-diversity and community composition based on a short-term nitrogen input experiment (five levels: 0, 2.5, 5, 10, and 20 g N m−2 y−1) in an alpine steppe at the source of Brahmaputra, using high-throughput sequencing technology. Short-term nitrogen input did not affect the species α-diversity and β-diversity of soil bacteria. However, soil bacterial phylogenetic α-diversity and dissimilarity increased with increasing nitrogen input. Different relative contributions and correlations of primary factors to species and phylogenetic diversity under short-term nitrogen input may result in different responses, in which ecological processes also play a role. Therefore, studying the response of soil bacteria to short-term nitrogen input should take into account not only the species level but also the phylogenetic level. We should pay close attention to the potential influence of short-term nitrogen deposition/fertilization on the soil bacterial community in the alpine steppe on the Tibetan Plateau.
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16
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Zhang G, Shen Z, Fu G. Geo-Distribution Patterns of Soil Fungal Community of Pennisetum flaccidum in Tibet. J Fungi (Basel) 2022; 8:1230. [PMID: 36422051 PMCID: PMC9699603 DOI: 10.3390/jof8111230] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/01/2022] [Revised: 11/14/2022] [Accepted: 11/15/2022] [Indexed: 08/27/2023] Open
Abstract
Pennisetum flaccidum can be used as a pioneer species for the restoration of degraded grasslands and as a high-quality forage for local yak and sheep in alpine regions. The geographical distribution pattern of soil fungal community can modify that of P. flaccidum. A field survey along 32 sampling sites was conducted to explore the geo-distribution patterns of soil fungal community of P. flaccidum in Tibet. Soil fungal species, phylogenetic and function diversity generally had a closer correlation with longitude/elevation than latitude. The geo-distribution patterns of soil fungal species, phylogenetic and function diversity varied with soil depth. Soil fungal species, phylogenetic and function diversity had dissimilar geo-distribution patterns. Precipitation had stronger impacts on total abundance, species α-diversity, phylogenetic α-diversity, and function β-diversity than temperature for both topsoil (0-10 cm depth) and subtopsoil (10-20 cm depth). Furthermore, precipitation had stronger impacts on function α-diversity for topsoil, species β-diversity for topsoil, and phylogenetic β-diversity for subtopsoil than temperature. The combination of species, phylogenetic and function diversity can better reflect geo-distribution patterns of soil fungal community. Compared to global warming, the impact of precipitation change on the variation in soil fungal community of P. flaccidum should be given more attention.
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Affiliation(s)
| | | | - Gang Fu
- Lhasa Plateau Ecosystem Research Station, Key Laboratory of Ecosystem Network Observation and Modeling, Institute of Geographic Sciences and Natural Resources Research, Chinese Academy of Sciences, Beijing 100101, China
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17
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Shi L, Lin Z, Wei X, Peng C, Yao Z, Han B, Xiao Q, Zhou H, Deng Y, Liu K, Shao X. Precipitation increase counteracts warming effects on plant and soil C:N:P stoichiometry in an alpine meadow. FRONTIERS IN PLANT SCIENCE 2022; 13:1044173. [PMID: 36407610 PMCID: PMC9666903 DOI: 10.3389/fpls.2022.1044173] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 09/14/2022] [Accepted: 10/17/2022] [Indexed: 06/16/2023]
Abstract
Temperature and precipitation are expected to increase in the forthcoming decades in the northeastern Qinghai-Tibetan Plateau, with uncertain effects of their interaction on plant and soil carbon:nitrogen:phosphorus (C:N:P) stoichiometry in alpine ecosystems. A two-year field experiment was conducted to examine the effects of warming, precipitation increase, and their interaction on soil and plant C:N:P stoichiometry at functional groups and community level in an alpine meadow. Warming increased aboveground biomass of legumes and N:P ratios of grasses and community, but did not affect soil C:N:P stoichiometry. The piecewise structural equation model (SEM) indicated that the positive effect of warming on community N:P ratio was mainly resulted from its positive influence on the aboveground biomass of functional groups. Precipitation increase reduced C:N ratios of soil, grasses, and community, indicating the alleviation in soil N-limitation and the reduction in N use efficiency of plant. SEM also demonstrated the decisive role of grasses C:N:P stoichiometry on the response of community C:N:P stoichiometry to precipitation increase. The interaction of warming and precipitation increase did not alter plant community and soil, N:P and C:P ratios, which was resulting from their antagonistic effects. The stable soil and plant community C:N:P stoichiometry raised important implications that the effect of warming was offset by precipitation increase. Our study highlights the importance of considering the interaction between warming and precipitation increase when predicting the impacts of climate change on biogeochemical cycles in alpine meadow ecosystems.
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Affiliation(s)
- Lina Shi
- College of Grassland Science and Technology, China Agricultural University, Beijing, China
| | - Zhenrong Lin
- College of Grassland Science and Technology, China Agricultural University, Beijing, China
| | - Xiaoting Wei
- Institute of Ecological Protection and Restoration, Chinese Academy of Forestry, Beijing, China
| | - Cuoji Peng
- College of Grassland Science and Technology, China Agricultural University, Beijing, China
| | - Zeying Yao
- College of Grassland Science and Technology, China Agricultural University, Beijing, China
- College of Grassland Science, Gansu Agricultural University, Lanzhou, China
| | - Bing Han
- College of Grassland Science and Technology, China Agricultural University, Beijing, China
| | - Qing Xiao
- College of Grassland Science and Technology, China Agricultural University, Beijing, China
| | - Huakun Zhou
- Key Laboratory of Restoration Ecology of Cold Area in Qinghai Province, Northwest Institute of Plateau Biology, Chinese Academy of Science, Xining, China
| | - Yanfang Deng
- Qilian Mountain National Park Qinghai Service Guarantee Center, Xining, China
| | - Kesi Liu
- College of Grassland Science and Technology, China Agricultural University, Beijing, China
| | - Xinqing Shao
- College of Grassland Science and Technology, China Agricultural University, Beijing, China
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18
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Zha X, Tian Y, Ouzhu, Fu G. Response of forage nutrient storages to grazing in alpine grasslands. FRONTIERS IN PLANT SCIENCE 2022; 13:991287. [PMID: 36388576 PMCID: PMC9664390 DOI: 10.3389/fpls.2022.991287] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/11/2022] [Accepted: 08/26/2022] [Indexed: 07/30/2023]
Abstract
Forage nutrient storages can determine livestock size and husbandry development. There is insufficient research on the response of forage nutrient storages to grazing and related driving mechanisms in alpine grasslands, especially on the Tibetan Plateau. This study conducted a grazing experiment in three alpine grassland sites along an elevation gradient (two warm-season pastures and one cold-season pasture; two alpine steppe meadow sites and one alpine meadow) of Northern Tibet. Different types of alpine grassland ecosystems, at least for forage nutrient storages, may have different responses to grazing. Warm-season grazing significantly reduced crude protein (CP) storage, acid detergent fiber (ADF) storage, and neutral detergent fiber (NDF) storage of high-quality forage by 53.29, 63.82, and 63.26%, respectively, but cold-season grazing did not significantly alter the CP, ADF and NDF storages of high-quality forage. Warm-season grazing significantly reduced CP, ADF, NDF, crude ash (Ash), ether extract (EE) and water-soluble carbohydrate (WSC) storages of the plant community by 46.61, 62.47, 55.96, 64.94, 60.34, and 52.68%, and forbs by 62.33, 77.50, 73.69, 65.05, 57.75, and 62.44% in the alpine meadow site but not the alpine steppe meadow site, respectively. Plant species and phylogenetic diversity had different relationships with forage nutrient storages. The elevation distribution of forage nutrient storages under fencing conditions were different from those under grazing conditions. Therefore, cold-season grazing can have lower negative effects on forage nutrient storages than warm-season grazing. Combined plant species with phylogenetic diversity and composition can be better in predicting forage nutrient storages. Grazing can restructure the elevation distribution of forage nutrient storages in alpine grasslands.
