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Cui JQ, He ZQ, Chen K, Ntakirutimana S, Liu ZH, Bai H, Li BZ, Yuan YJ. Lignin-derived compounds assisted with Kocuria marina H-2 and Pseudomonas putida B6-2 co-culture enhanced naphthalene biodegradation. BIORESOURCE TECHNOLOGY 2024; 413:131512. [PMID: 39307473 DOI: 10.1016/j.biortech.2024.131512] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/23/2024] [Revised: 09/10/2024] [Accepted: 09/19/2024] [Indexed: 09/27/2024]
Abstract
The implementation of environmentally friendly and sustainable remediation strategies positively impacts solid waste management. In this study, the Kocuria marina H-2 and Pseudomonas putida B6-2 co-culture system demonstrated enhanced naphthalene biodegradation efficiency compared to single-strain cultures. Under optimal conditions of 35 °C, 200 rpm/min, and a 1:1 ratio of the co-culture system, the naphthalene biodegradation potential was further increased. Notably, the addition of both ethylenediamine-pretreated lignin and p-hydroxybenzoic acid significantly elevated naphthalene degradation rates to 68.5 %. In addition, the oil-liquid surface tension decreased, while cell surface hydrophobicity and colony-forming units increased with the addition of lignin-derived compounds. The modification of naphthalene bioavailability by ethylenediamine-pretreated lignin would accelerate the uptake and transport of hydrocarbons via ABC transporters and flagellar assembly. Importantly, genes related to bacterial chemotaxis and fatty acid biosynthesis were upregulated during the co-metabolism of naphthalene and p-hydroxybenzoic acid, further enhancing naphthalene bioconversion.
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Affiliation(s)
- Jia-Qi Cui
- Frontiers Science Center for Synthetic Biology and Key Laboratory of Systems Bioengineering (Ministry of Education), School of Chemical Engineering and Technology, Tianjin University, Tianjin 300072, China; Frontiers Research Institute for Synthetic Biology, Tianjin University, China
| | - Zhi-Qiang He
- Frontiers Science Center for Synthetic Biology and Key Laboratory of Systems Bioengineering (Ministry of Education), School of Chemical Engineering and Technology, Tianjin University, Tianjin 300072, China; Frontiers Research Institute for Synthetic Biology, Tianjin University, China
| | - Kai Chen
- Frontiers Science Center for Synthetic Biology and Key Laboratory of Systems Bioengineering (Ministry of Education), School of Chemical Engineering and Technology, Tianjin University, Tianjin 300072, China; Frontiers Research Institute for Synthetic Biology, Tianjin University, China
| | - Samuel Ntakirutimana
- Frontiers Science Center for Synthetic Biology and Key Laboratory of Systems Bioengineering (Ministry of Education), School of Chemical Engineering and Technology, Tianjin University, Tianjin 300072, China; Frontiers Research Institute for Synthetic Biology, Tianjin University, China
| | - Zhi-Hua Liu
- Frontiers Science Center for Synthetic Biology and Key Laboratory of Systems Bioengineering (Ministry of Education), School of Chemical Engineering and Technology, Tianjin University, Tianjin 300072, China; Frontiers Research Institute for Synthetic Biology, Tianjin University, China
| | - He Bai
- Tianjin Huakan Environmental Protection Technol Co., Ltd, Tianjin 300170, China.
| | - Bing-Zhi Li
- Frontiers Science Center for Synthetic Biology and Key Laboratory of Systems Bioengineering (Ministry of Education), School of Chemical Engineering and Technology, Tianjin University, Tianjin 300072, China; Frontiers Research Institute for Synthetic Biology, Tianjin University, China.
| | - Ying-Jin Yuan
- Frontiers Science Center for Synthetic Biology and Key Laboratory of Systems Bioengineering (Ministry of Education), School of Chemical Engineering and Technology, Tianjin University, Tianjin 300072, China; Frontiers Research Institute for Synthetic Biology, Tianjin University, China
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Davletgildeeva AT, Kuznetsov NA. Bioremediation of Polycyclic Aromatic Hydrocarbons by Means of Bacteria and Bacterial Enzymes. Microorganisms 2024; 12:1814. [PMID: 39338488 PMCID: PMC11434427 DOI: 10.3390/microorganisms12091814] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/12/2024] [Revised: 08/29/2024] [Accepted: 08/30/2024] [Indexed: 09/30/2024] Open
Abstract
Polycyclic aromatic hydrocarbons (PAHs) are widespread, persistent, and toxic environmental pollutants. Many anthropogenic and some natural factors contribute to the spread and accumulation of PAHs in aquatic and soil systems. The effective and environmentally friendly remediation of these chemical compounds is an important and challenging problem that has kept scientists busy over the last few decades. This review briefly summarizes data on the main sources of PAHs, their toxicity to living organisms, and physical and chemical approaches to the remediation of PAHs. The basic idea behind existing approaches to the bioremediation of PAHs is outlined with an emphasis on a detailed description of the use of bacterial strains as individual isolates, consortia, or cell-free enzymatic agents.
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Affiliation(s)
- Anastasiia T. Davletgildeeva
- Institute of Chemical Biology and Fundamental Medicine, Siberian Branch of Russian Academy of Sciences, Novosibirsk 630090, Russia;
| | - Nikita A. Kuznetsov
- Institute of Chemical Biology and Fundamental Medicine, Siberian Branch of Russian Academy of Sciences, Novosibirsk 630090, Russia;
- Department of Natural Sciences, Novosibirsk State University, Novosibirsk 630090, Russia
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Thakur V, Baghmare P, Verma A, Verma JS, Geed SR. Recent progress in microbial biosurfactants production strategies: Applications, technological bottlenecks, and future outlook. BIORESOURCE TECHNOLOGY 2024; 408:131211. [PMID: 39102966 DOI: 10.1016/j.biortech.2024.131211] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/28/2024] [Revised: 07/17/2024] [Accepted: 08/01/2024] [Indexed: 08/07/2024]
Abstract
Biosurfactants are surface-active compounds produced by numerous microorganisms. They have gained significant attention due to their wide applications in food, pharmaceuticals, cosmetics, agriculture, and environmental remediation. The production efficiency and yield of microbial biosurfactants have improved significantly through the development and optimization of different process parameters. This review aims to provide an in-depth analysis of recent trends and developments in microbial biosurfactant production strategies, including submerged, solid-state, and co-culture fermentation. Additionally, review discusses biosurfactants' applications, challenges, and future perspectives. It highlights their advantages over chemical surfactants, emphasizing their biodegradability, low toxicity, and diverse chemical structures. However, the critical challenges in commercializing include high production costs and low yield. Strategies like genetic engineering, process optimization, and downstream processing, have been employed to address these challenges. The review provides insights into current commercial producers and highlights future perspectives such as novel bioprocesses, efficient microbial strains, and exploring their applications in emerging industries.
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Affiliation(s)
- Vishal Thakur
- School of Biotechnology, RGPV Bhopal, Madhya Pradesh, 462033, India; CSIR-North East Institute of Science and Technology, Jorhat, Assam, 785006, India
| | - Pawan Baghmare
- School of Biotechnology, RGPV Bhopal, Madhya Pradesh, 462033, India; CSIR-North East Institute of Science and Technology, Jorhat, Assam, 785006, India
| | - Ashish Verma
- Department of Bioengineering, Integral University, Lucknow 226026, India
| | - Jitendra Singh Verma
- CSIR-North East Institute of Science and Technology, Jorhat, Assam, 785006, India.
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Peng L, Hou J, Zhang Y, Wang B, Zhang Y, Zhao K, Wang Q, Christie P, Liu W, Luo Y. Metagenomic analysis of a thermophilic bacterial consortium and its use in the bioremediation of a petroleum-contaminated soil. CHEMOSPHERE 2024; 360:142379. [PMID: 38777200 DOI: 10.1016/j.chemosphere.2024.142379] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/31/2024] [Revised: 05/16/2024] [Accepted: 05/17/2024] [Indexed: 05/25/2024]
Abstract
Biodegradation is difficult at high temperatures due to the limited capacity of microorganisms to survive and function outside their optimum temperature range. Here, a thermophilic petroleum-degrading consortium was enriched from compost at a temperature of 55 °C. 16S rDNA and metagenomic techniques were used to analyze the composition of the consortium and the mechanisms of degradation. The consortium degraded 17000 mg total petroleum hydrocarbons (TPHs) L-1 with a degradation efficiency of 81.5% in 14 days. The consortium utilized a range of substrates such as n-hexadecane, n-docosane, naphthalene and pyrene and grew well over a wide range of pH (4-10) and salinity (0-90 g L-1). The hydrocarbon-degrading extremophilic consortium contained, inter alia, (relative abundance >1%) Caldibacillus, Geobacillus, Mycolicibacterium, Bacillus, Chelatococcus, and Aeribacillus spp. Metagenomic analysis was conducted to discover the degradation and environmental tolerance functional genes of the consortium. Two alkane hydroxylase genes, alkB and ladA, were found. A microcosm study shows that the consortium promoted the bioremediation of soil TPHs. The results indicate that the consortium may be a good candidate for the high-temperature bioremediation of petroleum-contaminated soils.
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Affiliation(s)
- Li Peng
- School of Environmental Science and Engineering, Nanjing Tech University, Nanjing, 210008, China; State Key Laboratory of Soil and Sustainable Agriculture, Institute of Soil Science, Chinese Academy of Sciences, Nanjing, 210008, China
| | - Jinyu Hou
- State Key Laboratory of Soil and Sustainable Agriculture, Institute of Soil Science, Chinese Academy of Sciences, Nanjing, 210008, China
| | - Yufeng Zhang
- School of Environmental Science and Engineering, Nanjing Tech University, Nanjing, 210008, China
| | - Beibei Wang
- State Key Laboratory of Soil and Sustainable Agriculture, Institute of Soil Science, Chinese Academy of Sciences, Nanjing, 210008, China; University of Chinese Academy of Sciences, Beijing, 100049, China
| | - Yun Zhang
- State Key Laboratory of Soil and Sustainable Agriculture, Institute of Soil Science, Chinese Academy of Sciences, Nanjing, 210008, China; University of Chinese Academy of Sciences, Beijing, 100049, China
| | - Ke Zhao
- State Key Laboratory of Soil and Sustainable Agriculture, Institute of Soil Science, Chinese Academy of Sciences, Nanjing, 210008, China
| | - Qingling Wang
- State Key Laboratory of Soil and Sustainable Agriculture, Institute of Soil Science, Chinese Academy of Sciences, Nanjing, 210008, China; University of Chinese Academy of Sciences, Beijing, 100049, China
| | - Peter Christie
- State Key Laboratory of Soil and Sustainable Agriculture, Institute of Soil Science, Chinese Academy of Sciences, Nanjing, 210008, China
| | - Wuxing Liu
- State Key Laboratory of Soil and Sustainable Agriculture, Institute of Soil Science, Chinese Academy of Sciences, Nanjing, 210008, China.
| | - Yongming Luo
- State Key Laboratory of Soil and Sustainable Agriculture, Institute of Soil Science, Chinese Academy of Sciences, Nanjing, 210008, China
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Aso RE, Obuekwe IS. Polycyclic aromatic hydrocarbon: underpinning the contribution of specialist microbial species to contaminant mitigation in the soil. ENVIRONMENTAL MONITORING AND ASSESSMENT 2024; 196:654. [PMID: 38913190 DOI: 10.1007/s10661-024-12778-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/04/2024] [Accepted: 06/06/2024] [Indexed: 06/25/2024]
Abstract
The persistence of PAHs poses a significant challenge for conventional remediation approaches, necessitating the exploration of alternative, sustainable strategies for their mitigation. This review underscores the vital role of specialized microbial species (nitrogen-fixing, phosphate-solubilizing, and biosurfactant-producing bacteria) in tackling the environmental impact of polycyclic aromatic hydrocarbons (PAHs). These resistant compounds demand innovative remediation strategies. The study explores microbial metabolic capabilities for converting complex PAHs into less harmful byproducts, ensuring sustainable mitigation. Synthesizing literature from 2016 to 2023, it covers PAH characteristics, sources, and associated risks. Degradation mechanisms by bacteria and fungi, key species, and enzymatic processes are examined. Nitrogen-fixing and phosphate-solubilizing bacteria contributions in symbiotic relationships with plants are highlighted. Biosurfactant-producing bacteria enhance PAH solubility, expanding microbial accessibility for degradation. Cutting-edge trends in omics technologies, synthetic biology, genetic engineering, and nano-remediation offer promising avenues. Recommendations emphasize genetic regulation, field-scale studies, sustainability assessments, interdisciplinary collaboration, and knowledge dissemination. These insights pave the way for innovative, sustainable PAH-contaminated environment restoration.
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Affiliation(s)
- Rufus Emamoge Aso
- Department of Microbiology, Faculty of Life Sciences, University of Benin, Benin, Edo State, Nigeria
| | - Ifeyinwa Sarah Obuekwe
- Department of Microbiology, Faculty of Life Sciences, University of Benin, Benin, Edo State, Nigeria.
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Albasri HM, Almohammadi AA, Alhhazmi A, Bukhari DA, Waznah MS, Mawad AMM. Production and characterization of rhamnolipid biosurfactant from thermophilic Geobacillus stearothermophilus bacterium isolated from Uhud mountain. Front Microbiol 2024; 15:1358175. [PMID: 38873141 PMCID: PMC11173098 DOI: 10.3389/fmicb.2024.1358175] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/19/2023] [Accepted: 05/13/2024] [Indexed: 06/15/2024] Open
Abstract
Introduction Biosurfactants have been given considerable attention as they are potential candidates for several biotechnological applications. Materials and methods In this study, a promising thermophilic biosurfactant-producing HA-2 was isolated from the volcanic and arid region of Uhud mountain, Madinah, Saudi Arabia. It was identified using 16S rRNA gene sequence analysis. The biosurfactant production ability was screened using different methods such as the drop collapse test, oil spreading test, hemolytic activity test, CTAB test, and emulsification index. The ability of rhamnolipid production by the tested strain was confirmed by the polymerase chain reaction (PCR) of rhlAB. The affinity of thermophilic HA-2 to hydrophobic substrates was also investigated. Optimization of biosurfactant production was conducted. The biological activities of produced surfactant were investigated. Results and discussion The isolated HA-1 was identified as Geobacillus stearothermophilus strain OR911984. It could utilize waste sunflower frying oil (WSFF) oil as a low-cost carbon source. It showed high emulsification activity (52 ± 0.0%) and positive results toward other biosurfactant screening tests. The strain showed high cell adhesion to hexane with 41.2% cell surface hydrophobicity. Fourier-transform infrared (FTIR) spectra indicated the presence of hydrophobic chains that comprise lipids, sugars, and hydrophilic glycolipid components. The optimization results showed the optimal factors included potato peel as a carbon source with 68.8% emulsification activity, yeast extract as a nitrogen source with 60% emulsification activity, a pH of 9 (56.6%), and a temperature of 50° (72%). The kinetics showed that optimum biosurfactant production (572.4 mg/L) was recorded at 5 days of incubation. The produced rhamnolipid biosurfactant showed high antimicrobial activity against some human and plant pathogenic bacterial and fungal isolates and high antioxidant activity (90.4%). In addition, it enhanced wheat (Triticum aestivum) growth, with the greatest enhancement obtained with the 5% concentration. Therefore, thermophilic G. stearothermophilus is a promising rhamnolipid biosurfactant producer that utilizes many organic wastes. The produced biosurfactant could be applied as a promising emulsifier, antimicrobial, antioxidant, and plant growth promoter.
