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Shomali A, Aliniaeifard S, Kamrani YY, Lotfi M, Aghdam MS, Rastogi A, Brestič M. Interplay among photoreceptors determines the strategy of coping with excess light in tomato. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2024; 118:1423-1438. [PMID: 38402588 DOI: 10.1111/tpj.16685] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/04/2023] [Revised: 01/30/2024] [Accepted: 02/05/2024] [Indexed: 02/27/2024]
Abstract
This study investigates photoreceptor's role in the adaption of photosynthetic apparatus to high light (HL) intensity by examining the response of tomato wild type (WT) (Solanum lycopersicum L. cv. Moneymaker) and tomato mutants (phyA, phyB1, phyB2, cry1) plants to HL. Our results showed a photoreceptor-dependent effect of HL on the maximum quantum yield of photosystem II (Fv/Fm) with phyB1 exhibiting a decrease, while phyB2 exhibiting an increase in Fv/Fm. HL resulted in an increase in the efficient quantum yield of photosystem II (ΦPSII) and a decrease in the non-photochemical quantum yields (ΦNPQ and ΦN0) solely in phyA. Under HL, phyA showed a significant decrease in the energy-dependent quenching component of NPQ (qE), while phyB2 mutants showed an increase in the state transition (qT) component. Furthermore, ΔΔFv/Fm revealed that PHYB1 compensates for the deficit of PHYA in phyA mutants. PHYA signaling likely emerges as the dominant effector of PHYB1 and PHYB2 signaling within the HL-induced signaling network. In addition, PHYB1 compensates for the role of CRY1 in regulating Fv/Fm in cry1 mutants. Overall, the results of this research provide valuable insights into the unique role of each photoreceptor and their interplay in balancing photon energy and photoprotection under HL condition.
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Affiliation(s)
- Aida Shomali
- Photosynthesis Laboratory, Department of Horticulture, College of Aburaihan, University of Tehran, Tehran, Iran
| | - Sasan Aliniaeifard
- Photosynthesis Laboratory, Department of Horticulture, College of Aburaihan, University of Tehran, Tehran, Iran
- Controlled Environment Agriculture Center (CEAC), College of Agriculture and Natural Resources, University of Tehran, Tehran, Iran
| | - Yousef Yari Kamrani
- Experimental Biophysics, Institute for Biology, Humboldt-University of Berlin, Invaliden Str. 42, 10115, Berlin, Germany
| | - Mahmoud Lotfi
- Photosynthesis Laboratory, Department of Horticulture, College of Aburaihan, University of Tehran, Tehran, Iran
| | | | - Anshu Rastogi
- Laboratory of Bioclimatology, Department of Ecology and Environmental Protection, Faculty of Environmental Engineering and Mechanical Engineering, Poznan University of Life Sciences, Piątkowska 94, 60-649, Poznań, Poland
| | - Marian Brestič
- Department of Plant Physiology, Faculty of Agrobiology and Food Resources, Slovak University of Agriculture, A. Hlinku 2, Nitra, 949 76, Slovak Republic
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Shomali A, De Diego N, Zhou R, Abdelhakim L, Vrobel O, Tarkowski P, Aliniaeifard S, Kamrani YY, Ji Y, Ottosen CO. The crosstalk of far-red energy and signaling defines the regulation of photosynthesis, growth, and flowering in tomatoes. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2024; 208:108458. [PMID: 38408395 DOI: 10.1016/j.plaphy.2024.108458] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/29/2023] [Revised: 02/08/2024] [Accepted: 02/20/2024] [Indexed: 02/28/2024]
Abstract
This study investigated the effect of light intensity and signaling on the regulation of far-red (FR)-induced alteration in photosynthesis. The low (LL: 440 μmol m-2 s-1) and high (HL: 1135 μmol m-2 s-1) intensity of white light with or without FR (LLFR: 545 μmol m-2 s-1 including 115 μmol m-2 s-1; HLFR: 1254 μmol m-2 s-1 + 140 μmol m-2 s-1) was applied on the tomato cultivar (Solanum Lycopersicon cv. Moneymaker) and mutants of phytochrome A (phyA) and phytochrome B (phyB1, and phyB2). Both light intensity and FR affected plant morphological traits, leaf biomass, and flowering time. Irrespective of genotype, flowering was delayed by LLFR and accelerated by HLFR compared to the corresponding light intensity without FR. In LLFR, a reduced energy flux through the electron transfer chain along with a reduced energy dissipation per reaction center improved the maximum quantum yield of PSII, irrespective of genotype. HLFR increased net photosynthesis and gas exchange properties in a genotype-dependent manner. FR-dependent regulation of hormones was affected by light signaling. It appeared that PHYB affected the levels of abscisic acid and salicylic acid while PHYA took part in the regulation of CK in FR-exposed plants. Overall, light intensity and signaling of FR influenced plants' photosynthesis and growth by altering electron transport, gas exchange, and changes in the level of endogenous hormones.