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Affiliation(s)
- Xinjie Zha
- Xi'an University of Finance and Economics, Xi'an, China
| | - Yuan Tian
- Lhasa Plateau Ecosystem Research Station, Key Laboratory of Ecosystem Network Observation and Modeling, Institute of Geographic Sciences and Natural Resources Research, Chinese Academy of Sciences, Beijing, China
| | - Ouzhu
- Agriculture and Animal Husbandry Comprehensive Service Center of Gamba County, Shigatse, China
| | - Gang Fu
- Lhasa Plateau Ecosystem Research Station, Key Laboratory of Ecosystem Network Observation and Modeling, Institute of Geographic Sciences and Natural Resources Research, Chinese Academy of Sciences, Beijing, China
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Wei X, Wu F, Heděnec P, Yue K, Peng Y, Yang J, Zhang X, Ni X. Changes in soil faunal density and microbial community under altered litter input in forests and grasslands. FUNDAMENTAL RESEARCH 2022; 2:954-963. [PMID: 38933376 PMCID: PMC11197608 DOI: 10.1016/j.fmre.2022.01.029] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/10/2021] [Revised: 01/07/2022] [Accepted: 01/19/2022] [Indexed: 11/21/2022] Open
Abstract
Root and foliar litter inputs are the primary sources of carbon and nutrients for soil fauna and microorganisms, yet we still lack a quantitative assessment to evaluate the effects of root and foliar litter on various groups of soil organisms across terrestrial ecosystems. Here, we compiled 978 paired observations from 68 experimental sites to assess the directions and magnitudes of adding and removing foliar and root litter on the soil faunal density and microbial biomass that was evaluated by phospholipid fatty acids (PLFAs) across forests and grasslands worldwide. We found that litter addition had only a marginal effect on soil faunal density but significantly increased the soil total microbial-, fungal- and bacterial-PLFAs by 13%, 14%, and 10%, respectively, across ecosystems, suggesting that the soil microbial community is more sensitive to carbon source addition than soil fauna, particularly in soils with low carbon to nitrogen ratios. In contrast, removing litter significantly decreased the soil faunal density by 17% but had few effects on soil microorganisms. Compared with foliar litter, root litter input had a more positive effect on the development of soil fungal taxa. The effect of both litter addition and removal on soil faunal density and microbial biomass did not differ between humid and arid regions, but a greater influence was observed in grasslands than in forests for soil microbial community. Our results highlight that the increasing litter production under a global greening scenario would stimulate microbial activity in grasslands more than in forests, and this stimulation would be greater for soil microbes than soil fauna.
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Affiliation(s)
- Xinyu Wei
- Key Laboratory for Humid Subtropical Eco-Geographical Processes of the Ministry of Education, School of Geographical Sciences, Fujian Normal University, Fuzhou 350007, China
| | - Fuzhong Wu
- Key Laboratory for Humid Subtropical Eco-Geographical Processes of the Ministry of Education, School of Geographical Sciences, Fujian Normal University, Fuzhou 350007, China
| | - Petr Heděnec
- Agritec Plant Research Ltd., Zemědělská 16, Šumperk 78701, Czech Republic
- Institute of Tropical Biodiversity and Sustainable Development, University Malaysia Terengganu, Kuala Nerus, Terengganu 21030, Malaysia
| | - Kai Yue
- Key Laboratory for Humid Subtropical Eco-Geographical Processes of the Ministry of Education, School of Geographical Sciences, Fujian Normal University, Fuzhou 350007, China
| | - Yan Peng
- Key Laboratory for Humid Subtropical Eco-Geographical Processes of the Ministry of Education, School of Geographical Sciences, Fujian Normal University, Fuzhou 350007, China
| | - Jing Yang
- Key Laboratory for Humid Subtropical Eco-Geographical Processes of the Ministry of Education, School of Geographical Sciences, Fujian Normal University, Fuzhou 350007, China
| | - Xiaoyue Zhang
- Key Laboratory for Humid Subtropical Eco-Geographical Processes of the Ministry of Education, School of Geographical Sciences, Fujian Normal University, Fuzhou 350007, China
| | - Xiangyin Ni
- Key Laboratory for Humid Subtropical Eco-Geographical Processes of the Ministry of Education, School of Geographical Sciences, Fujian Normal University, Fuzhou 350007, China
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Warming alters elevation distributions of soil bacterial and fungal communities in alpine grasslands. Glob Ecol Conserv 2022. [DOI: 10.1016/j.gecco.2022.e02306] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022] Open
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21
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Fu G, Wang J, Li S. Response of forage nutritional quality to climate change and human activities in alpine grasslands. THE SCIENCE OF THE TOTAL ENVIRONMENT 2022; 845:157552. [PMID: 35872197 DOI: 10.1016/j.scitotenv.2022.157552] [Citation(s) in RCA: 14] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/25/2022] [Revised: 07/17/2022] [Accepted: 07/18/2022] [Indexed: 06/15/2023]
Abstract
The impacts of climate change and human activities on forage nutritional quality will affect nutrient capacity, livestock development and wildlife conservation in alpine regions. However, the response of forage nutritional quality to climate change and human activities remains indistinguishable across the whole Tibet. Here, six forage variables (i.e., crude protein, CP; ether extract, EE; crude ash, Ash; acid detergent fiber, ADF; neutral detergent fiber, NDF; water-soluble carbohydrates, WSC) together represented forage nutritional quality. We estimated potential forage CP, EE, Ash, ADF, NDF and WSC contents using growing mean air temperature, total precipitation and total radiation based on random forest models. We also estimated actual forage CP, EE, Ash, ADF, NDF and WSC contents using growing mean air temperature, total precipitation and total radiation, and maximum normalized difference vegetation index based on random forest models. Climate change had nonlinear effects on potential forage CP, EE, Ash, ADF, NDF and WSC contents. Radiation change predominated the variations of potential forage nutritional quality. Human activities altered the sensitivities of forage nutritional quality to climate change. The effects of human activities on forage nutritional quality increased with increasing longitude and precipitation, and decreasing elevation and radiation. Consequently, we should pay attention to the radiation change besides climate warming and precipitation change, at least for forage nutritional quality in alpine grasslands. The effects of human activities on forage nutritional quality can vary with longitude, elevation, precipitation and radiation in alpine grasslands.
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Affiliation(s)
- Gang Fu
- Lhasa Plateau Ecosystem Research Station, Key Laboratory of Ecosystem Network Observation and Modeling, Institute of Geographic Sciences and Natural Resources Research, Chinese Academy of Sciences, Beijing 100101, China.
| | - Junhao Wang
- Lhasa Plateau Ecosystem Research Station, Key Laboratory of Ecosystem Network Observation and Modeling, Institute of Geographic Sciences and Natural Resources Research, Chinese Academy of Sciences, Beijing 100101, China; University of Chinese Academy of Sciences, Beijing 100049, China
| | - Shaowei Li
- Lhasa Plateau Ecosystem Research Station, Key Laboratory of Ecosystem Network Observation and Modeling, Institute of Geographic Sciences and Natural Resources Research, Chinese Academy of Sciences, Beijing 100101, China.