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Affiliation(s)
- Hibah M. Albasri
- Department of Biology, College of Science, Taibah University, Madinah, Saudi Arabia
| | - Asmaa A. Almohammadi
- Department of Biology, College of Science, Taibah University, Madinah, Saudi Arabia
| | - Areej Alhhazmi
- Clinical Laboratory Sciences Department, College of Applied Medical Sciences, Taibah University, Madinah, Saudi Arabia
| | - Duaa A. Bukhari
- Department of Biology, College of Science, Taibah University, Madinah, Saudi Arabia
| | - Moayad S. Waznah
- Department of Biology, College of Science, Taibah University, Madinah, Saudi Arabia
| | - Asmaa M. M. Mawad
- Department of Biology, College of Science, Taibah University, Madinah, Saudi Arabia
- Botany and Microbiology Department, Faculty of Science, Assiut University, Assiut, Egypt
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7
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Phulpoto IA, Qi Z, Qazi MA, Yu Z. Biosurfactants-based mixed polycyclic aromatic hydrocarbon degradation: From microbial community structure toward non-targeted metabolomic profile determination. ENVIRONMENT INTERNATIONAL 2024; 184:108448. [PMID: 38246038 DOI: 10.1016/j.envint.2024.108448] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/10/2023] [Revised: 12/25/2023] [Accepted: 01/16/2024] [Indexed: 01/23/2024]
Abstract
Biosurfactants-based bioremediation is considered an efficient technology to eliminate environmental pollutants including polycyclic aromatic hydrocarbons (PAHs). However, the precise role of rhamnolipids or lipopeptide-biosurfactants in mixed PAH dissipation, shaping microbial community structure, and influencing metabolomic profile remained unclear. In this study, results showed that the maximum PAH degradation was achieved in lipopeptide-assisted treatment (SPS), where the pyrene and phenanthrene were substantially degraded up to 74.28 % and 63.05 % respectively, as compared to rhamnolipids (SPR) and un-aided biosurfactants (SP). Furthermore, the high throughput sequencing analysis revealed a significant change in the PAH-degrading microbial community, with Proteobacteria being the predominant phylum (>98 %) followed by Bacteroidota and Firmicutes in all the treatments. Moreover, Pseudomonas and Pannonibacter were found as highly potent bacterial genera for mixed PAH degradation in SPR, SPS, and SP treatments, nevertheless, the abundance of the genus Pseudomonas was significantly enhanced (>97 %) in SPR treatment groups. On the other hand, the non-targeted metabolomic profile through UHPLC-MS/MS exhibited a remarkable change in the metabolites of amino acids, carbohydrates, and lipid metabolisms by the input of rhamnolipids or lipopeptide-biosurfactants whereas, the maximum intensities of metabolites (more than two-fold) were observed in SPR treatment. The findings of this study suggested that the aforementioned biosurfactants can play an indispensable role in mixed PAH degradation as well as seek to offer new insights into shifts in PAH-degrading microbial communities and their metabolic function, which can guide the development of more efficient and targeted strategies for complete removal of organic pollutants such as PAH from the contaminated environment.
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Affiliation(s)
- Irfan Ali Phulpoto
- College of Resources and Environment, University of Chinese Academy of Sciences, 19 A Yuquan Road, Beijing 100049, PR China; Binzhou Institute of Technology, Weiqiao-UCAS Science and Technology Park, Binzhou City 256606, Shandong Province, PR China; Institute of Microbiology, Faculty of Natural Science, Shah Abdul Latif University, Khairpur Mir's 66020, Sindh, Pakistan; RCEES-IMCAS-UCAS Joint-Lab of Microbial Technology for Environmental Science, Beijing 100085, PR China
| | - Zhang Qi
- College of Resources and Environment, University of Chinese Academy of Sciences, 19 A Yuquan Road, Beijing 100049, PR China
| | - Muneer Ahmed Qazi
- Institute of Microbiology, Faculty of Natural Science, Shah Abdul Latif University, Khairpur Mir's 66020, Sindh, Pakistan
| | - Zhisheng Yu
- College of Resources and Environment, University of Chinese Academy of Sciences, 19 A Yuquan Road, Beijing 100049, PR China; Binzhou Institute of Technology, Weiqiao-UCAS Science and Technology Park, Binzhou City 256606, Shandong Province, PR China; RCEES-IMCAS-UCAS Joint-Lab of Microbial Technology for Environmental Science, Beijing 100085, PR China.
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Lu J, Liu Y, Zhang R, Hu Z, Xue K, Dong B. Biochar inoculated with Pseudomonas putida alleviates its inhibitory effect on biodegradation pathways in phenanthrene-contaminated soil. JOURNAL OF HAZARDOUS MATERIALS 2024; 461:132550. [PMID: 37729712 DOI: 10.1016/j.jhazmat.2023.132550] [Citation(s) in RCA: 5] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/30/2023] [Revised: 08/23/2023] [Accepted: 09/11/2023] [Indexed: 09/22/2023]
Abstract
Controversial results are reported whereby biodegradation of polycyclic aromatic hydrocarbons (PAHs) can be promoted or inhibited by biochar amendment of soil. Metabolomics was applied to analyze the metabolic profiles of amendment with biochar (BB) and biochar inoculated with functional bacteria (Pseudomonas putida) (BP) involved in phenanthrene (PHE) degradation. Additionally, metagenomic analysis was utilized to assess the impact of different treatments on PHE degradation by soil microorganisms. Results indicated that BB treatment decreased the PHE biodegradation of the soil indigenous bacterial consortium, but BP treatment alleviated this inhibitory effect. Metabolomics revealed the differential metabolite 9-phenanthrol was absent in the BB treatment, but was found in the control group (CK), and in the treatment inoculated with the Pseudomonas putida (Ps) and the BP treatment. Metagenomic analysis showed that biochar decreased the abundance of the cytochrome P450 monooxygenase (CYP116), which was detected in the Pseudomonas putida, thus alleviating the inhibitory effect of biochar on PHE degradation. Moreover, a noticeable delayed increase of functional gene abundance and enzymes abundance in the BB treatment was observed in the PHE degradation pathway. Our findings elucidate the mechanism of inhibition with biochar amendment and the alleviating effect of biochar inoculated with degrading bacteria.
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Affiliation(s)
- Jinfeng Lu
- College of Resources and Environment, University of Chinese Academy of Sciences, Beijing 100049, China; Sino-Danish College, University of Chinese Academy of Sciences, Beijing 100049, China.
| | - Yuexian Liu
- College of Resources and Environment, University of Chinese Academy of Sciences, Beijing 100049, China.
| | - Ruili Zhang
- College of Resources and Environment, University of Chinese Academy of Sciences, Beijing 100049, China.
| | - Zhengyi Hu
- College of Resources and Environment, University of Chinese Academy of Sciences, Beijing 100049, China; Sino-Danish College, University of Chinese Academy of Sciences, Beijing 100049, China.
| | - Kai Xue
- College of Resources and Environment, University of Chinese Academy of Sciences, Beijing 100049, China.
| | - Biya Dong
- College of Resources and Environment, University of Chinese Academy of Sciences, Beijing 100049, China.
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Wang X, Gao J, Gao Y, Zhang L, Xu C, Li Q, Li L, Xue J. Analysis of surfactant production by Bacillus cereus GX7 and optimization of fermentation conditions. Colloids Surf B Biointerfaces 2024; 233:113629. [PMID: 37951187 DOI: 10.1016/j.colsurfb.2023.113629] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/27/2023] [Revised: 08/18/2023] [Accepted: 10/31/2023] [Indexed: 11/13/2023]
Abstract
Although biosurfactants have many advantages compared to chemical surfactants, biosurfactants are still limited by problems such as low yields and high production costs. In the present study, a strain of Bacillus Cereus (GX7) isolated from an oil tank bottom sludge of Shengli Oil Field (China) was selected as a highly effective surfactant producer. The biosurfactant produced by GX7 was extracted, purified, and analyzed by TLC, FT-IR, and LC-MS/MS. The results showed that the biosurfactant was surfactin of lipopeptide surfactant. Single-factor experiments were used to optimize the fermentation process of the strain from two aspects: the composition of the fermentation medium (carbon source, nitrogen source) and the fermentation conditions (temperature, pH, inoculation amount, rotation speed, and fermentation time). The surface tension and emulsification index of the fermentation broth were used to evaluate the optimal fermentation conditions. The results showed that the best carbon and nitrogen sources were glucose and peptone, and the optimum temperature, inoculum amount, pH, rotation speed, and fermentation time were 30 ℃, 1%, 7.5, 150 rpm, and 48 h, respectively. After optimization, the surface tension and emulsification index of fermentation broth were 26.84 mN/m and 57.84%, respectively. Moreover, the results also prove that the biosurfactant produced by this strain has good stability in a wide range of temperature, pH, and salt concentration.
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Affiliation(s)
- Xiaoyan Wang
- College of Safety and Environment Engineering, Shandong University of Science and Technology, Qingdao 266510, China
| | - Jin Gao
- College of Safety and Environment Engineering, Shandong University of Science and Technology, Qingdao 266510, China; Kuiwen Ecological Environment Monitoring Center, Weifang Ecological Environment Bureau Kuiwen Branch, Weifang 261000, China
| | - Yu Gao
- College of Safety and Environment Engineering, Shandong University of Science and Technology, Qingdao 266510, China; Institute of Yellow River Delta Earth Surface Processes and Ecological Integrity, Shandong University of Science and Technology, Shandong University of Science and Technology, Qingdao 266510, China.
| | - Linlin Zhang
- College of Safety and Environment Engineering, Shandong University of Science and Technology, Qingdao 266510, China; Institute of Yellow River Delta Earth Surface Processes and Ecological Integrity, Shandong University of Science and Technology, Shandong University of Science and Technology, Qingdao 266510, China
| | - Congchao Xu
- College of Safety and Environment Engineering, Shandong University of Science and Technology, Qingdao 266510, China; School of Water Resources and Environment, China University of Geosciences, Beijing 100083, China
| | - Qintong Li
- Department of Applied Biosciences, Faculty of Life Sciences, Toyo University, Gunma 3740193, Japan
| | - Lin Li
- College of Safety and Environment Engineering, Shandong University of Science and Technology, Qingdao 266510, China; Institute of Yellow River Delta Earth Surface Processes and Ecological Integrity, Shandong University of Science and Technology, Shandong University of Science and Technology, Qingdao 266510, China
| | - Jianliang Xue
- College of Safety and Environment Engineering, Shandong University of Science and Technology, Qingdao 266510, China; Institute of Yellow River Delta Earth Surface Processes and Ecological Integrity, Shandong University of Science and Technology, Shandong University of Science and Technology, Qingdao 266510, China
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Gao H, Wu M, Liu H, Ou Y, Zhang T, Duan X. Unraveling the Positive Effect of Soil Moisture on the Bioaugmentation of Petroleum-Contaminated Soil Using Bioinformatics. MICROBIAL ECOLOGY 2023; 86:2436-2446. [PMID: 37278908 DOI: 10.1007/s00248-023-02245-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/13/2023] [Accepted: 05/18/2023] [Indexed: 06/07/2023]
Abstract
Petroleum contamination is a severe threat to the soil environment. Previous studies have demonstrated that petroleum degradation efficiency is promoted by enhancing soil moisture content (MC). However, the effects of MC on soil microbial ecological functions during bioremediation remain unclear. Here, we investigated the impacts of 5% and 15% of moisture contents on petroleum degradation, soil microbial structures and functions, and the related genes using high-throughput sequencing and gene function prediction. Results indicated that petroleum biodegradation efficiency was increased by 8.06% in the soils with 15% MC when compared to that with 5% of MC. The complexity and stability of soil microbial community structures with 15% MC were higher than those in the soils with 5% MC when hydrocarbon-degrading bacterial flora (HDBF) were inoculated into the soils. Fifteen percent of moisture content strengthened the interaction of the bacterial community network and reduced the loss of some key bacteria species including Mycobacterium, Sphingomonas, and Gemmatimonas. Some downregulated gene pathways relating to bioaugmentation were enhanced in the soils with 15% MC. The results suggested that the dynamic balances of microbial communities and the metabolic interactions by 15% MC treatment are the driving forces for the enhancement of bioremediation in petroleum-contaminated soil.
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Affiliation(s)
- Huan Gao
- Xi'an University of Architecture and Technology, Xi'an, 710055, People's Republic of China
- Key Laboratory of Northwest Water Resource, Environment and Ecology, MOE, Xi'an University of Architecture and Technology, Xi'an, 710055, People's Republic of China
| | - Manli Wu
- Xi'an University of Architecture and Technology, Xi'an, 710055, People's Republic of China.
- Key Laboratory of Northwest Water Resource, Environment and Ecology, MOE, Xi'an University of Architecture and Technology, Xi'an, 710055, People's Republic of China.
- Shaanxi Key Laboratory of Environmental Engineering, Xi'an University of Architecture and Technology, Xi'an, 710055, People's Republic of China.
| | - Heng Liu
- Xi'an University of Architecture and Technology, Xi'an, 710055, People's Republic of China
- Key Laboratory of Northwest Water Resource, Environment and Ecology, MOE, Xi'an University of Architecture and Technology, Xi'an, 710055, People's Republic of China
| | - Yawen Ou
- Xi'an University of Architecture and Technology, Xi'an, 710055, People's Republic of China
- Key Laboratory of Northwest Water Resource, Environment and Ecology, MOE, Xi'an University of Architecture and Technology, Xi'an, 710055, People's Republic of China
| | - Ting Zhang
- Xi'an University of Architecture and Technology, Xi'an, 710055, People's Republic of China
- Key Laboratory of Northwest Water Resource, Environment and Ecology, MOE, Xi'an University of Architecture and Technology, Xi'an, 710055, People's Republic of China
| | - Xuhong Duan
- Xi'an University of Architecture and Technology, Xi'an, 710055, People's Republic of China
- Key Laboratory of Northwest Water Resource, Environment and Ecology, MOE, Xi'an University of Architecture and Technology, Xi'an, 710055, People's Republic of China
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Kaur R, Gupta S, Tripathi V, Chauhan A, Parashar D, Shankar P, Kashyap V. Microbiome based approaches for the degradation of polycyclic aromatic hydrocarbons (PAHs): A current perception. CHEMOSPHERE 2023; 341:139951. [PMID: 37652248 DOI: 10.1016/j.chemosphere.2023.139951] [Citation(s) in RCA: 10] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/17/2023] [Revised: 08/02/2023] [Accepted: 08/22/2023] [Indexed: 09/02/2023]
Abstract
Globally, polycyclic aromatic hydrocarbons (PAHs) pollution is primarily driven by their release into the air through various combustion processes, including burning fossil fuels such as coal, oil, and gas in motor vehicles, power plants, and industries, as well as burning organic matter like wood, tobacco, and food in fireplaces, cigarettes, and grills. Apart from anthropogenic pollution sources, PAHs also occur naturally in crude oil, and their potential release during oil extraction, refining processes, and combustion further contributes to contamination and pollution concerns. PAHs are resistant and persistent in the environment because of their inherent features, viz., heterocyclic aromatic ring configurations, hydrophobicity, and thermostability. A wide range of microorganisms have been found to be effective degraders of these recalcitrant contaminants. The presence of hydrocarbons as a result of numerous anthropogenic activities is one of the primary environmental concerns. PAHs are found in soil, water, and the air, making them ubiquitous in nature. The presence of PAHs in the environment creates a problem, as their presence has a detrimental effect on humans and animals. For a variety of life forms, PAH pollutants are reported to be toxic, carcinogenic, mutation-inducing, teratogenic, and immune toxicogenics. Degradation of PAHs via biological activity is an extensively used approach in which diverse microorganisms (fungal, algal, clitellate, and protozoan) and plant species and their derived composites are utilized as biocatalysts and biosurfactants. Some microbes have the ability to transform and degrade these PAHs, allowing them to be removed from the environment. The goal of this review is to provide a critical overview of the existing understanding of PAH biodegradation. It also examines current advances in diverse methodologies for PAH degradation in order to shed light on fundamental challenges and future potential.
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Affiliation(s)
- Rasanpreet Kaur
- Department of Biotechnology, GLA University, Mathura, 281406, Uttar Pradesh, India
| | - Saurabh Gupta
- Department of Biotechnology, GLA University, Mathura, 281406, Uttar Pradesh, India.
| | - Vishal Tripathi
- Department of Biotechnology, Graphic Era (Deemed to Be University), Dehradun 248002, Uttarakhand, India
| | - Arjun Chauhan
- Department of Biotechnology, GLA University, Mathura, 281406, Uttar Pradesh, India
| | - Deepak Parashar
- Department of Medicine, Medical College of Wisconsin, Milwaukee, WI, USA
| | - Prem Shankar
- Department of Neurobiology, The University of Texas Medical Branch, 301 University Blvd, Galveston, TX-77555, USA
| | - Vivek Kashyap
- Department of Immunology and Microbiology, School of Medicine, University of Texas Rio Grande Valley, McAllen, Texas, 78504, USA; South Texas Center of Excellence in Cancer Research, School of Medicine, University of Texas Rio Grande Valley, McAllen, TX 78504, USA.