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Affiliation(s)
- Aida Shomali
- Photosynthesis Laboratory, Department of Horticulture, Aburaihan Campus, University of Tehran, Pakdasht, 3391653755, Iran.
| | - Nuria De Diego
- Czech Advanced Technology and Research Institute, Palacky University, Šlechtitelů 27, 78371, Olomouc, Czech Republic
| | - Rong Zhou
- Department of Food Science- Plant, Food & Climate, Aarhus University, Agro Food Park 48, DK-8200, Aarhus N, Denmark
| | - Lamis Abdelhakim
- Department of Food Science- Plant, Food & Climate, Aarhus University, Agro Food Park 48, DK-8200, Aarhus N, Denmark
| | - Ondřej Vrobel
- Czech Advanced Technology and Research Institute, Palacky University, Šlechtitelů 27, 78371, Olomouc, Czech Republic; Centre of the Region Haná for Biotechnological and Agricultural Research, Department of Genetic Resources for Vegetables, Medicinal and Special Plants, Crop Research Institute, Šlechtitelů 29, 78371, Olomouc, Czech Republic
| | - Petr Tarkowski
- Czech Advanced Technology and Research Institute, Palacky University, Šlechtitelů 27, 78371, Olomouc, Czech Republic; Centre of the Region Haná for Biotechnological and Agricultural Research, Department of Genetic Resources for Vegetables, Medicinal and Special Plants, Crop Research Institute, Šlechtitelů 29, 78371, Olomouc, Czech Republic
| | - Sasan Aliniaeifard
- Photosynthesis Laboratory, Department of Horticulture, Aburaihan Campus, University of Tehran, Pakdasht, 3391653755, Iran
| | - Yousef Yari Kamrani
- Institute of Biology, Experimental Biophysics, Humboldt University of Berlin, Berlin, Germany
| | - Yongran Ji
- Horticulture and Product Physiology, Department of Plant Sciences, Wageningen University & Research, PO Box 16, Wageningen, 6700AA, the Netherlands
| | - Carl-Otto Ottosen
- Department of Food Science- Plant, Food & Climate, Aarhus University, Agro Food Park 48, DK-8200, Aarhus N, Denmark
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Stockenhuber R, Akiyama R, Tissot N, Milosavljevic S, Yamazaki M, Wyler M, Arongaus AB, Podolec R, Sato Y, Widmer A, Ulm R, Shimizu KK. UV RESISTANCE LOCUS 8-Mediated UV-B Response Is Required Alongside CRYPTOCHROME 1 for Plant Survival in Sunlight under Field Conditions. PLANT & CELL PHYSIOLOGY 2024; 65:35-48. [PMID: 37757822 PMCID: PMC10799719 DOI: 10.1093/pcp/pcad113] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/29/2021] [Revised: 09/19/2023] [Accepted: 09/26/2023] [Indexed: 09/29/2023]
Abstract
As sessile, photoautotrophic organisms, plants are subjected to fluctuating sunlight that includes potentially detrimental ultraviolet-B (UV-B) radiation. Experiments under controlled conditions have shown that the UV-B photoreceptor UV RESISTANCE LOCUS 8 (UVR8) controls acclimation and tolerance to UV-B in Arabidopsis thaliana; however, its long-term impact on plant fitness under naturally fluctuating environments remain poorly understood. Here, we quantified the survival and reproduction of different Arabidopsis mutant genotypes under diverse field and laboratory conditions. We found that uvr8 mutants produced more fruits than wild type when grown in growth chambers under artificial low-UV-B conditions but not under natural field conditions, indicating a fitness cost in the absence of UV-B stress. Importantly, independent double mutants of UVR8 and the blue light photoreceptor gene CRYPTOCHROME 1 (CRY1) in two genetic backgrounds showed a drastic reduction in fitness in the field. Experiments with UV-B attenuation in the field and with supplemental UV-B in growth chambers demonstrated that UV-B caused the cry1 uvr8 conditional lethal phenotype. Using RNA-seq data of field-grown single and double mutants, we explicitly identified genes showing significant statistical interaction of UVR8 and CRY1 mutations in the presence of UV-B in the field. They were enriched in Gene Ontology categories related to oxidative stress, photoprotection and DNA damage repair in addition to UV-B response. Our study demonstrates the functional importance of the UVR8-mediated response across life stages in natura, which is partially redundant with that of cry1. Moreover, these data provide an integral picture of gene expression associated with plant responses under field conditions.