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Fu G, Sun W. Temperature sensitivities of vegetation indices and aboveground biomass are primarily linked with warming magnitude in high-cold grasslands. THE SCIENCE OF THE TOTAL ENVIRONMENT 2022; 843:157002. [PMID: 35772540 DOI: 10.1016/j.scitotenv.2022.157002] [Citation(s) in RCA: 11] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/14/2022] [Revised: 06/21/2022] [Accepted: 06/23/2022] [Indexed: 06/15/2023]
Abstract
Incessant argument on whether temperature sensitivity of aboveground biomass is primarily linked with temperature itself (local air temperature and increased magnitudes in air temperature) or other environmental variables restrains our capability to exactly forecast upcoming alterations in grass yield and high-quality development of animal husbandry in high-cold areas. Consequently, since May 2010, a field warming trial with open-top containers was achieved in high-cold grasslands at three elevations (i.e. 4313, 4513 and 4693 m) of the Tibet. The temperature sensitivities of normalized different vegetation indices (Q1_NDVI), soil adjusted vegetation indices (Q1_SAVI) and aboveground biomass (Q1_AGB) were detected in 2014-2015 and 2017-2018. Temperature itself had the greatest exclusive impacts on the Q1_NDVI, Q1_SAVI and Q1_AGB. Vegetation indices itself or aboveground biomass itself had the second greatest exclusive impacts on the Q1_NDVI, Q1_SAVI or Q1_AGB. The exclusive impact of vegetation indices itself or aboveground biomass itself was less than one-tenth that of temperature itself. Water availability and elevation & duration (elevation and warming length) only had exclusive impacts on the Q1_NDVI and Q1_SAVI. The total exclusive impact of water availability and elevation & duration on the Q1_NDVI or Q1_SAVI was around 11-12 % equivalent to that of temperature itself. Vegetation indices/aboveground biomass itself, water availability and elevation & duration had interactive impacts with temperature itself on the Q1_NDVI, Q1_SAVI or Q1_AGB. Compared to local air temperature, increased magnitudes in air temperature had the greater exclusive effects on the Q1_NDVI, Q1_SAVI and Q1_AGB. Consequently, temperature sensitivities of vegetation indices, and aboveground biomass were primarily linked with temperature itself (especially warming magnitude), and adjusted by water availability, vegetation indices/aboveground biomass itself, elevation and warming length in high-cold grasslands of the Tibet.
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Affiliation(s)
- Gang Fu
- Lhasa Plateau Ecosystem Research Station, Key Laboratory of Ecosystem Network Observation and Modeling, Institute of Geographic Sciences and Natural Resources Research, Chinese Academy of Sciences, Beijing 100101, China.
| | - Wei Sun
- Lhasa Plateau Ecosystem Research Station, Key Laboratory of Ecosystem Network Observation and Modeling, Institute of Geographic Sciences and Natural Resources Research, Chinese Academy of Sciences, Beijing 100101, China.
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Baldrian P, Bell-Dereske L, Lepinay C, Větrovský T, Kohout P. Fungal communities in soils under global change. Stud Mycol 2022; 103:1-24. [PMID: 36760734 PMCID: PMC9886077 DOI: 10.3114/sim.2022.103.01] [Citation(s) in RCA: 10] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/13/2022] [Accepted: 09/16/2022] [Indexed: 11/07/2022] Open
Abstract
Soil fungi play indispensable roles in all ecosystems including the recycling of organic matter and interactions with plants, both as symbionts and pathogens. Past observations and experimental manipulations indicate that projected global change effects, including the increase of CO2 concentration, temperature, change of precipitation and nitrogen (N) deposition, affect fungal species and communities in soils. Although the observed effects depend on the size and duration of change and reflect local conditions, increased N deposition seems to have the most profound effect on fungal communities. The plant-mutualistic fungal guilds - ectomycorrhizal fungi and arbuscular mycorrhizal fungi - appear to be especially responsive to global change factors with N deposition and warming seemingly having the strongest adverse effects. While global change effects on fungal biodiversity seem to be limited, multiple studies demonstrate increases in abundance and dispersal of plant pathogenic fungi. Additionally, ecosystems weakened by global change-induced phenomena, such as drought, are more vulnerable to pathogen outbreaks. The shift from mutualistic fungi to plant pathogens is likely the largest potential threat for the future functioning of natural and managed ecosystems. However, our ability to predict global change effects on fungi is still insufficient and requires further experimental work and long-term observations. Citation: Baldrian P, Bell-Dereske L, Lepinay C, Větrovský T, Kohout P (2022). Fungal communities in soils under global change. Studies in Mycology 103: 1-24. doi: 10.3114/sim.2022.103.01.
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Affiliation(s)
- P. Baldrian
- Laboratory of Environmental Microbiology, Institute of Microbiology of the Czech Academy of Sciences, Vídeòská 1083, 142 20 Prague, Czech Republic,*Corresponding author: Petr Baldrian,
| | - L. Bell-Dereske
- Laboratory of Environmental Microbiology, Institute of Microbiology of the Czech Academy of Sciences, Vídeòská 1083, 142 20 Prague, Czech Republic
| | - C. Lepinay
- Laboratory of Environmental Microbiology, Institute of Microbiology of the Czech Academy of Sciences, Vídeòská 1083, 142 20 Prague, Czech Republic
| | - T. Větrovský
- Laboratory of Environmental Microbiology, Institute of Microbiology of the Czech Academy of Sciences, Vídeòská 1083, 142 20 Prague, Czech Republic
| | - P. Kohout
- Laboratory of Environmental Microbiology, Institute of Microbiology of the Czech Academy of Sciences, Vídeòská 1083, 142 20 Prague, Czech Republic
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24
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Terrain gradient variations in the ecosystem services value of the Qinghai-Tibet Plateau, China. Glob Ecol Conserv 2022. [DOI: 10.1016/j.gecco.2022.e02008] [Citation(s) in RCA: 7] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/05/2023] Open
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25
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Fu G, Shen ZX. Asymmetrical warming of growing/non-growing season increases soil respiration during growing season in an alpine meadow. THE SCIENCE OF THE TOTAL ENVIRONMENT 2022; 812:152591. [PMID: 34954180 DOI: 10.1016/j.scitotenv.2021.152591] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/23/2021] [Revised: 12/06/2021] [Accepted: 12/17/2021] [Indexed: 06/14/2023]
Abstract
Soil respiration (Rs) is an important carbon flux in the global carbon cycle, and understanding the influence of global warming on Rs is critical for precise prediction future climate change. Actually, global warming is expected to be seasonally asymmetric, however, it is still unclear on the response of Rs to asymmetrical warming of growing/non-growing season in alpine regions. In this study, an experiment with asymmetrical warming of growing/non-growing season (including three treatments, CK: control; GLNG: warming magnitude of growing season lower than non-growing season; GHNG: warming magnitude of growing season higher than non-growing season) was performed in an alpine meadow of the Northern Tibet since June 2015. The 'GLNG' and 'GHNG' treatments increased mean Rs by 71.22% (1.89 μmol CO2 m-2 s-1) and 34.32% (0.91 μmol CO2 m-2 s-1) during growing season in 2019, respectively. However, the 'GLNG' and 'GHNG' treatments did not significantly affect mean Rs during growing season in 2015, 2016, 2017 and 2018, respectively. The variation coefficient of growing season mean Rs was 32.95% under the CK treatment in 2015-2019. Therefore, warming may have a lagging effect on Rs. The warming scene with a greater warming during non-growing season may have a stronger effect on Rs than the warming scene with a greater warming during growing season. Inter-annual variation of Rs may be greater than the warming effect on Rs in alpine meadows.