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12
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Sar P, Kundu S, Ghosh A, Saha B. Natural surfactant mediated bioremediation approaches for contaminated soil. RSC Adv 2023; 13:30586-30605. [PMID: 37859781 PMCID: PMC10583161 DOI: 10.1039/d3ra05062a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/26/2023] [Accepted: 09/07/2023] [Indexed: 10/21/2023] Open
Abstract
The treatment of environmental pollution by employing microorganisms is a promising technology, termed bioremediation, which has several advantages over the other established conventional remediation techniques. Consequently, there is an urgent inevitability to develop pragmatic techniques for bioremediation, accompanied by the potency of detoxifying soil environments completely. The bioremediation of contaminated soils has been shown to be an alternative that could be an economically viable way to restore polluted soil. The soil environments have long been extremely polluted by a number of contaminants, like agrochemicals, polyaromatic hydrocarbons, heavy metals, emerging pollutants, etc. In order to achieve a quick remediation overcoming several difficulties the utility of biosurfactants became an excellent advancement and that is why, nowadays, the biosurfactant mediated recovery of soil is a focus of interest to the researcher of the environmental science field specifically. This review provides an outline of the present scenario of soil bioremediation by employing a microbial biosurfactant. In addition to this, a brief account of the pollutants is highlighted along with how they contaminate the soil. Finally, we address the future outlook for bioremediation technologies that can be executed with a superior efficiency to restore a polluted area, even though its practical applicability has been cultivated tremendously over the few decades.
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Affiliation(s)
- Pintu Sar
- Department of Chemistry, The University of Burdwan Golapbag Burdwan 713104 WB India
- Department of Chemical Sciences, Indian Institute of Science Education and Research Kolkata Mohanpur - 741246 West Bengal India
| | - Sandip Kundu
- Department of Chemistry, The University of Burdwan Golapbag Burdwan 713104 WB India
| | - Aniruddha Ghosh
- Department of Chemistry, The University of Burdwan Golapbag Burdwan 713104 WB India
| | - Bidyut Saha
- Department of Chemistry, The University of Burdwan Golapbag Burdwan 713104 WB India
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13
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Niu H, Nie Z, Long Y, Guo J, Tan J, Bi J, Yang H. Efficient pyridine biodegradation by Stenotrophomonas maltophilia J2: Degradation performance, mechanism, and immobilized application for wastewater. JOURNAL OF HAZARDOUS MATERIALS 2023; 459:132220. [PMID: 37549577 DOI: 10.1016/j.jhazmat.2023.132220] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/24/2023] [Revised: 07/21/2023] [Accepted: 08/02/2023] [Indexed: 08/09/2023]
Abstract
Stenotrophomonas maltophilia J2, a highly efficient pyridine-degrading bacterium, was isolated from the aerobic tank of a pesticide-contaminated wastewater treatment plant. The strain J2 demonstrated an impressive pyridine degradation rate of 98.34% ± 0.49% within 72 h, at a pyridine concentration of 1100 mg·L-1, a temperature of 30 °C, a pH of 8.0, and a NaCl concentration of 0.5%. Notably, two new pyridine metabolic intermediates, 1,3-dihydroxyacetone and butyric acid, were discovered, indicating that J2 may degrade pyridine through two distinct metabolic pathways. Furthermore, the immobilized strain J2 was obtained by immobilizing J2 with biochar derived from the stem of Solidago canadensis L. In the pyridine-contaminated wastewater bioremediation experiment, the immobilized strain J2 was able to remove 2000 mg·L-1 pyridine with a 98.66% ± 0.47% degradation rate in 24 h, which was significantly higher than that of the control group (3.17% ± 1.24%), and remained above 90% in subsequent cycles until the 27th cycle. High-throughput sequencing analysis indicated that the J2 +B group had an elevated relative abundance of bacteria and functional genes that could be associated with the degradation of pyridine. The results offer a foundation for the effective use of immobilized strain in the treatment of recalcitrant pyridine-contaminated wastewater.
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Affiliation(s)
- Hongyu Niu
- College of Resources and Environment, Hunan Agricultural University, 410128 Changsha, China
| | - Zimeng Nie
- School of Environment and Energy, South China University of Technology, 510006 Guangzhou, China
| | - Yu Long
- College of Resources and Environment, Hunan Agricultural University, 410128 Changsha, China
| | - Jiayuan Guo
- College of Resources and Environment, Hunan Agricultural University, 410128 Changsha, China
| | - Ju Tan
- Changsha Ecological Monitoring Center of Hunan Province, 410001 Changsha, China
| | - Junping Bi
- Changsha Environmental Protection College, 410001 Changsha, China
| | - Haijun Yang
- College of Resources and Environment, Hunan Agricultural University, 410128 Changsha, China.
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14
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Chen R, Zhao Z, Xu T, Jia X. Microbial Consortium HJ-SH with Very High Degradation Efficiency of Phenanthrene. Microorganisms 2023; 11:2383. [PMID: 37894041 PMCID: PMC10609217 DOI: 10.3390/microorganisms11102383] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/23/2023] [Revised: 09/04/2023] [Accepted: 09/21/2023] [Indexed: 10/28/2023] Open
Abstract
Phenanthrene (PHE) is one of the model compounds of polycyclic aromatic hydrocarbons (PAHs). In this study, a natural PHE-degrading microbial consortium, named HJ-SH, with very high degradation efficiency was isolated from soil exposed to long-term PHE contamination. The results of GC analysis showed that the consortium HJ-SH degraded 98% of 100 mg/L PHE in 3 days and 93% of 1000 mg/L PHE in 5 days, an efficiency higher than that of any other natural consortia, and even most of the engineered strains and consortia reported so far. Seven dominating strains were isolated from the microbial consortium HJ-SH, named SH-1 to SH-7, which were identified according to morphological observation and 16S rDNA sequencing as Pseudomonas sp., Stenotrophomonas sp., Delftia sp., Pseudomonas sp., Brevundimonas sp., Curtobacterium sp., and Microbacterium sp., respectively. Among all the seven single strains, SH-4 showed the strongest PHE degradation ability, and had the biggest degradation contribution. However, it is very interesting that the microbial consortium can hold its high degradation ability only with the co-existence of all these seven single strains. Moreover, HJ-SH exhibited a very high tolerance for PHE, up to 4.5 g/L, and it can degrade some other typical organic pollutants such as biphenyl, anthracene, and n-hexadecane with the degradation ratios of 93%, 92% and 70%, respectively, under 100 mg/L initial concentration in 5 days. Then, we constructed an artificial consortium HJ-7 consisting of the seven single strains, SH-1 to SH-7. After comparing the degradation ratios, cell growth, and relative degradation rates, it was concluded that the artificial consortium HJ-7 with easier reproducibility, better application stability, and larger room for modification can largely replace the natural consortium HJ-SH. In conclusion, this research provided novel tools and new insights for the bioremediation of PHE and other typical organic pollutants using microbial consortia.
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Affiliation(s)
- Rui Chen
- Department of Biochemical Engineering, School of Chemical Engineering and Technology, Tianjin University, Tianjin 300072, China; (R.C.); (Z.Z.); (T.X.)
| | - Zhenhua Zhao
- Department of Biochemical Engineering, School of Chemical Engineering and Technology, Tianjin University, Tianjin 300072, China; (R.C.); (Z.Z.); (T.X.)
| | - Tao Xu
- Department of Biochemical Engineering, School of Chemical Engineering and Technology, Tianjin University, Tianjin 300072, China; (R.C.); (Z.Z.); (T.X.)
| | - Xiaoqiang Jia
- Department of Biochemical Engineering, School of Chemical Engineering and Technology, Tianjin University, Tianjin 300072, China; (R.C.); (Z.Z.); (T.X.)
- Frontier Science Center for Synthetic Biology and Key Laboratory of Systems Bioengineering (MOE), School of Chemical Engineering and Technology, Tianjin University, Tianjin 300350, China
- Collaborative Innovation Center of Chemical Science and Engineering (Tianjin), Tianjin University, Tianjin 300072, China
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Kumari A, Upadhyay V, Kumar S. A critical insight into occurrence and fate of polycyclic aromatic hydrocarbons and their green remediation approaches. CHEMOSPHERE 2023; 329:138579. [PMID: 37031842 DOI: 10.1016/j.chemosphere.2023.138579] [Citation(s) in RCA: 11] [Impact Index Per Article: 11.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/17/2023] [Revised: 03/23/2023] [Accepted: 03/31/2023] [Indexed: 05/03/2023]
Abstract
Over the last century, the tremendous growth in industrial activities particularly in the sectors of pharmaceuticals, petrochemicals and the reckless application of fertilizers and insecticides has raised the contamination of polyaromatic hydrocarbons (PAHs) tremendously. For more than a decade, the main focus of environmental experts is to come up with management approaches for the clean-up of sites polluted with PAHs. These are ubiquitous in nature i.e., widely distributed in ecosystem ranging from soil, air and marine water. Most of the PAHs possess immunotoxicity, carcinogenicity and genotoxicity. Being highly soluble in lipids, they are readily absorbed into the mammalian gastro intestinal tract. They are widely distributed with marked tendency of getting localized into body fat in varied tissues. Several remediation technologies have been tested for the removal of these environmental contaminants, particularly bioremediation has turned out to be a hope as the safest and cost-effective option. Therefore, this review first discusses various sources of PAHs, their effect on human health and interactions of PAHs with soils and sediments. In this review, a holistic insight of current scenario of existing remediation technologies and how they can be improvised along with the hindrances in the path of these technologies are properly addressed.
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Affiliation(s)
- Archana Kumari
- CSIR-National Environmental Engineering Research Institute (CSIR-NEERI), Nehru Marg, Nagpur, 440020, Maharashtra, India
| | - Vidisha Upadhyay
- CSIR-National Environmental Engineering Research Institute (CSIR-NEERI), Nehru Marg, Nagpur, 440020, Maharashtra, India
| | - Sunil Kumar
- CSIR-National Environmental Engineering Research Institute (CSIR-NEERI), Nehru Marg, Nagpur, 440020, Maharashtra, India.
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16
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Vijayanand M, Ramakrishnan A, Subramanian R, Issac PK, Nasr M, Khoo KS, Rajagopal R, Greff B, Wan Azelee NI, Jeon BH, Chang SW, Ravindran B. Polyaromatic hydrocarbons (PAHs) in the water environment: A review on toxicity, microbial biodegradation, systematic biological advancements, and environmental fate. ENVIRONMENTAL RESEARCH 2023; 227:115716. [PMID: 36940816 DOI: 10.1016/j.envres.2023.115716] [Citation(s) in RCA: 22] [Impact Index Per Article: 22.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/25/2023] [Revised: 03/04/2023] [Accepted: 03/16/2023] [Indexed: 05/08/2023]
Abstract
Polycyclic aromatic hydrocarbons (PAHs) are considered a major class of organic contaminants or pollutants, which are poisonous, mutagenic, genotoxic, and/or carcinogenic. Due to their ubiquitous occurrence and recalcitrance, PAHs-related pollution possesses significant public health and environmental concerns. Increasing the understanding of PAHs' negative impacts on ecosystems and human health has encouraged more researchers to focus on eliminating these pollutants from the environment. Nutrients available in the aqueous phase, the amount and type of microbes in the culture, and the PAHs' nature and molecular characteristics are the common factors influencing the microbial breakdown of PAHs. In recent decades, microbial community analyses, biochemical pathways, enzyme systems, gene organization, and genetic regulation related to PAH degradation have been intensively researched. Although xenobiotic-degrading microbes have a lot of potential for restoring the damaged ecosystems in a cost-effective and efficient manner, their role and strength to eliminate the refractory PAH compounds using innovative technologies are still to be explored. Recent analytical biochemistry and genetically engineered technologies have aided in improving the effectiveness of PAHs' breakdown by microorganisms, creating and developing advanced bioremediation techniques. Optimizing the key characteristics like the adsorption, bioavailability, and mass transfer of PAH boosts the microorganisms' bioremediation performance, especially in the natural aquatic water bodies. This review's primary goal is to provide an understanding of recent information about how PAHs are degraded and/or transformed in the aquatic environment by halophilic archaea, bacteria, algae, and fungi. Furthermore, the removal mechanisms of PAH in the marine/aquatic environment are discussed in terms of the recent systemic advancements in microbial degradation methodologies. The review outputs would assist in facilitating the development of new insights into PAH bioremediation.
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Affiliation(s)
- Madhumitha Vijayanand
- Department of Medical Biotechnology and Integrative Physiology, Institute of Biotechnology, Saveetha School of Engineering, Saveetha Institute of Medical and Technical Sciences, Thandalam, Chennai, 602 105, Tamil Nadu, India
| | - Abiraami Ramakrishnan
- Department of Civil Engineering, Christian College of Engineering and Technology Oddanchatram, 624619,Dindigul District, Tamilnadu, India
| | - Ramakrishnan Subramanian
- Department of Civil Engineering, Sri Krishna College of Engineering and Technology, Kuniamuthur, Coimbatore, 641008, Tamilnadu, India
| | - Praveen Kumar Issac
- Department of Medical Biotechnology and Integrative Physiology, Institute of Biotechnology, Saveetha School of Engineering, Saveetha Institute of Medical and Technical Sciences, Thandalam, Chennai, 602 105, Tamil Nadu, India.
| | - Mahmoud Nasr
- Environmental Engineering Department, Egypt-Japan University of Science and Technology (E-JUST), Alexandria, 21934, Egypt; Sanitary Engineering Department, Faculty of Engineering, Alexandria University, 21544, Alexandria, Egypt
| | - Kuan Shiong Khoo
- Biorefinery and Bioprocess Engineering Laboratory, Department of Chemical Engineering and Material Science, Yuan Ze University, Taoyuan, Taiwan
| | - Rajinikanth Rajagopal
- Sherbrooke Research and Development Center, Agriculture and Agri-Food Canada, 2000 College Street, Sherbrooke, QC J1M 0C8, Canada
| | - Babett Greff
- Department of Food Science, Albert Casimir Faculty at Mosonmagyaróvár, Széchenyi István University, 15-17 Lucsony Street, 9200, Mosonmagyaróvár, Hungary
| | - Nur Izyan Wan Azelee
- Institute of Bioproduct Development, Universiti Teknologi Malaysia, 81310, UTM Skudai, Johor Bahru, Johor Darul Takzim, Malaysia
| | - Byong-Hun Jeon
- Department of Earth Resources and Environmental Engineering, Hanyang University, Seoul 04763, South Korea
| | - Soon Woong Chang
- Department of Environmental Energy & Engineering, Kyonggi University, Suwon-si, Gyeonggi-do, 16227, South Korea
| | - Balasubramani Ravindran
- Department of Medical Biotechnology and Integrative Physiology, Institute of Biotechnology, Saveetha School of Engineering, Saveetha Institute of Medical and Technical Sciences, Thandalam, Chennai, 602 105, Tamil Nadu, India; Department of Environmental Energy & Engineering, Kyonggi University, Suwon-si, Gyeonggi-do, 16227, South Korea.
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17
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Xia M, Chen B, Fan G, Weng S, Qiu R, Hong Z, Yan Z. The shifting research landscape for PAH bioremediation in water environment: a bibliometric analysis on three decades of development. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2023:10.1007/s11356-023-27404-4. [PMID: 37150789 DOI: 10.1007/s11356-023-27404-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/06/2022] [Accepted: 04/29/2023] [Indexed: 05/09/2023]
Abstract
Polycyclic aromatic hydrocarbons (PAHs) with their carcinogenic, teratogenic, and mutagenic effects can cause great damage to the ecosystem and public health when present in water. With bioremediation, PAH contamination in water environment can be greatly reduced in an eco-friendly manner. It has thus become the research focus for many environmental scientists. In this study, a bibliometric analysis on three-decade (1990-2022) development of PAH bioremediation in water environment was conducted from temporal and spatial dimensions using CiteSpace. A total of 2480 publications, obtained from Web of Science core collection database, were used to explore the basic characteristics, hotspots, and prospects of the research area. The results showed that (1) bioremediation/biodegradation of PAHs in water environment has been getting researchers' attention since 1990, and is gaining even more traction as time goes on. (2) In terms of countries, China and the USA were the major contributors in this research area, while at the institutional level, the Chinese Academy of Sciences has produced the most research results. However, international cooperation across regions was lacking in the field. (3) Environment Science and Technology, Chemosphere, Applied and Environment Microbiology, Journal of Hazardous Materials, and Environment Pollution were the 5 most cited journals in this field. (4) There were three major stages the field has gone through, each with distinct research hotspots, including initial stage (1990-1994), mechanism investigation (1995-2000), and application exploration (2001-2010; 2011-2022). Finally, research perspectives were proposed, covering three directions, namely, bioavailability, immobilization, and viable but nonculturable (VBNC) bacteria.
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Affiliation(s)
- Mingqian Xia
- College of Civil Engineering, Fuzhou University, Fuzhou, 350116, China
| | - Bo Chen
- College of Civil Engineering, Fuzhou University, Fuzhou, 350116, China
| | - Gongduan Fan
- College of Civil Engineering, Fuzhou University, Fuzhou, 350116, China.
| | - Sunxian Weng
- Electric Power Research Institute of State Grid Fujian Electric Power Co., Ltd., Fuzhou, 350007, China
| | - Rongpeng Qiu
- College of Civil Engineering, Fuzhou University, Fuzhou, 350116, China
| | - Zhanglin Hong
- China Construction Third Bureau First Engineering Co., Ltd., Hubei, 430040, China
| | - Zhongsen Yan
- College of Civil Engineering, Fuzhou University, Fuzhou, 350116, China
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Yin Q, Nie H, Nie M, Guo Y, Zhang B, Wang L, Wang Y, Bai X. Rapid effective treatment of waxy oily sludge using a method of dispersion combined with biodegradation in a semi-fluid state. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2023; 319:120971. [PMID: 36603759 DOI: 10.1016/j.envpol.2022.120971] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/15/2022] [Revised: 12/14/2022] [Accepted: 12/27/2022] [Indexed: 06/17/2023]
Abstract
Waxy oily sludge (WOS) from petrochemical enterprises has complex components and difficult treatment. Long-term large-scale stacking has seriously threatened human health and the ecological environment. In this paper, a new rapid and effective treatment method combining dispersion and biodegradation in a semi-fluid state was developed for the WOS. The degradation mechanism of the WOS in the bioreactor was preliminarily discussed. The component analysis results showed that the compounds with large molecular weight (M ≥ 282) in the WOS accounted for more than 50%. Among all microbial consortiums, the treatment effect of the consortium FF: NY3 = 9: 1 was the best for treating the crude oil in WOS, which was significantly different from that of a single strain (p < 0.05). Under the optimal nitrogen source NH4NO3 and the concentration of rhamnolipid, the developed high-efficiency microbial consortium (FF: NY3 = 9:1) could remove 85% of the total hydrocarbon pollutants in the 20 L semi-fluid bioreactor within 9 days. The degradation characteristics of WOS components in the bioreactor showed that the developed consortium has good degradation ability for n-alkanes (about 90%), middle- (77.35%)/long-chain (72.66%) isomeric alkanes, alkenes (79.12%), alicyclic hydrocarbons (78.9%) and aromatic hydrocarbons (62.78%). The kinetic analysis results indicated that, in comparison, the middle-chain n-alkanes, middle-chain isomeric saturated alkanes, alkenes, and alicyclic hydrocarbons were most easily removed. The removal rates of long-chain n-alkanes, long-chain isomeric saturated alkanes, and aromatic hydrocarbons were relatively low. The biological toxicity test showed that the germination rate of wheat seeds in treated waxy sludge was Significantly higher than that in untreated waxy sludge (p < 0.01). These results suggest that the new method developed in this paper can treat refractory WOS quickly and effectively. This method lays the foundation for the pilot-scale treatment of the semi-fluid bioreactor.
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Affiliation(s)
- Qiuyue Yin
- School of Environmental and Municipal Engineering, Xi'an University of Architecture and Technology, Xi'an, 710055, China; Key Lab of Northwest Water Resource, Environment and Ecology, MOE, Xi'an University of Architecture and Technology, Xi'an, 710055, China
| | - Hongyun Nie
- School of Environmental and Municipal Engineering, Xi'an University of Architecture and Technology, Xi'an, 710055, China; Research Institute of Membrane Separation of Shaanxi Province, Xi'an, 710055, China
| | - Maiqian Nie
- School of Environmental and Municipal Engineering, Xi'an University of Architecture and Technology, Xi'an, 710055, China; Research Institute of Membrane Separation of Shaanxi Province, Xi'an, 710055, China.
| | - Yonghua Guo
- School of Environmental and Municipal Engineering, Xi'an University of Architecture and Technology, Xi'an, 710055, China
| | - Bo Zhang
- School of Environmental and Municipal Engineering, Xi'an University of Architecture and Technology, Xi'an, 710055, China; Key Lab of Northwest Water Resource, Environment and Ecology, MOE, Xi'an University of Architecture and Technology, Xi'an, 710055, China
| | - Lei Wang
- School of Environmental and Municipal Engineering, Xi'an University of Architecture and Technology, Xi'an, 710055, China; Research Institute of Membrane Separation of Shaanxi Province, Xi'an, 710055, China
| | - Yan Wang
- Microbiology Institute of Shaanxi Province, Xi'an, 710043, China
| | - Xuerui Bai
- School of Environmental and Municipal Engineering, Xi'an University of Architecture and Technology, Xi'an, 710055, China; Key Lab of Northwest Water Resource, Environment and Ecology, MOE, Xi'an University of Architecture and Technology, Xi'an, 710055, China
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19
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Su Y, Sun S, Liu Q, Zhao C, Li L, Chen S, Chen H, Wang Y, Tang F. Characterization of the simultaneous degradation of pyrene and removal of Cr(VI) by a bacteria consortium YH. THE SCIENCE OF THE TOTAL ENVIRONMENT 2022; 853:158388. [PMID: 36049693 DOI: 10.1016/j.scitotenv.2022.158388] [Citation(s) in RCA: 10] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/03/2022] [Revised: 08/12/2022] [Accepted: 08/25/2022] [Indexed: 06/15/2023]
Abstract
Microorganisms that can simultaneously remediate organic pollutants and heavy metal contamination are great significance in bioremediation. Nevertheless, reports of such microorganisms are still scarce. Here, Pseudomonas sp. YH-1 and Rhodococcus sp. YH-3 were isolated and identified, and they showed greater tolerance to hexavalent (VI) (750 and 800 mg·L-1). The constructed bacteria consortium YH (YH-1:YH-3 = 1:1) could simultaneously degrade 41.69% of pyrene (50 mg·L-1) and remove 76.67% of Cr(VI) (30 mg·L-1) within 5 days. The potential mechanism of Cr(VI) tolerance of YH was further explored by genomic and microscopic analysis. The results showed that YH responded to Cr(VI) stress mainly through efflux of Cr(VI) by chrA and copZ, chromate reduction, DNA-repaired proteases reduces ROS damage, and biosorption by carboxyl, hydroxyl, amino functional groups. Strains YH-1 and YH-3 also contained a variety of genes associated with resistance to other heavy metals, such as cadmium (czcBD), mercury (merAPTR), manganese (mntABC) and copper (copAC, cusABRF and pcoBD). Based on GC-MS and genomic analysis, pyrene was degraded via salicylic acid and phthalic acid pathways. Moreover, a great number of genes related to aromatic hydrocarbon catabolism were identified in the genomes of YH-1 and YH-3. These results confirmed the potential application of the bacteria consortium YH in the bioremediation of water and soil co-contaminated with PAHs-heavy metals.
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Affiliation(s)
- Yuhua Su
- College of Chemistry and Chemical Engineering, China University of Petroleum (East China), Qingdao 266580, PR China
| | - Shuo Sun
- College of Chemistry and Chemical Engineering, China University of Petroleum (East China), Qingdao 266580, PR China
| | - Qiyou Liu
- College of Chemistry and Chemical Engineering, China University of Petroleum (East China), Qingdao 266580, PR China; State Key Laboratory of Petroleum Pollution Control, Qingdao 266580, PR China.
| | - Chaocheng Zhao
- College of Chemistry and Chemical Engineering, China University of Petroleum (East China), Qingdao 266580, PR China; State Key Laboratory of Petroleum Pollution Control, Qingdao 266580, PR China
| | - Lin Li
- College of Safety and Environmental Engineering, Shandong University of Science and Technology, Qingdao 266590, PR China
| | - Shuiquan Chen
- College of Energy and Mining Engineering, Shandong University of Science and Technology, Qingdao 266590, PR China
| | - Hongxu Chen
- College of Chemistry and Chemical Engineering, China University of Petroleum (East China), Qingdao 266580, PR China
| | - Yaru Wang
- College of Chemistry and Chemical Engineering, China University of Petroleum (East China), Qingdao 266580, PR China
| | - Fang Tang
- College of Chemistry and Chemical Engineering, China University of Petroleum (East China), Qingdao 266580, PR China
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Harirchi S, Sar T, Ramezani M, Aliyu H, Etemadifar Z, Nojoumi SA, Yazdian F, Awasthi MK, Taherzadeh MJ. Bacillales: From Taxonomy to Biotechnological and Industrial Perspectives. Microorganisms 2022; 10:2355. [PMID: 36557608 PMCID: PMC9781867 DOI: 10.3390/microorganisms10122355] [Citation(s) in RCA: 11] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/26/2022] [Revised: 11/18/2022] [Accepted: 11/21/2022] [Indexed: 12/02/2022] Open
Abstract
For a long time, the genus Bacillus has been known and considered among the most applicable genera in several fields. Recent taxonomical developments resulted in the identification of more species in Bacillus-related genera, particularly in the order Bacillales (earlier heterotypic synonym: Caryophanales), with potential application for biotechnological and industrial purposes such as biofuels, bioactive agents, biopolymers, and enzymes. Therefore, a thorough understanding of the taxonomy, growth requirements and physiology, genomics, and metabolic pathways in the highly diverse bacterial order, Bacillales, will facilitate a more robust designing and sustainable production of strain lines relevant to a circular economy. This paper is focused principally on less-known genera and their potential in the order Bacillales for promising applications in the industry and addresses the taxonomical complexities of this order. Moreover, it emphasizes the biotechnological usage of some engineered strains of the order Bacillales. The elucidation of novel taxa, their metabolic pathways, and growth conditions would make it possible to drive industrial processes toward an upgraded functionality based on the microbial nature.
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Affiliation(s)
- Sharareh Harirchi
- Swedish Centre for Resource Recovery, University of Borås, 50190 Borås, Sweden
| | - Taner Sar
- Swedish Centre for Resource Recovery, University of Borås, 50190 Borås, Sweden
| | - Mohaddaseh Ramezani
- Microorganisms Bank, Iranian Biological Resource Centre (IBRC), Academic Center for Education, Culture and Research (ACECR), Tehran, Iran
| | - Habibu Aliyu
- Institute of Process Engineering in Life Science II: Technical Biology, Karlsruhe Institute of Technology, 76131 Karlsruhe, Germany
| | - Zahra Etemadifar
- Department of Cell and Molecular Biology & Microbiology, Faculty of Biological Science and Technology, University of Isfahan, Isfahan 8174673441, Iran
| | - Seyed Ali Nojoumi
- Microbiology Research Center, Pasteur Institute of Iran, Tehran 1316943551, Iran
- Department of Mycobacteriology and Pulmonary Research, Pasteur Institute of Iran, Tehran 1316943551, Iran
| | - Fatemeh Yazdian
- Department of Life Science Engineering, Faculty of New Sciences and Technologies, University of Tehran, Tehran 1439957131, Iran
| | - Mukesh Kumar Awasthi
- College of Natural Resources and Environment, Northwest A&F University, Taicheng Road 3#, Yangling, Xianyang 712100, China
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Wang D, Qin L, Liu E, Chai G, Su Z, Shan J, Yang Z, Wang Z, Wang H, Meng H, Zheng X, Li H, Li J, Lin Y. Biodegradation performance and diversity of enriched bacterial consortia capable of degrading high-molecular-weight polycyclic aromatic hydrocarbons. ENVIRONMENTAL TECHNOLOGY 2022; 43:4200-4211. [PMID: 34148513 DOI: 10.1080/09593330.2021.1946163] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/04/2021] [Accepted: 06/13/2021] [Indexed: 06/12/2023]
Abstract
Polycyclic aromatic hydrocarbons (PAHs) are key organic pollutants in the environment that pose threats to the ecosystem and human health. The degradation of high molecular weight (HMW) PAHs by enriched bacterial consortia has been previously studied, while the involved metabolisms and microbial communities are still unclear and warrant further investigations. In this study, five bacterial consortia capable of utilizing different PAHs (naphthalene, anthracene, and pyrene) as the sole carbon and energy sources were enriched from PAH-contaminated soil samples. Among the five consortia, consortium TC exhibited the highest pyrene degradation efficiency (91%) after 19 d of incubation. The degradation efficiency was further enhanced up to 99% by supplementing yeast extract. Besides, consortium TC showed tolerances to high concentrations of pyrene (up to 1000 mg/L) and different heavy metal stresses (including Zn2+, Cd2+, and Pb2+). The dominant genus in consortium TC, GS, and PL showing relatively higher degradation efficiency for anthracene and pyrene was Pseudomonas, whereas consortium PG and GD were predominated by genus Achromobacter and class Enterobacteriaceae, respectively. Consortium TC, as a highly efficient HMW PAH-degrading consortium, could be applied for synergistic biodegradation of HMW PAHs and in situ bioremediation of the sites contaminated with both PAHs and heavy metals.