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Affiliation(s)
- Gang Fu
- Lhasa Plateau Ecosystem Research Station, Key Laboratory of Ecosystem Network Observation and Modeling, Institute of Geographic Sciences and Natural Resources Research, Chinese Academy of Sciences, Beijing 100101, China.
| | - Zhen-Xi Shen
- Lhasa Plateau Ecosystem Research Station, Key Laboratory of Ecosystem Network Observation and Modeling, Institute of Geographic Sciences and Natural Resources Research, Chinese Academy of Sciences, Beijing 100101, China
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26
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Chen K, Zhou H, Wu Y, Zhao Z, Li Y, Qiao L, Liu G, Xue S. Effects of long-term nitrogen & phosphorus fertilization on soil microbial, bacterial and fungi respiration and their temperature sensitivity on the Qinghai-Tibet Plateau. PeerJ 2022; 10:e12851. [PMID: 35233293 PMCID: PMC8882332 DOI: 10.7717/peerj.12851] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/27/2021] [Accepted: 01/07/2022] [Indexed: 01/10/2023] Open
Abstract
BACKGROUND The microbial decomposition of soil organic carbon (SOC) is a major source of carbon loss, especially in ecologically fragile regions (e.g., the Tibetan Plateau), which are also affected by global warming and anthropogenic activities (e.g., fertilization). The inherent differences between bacteria and fungi indicate that they are likely to play distinct roles in the above processes. However, there still have been no reports on that, which is restricting our knowledge about the mechanisms underlying SOC decomposition. METHODS A long-term nitrogen (N) and phosphorus (P) addition field experiment was conducted to assess their effects on soil microbial, fungal, and bacterial respiration (RM, RF, and RB, respectively) and temperature sensitivity (Q10; at 15 °C, 25 °C, and 35 °C) using cycloheximide and streptomycin to inhibit the growth of fungi and bacteria. RESULTS We found that N suppressed RM and RF at all temperatures, but RB was only suppressed at 15 °C, regardless of the addition of P. The addition of N significantly decreased the ratio of RF/RM at 35 °C, and the combined NP treatment increased the Q10 of RB but not that of RF. Results of the redundancy analysis showed that variations in soil respiration were linked with NO3 --N formation, while the variations in Q10 were linked with SOC complexity. Long-term N addition suppressed RM by the formation of NO3 --N, and this was mediated by fungi rather than bacteria. The contribution of fungi toward SOC decomposition was weakened by N addition and increasing temperatures. Combined NP addition increased the Q10 of RB due to increased SOC complexity. The present study emphasizes the importance of fungi and the soil environment in SOC decomposition. It also highlights that the role of bacteria and SOC quality will be important in the future due to global warming and increasing N deposition.
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Affiliation(s)
- Kelu Chen
- State Key Laboratory of Soil Erosion and Dryland Farming on the Loess Plateau,Institute of Soil and Water Conservation, Northwest A&F University, Yangling, China
| | - Huakun Zhou
- Qinghai Provincial Key Laboratory of Restoration Ecology in Cold Regions, Northwest Institute of Plateau Biology, Chinese Academy of Sciences, Xining, China,Qinghai University, Xining, China
| | - Yang Wu
- State Key Laboratory of Soil Erosion and Dryland Farming on the Loess Plateau,Institute of Soil and Water Conservation, Northwest A&F University, Yangling, China
| | - Ziwen Zhao
- State Key Laboratory of Soil Erosion and Dryland Farming on the Loess Plateau,Institute of Soil and Water Conservation, Northwest A&F University, Yangling, China
| | - Yuanze Li
- State Key Laboratory of Soil Erosion and Dryland Farming on the Loess Plateau,Institute of Soil and Water Conservation, Northwest A&F University, Yangling, China
| | - Leilei Qiao
- Institute of Soil and Water Conservation, Chinese Academy of Sciences and Ministry of Water Resources, Yangling, China,University of Chinese Academy of Sciences, Beijing, China
| | - Guobin Liu
- State Key Laboratory of Soil Erosion and Dryland Farming on the Loess Plateau,Institute of Soil and Water Conservation, Northwest A&F University, Yangling, China,Institute of Soil and Water Conservation, Chinese Academy of Sciences and Ministry of Water Resources, Yangling, China
| | - Sha Xue
- State Key Laboratory of Soil Erosion and Dryland Farming on the Loess Plateau,Institute of Soil and Water Conservation, Northwest A&F University, Yangling, China,Qinghai University, Xining, China,Institute of Soil and Water Conservation, Chinese Academy of Sciences and Ministry of Water Resources, Yangling, China
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27
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Dong X, Liu C, Ma D, Wu Y, Man H, Wu X, Li M, Zang S. Organic Carbon Mineralization and Bacterial Community of Active Layer Soils Response to Short-Term Warming in the Great Hing'an Mountains of Northeast China. Front Microbiol 2022; 12:802213. [PMID: 35003032 PMCID: PMC8739994 DOI: 10.3389/fmicb.2021.802213] [Citation(s) in RCA: 9] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/26/2021] [Accepted: 12/07/2021] [Indexed: 11/26/2022] Open
Abstract
As a buffer layer for the energy and water exchange between atmosphere and permafrost, the active layer is sensitive to climate warming. Changes in the thermal state in active layer can alter soil organic carbon (SOC) dynamics. It is critical to identify the response of soil microbial communities to warming to better predict the regional carbon cycle under the background of global warming. Here, the active layer soils collected from a wetland-forest ecotone in the continuous permafrost region of Northeastern China were incubated at 5 and 15°C for 45 days. High-throughput sequencing of the 16S rRNA gene was used to examine the response of bacterial community structure to experimental warming. A total of 4148 OTUs were identified, which followed the order 15°C > 5°C > pre-incubated. Incubation temperature, soil layer and their interaction have significant effects on bacterial alpha diversity (Chao index). Bacterial communities under different temperature were clearly distinguished. Chloroflexi, Actinobacteria, Proteobacteria, and Acidobacteria accounted for more than 80% of the community abundance at the phylum level. Warming decreased the relative abundance of Chloroflexi and Acidobacteria, while Actinobacteria and Proteobacteria exhibited increasing trend. At family level, the abundance of norank_o__norank_c__AD3 and Ktedonobacteraceae decreased significantly with the increase of temperature, while Micrococcaccac increased. In addition, the amount of SOC mineralization were positively correlated with the relative abundances of most bacterial phyla and SOC content. SOC content was positively correlated with the relative abundance of most bacterial phyla. Results indicate that the SOC content was the primary explanatory variable and driver of microbial regulation for SOC mineralization. Our results provide a new perspective for understanding the microbial mechanisms that accelerates SOC decomposition under warming conditions in the forest-wetland ecotone of permafrost region.