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Affiliation(s)
- Dongqi Wang
- State Key Laboratory of Eco-hydraulics in Northwest Arid Region, Xi'an University of Technology, Xi'an, People's Republic of China
- Shaanxi Key Laboratory of Water Resources and Environment, Xi'an University of Technology, Xi'an, People's Republic of China
- Department of Municipal and Environmental Engineering, Xi'an University of Technology, Xi'an, People's Republic of China
| | - Lu Qin
- Department of Municipal and Environmental Engineering, Xi'an University of Technology, Xi'an, People's Republic of China
| | - Enyu Liu
- Department of Municipal and Environmental Engineering, Xi'an University of Technology, Xi'an, People's Republic of China
| | - Guodong Chai
- Department of Municipal and Environmental Engineering, Xi'an University of Technology, Xi'an, People's Republic of China
| | - Zhenduo Su
- Department of Municipal and Environmental Engineering, Xi'an University of Technology, Xi'an, People's Republic of China
| | - Jiaqi Shan
- Department of Municipal and Environmental Engineering, Xi'an University of Technology, Xi'an, People's Republic of China
| | - Zhangjie Yang
- Department of Municipal and Environmental Engineering, Xi'an University of Technology, Xi'an, People's Republic of China
| | - Zhe Wang
- Department of Municipal and Environmental Engineering, Xi'an University of Technology, Xi'an, People's Republic of China
| | - Hui Wang
- Department of Municipal and Environmental Engineering, Xi'an University of Technology, Xi'an, People's Republic of China
| | - Haiyu Meng
- Department of Municipal and Environmental Engineering, Xi'an University of Technology, Xi'an, People's Republic of China
| | - Xing Zheng
- State Key Laboratory of Eco-hydraulics in Northwest Arid Region, Xi'an University of Technology, Xi'an, People's Republic of China
- Department of Municipal and Environmental Engineering, Xi'an University of Technology, Xi'an, People's Republic of China
| | - Huaien Li
- State Key Laboratory of Eco-hydraulics in Northwest Arid Region, Xi'an University of Technology, Xi'an, People's Republic of China
- Department of Municipal and Environmental Engineering, Xi'an University of Technology, Xi'an, People's Republic of China
| | - Jiake Li
- State Key Laboratory of Eco-hydraulics in Northwest Arid Region, Xi'an University of Technology, Xi'an, People's Republic of China
- Department of Municipal and Environmental Engineering, Xi'an University of Technology, Xi'an, People's Republic of China
| | - Yishan Lin
- State Key Laboratory of Pollution Control & Resource Reuse, School of the Environment, Nanjing University, Nanjing, People's Republic of China
- State Key Laboratory of Loess and Quaternary Geology, Institute of Earth Environment, Chinese Academy of Science, Xi'an, People's Republic of China
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22
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Gosai HB, Panseriya HZ, Patel PG, Patel AC, Shankar A, Varjani S, Dave BP. Exploring bacterial communities through metagenomics during bioremediation of polycyclic aromatic hydrocarbons from contaminated sediments. THE SCIENCE OF THE TOTAL ENVIRONMENT 2022; 842:156794. [PMID: 35738384 DOI: 10.1016/j.scitotenv.2022.156794] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/05/2022] [Revised: 06/14/2022] [Accepted: 06/14/2022] [Indexed: 06/15/2023]
Abstract
The goal of this study was to evaluate the degradation effectiveness of PAHs degrading bacteria at the mesocosm level, including Stenotrophomonas maltophilia (SC), mixed culture (MC), and enriched native microflora (EC) at the mesocosm level. Maximum degradation was found in the mesocosm MC (26.67 %), followed by SC (25.08 %) and EC (18.25 %) after 60 days. Thus, mixed culture and Stenotrophomonas maltophilia could be a game changer in the PAHs bioremediation at the chronically contaminated sites. MiSeq sequencing has revealed dominancy of γ-Proteobacteria, α-Proteobacteria, β-Proteobacteria at class level and Sphingomonadales, oceanospirillales, Rhodothermales at Order level. Families Alcanivoracaceae, Alteromonadaceae, Nocardiaceae, Rhodospirillaceae and genus Stenotrophomonas, Alcanivorax, Methylophaga, Fluviicola and Rhodoplanes were considerably increased which play key role in the PAHs degradation. Dominant bacterial communities have revealed resilience community to enable potential PAHs degradation process in all the mesocosms. To the best our knowledge this is the first ever attempt in PAHs biodegradation study conducted at the mesocosm level mimicking natural environmental conditions. Consequently, this study could be a benchmark against which future progress studies for the policy makers and stakeholders to design appropriate bioremediation study for the historically PAHs polluted contaminate sites.
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Affiliation(s)
- Haren B Gosai
- Department of Biosciences, School of Sciences, Indrashil University, Rajpur-Kadi, Mehasana, Gujarat, India; Department of Life Sciences, Maharaja Krishnakumarsinhji Bhavnagar University, Bhavnagar, Gujarat, India
| | - Haresh Z Panseriya
- Department of Life Sciences, Maharaja Krishnakumarsinhji Bhavnagar University, Bhavnagar, Gujarat, India; Gujarat Ecology Society, Synergy House, Subhanpura, Vadodara, Gujarat, India
| | - Payal G Patel
- Department of Biosciences, School of Sciences, Indrashil University, Rajpur-Kadi, Mehasana, Gujarat, India
| | - Ajay C Patel
- Department of Biosciences, School of Sciences, Indrashil University, Rajpur-Kadi, Mehasana, Gujarat, India
| | - Alka Shankar
- Department of Plant Molecular Biology, University of Delhi, South Campus, Dhaula Kuan, New Delhi, India
| | - Sunita Varjani
- Gujarat Pollution Control Board, Gandhinagar, Gujarat 382 010, India.
| | - Bharti P Dave
- Department of Biosciences, School of Sciences, Indrashil University, Rajpur-Kadi, Mehasana, Gujarat, India; Department of Life Sciences, Maharaja Krishnakumarsinhji Bhavnagar University, Bhavnagar, Gujarat, India.
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Wang Q, Guo S, Ali M, Song X, Tang Z, Zhang Z, Zhang M, Luo Y. Thermally enhanced bioremediation: A review of the fundamentals and applications in soil and groundwater remediation. JOURNAL OF HAZARDOUS MATERIALS 2022; 433:128749. [PMID: 35364527 DOI: 10.1016/j.jhazmat.2022.128749] [Citation(s) in RCA: 24] [Impact Index Per Article: 12.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/27/2022] [Revised: 03/11/2022] [Accepted: 03/18/2022] [Indexed: 06/14/2023]
Abstract
Thermally enhanced bioremediation (TEB), a new concept proposed in recent years, explores the combination of thermal treatment and bioremediation to address the challenges of the low efficiency and long duration of bioremediation. This study presented a comprehensive review regarding the fundamentals of TEB and its applications in soil and groundwater remediation. The temperature effects on the bioremediation of contaminants were systematically reviewed. The thermal effects on the physical, chemical and biological characteristics of soil, and the corresponding changes of contaminants bioavailability and microbial metabolic activities were summarized. Specifically, the increase in temperature within a suitable range can proliferate enzymes enrichment, extracellular polysaccharides and biosurfactants production, and further enhancing bioremediation. Furthermore, a systematic evaluation of TEB applications by utilizing traditional in situ heating technologies, as well as renewable energy (e.g., stored aquifer thermal energy and solar energy), was provided. Additionally, TEB has been applied as a biological polishing technology post thermal treatment, which can be a cost-effective method to address the contaminants rebounds in groundwater remediation. However, there are still various challenges to be addressed in TEB, and future research perspectives to further improve the basic understanding and applications of TEB for the remediation of contaminated soil and groundwater are presented.
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Affiliation(s)
- Qing Wang
- Key Laboratory of Soil Environment and Pollution Remediation, Institute of Soil Science, Chinese Academy of Sciences, Nanjing 210008, China
| | - Siwei Guo
- Zhejiang University, Hangzhou, China
| | - Mukhtiar Ali
- Key Laboratory of Soil Environment and Pollution Remediation, Institute of Soil Science, Chinese Academy of Sciences, Nanjing 210008, China; University of Chinese Academy of Sciences, Beijing 100049, China
| | - Xin Song
- Key Laboratory of Soil Environment and Pollution Remediation, Institute of Soil Science, Chinese Academy of Sciences, Nanjing 210008, China; University of Chinese Academy of Sciences, Beijing 100049, China.
| | - Zhiwen Tang
- Key Laboratory of Soil Environment and Pollution Remediation, Institute of Soil Science, Chinese Academy of Sciences, Nanjing 210008, China; University of Chinese Academy of Sciences, Beijing 100049, China
| | - Zhuanxia Zhang
- Key Laboratory of Soil Environment and Pollution Remediation, Institute of Soil Science, Chinese Academy of Sciences, Nanjing 210008, China; University of Chinese Academy of Sciences, Beijing 100049, China
| | - Meng Zhang
- Key Laboratory of Soil Environment and Pollution Remediation, Institute of Soil Science, Chinese Academy of Sciences, Nanjing 210008, China
| | - Yongming Luo
- Key Laboratory of Soil Environment and Pollution Remediation, Institute of Soil Science, Chinese Academy of Sciences, Nanjing 210008, China; University of Chinese Academy of Sciences, Beijing 100049, China
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Daâssi D, Qabil Almaghribi F. Petroleum-contaminated soil: environmental occurrence and remediation strategies. 3 Biotech 2022; 12:139. [PMID: 35646506 DOI: 10.1007/s13205-022-03198-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/09/2021] [Accepted: 05/04/2022] [Indexed: 11/24/2022] Open
Abstract
Soil is an environmental matrix that carries life for all living things. With the rise of human activities and the acceleration of population, the soil has been exposed in part to pollution by the discharge of various xenobiotics and persistent pollutants into it. The disposal of toxic substances such as polycyclic aromatic hydrocarbons (PAHs) alters soil properties, affects microbial biodiversity, and damages objects. Considering the mutagenicity, carcinogenicity, and toxicity of petroleum hydrocarbons, the restoration and clean-up of PAH-polluted sites represents an important technological and environmental challenge for sustainable growth and development. Though several treatment methods to remediate PAH-polluted soils exist, interesting bacteria, fungi, and their enzymes receive considerable attention. The aim of the present review is to discuss PAHs' impact on soil properties. Also, this review illustrates physicochemical and biological remediation strategies for treating PAH-contaminated soil. The degradation pathways and contributing factors of microbial PAH-degradation are elucidated. This review also assesses the use of conventional microbial remediation compared to the application of genetically engineered microorganisms (GEM) that can provide a cost-effective and eco-friendly PAH-bioremediation strategy.
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Affiliation(s)
- Dalel Daâssi
- Department of Biology, College of Sciences and Arts, Khulais, University of Jeddah, Jeddah, Saudi Arabia
| | - Fatimah Qabil Almaghribi
- Department of Biology, College of Sciences and Arts, Khulais, University of Jeddah, Jeddah, Saudi Arabia
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25
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Mustafa YA, Mohammed SJ, Ridha MJM. Polyaromatic hydrocarbons biodegradation using mix culture of microorganisms from sewage waste sludge: application of artificial neural network modelling. JOURNAL OF ENVIRONMENTAL HEALTH SCIENCE & ENGINEERING 2022; 20:405-418. [PMID: 35669802 PMCID: PMC9163246 DOI: 10.1007/s40201-022-00787-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/06/2021] [Accepted: 01/01/2022] [Indexed: 06/15/2023]
Abstract
PURPOSE In this study, we aimed to examine the tolerance of mixed culture of microorganisms isolated from sewage waste sludge to degrade high concentrations of polyaromatic hydrocarbons, naphthalene, and phenanthrene. The performance of the artificial neural network (ANN) model to predict and simulate the experimental biodegradation results was investigated. METHODS The mixed culture of microorganisms was isolated from sewage waste sludge and adopted to biodegrade naphthalene and phenanthrene at different concentrations (100-1000mg/L). Sewage waste sludge obtained from wastewater treatment plants. A three-layer feed-forward network with a sigmoid transfer function (logsig) at the hidden layer, a linear transfer function (purelin) at the output layer, and a backpropagation training algorithm was used to set the ANN model. RESULTS The results of this study show that naphthalene at concentrations of 100, 300, 700, and 1000 mg/L was depleted after incubation with the mixed culture for 6, 8, 14, and 16 days, respectively. For phenanthrene, depletion of 100, 300, 600, and 1000 mg/L was achieved after 8, 11, 16, and 19 days of incubation, respectively. A high correlation coefficient of 99.5% between the predicted and the experimental results were obtained by using the AAN model. CONCLUSION The results indicated that the mixed culture of microorganisms from sewage waste sludge could effectively consume naphthalene and phenanthrene as carbon and energy sources. Also, the ANN model could efficiently predict the experimental results for biodegradation treatment.
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Affiliation(s)
- Yasmen A. Mustafa
- Department of Economics of Oil and Gas, University of Imam Jaafar Al-Sadiq, Baghdad, Iraq
| | - Sinan J. Mohammed
- Department of Economics of Oil and Gas, University of Imam Jaafar Al-Sadiq, Baghdad, Iraq
| | - Mohanad J. M. Ridha
- Department of Environmental Engineering, University of Baghdad, Baghdad, Iraq
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Kalia A, Sharma S, Semor N, Babele PK, Sagar S, Bhatia RK, Walia A. Recent advancements in hydrocarbon bioremediation and future challenges: a review. 3 Biotech 2022; 12:135. [PMID: 35620568 PMCID: PMC9127022 DOI: 10.1007/s13205-022-03199-y] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/19/2022] [Accepted: 05/04/2022] [Indexed: 11/01/2022] Open
Abstract
Petrochemicals are important hydrocarbons, which are one of the major concerns when accidently escaped into the environment. On one hand, these cause soil and fresh water pollution on land due to their seepage and leakage from automobile and petrochemical industries. On the other hand, oil spills occur during the transport of crude oil or refined petroleum products in the oceans around the world. These hydrocarbon and petrochemical spills have not only posed a hazard to the environment and marine life, but also linked to numerous ailments like cancers and neural disorders. Therefore, it is very important to remove or degrade these pollutants before their hazardous effects deteriorate the environment. There are varieties of mechanical and chemical methods for removing hydrocarbons from polluted areas, but they are all ineffective and expensive. Bioremediation techniques provide an economical and eco-friendly mechanism for removing petrochemical and hydrocarbon residues from the affected sites. Bioremediation refers to the complete mineralization or transformation of complex organic pollutants into the simplest compounds by biological agents such as bacteria, fungi, etc. Many indigenous microbes present in nature are capable of detoxification of various hydrocarbons and their contaminants. This review presents an updated overview of recent advancements in various technologies used in the degradation and bioremediation of petroleum hydrocarbons, providing useful insights to manage such problems in an eco-friendly manner.
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Affiliation(s)
- Arun Kalia
- Center for Environmental Science and Technology, Central University of Punjab, Bhatinda, 151001 India
| | - Samriti Sharma
- Department of Biotechnology, Dr Yashwant Singh Parmar University of Horticulture and Forestry, Nauni, Solan, India
| | - Nisha Semor
- Department of Biotechnology, Himachal Pradesh University, Summer Hill, Shimla, 171005 India
| | - Piyoosh Kumar Babele
- College of Agriculture, Rani Lakshmi Bai Central Agricultural University, Jhansi, 284003 Uttar Pradesh India
| | - Shweta Sagar
- Department of Microbiology, College of Basic Sciences, CSKHPKV, Palampur, 176062 Himachal Pradesh India
| | - Ravi Kant Bhatia
- Department of Biotechnology, Himachal Pradesh University, Summer Hill, Shimla, 171005 India
| | - Abhishek Walia
- Department of Microbiology, College of Basic Sciences, CSKHPKV, Palampur, 176062 Himachal Pradesh India
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Bajpai A, Agnihotri R, Prakash A, Johri BN. Biosurfactant from Bacillus sp. A5F Reduces Disease Incidence of Sclerotinia sclerotiorum in Soybean Crop. Curr Microbiol 2022; 79:206. [PMID: 35622162 DOI: 10.1007/s00284-022-02897-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/12/2022] [Accepted: 05/03/2022] [Indexed: 11/26/2022]
Abstract
The present study was conducted to assess the biocontrol activity of biosurfactants obtained from Bacillus species A5F. The variables significantly influencing the production of biosurfactants under in vitro conditions were further optimized using response surface methodology. Optimal values of selected culture variables, i.e., glucose, soybean oil, and incubation time were 3.5 g l-1, 3.5 ml l-1, and 78 h, respectively, resulting in 2.14-fold enhancement in biosurfactant levels in 5 l fermentor. Identified biosurfactants had a significant effect on chlorophyll content, shoot biomass, number of pods, and seed weight. Biosurfactants also reduced the disease incidence in S. sclerotiorum infected soybean plants and showed antagonistic action against major phytopathogens by disrupting the hyphal cell wall. 16% reduction in ITS gene copy number was observed as compared to control with less non-target effect upon biosurfactant spray on foliar parts of soybean. Thus, the study confirms that biosurfactants from strain A5F can be used as a potent biocontrol agent to control sclerotium wilt on soybean plants.
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Affiliation(s)
- Apekcha Bajpai
- Department of Microbiology, Barkatullah University, Bhopal, M.P., 462026, India.
| | - Richa Agnihotri
- M S Swaminathan Research Foundation (MSSRF), Pillaiyarkuppam, Thondamanatham Post, Vazhuthavoor Road, Puducherry, 605502, India
| | - Anil Prakash
- Department of Microbiology, Barkatullah University, Bhopal, M.P., 462026, India.