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Affiliation(s)
- Xingfeng Dong
- Heilongjiang Province Key Laboratory of Geographical Environment Monitoring and Spatial Information Service in Cold Regions, Harbin Normal University, Harbin, China.,Heilongjiang Province Collaborative Innovation Center of Cold Region Ecological Safety, Harbin, China
| | - Chao Liu
- Heilongjiang Province Key Laboratory of Geographical Environment Monitoring and Spatial Information Service in Cold Regions, Harbin Normal University, Harbin, China.,Heilongjiang Province Collaborative Innovation Center of Cold Region Ecological Safety, Harbin, China
| | - Dalong Ma
- Heilongjiang Province Key Laboratory of Geographical Environment Monitoring and Spatial Information Service in Cold Regions, Harbin Normal University, Harbin, China.,Heilongjiang Province Collaborative Innovation Center of Cold Region Ecological Safety, Harbin, China
| | - Yufei Wu
- Heilongjiang Province Key Laboratory of Geographical Environment Monitoring and Spatial Information Service in Cold Regions, Harbin Normal University, Harbin, China.,Heilongjiang Province Collaborative Innovation Center of Cold Region Ecological Safety, Harbin, China
| | - Haoran Man
- Heilongjiang Province Key Laboratory of Geographical Environment Monitoring and Spatial Information Service in Cold Regions, Harbin Normal University, Harbin, China.,Heilongjiang Province Collaborative Innovation Center of Cold Region Ecological Safety, Harbin, China
| | - Xiangwen Wu
- Heilongjiang Province Key Laboratory of Geographical Environment Monitoring and Spatial Information Service in Cold Regions, Harbin Normal University, Harbin, China.,Heilongjiang Province Collaborative Innovation Center of Cold Region Ecological Safety, Harbin, China
| | - Miao Li
- Heilongjiang Province Key Laboratory of Geographical Environment Monitoring and Spatial Information Service in Cold Regions, Harbin Normal University, Harbin, China.,Heilongjiang Province Collaborative Innovation Center of Cold Region Ecological Safety, Harbin, China
| | - Shuying Zang
- Heilongjiang Province Key Laboratory of Geographical Environment Monitoring and Spatial Information Service in Cold Regions, Harbin Normal University, Harbin, China.,Heilongjiang Province Collaborative Innovation Center of Cold Region Ecological Safety, Harbin, China
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28
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Zhang P, Luan M, Li X, Lian Z, Zhao X. The distribution of soil fungal communities along an altitudinal gradient in an alpine meadow. Glob Ecol Conserv 2021. [DOI: 10.1016/j.gecco.2021.e01838] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022] Open
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29
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Chen J, Huang X, Tong B, Wang D, Liu J, Liao X, Sun Q. Effects of rhizosphere fungi on the chemical composition of fruits of the medicinal plant Cinnamomum migao endemic to southwestern China. BMC Microbiol 2021; 21:206. [PMID: 34229615 PMCID: PMC8259389 DOI: 10.1186/s12866-021-02216-z] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/05/2020] [Accepted: 05/05/2021] [Indexed: 11/10/2022] Open
Abstract
BACKGROUND This study examined how rhizosphere fungi influence the accumulation of chemical components in fruits of a small population species of Cinnamomum migao. RESULTS Ascomycota and Basidiomycota were dominant in the rhizosphere fungal community of C. migao. Pestalotiopsis and Gibellulopsis were associated with α-Terpineol and sabinene content, and Gibellulopsis was associated with crude fat and carbohydrate content. There were significant differences in rhizosphere fungal populations between watersheds, and there was no obvious change between fruiting periods. Gibberella, Ilyonectria, Micropsalliota, and Geminibasidium promoted sabinene accumulation, and Clitocybula promoted α-Terpineol accumulation. CONCLUSION The climate-related differentiation of rhizosphere fungal communities in watershed areas is the main driver of the chemical composition of C. migao fruit. The control of the production of biologically active compounds by the rhizosphere fungal community provides new opportunities to increase the industrial and medicinal value of the fruit of C. migao.
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Affiliation(s)
- Jingzhong Chen
- Forest Ecology Research Center, College of Forestry, Guizhou University, Guiyang, 550025, Guihzou Province, China
| | - Xiaolong Huang
- Forest Ecology Research Center, College of Forestry, Guizhou University, Guiyang, 550025, Guihzou Province, China
| | - Bingli Tong
- Forest Ecology Research Center, College of Forestry, Guizhou University, Guiyang, 550025, Guihzou Province, China
| | - Deng Wang
- Forest Ecology Research Center, College of Forestry, Guizhou University, Guiyang, 550025, Guihzou Province, China
| | - Jiming Liu
- Forest Ecology Research Center, College of Forestry, Guizhou University, Guiyang, 550025, Guihzou Province, China.
| | - Xiaofeng Liao
- Guizhou province Institute of Mountain Resources, Guiyang, 550025, China
| | - Qingwen Sun
- College of Pharmacy, Guizhou University of Traditional Chinese Medicine, Guiyang, 550025, China
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30
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Donhauser J, Qi W, Bergk-Pinto B, Frey B. High temperatures enhance the microbial genetic potential to recycle C and N from necromass in high-mountain soils. GLOBAL CHANGE BIOLOGY 2021; 27:1365-1386. [PMID: 33336444 DOI: 10.1111/gcb.15492] [Citation(s) in RCA: 25] [Impact Index Per Article: 8.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/26/2020] [Revised: 11/28/2020] [Accepted: 12/08/2020] [Indexed: 06/12/2023]
Abstract
Climate change is strongly affecting high-mountain soils and warming in particular is associated with pronounced changes in microbe-mediated C and N cycling, affecting plant-soil interactions and greenhouse gas balances and therefore feedbacks to global warming. We used shotgun metagenomics to assess changes in microbial community structures, as well as changes in microbial C- and N-cycling potential and stress response genes and we linked these data with changes in soil C and N pools and temperature-dependent measurements of bacterial growth rates. We did so by incubating high-elevation soil from the Swiss Alps at 4°C, 15°C, 25°C, or 35°C for 1 month. We found no shift with increasing temperature in the C-substrate-degrader community towards taxa more capable of degrading recalcitrant organic matter. Conversely, at 35°C, we found an increase in genes associated with the degradation and modification of microbial cell walls, together with high bacterial growth rates. Together, these findings suggest that the rapidly growing high-temperature community is fueled by necromass from heat-sensitive taxa. This interpretation was further supported by a shift in the microbial N-cycling potential towards N mineralization and assimilation under higher temperatures, along with reduced potential for conversions among inorganic N forms. Microbial stress-response genes reacted inconsistently to increasing temperature, suggesting that the high-temperature community was not severely stressed by these conditions. Rather, soil microbes were able to acclimate by changing the thermal properties of membranes and cell walls as indicated by an increase in genes involved in membrane and cell wall modifications as well as a shift in the optimum temperature for bacterial growth towards the treatment temperature. Overall, our results suggest that high temperatures, as they may occur with heat waves under global warming, promote a highly active microbial community capable of rapid mineralization of microbial necromass, which may transiently amplify warming effects.
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Affiliation(s)
- Jonathan Donhauser
- Rhizosphere Processes Group, Swiss Federal Institute for Forest, Snow and Landscape Research WSL, Birmensdorf, Switzerland
| | - Weihong Qi
- Functional Genomics Center Zurich, ETH Zurich/University of Zurich, Zurich, Switzerland
| | - Benoît Bergk-Pinto
- Environmental Microbial Genomics, Laboratoire Ampère, École Centrale de Lyon, Université de Lyon, Ecully, France
| | - Beat Frey
- Rhizosphere Processes Group, Swiss Federal Institute for Forest, Snow and Landscape Research WSL, Birmensdorf, Switzerland
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31
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Respiration characteristics and its responses to hydrothermal seasonal changes in reconstructed soils. Sci Rep 2021; 11:144. [PMID: 33420307 PMCID: PMC7794520 DOI: 10.1038/s41598-020-80623-4] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/17/2020] [Accepted: 12/17/2020] [Indexed: 01/29/2023] Open
Abstract
Seasonal changes in respiration and the components of four reconstructed soils (gravel + meteorite + lou; gravel + shale + lou; gravel + sand + lou; and gravel + soft rock + lou) in barren gravel land were monitored using the soil carbon flux measurement system. The results showed that (1) the monthly average respiration rate and the rates of the components in the four reconstructed soils were the highest in summer and lowest in winter. In winter, the monthly average respiration rates of the four reconstructed soils were not different (p > 0.05). In summer, the monthly average respiration rate of the sand or meteorite reconstructed soil was different from that of the other three (p < 0.05). (2) The heterotrophic and autotrophic respiration rates were different between the four reconstructed soils (p < 0.05). The contribution of heterotrophic respiration to total respiration in the four reconstructed soils was greater than that of autotrophic respiration throughout the year. In winter, autotrophic respiration accounts for the smallest proportion of total respiration. As the temperature rises, the proportion of autotrophic respiration to total respiration gradually increases and peaks in summer. In summer, the proportion of heterotrophic respiration in the total respiration is the smallest. With the decrease in temperature, the proportion of heterotrophic respiration in total respiration gradually increases and peaks in winter. (3) The maximum and minimum values of the monthly average respiration rate of the four reconstructed soils coincided with the months of maximum and minimum soil temperature. The soil volumetric water content changed with the amount of precipitation. The correlation between soil respiration and temperature was greater than that between soil respiration and volumetric water content. (4) The correlation in seasonal variation between respiration of the four remodelled soils and hydrothermal factors in the study area can be characterised by an exponential function and power-exponential function.