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Optimization of conditions for a surfactant-producing strain and application to petroleum hydrocarbon-contaminated soil bioremediation. Colloids Surf B Biointerfaces 2022; 213:112428. [PMID: 35231686 DOI: 10.1016/j.colsurfb.2022.112428] [Citation(s) in RCA: 7] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/09/2021] [Revised: 02/21/2022] [Accepted: 02/22/2022] [Indexed: 01/04/2023]
Abstract
Petroleum hydrocarbon-contaminated sites have been mainly remediated through the surfactant-enhanced soil leaching method. However, the commonly used chemical surfactants have poor biocompatibility and are prone to form residues in fields. Therefore, the purpose of this research is to establish an effective system of biosurfactant remediation in the field and provide instructions for common bioremediation challenges. First, wild-type Bacillus amyloliquefaciens A3, which produced lipopeptide biosurfactant, was used to improve the production of biosurfactant by atmosphere and room temperature plasma (ARTP) mutagenesis. Second, the mutant 1-24 was selected from a total of 174 mutants due to the outstanding yield. Subsequently, 1-24 was applied in the soil column leaching experiments and removed 45.44% of petroleum hydrocarbons by changing the relevant enzyme activities. Biosurfactant addition and 1-24 inoculation effectively activated a portion of the petroleum hydrocarbons in the soil columns, and 1-24 presented potential as a desired candidate for bioremediation. This is the first report of using ARTP mutagenesis to improve the production of biosurfactants. Simultaneously, we first propose a theoretical system in which the yield of biosurfactant was increased using ARTP mutagenesis for strains and applied the mutants in situ soil bioremediation. This research indicated that the theoretical system was useful in soil columns to simulate field remediation conditions, providing practical references for the bioremediation of contaminated soil.
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29
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Sarubbo LA, Silva MDGC, Durval IJB, Bezerra KGO, Ribeiro BG, Silva IA, Twigg MS, Banat IM. Biosurfactants: Production, Properties, Applications, Trends, and General Perspectives. Biochem Eng J 2022. [DOI: 10.1016/j.bej.2022.108377] [Citation(s) in RCA: 18] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
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30
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Alao MB, Adebayo EA. Fungi as veritable tool in bioremediation of polycyclic aromatic hydrocarbons‐polluted wastewater. J Basic Microbiol 2022; 62:223-244. [DOI: 10.1002/jobm.202100376] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/20/2021] [Revised: 12/20/2021] [Accepted: 12/23/2021] [Indexed: 11/10/2022]
Affiliation(s)
- Micheal B. Alao
- Microbiology and Biotechnology Laboratory, Department of Pure and Applied Biology Ladoke Akintola University of Technology Ogbomoso Nigeria
| | - Elijah A. Adebayo
- Microbiology and Biotechnology Laboratory, Department of Pure and Applied Biology Ladoke Akintola University of Technology Ogbomoso Nigeria
- Microbiology Unit, Department of Pure and Applied Biology Ladoke Akintola University of Technology Ogbomoso Nigeria
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Varjani S, Shah AV, Vyas S, Srivastava VK. Processes and prospects on valorizing solid waste for the production of valuable products employing bio-routes: A systematic review. CHEMOSPHERE 2021; 282:130954. [PMID: 34082315 DOI: 10.1016/j.chemosphere.2021.130954] [Citation(s) in RCA: 40] [Impact Index Per Article: 13.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/23/2021] [Revised: 05/08/2021] [Accepted: 05/17/2021] [Indexed: 06/12/2023]
Abstract
Humanity is struggling against a major problem for a proper management of generated municipal solid waste. The collected waste causes natural issues like uncontrollable emission of greenhouse gases and others. Even though, escalation of waste results in minimizing the areas accessible for disposing the waste. Creating awareness in the society to use organic products like biofuels, biofertilizers and biogas is a need of an hour. Biochemical processes such as composting, vermicomposting, anaerobic digestion, and landfilling play important role in valorizing biomass and solid waste for production of biofuels, biosurfactants and biopolymer. This paper covers the details of biomass and solid waste characteristics and its composition. It is also focused to provide updated information about reutilization of biomass for value creation. Technologies and products obtained through bio-routes are discussed in current review paper together with the integrated system of solid waste management. It also covers challenges, innovations and perspectives in this field.
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Affiliation(s)
- Sunita Varjani
- Gujarat Pollution Control Board, Gandhinagar, 382 010, Gujarat, India; Sankalchand Patel Vidyadham, Sankalchand Patel University, Visnagar, 384 315, Gujarat, India.
| | - Anil V Shah
- Gujarat Pollution Control Board, Gandhinagar, 382 010, Gujarat, India; Sankalchand Patel Vidyadham, Sankalchand Patel University, Visnagar, 384 315, Gujarat, India
| | - Shaili Vyas
- Gujarat Pollution Control Board, Gandhinagar, 382 010, Gujarat, India; Kadi Sarva Vishwavidyalaya, Gandhinagar, Gujarat, 382015, India
| | - Vijay Kumar Srivastava
- Sankalchand Patel Vidyadham, Sankalchand Patel University, Visnagar, 384 315, Gujarat, India
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32
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Proteomic perspectives on thermotolerant microbes: an updated review. Mol Biol Rep 2021; 49:629-646. [PMID: 34671903 DOI: 10.1007/s11033-021-06805-z] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/11/2021] [Accepted: 10/04/2021] [Indexed: 10/20/2022]
Abstract
INTRODUCTION Thermotolerant microbes are a group of microorganisms that survive in elevated temperatures. The thermotolerant microbes, which are found in geothermal heat zones, grow at temperatures of or above 45°C. The proteins present in such microbes are optimally active at these elevated temperatures. Hence, therefore, serves as an advantage in various biotechnological applications. In the last few years, scientists have tried to understand the molecular mechanisms behind the maintenance of the structural integrity of the cell and to study the stability of various thermotolerant proteins at extreme temperatures. Proteomic analysis is the solution for this search. Applying novel proteomic tools determines the proteins involved in the thermostability of microbes at elevated temperatures. METHODS Advanced proteomic techniques like Mass spectrometry, nano-LC-MS, protein microarray, ICAT, iTRAQ, and SILAC could enable the screening and identification of novel thermostable proteins. RESULTS This review provides up-to-date details on the protein signature of various thermotolerant microbes analyzed through advanced proteomic tools concerning relevant research articles. The protein complex composition from various thermotolerant microbes cultured at different temperatures, their structural arrangement, and functional efficiency of the protein was reviewed and reported. CONCLUSION This review provides an overview of thermotolerant microbes, their enzymes, and the proteomic tools implemented to characterize them. This article also reviewed a comprehensive view of the current proteomic approaches for protein profiling in thermotolerant microbes.
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Kaur G, Krol M, Brar SK. Geothermal heating: Is it a boon or a bane for bioremediation? ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2021; 287:117609. [PMID: 34182401 DOI: 10.1016/j.envpol.2021.117609] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/01/2021] [Revised: 05/14/2021] [Accepted: 06/14/2021] [Indexed: 06/13/2023]
Abstract
There has been a worldwide interest in renewable energy technologies, as a means of decreasing reliance on fossil fuels, minimizing climate change effects, and reducing greenhouse emissions. One such technology is geothermal heating where the constant subsurface temperature is used to cool or heat building interiors via heat pumps. In Canada, the use of geothermal heating has become a popular option for heating and cooling buildings, and it is anticipated that, in the near term, most large buildings will include geothermal heating as part of their climate control strategy. However, little is known about the environmental impacts of geothermal heating on the subsurface environment. The present review will examine the effect of geothermal heating on groundwater flow and remediation efforts, whereby the heat generated by geothermal systems may help with urban pollution. "Geothermal Remediation" could leverage the subsurface heating resulting from geothermal systems to accelerate biodegradation of certain petroleum-based pollutants at brown-field sites, while providing building(s) with sustainable heating and cooling. This idea coincides with the rising momentum towards sustainable and green remediation in Europe and the United States. To ensure that Geothermal Remediation is achievable, the effect of heat on bioremediation needs to be examined. This review provides an insight into what we know about heat effects on bioremediation activities and subsurface transport.
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Affiliation(s)
- Gurpreet Kaur
- Department of Civil Engineering, Lassonde School of Engineering, York University, Toronto, Ontario, M3J 1P3, Canada
| | - Magdalena Krol
- Department of Civil Engineering, Lassonde School of Engineering, York University, Toronto, Ontario, M3J 1P3, Canada
| | - Satinder Kaur Brar
- Department of Civil Engineering, Lassonde School of Engineering, York University, Toronto, Ontario, M3J 1P3, Canada.
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Microalgae–Bacteria Consortia: A Review on the Degradation of Polycyclic Aromatic Hydrocarbons (PAHs). ARABIAN JOURNAL FOR SCIENCE AND ENGINEERING 2021. [DOI: 10.1007/s13369-021-06236-9] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/24/2023]
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Li M, Yin H, Zhu M, Yu Y, Lu G, Dang Z. Co-metabolic and biochar-promoted biodegradation of mixed PAHs by highly efficient microbial consortium QY1. J Environ Sci (China) 2021; 107:65-76. [PMID: 34412788 DOI: 10.1016/j.jes.2021.02.002] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/09/2020] [Revised: 01/20/2021] [Accepted: 02/01/2021] [Indexed: 05/22/2023]
Abstract
Polycyclic aromatic hydrocarbons (PAHs), typical representatives of the persistent organic pollutants (POPs), have become ubiquitous in the environment. In this study, a novel microbial consortium QY1 that performed outstanding PAHs-degrading capacity has been enriched. The degradation characteristics of single and mixed PAHs treated with QY1 were studied, and the effect of biochar on biodegradation of mixed PAHs and the potential of biochar in PAHs-heavy metal combined pollution bioremediation were also investigated. Results showed that, in single substrate system, QY1 degraded 94.5% of 500 mg/L phenanthrene (PHE) and 17.8% of 10 mg/L pyrene (PYR) after 7 days, while in PHE-PYR mixture system, the biodegradation efficiencies of PHE (500 mg/L) and PYR (10 mg/L) reached 94.0% and 96.2%, respectively, since PHE served as co-metabolic substrate to have significantly improved PYR biodegradation. Notably, with the cooperation of biochar, the biodegradations of PHE and PYR were greatly accelerated. Further, biochar could reduce the adverse impact of heavy metals (Cd2+, Cu2+, Cr2O72-) on PYR biodegradation remarkably. The sequencing analysis revealed that Methylobacterium, Burkholderia and Stenotrophomonas were the dominant genera of QY1 in almost all treatments, indicating that these genera might play key roles in PAHs biodegradation. Overall, this study provided new insights into the efficient bioremediation of PAHs-contaminated site.
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Affiliation(s)
- Min Li
- Key Laboratory of Ministry of Education on Pollution Control and Ecosystem Restoration in Industry Clusters, School of Environment and Energy, South China University of Technology, Guangdong 510006, China
| | - Hua Yin
- Key Laboratory of Ministry of Education on Pollution Control and Ecosystem Restoration in Industry Clusters, School of Environment and Energy, South China University of Technology, Guangdong 510006, China.
| | - Minghan Zhu
- Key Laboratory of Ministry of Education on Pollution Control and Ecosystem Restoration in Industry Clusters, School of Environment and Energy, South China University of Technology, Guangdong 510006, China
| | - Yuanyuan Yu
- Guangdong Provincial Key Laboratory of Petrochemical Pollution Processes and Control, School of Environmental Science and Engineering, Guangdong University of Petrochemical Technology, Guangdong 525000, China
| | - Guining Lu
- Key Laboratory of Ministry of Education on Pollution Control and Ecosystem Restoration in Industry Clusters, School of Environment and Energy, South China University of Technology, Guangdong 510006, China
| | - Zhi Dang
- Key Laboratory of Ministry of Education on Pollution Control and Ecosystem Restoration in Industry Clusters, School of Environment and Energy, South China University of Technology, Guangdong 510006, China
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Nie Z, Yan B, Xu Y, Awasthi MK, Yang H. Characterization of pyridine biodegradation by two Enterobacter sp. strains immobilized on Solidago canadensis L. stem derived biochar. JOURNAL OF HAZARDOUS MATERIALS 2021; 414:125577. [PMID: 33689996 DOI: 10.1016/j.jhazmat.2021.125577] [Citation(s) in RCA: 16] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/23/2020] [Revised: 02/18/2021] [Accepted: 03/01/2021] [Indexed: 06/12/2023]
Abstract
In this study, two pyridine-degrading strains namely Enterobacter cloacae complex sp. BD17 and Enterobacter sp.BD19 were isolated from the aerobic tank of a pesticide wastewater treatment plant. The mixed bacteria H4 composed of BD17 and BD19 at a ratio of 1:1 was immobilized by Solidago canadensis L. stem biochar with a dosage of 2 g·L-1. The highest pyridine removal rate of 91.70% was achieved by the immobilized H4 at an initial pyridine concentration of 200 mg·L-1, pH of 7.0, temperature of 28 °C and salinity of 3.0% within 36 h. The main intermediates of pyridine degradation by BD17 were pyridine-2-carboxamide, 2-aminopropanediamide, and 2-aminoacetamide, while 2-picolinic acid, isopropyl acetate, isopropyl alcohol, and acetaldehyde were identified with BD19 by adopting GC-MS technique. Interestingly, there was a possibility of totally mineralization of pyridine and the corresponding degradation pathways of BD17 and BD19 were revealed for the first time.
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Affiliation(s)
- Zimeng Nie
- College of Resources and Environment, Hunan Agricultural University, Changsha 410128, Hunan Province, China; Faculty of Environmental Science and Engineering, Kunming University of Science and Technology, Kunming 650500, Yunan Province, China
| | - Binghua Yan
- College of Plant Protection, Hunan Agricultural University, Changsha 410128, Hunan Province, China
| | - Yunhai Xu
- College of Plant Protection, Hunan Agricultural University, Changsha 410128, Hunan Province, China
| | - Mukesh Kumar Awasthi
- College of Natural Resources and Environment, Northwest A&F University, Yangling, Shaanxi Province, 712100, PR China; Swedish Centre for Resource Recovery, University of Borås, 50190, Borås, Sweden.
| | - Haijun Yang
- College of Plant Protection, Hunan Agricultural University, Changsha 410128, Hunan Province, China.
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Sharma A, Kaushik N, Sharma A, Bajaj A, Rasane M, Shouche YS, Marzouk T, Djébali N. Screening of Tomato Seed Bacterial Endophytes for Antifungal Activity Reveals Lipopeptide Producing Bacillus siamensis Strain NKIT9 as a Potential Bio-Control Agent. Front Microbiol 2021; 12:609482. [PMID: 34177819 PMCID: PMC8222588 DOI: 10.3389/fmicb.2021.609482] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/23/2020] [Accepted: 04/23/2021] [Indexed: 11/13/2022] Open
Abstract
The current study investigates the diversity pattern and fungicidal potential of bacterial endophytes isolated from two different organic varieties of tomato plants (V1 and V2). A total of seventy-five bacterial isolates identified by 16S rRNA gene sequencing revealed a majority of genus as Bacillus and one Planococcus, which were grouped into eight different species. The Shannon diversity H' (1.56), Simpson's index of diversity (0.93), Magalef' index (2.23), Evenness (0.96), and Species richness (7) indicated the high endophytic bacterial diversity in the V1 variety of the tomato. Bacterial endophytes isolated from both of the varieties were screened for their antifungal activity against five economically critical fungal pathogens (viz., Botrytis cinerea, Rhizoctonia solani, Fusarium solani, Verticillium lateritium, and Alternaria solani) of tomato crop through dual culture assay. The data revealed B. siamensis strain NKIT9 as the most potent antagonist, significantly (p < 0.05) inhibiting the mycelial growth between 75 to 90% against selected fungal pathogens. High bioactivity of lipopeptide extract of strain NKIT9 was recorded against R. solani with minimum IC50 value of 230 μg/ml. The Ultra Performance Liquid Chromatography-High Definition Mass Spectrometry (UPLC-HDMS) analysis of this lipopeptide extract revealed the presence of Surfactin and Bacillomycin D. Furthermore, in-vitro results showed that the selected bacterial strain significantly minimized the disease incidence in damping-off assay which makes this strain a promising antifungal bio-control agent. Moreover, in the pot experiment the NKIT9 increased the fruit yield by 59.2% compared with the untreated R. solani infested control.
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Affiliation(s)
- Ayushi Sharma
- Amity Food and Agriculture Foundation, Amity University Uttar Pradesh, Noida, India.,Amity Institute of Microbial Technology, Amity University Uttar Pradesh, Noida, India
| | - Nutan Kaushik
- Amity Food and Agriculture Foundation, Amity University Uttar Pradesh, Noida, India
| | - Abhishek Sharma
- Amity Food and Agriculture Foundation, Amity University Uttar Pradesh, Noida, India
| | - Abhay Bajaj
- National Centre for Microbial Resource, National Centre for Cell Science, Pune, India
| | - Mandar Rasane
- National Centre for Microbial Resource, National Centre for Cell Science, Pune, India
| | - Yogesh S Shouche
- National Centre for Microbial Resource, National Centre for Cell Science, Pune, India
| | - Takwa Marzouk
- Centre of Biotechnology of Borj Cedria, Laboratory of Bioactive Substances, Hammam-lif, Tunisia
| | - Naceur Djébali
- Centre of Biotechnology of Borj Cedria, Laboratory of Bioactive Substances, Hammam-lif, Tunisia
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Hamad AA, Moubasher HA, Moustafa YM, Mohamed NH, Abd-el rhim EH. Petroleum Hydrocarbon Bioremediation Using Native Fungal Isolates and Consortia. ScientificWorldJournal 2021; 2021:6641533. [PMID: 34054359 PMCID: PMC8112951 DOI: 10.1155/2021/6641533] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/28/2020] [Revised: 02/14/2021] [Accepted: 03/17/2021] [Indexed: 11/22/2022] Open
Abstract
Crude oil spills as a result of natural disasters or extraction and transportation operations are common nowadays. Oil spills have adverse effects on both aquatic and terrestrial ecosystems and pose a threat to human health. This study have been concerned with studying the capability of six fungal species (Curvularia brachyspora, Penicillium chrysogenum, Scopulariopsis brevicaulis, Cladosporium sphaerospermum, Alternaria alternata, and Stemphylium botryosum) and three fungal consortia (FC), FC1 (P. chrysogenum and C. brachyspora), FC2 (S. brevicaulis and S. botryosum), and FC3 (S. brevicaulis, S. botryosum, and C. sphaerospermum), to remediate petroleum hydrocarbons (PHs). Qualitative and quantitative changes in polyaromatic hydrocarbons (PAHs) and saturated hydrocarbons (SH) mixtures and the patterns of PHs degradation have been examined using HPLC and GC. Studying the GC chromatogram of C. sphaerospermum revealed severe degradation of SHs exhibited by this species, and the normal-paraffin and isoparaffin degradation percentage have been valued 97.19% and 98.88%, respectively. A. alternata has shown the highest significant (at P ˂ 0.05) PAH degradation percent reaching 72.07%; followed by P. chrysogenum, 59.51%. HPLC data have revealed that high-molecular-weight PAH percent/total PAHs decreased significantly from 98.94% in control samples to 68.78% in samples treated with A. alternata. FC1 and FC2 consortia have exhibited the highest significant PH deterioration abilities than did the individual isolates, indicating that these fungal consortia exhibited positive synergistic effects. The study supports the critical idea of the potential PAH and SH biodegradation as a more ecologically acceptable alternative to their chemical degradation.
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Affiliation(s)
- Asmaa A. Hamad
- Department of Botany and Microbiology, Faculty of Science, Cairo University, Cairo, Egypt
- Department of Biology, Faculty of Science, Taif University, Taif, Saudi Arabia
| | - Hani A. Moubasher
- Department of Botany and Microbiology, Faculty of Science, Cairo University, Cairo, Egypt
| | | | | | - Eman H. Abd-el rhim
- Department of Botany and Microbiology, Faculty of Science, Cairo University, Cairo, Egypt
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Zhang L, Yan J, Xiao Z, Tang S, Chen Y, Sun G, Wang W, Yu Y. Using Vinegar Residue-Based Carrier Materials to Improve the Biodegradation of Phenanthrene in Aqueous Solution. JOURNAL OF NANOSCIENCE AND NANOTECHNOLOGY 2021; 21:3134-3147. [PMID: 33653489 DOI: 10.1166/jnn.2021.19123] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/12/2023]
Abstract
A large amount of vinegar residue (VR) is generated every year in China, causing serious environmental pollutions. Meanwhile, as a kind of persistent organic pollutants, polycyclic aromatic hydrocarbons (PAHs) ubiquitously exist in environments. With a goal of reusing VR and reducing PAHs pollutions, we herein isolated one B. subtilis strain, ZL09-26, which can degrade phenanthrene and produce biosurfactants. Subsequently, raw VR was dried under different temperatures (50 °C, 80 °C, 100 °C and 120 °C) or pyrolyzed under 350 °C and 700 °C, respectively. After being characterized by various approaches, the treated VR were mixed with ZL09-26 as carriers to degrade phenanthrene. We found that VR dried at 50 °C (VR50) was the best in promoting the growth of ZL09-26 and the degradation of phenanthrene. This result may be attributed to the residual nutrients, suitable porosity and small surface charge of VR50. Our results demonstrate the potential of VR in the biodegradation of phenanthrene, which may be meaningful for developing new VR-based approaches to remove PAHs in aqueous environments.
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Affiliation(s)
- Lei Zhang
- College of Biotechnology and Pharmaceutical Engineering, Nanjing Tech University, Nanjing 211816, People's Republic of China
| | - Jinyuan Yan
- College of Biotechnology and Pharmaceutical Engineering, Nanjing Tech University, Nanjing 211816, People's Republic of China
| | - Zhixing Xiao
- College of Urban Construction, Nanjing Tech University, Nanjing 211816, People's Republic of China
| | - Susu Tang
- College of Biotechnology and Pharmaceutical Engineering, Nanjing Tech University, Nanjing 211816, People's Republic of China
| | - Yunliang Chen
- School of Agricultural Equipment Engineering, Jiangsu University, Zhenjiang 212013, People's Republic of China
| | - Gangzheng Sun
- Research Institute of Petroleum Engineering and Technology, Shengli Oilfield Company, Sinopec, Dongying 257067, People's Republic of China
| | - Weidong Wang
- Research Institute of Petroleum Engineering and Technology, Shengli Oilfield Company, Sinopec, Dongying 257067, People's Republic of China
| | - Yadong Yu
- College of Biotechnology and Pharmaceutical Engineering, Nanjing Tech University, Nanjing 211816, People's Republic of China
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Varjani S, Pandey A, Upasani VN. Petroleum sludge polluted soil remediation: Integrated approach involving novel bacterial consortium and nutrient application. THE SCIENCE OF THE TOTAL ENVIRONMENT 2021; 763:142934. [PMID: 33268247 DOI: 10.1016/j.scitotenv.2020.142934] [Citation(s) in RCA: 19] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/08/2020] [Revised: 09/26/2020] [Accepted: 10/06/2020] [Indexed: 06/12/2023]
Abstract
Petroleum sludge has been reported as noteworthy hazardous solid waste generated from industrial activities of petroleum sector. Environment friendly and economically sound treatment of petroleum sludge has attracted global attention worldwide and has become a thrust area of research. Petroleum sludge bioremediation is gaining interest of researchers globally to clean pollutants from soil ecosystems. To date of submission of the work there is no literature available reporting comparing five approaches for remediation of agricultural soil polluted with petroleum sludge employing hydrocarbon utilizing bacterial consortium (HUBC). Further studies on toxicity were performed through pot experiments using Vigna radiata. The aim of this research work was to compare capability of five approaches for remediating petroleum sludge polluted agricultural soil by employing soil microcosms. Best results were obtained when simultaneous application of HUBC and nutrients was performed in microcosm. Highest decrease (93.14 ± 1.75%) of petroleum sludge with sufficient count of hydrocarbon utilizers and decreased nutrients in 42 days was reported. Quality improvement of petroleum sludge contaminated agricultural soil after its bioremediation was performed by pot experiments by checking germination of V. radiata seeds. 85.71% germination of seeds in 5 days was noted for treated soil. Thus, HUBC can be applied as a bioremediating consortium to reclaim petroleum sludge polluted soil.
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Affiliation(s)
- Sunita Varjani
- Gujarat Pollution Control Board, Gandhinagar 382010, Gujarat, India.
| | - Ashok Pandey
- CSIR-Indian Institute of Toxicology Research, Lucknow 226 001, India
| | - Vivek N Upasani
- Department of Microbiology, M. G. Science Institute, Ahmedabad 380009, Gujarat, India
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Zang T, Wu H, Yan B, Zhang Y, Wei C. Enhancement of PAHs biodegradation in biosurfactant/phenol system by increasing the bioavailability of PAHs. CHEMOSPHERE 2021; 266:128941. [PMID: 33190915 DOI: 10.1016/j.chemosphere.2020.128941] [Citation(s) in RCA: 26] [Impact Index Per Article: 8.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/05/2020] [Revised: 10/07/2020] [Accepted: 11/08/2020] [Indexed: 05/27/2023]
Abstract
The poor bioavailability of polycyclic aromatic hydrocarbons (PAHs) is the main limiting factor for their biodegradation in contaminated sites. The addition of biosurfactant is an effective method for enhancing the bioavailability of PAHs. Suitable low molecular weight (LMW) organic matters have been shown to increase the bioavailability of PAHs. Therefore, we investigated the effect of phenol, which often co-exists with PAHs, on the biodegradation of PAHs in biosurfactant solution. The results show that the critical micelle concentration (CMC) of the biosurfactant decreased after phenol was added. The formation of mixed micelles resulted in enhancement of PAHs dissolution. The weight solubilization ratio (WSR) values of biosurfactant for Phe, Pyr and BaP in phenol solution are approximately 1.34, 1.40 and 1.67 times that of the control group, respectively. Phenol, therefore, can assist biosurfactant to increase the availability of PAHs by microbes. The bioavailability of PAHs in sludge increased from 27.7% to 43.1% after the biosurfactant was added, and reached a maximum of 49.2%, following the simultaneous addition of phenol and biosurfactant. Phenol also improved the degradation of PAHs by Stenotrophomonas sp. N5 in biosurfactant solution.
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Affiliation(s)
- Tingting Zang
- State Key Laboratory of Organic Geochemistry, Guangzhou Institute of Geochemistry, Chinese Academy of Sciences, Guangzhou, 510640, PR China; University of Chinese Academy of Sciences, Beijing, 100049, PR China
| | - Haizhen Wu
- State Key Laboratory of Organic Geochemistry, Guangzhou Institute of Geochemistry, Chinese Academy of Sciences, Guangzhou, 510640, PR China; School of Biology and Biological Engineering, South China University of Technology, Guangzhou, 510006, PR China.
| | - Bo Yan
- State Key Laboratory of Organic Geochemistry, Guangzhou Institute of Geochemistry, Chinese Academy of Sciences, Guangzhou, 510640, PR China; The Environmental Research Institute, MOE Key Laboratory of Theoretical Chemistry of Environment, South China Normal University, Guangzhou, 510006, PR China
| | - Yuxiu Zhang
- State Key Laboratory of Organic Geochemistry, Guangzhou Institute of Geochemistry, Chinese Academy of Sciences, Guangzhou, 510640, PR China; University of Chinese Academy of Sciences, Beijing, 100049, PR China
| | - Chaohai Wei
- State Key Laboratory of Organic Geochemistry, Guangzhou Institute of Geochemistry, Chinese Academy of Sciences, Guangzhou, 510640, PR China; School of Environment and Energy, South China University of Technology, Guangzhou, 510006, PR China
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Hu F, Liu Y, Lin J, Wang W, Yu D, Li S. Acetoin modulates conformational change of surfactin: Interfacial assembly and crude oil-washing performance. Colloids Surf B Biointerfaces 2021; 200:111602. [PMID: 33571865 DOI: 10.1016/j.colsurfb.2021.111602] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/06/2020] [Revised: 12/21/2020] [Accepted: 01/30/2021] [Indexed: 11/20/2022]
Abstract
Due to its special structure, the cyclic lipopeptide surfactin showed remarkable responsiveness to stimuli such as pH, temperature and metal ions. However, few studies investigated the effect of fermented by-products on the conformational change and interfacial assembly of surfactin. Here, the effect of acetoin, a primary metabolite of Bacillus subtilis, on the conformational change and interfacial assembly of surfactin was studied in detail. Surface tension measurements showed that the critical micelle concentration (CMC) of surfactin increased from 1.14 × 10-5 to 4.32 × 10-5 M in the presence of acetoin. Moreover, acetoin has increased the interfacial tension of surfactin aqueous solution-crude oil from 1.08 mN/m to 3.01 mN/m. Circular dichroism (CD) spectra and dynamic light-scattering (DLS) further demonstrated that acetoin had induced the conformational transition of surfactin from β-sheet to β-turn structure, and caused surfactin forming some larger micelle aggregations. Afterwards, it was further found that acetoin decreased the oil sand cleaning efficiency of surfactin from 59.7% to 6.6%, and deteriorated the O/W emulsion stability and altered the silicate wettability toward less water wet state. Based on the experimental results, a possible mechanism of the interaction between surfactin and acetoin was proposed.
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Affiliation(s)
- Fangxiang Hu
- College of Biotechnology and Pharmaceutical Engineering, Nanjing Tech University, Nanjing, 211816, PR China
| | - Yuyue Liu
- College of Biotechnology and Pharmaceutical Engineering, Nanjing Tech University, Nanjing, 211816, PR China
| | - Junzhang Lin
- Oil Production Research Institute, Shengli Oil Field Ltd. Co. Sinopec, Dongying, 257000, PR China
| | - Weidong Wang
- Oil Production Research Institute, Shengli Oil Field Ltd. Co. Sinopec, Dongying, 257000, PR China
| | - Dinghua Yu
- College of Biotechnology and Pharmaceutical Engineering, Nanjing Tech University, Nanjing, 211816, PR China.
| | - Shuang Li
- College of Biotechnology and Pharmaceutical Engineering, Nanjing Tech University, Nanjing, 211816, PR China.
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Ni Z, Zhang C, Wang Z, Zhao S, Fan X, Jia H. Performance and potential mechanism of transformation of polycyclic aromatic hydrocarbons (PAHs) on various iron oxides. JOURNAL OF HAZARDOUS MATERIALS 2021; 403:123993. [PMID: 33265030 DOI: 10.1016/j.jhazmat.2020.123993] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/09/2020] [Revised: 08/20/2020] [Accepted: 09/12/2020] [Indexed: 06/12/2023]
Abstract
The abiotic transformation of polycyclic aromatic hydrocarbons (PAHs) is significantly impacted by soil components, especially inorganic redox species like iron oxides. In this study, the catalytic activities of three types of iron oxides in PAHs degradation without light irradiation were evaluated using a combination of experimental techniques. The results showed that α-Fe2O3 possessed the highest transformation rate for anthracene (ANT), with a reaction rate constant (Kobs) up to 0.28 d-1, followed by Fe3O4 (Kobs = 0.06 d-1) and α-FeOOH (Kobs = 0.06 d-1). X-ray photoelectron spectroscopy (XPS) characterization suggested that α-Fe2O3 had the highest oxygen vacancy concentration, which was conducive to the adsorption of O2 by α-Fe2O3, providing sufficient adsorbed oxygen species. Oxygen vacancy contributed to the exposure of Fe(III), and accordingly, more active sites were created that were responsible for ANT degradation. According to these results, two possible pathways for the degradation of PAHs on iron oxides can be concluded: (1) direct oxidation by Fe(III) and (2) oxidation by the O2•- generated onto oxygen vacancies. This study provides significant insights into the environmental fate of PAHs on iron oxides, and raises the possibility that iron oxides may be used as catalytic materials in the remediation PAHs-contaminated soil.
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Affiliation(s)
- Zheng Ni
- College of Resources and Environment, Northwest A & F University, Yangling 712100, China
| | - Chi Zhang
- College of Resources and Environment, Northwest A & F University, Yangling 712100, China; Key Laboratory of Plant Nutrition and the Agri-environment in Northwest China, Ministry of Agriculture, Yangling, Shaanxi 712100, China
| | - Zhiqiang Wang
- College of Resources and Environment, Northwest A & F University, Yangling 712100, China
| | - Song Zhao
- College of Resources and Environment, Northwest A & F University, Yangling 712100, China
| | - Xiaoyun Fan
- Jinan University, School of Environment, Guangdong Province Key Lab Environment Pollution & Health, Guangzhou 510632, China.
| | - Hanzhong Jia
- College of Resources and Environment, Northwest A & F University, Yangling 712100, China; Key Laboratory of Plant Nutrition and the Agri-environment in Northwest China, Ministry of Agriculture, Yangling, Shaanxi 712100, China.