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32
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Ma Y, Tian L, Qu G, Li R, Wang W, Zhao J. Precipitation Alters the Effects of Temperature on the Ecosystem Multifunctionality in Alpine Meadows. FRONTIERS IN PLANT SCIENCE 2021; 12:824296. [PMID: 35222457 PMCID: PMC8864076 DOI: 10.3389/fpls.2021.824296] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/29/2021] [Accepted: 12/27/2021] [Indexed: 05/17/2023]
Abstract
Precipitation and temperature are major controls on multiple ecosystem functions in alpine grasslands. There is scant evidence for the interactive effects of temperature and precipitation changes on the ecosystem multifunctionality (EMF) in alpine meadows. To explore the interactive effects of temperature and precipitation changes on the EMF in alpine meadows, we transplanted meadow blocks reciprocally among three altitudes (4,650, 4,950, and 5,200 m) on the central Tibetan Plateau. Compared with the home sites (control), the EMF has a trend to increase when meadow blocks were downward transplanted (experimental warming) to the high-precipitation sites but decrease as meadow blocks were downward transplanted to the low-precipitation sites. However, the experimental cooling (upward transplantation) consistently reduced the EMF regardless of the precipitation change. The increase of EMF under the experimental warming was closely related to the variation of both plant and soil functions, whereas the reduction of EMF under the cooling was highly correlated with the decrease of plant function. Our results highlight that climate warming effects on the EMF are greatly associated with precipitation changes in the semi-arid alpine ecosystems.
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Affiliation(s)
- Yunhe Ma
- State Key Laboratory of Grassland Agro-Ecosystems, Institute of Innovation Ecology and College of Life Sciences, Lanzhou University, Lanzhou, China
- State Key Laboratory of Hulless Barley and Yak Germplasm Resources and Genetic Improvement, Grassland Science Institute, Tibet Academy of Agricultural and Animal Husbandry Sciences, Lhasa, China
| | - Lihua Tian
- Institute of Qinghai-Tibetan Plateau, Southwest Minzu University, Chengdu, China
| | - Guangpeng Qu
- State Key Laboratory of Hulless Barley and Yak Germplasm Resources and Genetic Improvement, Grassland Science Institute, Tibet Academy of Agricultural and Animal Husbandry Sciences, Lhasa, China
| | - Ruicheng Li
- Key Laboratory for Earth Surface Processes of the Ministry of Education, Department of Ecology, College of Urban and Environmental Sciences, Peking University, Beijing, China
| | - Weiwei Wang
- Key Laboratory of Plateau Mountain Animal Genetics, Breeding and Reproduction, Ministry of Education, College of Animal Science, Guizhou University, Guiyang, China
| | - Jingxue Zhao
- State Key Laboratory of Grassland Agro-Ecosystems, Institute of Innovation Ecology and College of Life Sciences, Lanzhou University, Lanzhou, China
- State Key Laboratory of Hulless Barley and Yak Germplasm Resources and Genetic Improvement, Grassland Science Institute, Tibet Academy of Agricultural and Animal Husbandry Sciences, Lhasa, China
- *Correspondence: Jingxue Zhao
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33
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Fang C, Ke W, Campioli M, Pei J, Yuan Z, Song X, Ye J, Li F, Janssens IA. Unaltered soil microbial community composition, but decreased metabolic activity in a semiarid grassland after two years of passive experimental warming. Ecol Evol 2020; 10:12327-12340. [PMID: 33209291 PMCID: PMC7664004 DOI: 10.1002/ece3.6862] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/14/2019] [Revised: 09/04/2020] [Accepted: 09/07/2020] [Indexed: 11/25/2022] Open
Abstract
Soil microbial communities regulate soil carbon feedbacks to climate warming through microbial respiration (i.e., metabolic rate). A thorough understanding of the responses of composition, biomass, and metabolic rate of soil microbial community to warming is crucial to predict soil carbon stocks in a future warmer climate. Therefore, we conducted a field manipulative experiment in a semiarid grassland on the Loess Plateau of China to evaluate the responses of the soil microbial community to increased temperature from April 2015 to December 2017. Soil temperature was 2.0°C higher relative to the ambient when open-top chambers (OTCs) were used. Warming did not affect microbial biomass or the composition of microbial functional groups. However, warming significantly decreased microbial respiration, directly resulting from soil pH decrease driven by the comediation of aboveground biomass increase, inorganic nitrogen increase, and moisture decrease. These findings highlight that the soil microbial community structure of semiarid grasslands resisted the short-term warming by 2°C, although its metabolic rate declined.
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Affiliation(s)
- Chao Fang
- Institute of EcologySchool of Applied MeteorologyNanjing University of Information Science and TechnologyNanjingChina
- State Key Laboratory of Grassland Agro‐ecosystemsInstitute of Arid AgroecologySchool of Life SciencesLanzhou UniversityLanzhouChina
- PLECO (Plants and Ecosystems)Department of BiologyUniversity of AntwerpWilrijkBelgium
| | - Wenbin Ke
- State Key Laboratory of Grassland Agro‐ecosystemsInstitute of Arid AgroecologySchool of Life SciencesLanzhou UniversityLanzhouChina
| | - Matteo Campioli
- PLECO (Plants and Ecosystems)Department of BiologyUniversity of AntwerpWilrijkBelgium
| | - Jiuying Pei
- State Key Laboratory of Grassland Agro‐ecosystemsInstitute of Arid AgroecologySchool of Life SciencesLanzhou UniversityLanzhouChina
| | - Ziqiang Yuan
- State Key Laboratory of Frozen Soil EngineeringNorthwest Institute of Eco‐Environment and ResourcesChinese Academy of ScienceLanzhouChina
| | - Xin Song
- State Key Laboratory of Grassland Agro‐ecosystemsInstitute of Arid AgroecologySchool of Life SciencesLanzhou UniversityLanzhouChina
| | - Jian‐Sheng Ye
- State Key Laboratory of Grassland Agro‐ecosystemsInstitute of Arid AgroecologySchool of Life SciencesLanzhou UniversityLanzhouChina
| | - Fengmin Li
- State Key Laboratory of Grassland Agro‐ecosystemsInstitute of Arid AgroecologySchool of Life SciencesLanzhou UniversityLanzhouChina
| | - Ivan A. Janssens
- PLECO (Plants and Ecosystems)Department of BiologyUniversity of AntwerpWilrijkBelgium
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Zhu J, Zhang Y, Yang X, Chen N, Jiang L. Synergistic effects of nitrogen and CO 2 enrichment on alpine grassland biomass and community structure. THE NEW PHYTOLOGIST 2020; 228:1283-1294. [PMID: 32574402 DOI: 10.1111/nph.16767] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/01/2019] [Accepted: 06/15/2020] [Indexed: 06/11/2023]
Abstract
Global environmental change is altering the Earth's ecosystems. However, much research has focused on ecosystem-level responses, and we know substantially less about community-level responses to global change stressors. Here we conducted a 6-yr field experiment in a high-altitude (4600 m asl) alpine grassland on the Tibetan Plateau to explore the effects of nitrogen (N) addition and rising atmospheric CO2 concentration on plant communities. Our results showed that N and CO2 enrichment had synergistic effects on alpine grassland communities. Adding nitrogen or CO2 alone did not alter total community biomass, species diversity or community composition, whereas adding both resources together increased community biomass, reduced species diversity and altered community composition. The observed decline in species diversity under simultaneous N and CO2 enrichment was associated with greater community biomass and lower soil water content, and driven by the loss of species characterised simultaneously by tall stature and small specific leaf area. Our findings point to the co-limitation of alpine plant community biomass and structure by nitrogen and CO2 , emphasising the need for future studies to consider multiple aspects of global environmental change together to gain a more complete understanding of their ecological consequences.