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Ray M, Kumar V, Banerjee C, Gupta P, Singh S, Singh A. Investigation of biosurfactants produced by three indigenous bacterial strains, their growth kinetics and their anthracene and fluorene tolerance. ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY 2021; 208:111621. [PMID: 33396141 DOI: 10.1016/j.ecoenv.2020.111621] [Citation(s) in RCA: 14] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/24/2020] [Revised: 10/31/2020] [Accepted: 11/04/2020] [Indexed: 06/12/2023]
Abstract
The study explored the polycyclic aromatic hydrocarbon tolerance of indigenous biosurfactant producing microorganisms. Three bacterial species were isolated from crude oil contaminated sites of Haldia, West Bengal. The three species were screened for biosurfactant production and identified by 16S rRNA sequencing as Brevundimonas sp. IITISM 11, Pseudomonas sp. IITISM 19 and Pseudomonas sp. IITISM 24. The strains showed emulsification activities of 51%, 57% and 63%, respectively. The purified biosurfactants were characterised using FT-IR, GC-MS and NMR spectroscopy and found to have structural similarities to glycolipopeptides, cyclic lipopeptides and glycolipids. The biosurfactants produced were found to be stable under a wide range of temperature (0-100 °C), pH (4-12) and salinity (up to 20% NaCl). Moreover, the strains displayed tolerance to high concentrations (275 mg/L) of anthracene and fluorene and showed a good amount of cell surface hydrophobicity with different hydrocarbons. The study reports the production and characterisation of biosurfactant by Brevundimonas sp. for the first time. Additionally, the kinetic parameters of the bacterial strains grown on up to 300 mg/L concentration of anthracene and fluorene, ranged between 0.0131 and 0.0156 µmax (h-1), while the Ks(mg/L) ranged between 59.28 and 102.66 for Monod's Model. For Haldane-Andrew's model, µmax (h-1) varied between 0.0168 and 0.0198. The inhibition constant was highest for Pseudomonas sp. IITISM 19 on anthracene and Brevundimonas sp. IITISM 11 on fluorene. The findings of the study suggest that indigenous biosurfactant producing strains have tolerance to high PAH concentrations and can be exploited for bioremediation purposes.
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Affiliation(s)
- Madhurya Ray
- Labortaory of Applied Microbiology, Department of Environmental Science and Engineering, Indian Institute of Technology (Indian School of Mines), Dhanbad, Jharkhand, India
| | - Vipin Kumar
- Labortaory of Applied Microbiology, Department of Environmental Science and Engineering, Indian Institute of Technology (Indian School of Mines), Dhanbad, Jharkhand, India.
| | - Chiranjib Banerjee
- Laboratory of Bio-energy, Department of Environmental Science and Engineering, Indian Institute of Technology (Indian School of Mines), Dhanbad, Jharkhand, India
| | - Pratishtha Gupta
- Labortaory of Applied Microbiology, Department of Environmental Science and Engineering, Indian Institute of Technology (Indian School of Mines), Dhanbad, Jharkhand, India
| | - Shalini Singh
- Labortaory of Applied Microbiology, Department of Environmental Science and Engineering, Indian Institute of Technology (Indian School of Mines), Dhanbad, Jharkhand, India
| | - Ankur Singh
- Labortaory of Applied Microbiology, Department of Environmental Science and Engineering, Indian Institute of Technology (Indian School of Mines), Dhanbad, Jharkhand, India
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Varjani S, Upasani VN. Bioaugmentation of Pseudomonas aeruginosa NCIM 5514 - A novel oily waste degrader for treatment of petroleum hydrocarbons. BIORESOURCE TECHNOLOGY 2021; 319:124240. [PMID: 33254463 DOI: 10.1016/j.biortech.2020.124240] [Citation(s) in RCA: 35] [Impact Index Per Article: 11.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/03/2020] [Revised: 10/04/2020] [Accepted: 10/05/2020] [Indexed: 06/12/2023]
Abstract
This study was aimed at remediation ofoily waste contaminated area by utilizing a newly obtained bacterium. For experimental setup three different approachessuch as bioaugmentation, natural attenuation and abiotic factors were employed. In bioaugmented experimental set up (treatment withP. aeruginosaNCIM 5514),76.14 ± 0.85% loss in oily waste with notable hydrocarbon utilizers was noted in 56 days. From the results, it was concluded that bioaugmentation with novel P. aeruginosasp. (oily waste degrader) could remediate oily waste pollution effectively. Results of this study demonstrate applicability of P. aeruginosa NCIM 5514 for environmental sustainability.
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Affiliation(s)
- Sunita Varjani
- Gujarat Pollution Control Board, Gandhinagar 382010, Gujarat, India.
| | - Vivek N Upasani
- Department of Microbiology, M. G. Science Institute, Ahmedabad 380009, Gujarat, India
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Ahmad Z, Zhang X, Imran M, Zhong H, Andleeb S, Zulekha R, Liu G, Ahmad I, Coulon F. Production, functional stability, and effect of rhamnolipid biosurfactant from Klebsiella sp. on phenanthrene degradation in various medium systems. ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY 2021; 207:111514. [PMID: 33254394 DOI: 10.1016/j.ecoenv.2020.111514] [Citation(s) in RCA: 26] [Impact Index Per Article: 8.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/29/2020] [Revised: 10/10/2020] [Accepted: 10/13/2020] [Indexed: 06/12/2023]
Abstract
The present study investigated the stability and efficacy of a biosurfactant produced by Klebsiella sp. KOD36 under extreme conditions and its potential for enhancing the solubilization and degradation of phenanthrene in various environmental matrices. Klebsiella sp. KOD36 produced a mono-rhamnolipids biosurfactant with a low critical micelle concentration (CMC) value. The biosurfactant was stable under extreme conditions (60 °C, pH 10 and 10% salinity) and could lower surface tension by 30% and maintained an emulsification index of > 40%. The emulsion index was also higher (17-43%) in the presence of petroleum hydrocarbons compared to synthetic surfactant Triton X-100. Investigation on phenanthrene degradation in three different environmental matrices (aqueous, soil-slurry and soil) confirmed that the biosurfactant enhanced the solubilization and biodegradation of phenanthrene in all matrices. The high functional stability and performance of the biosurfactant under extreme conditions on phenanthrene degradation show the great potential of the biosurfactant for remediation applications under harsh environmental conditions.
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Affiliation(s)
- Zulfiqar Ahmad
- State Key Laboratory of Water Resources and Hydropower Engineering Science, Wuhan University, Wuhan, Hubei 430072, China; Key Laboratory for Algal Biology, Institute of Hydrobiology, Chinese Academy of Sciences, Wuhan 430072, China
| | - Xuezhi Zhang
- Key Laboratory for Algal Biology, Institute of Hydrobiology, Chinese Academy of Sciences, Wuhan 430072, China
| | - Muhammad Imran
- Soil and Environmental Sciences Division, Nuclear Institute for Agriculture and Biology, Faisalabad 38000, Pakistan
| | - Hua Zhong
- State Key Laboratory of Water Resources and Hydropower Engineering Science, Wuhan University, Wuhan, Hubei 430072, China.
| | - Shaista Andleeb
- School of Resources and Environmental Engineering, Wuhan University of Technology, Wuhan, Hubei 430070, China
| | - Rabail Zulekha
- Key Laboratory for Algal Biology, Institute of Hydrobiology, Chinese Academy of Sciences, Wuhan 430072, China
| | - Guansheng Liu
- State Key Laboratory of Water Resources and Hydropower Engineering Science, Wuhan University, Wuhan, Hubei 430072, China
| | - Iftikhar Ahmad
- Department of Environmental Sciences, COMSATS Institute of Information Technology, Vehari 61100, Pakistan
| | - Frederic Coulon
- School of Water, Energy and Environment, Cranfield University, Cranfield, Bedfordshire MK43 0AL, UK
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Varjani S, Pandey A, Upasani VN. Oilfield waste treatment using novel hydrocarbon utilizing bacterial consortium - A microcosm approach. THE SCIENCE OF THE TOTAL ENVIRONMENT 2020; 745:141043. [PMID: 32717605 DOI: 10.1016/j.scitotenv.2020.141043] [Citation(s) in RCA: 25] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/11/2020] [Revised: 07/09/2020] [Accepted: 07/16/2020] [Indexed: 06/11/2023]
Abstract
Oily sludge is a hazardous waste generated through petroleum producing and processing industrial units. Due to its harmful environmental impacts, it needs to be treated in sustainable manner. The present study aimed to evaluate influence of bioaugmentation on oily sludge biodegradation efficiency of a novel hydrocarbon utilizing bacterial consortium (HUBC) using microcosms. Three approaches (bioaugmentation, natural attenuation and abiotic factors) were used for microcosm studies. Bioaugmentation treatment showed best results for oily sludge degradation than natural attenuation and abiotic factors, resulting 82.13 ± 1.21% oily sludge degradation in 56 days. In bioaugmented microcosm on 56th day 0.30 ± 0.07 × 108 CFU/g hydrocarbon utilizing bacteria were noted. Results showed that HUBC could be used to remediate soil polluted with oily sludge. This study imparts a notable approach for farming application(s).
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Affiliation(s)
- Sunita Varjani
- Gujarat Pollution Control Board, Gandhinagar 382010, Gujarat, India.
| | - Ashok Pandey
- Centre of Innovation and Translation Research, CSIR-Indian Institute of Toxicology Research, Lucknow 226 001, India
| | - Vivek N Upasani
- Department of Microbiology, M. G. Science Institute, Ahmedabad 380009, Gujarat, India
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Patel AB, Shaikh S, Jain KR, Desai C, Madamwar D. Polycyclic Aromatic Hydrocarbons: Sources, Toxicity, and Remediation Approaches. Front Microbiol 2020; 11:562813. [PMID: 33224110 PMCID: PMC7674206 DOI: 10.3389/fmicb.2020.562813] [Citation(s) in RCA: 377] [Impact Index Per Article: 94.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/16/2020] [Accepted: 10/06/2020] [Indexed: 12/13/2022] Open
Abstract
Polycyclic aromatic hydrocarbons (PAHs) are widespread across the globe mainly due to long-term anthropogenic sources of pollution. The inherent properties of PAHs such as heterocyclic aromatic ring structures, hydrophobicity, and thermostability have made them recalcitrant and highly persistent in the environment. PAH pollutants have been determined to be highly toxic, mutagenic, carcinogenic, teratogenic, and immunotoxicogenic to various life forms. Therefore, this review discusses the primary sources of PAH emissions, exposure routes, and toxic effects on humans, in particular. This review briefly summarizes the physical and chemical PAH remediation approaches such as membrane filtration, soil washing, adsorption, electrokinetic, thermal, oxidation, and photocatalytic treatments. This review provides a detailed systematic compilation of the eco-friendly biological treatment solutions for remediation of PAHs such as microbial remediation approaches using bacteria, archaea, fungi, algae, and co-cultures. In situ and ex situ biological treatments such as land farming, biostimulation, bioaugmentation, phytoremediation, bioreactor, and vermiremediation approaches are discussed in detail, and a summary of the factors affecting and limiting PAH bioremediation is also discussed. An overview of emerging technologies employing multi-process combinatorial treatment approaches is given, and newer concepts on generation of value-added by-products during PAH remediation are highlighted in this review.
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Affiliation(s)
- Avani Bharatkumar Patel
- Post Graduate Department of Biosciences, UGC Centre of Advanced Study, Sardar Patel University, Anand, India
| | - Shabnam Shaikh
- P. D. Patel Institute of Applied Sciences, Charotar University of Science and Technology, Anand, India
| | - Kunal R. Jain
- Post Graduate Department of Biosciences, UGC Centre of Advanced Study, Sardar Patel University, Anand, India
| | - Chirayu Desai
- P. D. Patel Institute of Applied Sciences, Charotar University of Science and Technology, Anand, India
| | - Datta Madamwar
- Post Graduate Department of Biosciences, UGC Centre of Advanced Study, Sardar Patel University, Anand, India
- P. D. Patel Institute of Applied Sciences, Charotar University of Science and Technology, Anand, India
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Varjani S, Upasani VN, Pandey A. Bioremediation of oily sludge polluted soil employing a novel strain of Pseudomonas aeruginosa and phytotoxicity of petroleum hydrocarbons for seed germination. THE SCIENCE OF THE TOTAL ENVIRONMENT 2020; 737:139766. [PMID: 32526573 DOI: 10.1016/j.scitotenv.2020.139766] [Citation(s) in RCA: 60] [Impact Index Per Article: 15.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/05/2020] [Revised: 05/24/2020] [Accepted: 05/26/2020] [Indexed: 06/11/2023]
Abstract
Agricultural land pollution is key a problem globally, which is linked with growth of industries. Petroleum industrial sector is one of the major industrial sectors and the activities of petroleum industry lead to the agricultural land pollution. Oily sludge is a type of solid and hazardous waste generated from petroleum industrial activities. Hence, there is an urgent need to find remediation methods of the oily sludge contaminated agricultural land. Thus, the aim of this work was to study bioremediation of oily sludge polluted soil employing a novel strain of Pseudomonas aeruginosa and evaluation of phytotoxicity on germination of Vigna radiata seed in pots. Five different approaches were adopted for the bioremediation studies, which included Bioaugmentation + Biostimulation, bioaugmentation, biostimulation, natural attenuation and abiotic factors. Simultaneous application of P. aeruginosa NCIM 5514 and nutrients in microcosm showed 92.97 ± 0.92% decrease in oily sludge with good hydrocarbon utilizing bacterial count and decreased nutrient level in 56 days. Pot experiments on seed germination of mung beans (Vigna radiata) seeds was performed by pot experiments. 80.95% germination in five days in treated soil. From the results it was concluded that simultaneous use of oily sludge degraders and nutrient supplement could revive seed germination ability of oily sludge polluted soil effectively. This is first report of comparing five techniques to bioremediate oily sludge polluted soil using Pseudomonas aeruginosa, followed by pot study using V. radiata seeds, showing that P. aeruginosa can be an efficient bioremediation agent and can be effectively used for remediation of oily sludge contaminated soil.
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Affiliation(s)
- Sunita Varjani
- Gujarat Pollution Control Board, Gandhinagar 382010, Gujarat, India.
| | - Vivek N Upasani
- Department of Microbiology, M. G. Science Institute, Ahmedabad 380009, Gujarat, India
| | - Ashok Pandey
- Centre for Innovation and Translational Research, CSIR-Indian Institute of Toxicology Research, Lucknow 226 001, India
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Tüccar T, Ilhan-Sungur E, Muyzer G. Bacterial Community Composition in Produced Water of Diyarbakır Oil Fields in Turkey : Bacterial communities in produced waters of south-eastern Turkey reported in detail for the first time. JOHNSON MATTHEY TECHNOLOGY REVIEW 2020. [DOI: 10.1595/205651320x15911723486216] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Abstract
Oil fields harbour a wide variety of microorganisms with different metabolic capabilities. To examine the microbial ecology of petroleum reservoirs, a molecular-based approach was used to assess the composition of bacterial communities in produced water of Diyarbakır oil fields
in Turkey. Denaturing gradient gel electrophoresis (DGGE) of polymerase chain reaction (PCR)-amplified 16S rRNA gene fragments was performed to characterise the bacterial community structure of produced water samples and to identify predominant community members after sequencing of separated
DGGE bands. The majority of bacterial sequences retrieved from DGGE analysis of produced water samples belonged to unclassified bacteria (50%). Among the classified bacteria, Proteobacteria (29.2%), Firmicutes (8.3%), Bacteroidetes (8.3%) and Actinobacteria (4.2%)
groups were identified. Pseudomonas was the dominant genus detected in the produced water samples. The results of this research provide, for the first time, insight into the complexity of microbial communities in the Diyarbakır oil reservoirs and their dominant constituents.
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Affiliation(s)
- Tuğçe Tüccar
- Department of Biology, Institute of Graduate Studies in Sciences, Istanbul University 34134, Vezneciler Istanbul, Turkey
| | - Esra Ilhan-Sungur
- Department of Biology, Faculty of Science, Istanbul University 34134, Vezneciler Istanbul, Turkey
| | - Gerard Muyzer
- Department of Biotechnology, Delft University of Technology van der Maasweg 9, 2629 HZ Delft The Netherlands
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