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Affiliation(s)
- Juntao Zhu
- Lhasa Plateau Ecosystem Research Station, Key Laboratory of Ecosystem Network Observation and Modeling, Institute of Geographic Sciences and Natural Resources Research, Chinese Academy of Sciences, Beijing, 100101, China
- School of Biological Sciences, Georgia Institute of Technology, Atlanta, GA, 30332, USA
| | - Yangjian Zhang
- Lhasa Plateau Ecosystem Research Station, Key Laboratory of Ecosystem Network Observation and Modeling, Institute of Geographic Sciences and Natural Resources Research, Chinese Academy of Sciences, Beijing, 100101, China
- CAS Center for Excellence in Tibetan Plateau Earth Sciences, Beijing, 100101, China
- College of Resources and Environment, University of Chinese Academy of Sciences, Beijing, 100190, China
| | - Xian Yang
- School of Biological Sciences, Georgia Institute of Technology, Atlanta, GA, 30332, USA
| | - Ning Chen
- Lhasa Plateau Ecosystem Research Station, Key Laboratory of Ecosystem Network Observation and Modeling, Institute of Geographic Sciences and Natural Resources Research, Chinese Academy of Sciences, Beijing, 100101, China
| | - Lin Jiang
- School of Biological Sciences, Georgia Institute of Technology, Atlanta, GA, 30332, USA
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Response of Soil Microbial Communities to Warming and Clipping in Alpine Meadows in Northern Tibet. SUSTAINABILITY 2020. [DOI: 10.3390/su12145617] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
In order to explore responses of soil microbial communities among different alpine meadows under warming and clipping, soil microorganisms of three alpine meadow sites (low altitude: 4313 m, alpine steppe meadow, 30°30′ N, 91°04′ E; mid-altitude: 4513 m, alpine steppe meadow, 30°31′ N, 91°04′ E; and high altitude: 4693, alpine Kobresia meadow, 30°32′ N, 91°03′ E) were measured using the phospholipid fatty acid (PLFA) method. Both warming and clipping significantly reduced PLFA content and changed the community composition of soil microbial taxa, which belong to bacterial and fungal communities in the alpine Kobresia meadow. Warming significantly reduced the soil total PLFA content by 36.1% and the content of soil fungi by 37.0%; the clipping significantly reduced the soil total PLFA content by 57.4%, the content of soil fungi by 49.9%, and the content of soil bacteria by 60.5% in the alpine Kobresia meadow. Only clipping changed the total fungal community composition at a low altitude. Neither clipping nor warming changed the microbial community composition at a moderate altitude. Soil temperature, soil moisture, and pH were the main factors affecting soil microbial communities. Therefore, the effects of warming and clipping on soil microbial communities in alpine meadows were related to grassland types and soil environmental conditions.
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Lei N, Han J. Effect of precipitation on respiration of different reconstructed soils. Sci Rep 2020; 10:7328. [PMID: 32355174 PMCID: PMC7193616 DOI: 10.1038/s41598-020-63420-x] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/03/2019] [Accepted: 03/30/2020] [Indexed: 11/17/2022] Open
Abstract
Respiration and hydrothermal characteristics of four reconstructed soils in barren gravel land at a site in Shaanxi Province were monitored before, during, and after two precipitation events. Both precipitation events significantly reduced soil temperature but there were great fluctuations in temperature after the second precipitation event. Moreover, precipitation increased the moisture content of the reconstructed soils. Before the first precipitation event, the soil volumetric water content was relatively stable, while it gradually decreased before the second precipitation event. The first precipitation event significantly stimulated the respiration rate for all reconstructed soils, while the second precipitation event generally inhibited it, especially during the precipitation event. The key factors influencing respiration for different reconstructed soils were different between the precipitation events. When soil volumetric water content showed persistent variation before precipitation, soil moisture was the most influential factor. In contrast, if water content was stable, soil temperature was more influential. Soil moisture and temperature jointly influenced soil respiration before, during, and after the precipitation event, while soil moisture was always the most influential factor after precipitation.
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Affiliation(s)
- Na Lei
- Shaanxi Provincial Land and Engineering Construction Group CO., LTD., No.7 Guangtai Road, Xi'an, Shaanxi Province, China.,Institute of Soil and Water Conservation, State Key Laboratory of Soil Erosion and Dryland Farming on the Loess Plateau, Northwest A&F University, No.3 Taicheng Road, Yangling, Shaanxi Province, China
| | - Jichang Han
- Shaanxi Provincial Land and Engineering Construction Group CO., LTD., No.7 Guangtai Road, Xi'an, Shaanxi Province, China.
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Peng Q, Chen Y, Ding L, Zhao Z, Yan P, Storey KB, Shi H, Hong M. Early-life intestinal microbiome in Trachemys scripta elegans analyzed using 16S rRNA sequencing. PeerJ 2020; 8:e8501. [PMID: 32071814 PMCID: PMC7007735 DOI: 10.7717/peerj.8501] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/02/2019] [Accepted: 01/01/2020] [Indexed: 12/15/2022] Open
Abstract
During the early-life period, the hatchlings of red-eared slider turtles (Trachemys scripta elegans) rely on their own post-hatching internal yolk for several days before beginning to feed. The gut microbiome is critical for the adaptation of organisms to new environments, but, to date, how the microbiome taxa are assembled during early life of the turtle is unknown. In this study, the intestinal microbiome of red-eared slider hatchlings (fed on commercial particle food) was systematically analyzed at four different growth stages (0 d, 10 d, 20 d, 30 d) by a high-throughput sequencing approach. Results showed that the dominant phyla were Firmicutes (58.23%) and Proteobacteria (41.42%) at 0-day, Firmicutes (92.94%) at 10-day, Firmicutes (67.08%) and Bacteroidetes (27.17%) at 20-day, and Firmicutes (56.46%), Bacteroidetes (22.55%) and Proteobacteria (20.66%) at 30-day post-hatching. Members of the Bacteroidaceae family were absent in 0-day and 10-day turtles, but dominated in 20-day and 30-day turtles. The abundance of Clostridium also showed the highest value in 10-day turtles. The richness of the intestinal microbiomes was lower at 0-day and 30-day than that at 10-day and 20-day, while the diversity was higher at 10-day and 30-day than that at 0-day and 20-day. The results endowed the turtles with an ability to enhance their tolerance to the environment.
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Affiliation(s)
- Qin Peng
- Ministry of Education Key Laboratory for Ecology of Tropical Islands, College of Life Sciences, Hainan Normal University, Haikou, Hainan, China
| | - Yahui Chen
- Ministry of Education Key Laboratory for Ecology of Tropical Islands, College of Life Sciences, Hainan Normal University, Haikou, Hainan, China
| | - Li Ding
- Ministry of Education Key Laboratory for Ecology of Tropical Islands, College of Life Sciences, Hainan Normal University, Haikou, Hainan, China
| | - Zimiao Zhao
- Ministry of Education Key Laboratory for Ecology of Tropical Islands, College of Life Sciences, Hainan Normal University, Haikou, Hainan, China
| | - Peiyu Yan
- Ministry of Education Key Laboratory for Ecology of Tropical Islands, College of Life Sciences, Hainan Normal University, Haikou, Hainan, China
| | | | - Haitao Shi
- Ministry of Education Key Laboratory for Ecology of Tropical Islands, College of Life Sciences, Hainan Normal University, Haikou, Hainan, China
| | - Meiling Hong
- Ministry of Education Key Laboratory for Ecology of Tropical Islands, College of Life Sciences, Hainan Normal University, Haikou, Hainan, China
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Birnbaum C, Hopkins AJM, Fontaine JB, Enright NJ. Soil fungal responses to experimental warming and drying in a Mediterranean shrubland. THE SCIENCE OF THE TOTAL ENVIRONMENT 2019; 683:524-536. [PMID: 31146058 DOI: 10.1016/j.scitotenv.2019.05.222] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/23/2019] [Revised: 04/28/2019] [Accepted: 05/15/2019] [Indexed: 06/09/2023]
Abstract
Implications of a drying and warming climate have been investigated for aboveground vegetation across a range of biomes yet below-ground effects on microorganisms have received considerably less attention, especially in Mediterranean Type Ecosystems (MTE) that are predicted to be negatively impacted by climate change. We experimentally reduced rainfall and increased temperature across two contrasting study sites (deep sand dune vs shallow sand swale) to test how projected future climate conditions may impact soil fungal composition, richness and diversity. We also assessed fungal OTU warming responses and putative functions of 100 most abundant OTUs and 120 OTUs that either increased or decreased based on their presence/absence across treatments. We found a significant effect of study site, treatment and canopy species on fungal composition. Soil fungal diversity increased under warming treatment in swale plots as compared to control plots indicating a positive effect of warming on fungal diversity. In dunes, significantly more OTUs responded to drought than warming treatment. Among the most abundant soil fungal putative functional groups were endophytes, ericoid mycorrhizas, yeasts and ectomycorrhizas consistent with previous studies. Plant pathogens were found to increase across dunes and swales, while ericoid mycorrhizae decreased. In summary, our study revealed that it is critical to understand belowground microbial patterns as a result of climate change treatments for our ability to better predict how ecosystems may respond to global environmental changes in the future.
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Affiliation(s)
- Christina Birnbaum
- Environmental and Conservation Sciences, School of Veterinary and Life Sciences, Murdoch University, 90 South Street, Western Australia 6150, Australia.
| | - Anna J M Hopkins
- Environmental and Conservation Sciences, School of Veterinary and Life Sciences, Murdoch University, 90 South Street, Western Australia 6150, Australia; Centre for Ecosystem Management, School of Science, Edith Cowan University, 270 Joondalup Drive, Joondalup, WA 6027, Australia
| | - Joseph B Fontaine
- Environmental and Conservation Sciences, School of Veterinary and Life Sciences, Murdoch University, 90 South Street, Western Australia 6150, Australia
| | - Neal J Enright
- Environmental and Conservation Sciences, School of Veterinary and Life Sciences, Murdoch University, 90 South Street, Western Australia 6150, Australia
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Zhong Z, Zhang G, Zhang H. Impact of diurnal unsymmetrical warming on soil respiration in an agroecological system of the Lhasa region. PLoS One 2019; 14:e0217575. [PMID: 31141568 PMCID: PMC6541288 DOI: 10.1371/journal.pone.0217575] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/13/2019] [Accepted: 05/14/2019] [Indexed: 11/18/2022] Open
Abstract
Purpose The impact of diurnal unsymmetrical rise in temperature on soil respiration (Rs) is not fully understood; thus, we explored such a warming influence on Rs in an agroecological system of the Lhasa. Materials and methods A field warming experiment (C: control; DW: daytime warming; NW: nighttime warming; DW+NW: daytime plus nighttime warming) was carried out in a naked barley ecological system. Results and discussion The DW, NW and DW+NW treatments dramatically increased soil temperature and decreased soil moisture but did not markedly modify Rs. The effects of DW and NW on soil respiration sensitivity (Q10) during the daytime and nighttime were different; they had no effects on daytime Q10 of Rs, but a significant inhibitory effect on nighttime Q10 of Rs. Conclusions A diurnal unsymmetrical rise in temperature brought about different results for the Q10 of Rs but did not cause changes in Rs under different experimental treatments in agroecological systems of the Lhasa.
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Affiliation(s)
- Zhiming Zhong
- Lhasa Plateau Ecosystem Research Station, Key Laboratory of Ecosystem Network Observation and Modeling, Institute of Geographic Sciences and Natural Resources Research, Chinese Academy of Sciences, Beijing, China
| | - Guangyu Zhang
- Lhasa Plateau Ecosystem Research Station, Key Laboratory of Ecosystem Network Observation and Modeling, Institute of Geographic Sciences and Natural Resources Research, Chinese Academy of Sciences, Beijing, China
- University of Chinese Academy of Sciences, Beijing, China
| | - Haorui Zhang
- Lhasa Plateau Ecosystem Research Station, Key Laboratory of Ecosystem Network Observation and Modeling, Institute of Geographic Sciences and Natural Resources Research, Chinese Academy of Sciences, Beijing, China
- University of Chinese Academy of Sciences, Beijing, China
- * E-mail:
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Li Z, Gao J, Wen L, Zou C, Feng C, Li D, Xu D. Dynamics of Soil Respiration in Alpine Wetland Meadows Exposed to Different Levels of Degradation in the Qinghai-Tibet Plateau, China. Sci Rep 2019; 9:7469. [PMID: 31097739 PMCID: PMC6522552 DOI: 10.1038/s41598-019-43904-1] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/18/2018] [Accepted: 04/27/2019] [Indexed: 11/21/2022] Open
Abstract
The effects of degradation of alpine wetland meadow on soil respiration (Rs) and the sensitivity of Rs to temperature (Q10) were measured in the Napa Lake region of Shangri-La on the southeastern edge of the Qinghai-Tibet Plateau. Rs was measured for 24 h during each of three different stages of the growing season on four different degraded levels. The results showed: (1) peak Rs occurred at around 5:00 p.m., regardless of the degree of degradation and growing season stage, with the maximum Rs reaching 10.05 μmol·m-2·s-1 in non-degraded meadows rather than other meadows; (2) the daily mean Rs value was 7.14-7.86 μmol·m-2·s-1 during the mid growing season in non-degraded meadows, and declined by 48.4-62.6% when degradation increased to the severely degraded level; (3) Q10 ranged from 7.1-11.3 in non-degraded meadows during the mid growing season, 5.5-8.0 and 6.2-8.2 during the early and late growing seasons, respectively, and show a decline of about 50% from the non-degraded meadows to severely degraded meadows; (4) Rs was correlated significantly with soil temperature at a depth of 0-5 cm (p < 0.05) on the diurnal scale, but not at the seasonal scale; (5) significant correlations were found between Rs and soil organic carbon (SOC), between biomass and SOC, and between Q10 and Rs (p < 0.05), which indicates that biomass and SOC potentially impact Q10. The results suggest that vegetation degradation impact both Rs and Q10 significantly. Also, we speculated that Q10 of alpine wetland meadow is probable greater at the boundary region than inner region of the Qinghai-Tibet Plateau, and shoule be a more sensitive indicator in the studying of climate change in this zone.
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Affiliation(s)
- Zhongfei Li
- College of Ecology and Environment, Southwest Forestry University, Kunming, 650224, Yunnan, China
- Nanjing Institute of Environmental Sciences, Ministry of Ecology and Environment, Nanjing, 210042, Jiangsu, China
| | - Jixi Gao
- Nanjing Institute of Environmental Sciences, Ministry of Ecology and Environment, Nanjing, 210042, Jiangsu, China.
| | - Linqin Wen
- College of Ecology and Environment, Southwest Forestry University, Kunming, 650224, Yunnan, China
| | - Changxin Zou
- Nanjing Institute of Environmental Sciences, Ministry of Ecology and Environment, Nanjing, 210042, Jiangsu, China
| | - Chaoyang Feng
- Chinese Research Academy of Environmental Sciences, Beijing, 100012, China
- State Environmental Protection Key Laboratory of Regional Eco-process and Function Assessment, Beijing, 100012, China
| | - Daiqing Li
- Chinese Research Academy of Environmental Sciences, Beijing, 100012, China
- State Environmental Protection Key Laboratory of Regional Eco-process and Function Assessment, Beijing, 100012, China
| | - Delin Xu
- Nanjing Institute of Environmental Sciences, Ministry of Ecology and Environment, Nanjing, 210042, Jiangsu, China
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