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Affiliation(s)
- Reinhold Stockenhuber
- Department of Evolutionary Biology and Environmental Studies, University of Zurich, Winterthurerstrasse 190, Zurich 8057, Switzerland
| | - Reiko Akiyama
- Department of Evolutionary Biology and Environmental Studies, University of Zurich, Winterthurerstrasse 190, Zurich 8057, Switzerland
| | - Nicolas Tissot
- Department of Plant Sciences, Section of Biology, Faculty of Sciences, University of Geneva, 30 Quai E. Ansermet, Geneva 1211, Switzerland
- Institute of Genetics and Genomics of Geneva (iGE3), University of Geneva, Geneva 1211, Switzerland
| | - Stefan Milosavljevic
- Department of Evolutionary Biology and Environmental Studies, University of Zurich, Winterthurerstrasse 190, Zurich 8057, Switzerland
- SIB Swiss Institute of Bioinformatics, University of Zurich, Winterthurerstrasse 190, Zurich 8057, Switzerland
| | - Misako Yamazaki
- Department of Evolutionary Biology and Environmental Studies, University of Zurich, Winterthurerstrasse 190, Zurich 8057, Switzerland
| | - Michele Wyler
- Department of Evolutionary Biology and Environmental Studies, University of Zurich, Winterthurerstrasse 190, Zurich 8057, Switzerland
- Department of Plant and Microbial Biology, University of Zurich, Zollikerstrasse 107, Zurich 8008, Switzerland
| | - Adriana B Arongaus
- Department of Plant Sciences, Section of Biology, Faculty of Sciences, University of Geneva, 30 Quai E. Ansermet, Geneva 1211, Switzerland
- Institute of Genetics and Genomics of Geneva (iGE3), University of Geneva, Geneva 1211, Switzerland
| | - Roman Podolec
- Department of Plant Sciences, Section of Biology, Faculty of Sciences, University of Geneva, 30 Quai E. Ansermet, Geneva 1211, Switzerland
- Institute of Genetics and Genomics of Geneva (iGE3), University of Geneva, Geneva 1211, Switzerland
| | - Yasuhiro Sato
- Department of Evolutionary Biology and Environmental Studies, University of Zurich, Winterthurerstrasse 190, Zurich 8057, Switzerland
| | - Alex Widmer
- Institute of Integrative Biology, ETH Zurich, Universitätstrasse 16, Zurich 8092, Switzerland
| | - Roman Ulm
- Department of Plant Sciences, Section of Biology, Faculty of Sciences, University of Geneva, 30 Quai E. Ansermet, Geneva 1211, Switzerland
- Institute of Genetics and Genomics of Geneva (iGE3), University of Geneva, Geneva 1211, Switzerland
| | - Kentaro K Shimizu
- Department of Evolutionary Biology and Environmental Studies, University of Zurich, Winterthurerstrasse 190, Zurich 8057, Switzerland
- Kihara Institute for Biological Research, Yokohama City University, 641-12 Maioka, Totsuka-ward, Yokohama 244-0813, Japan
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Mladenov P, Wang X, Yang Z, Djilianov D, Deng X. Dynamics of chromatin accessibility and genome wide control of desiccation tolerance in the resurrection plant Haberlea rhodopensis. BMC PLANT BIOLOGY 2023; 23:654. [PMID: 38110858 PMCID: PMC10729425 DOI: 10.1186/s12870-023-04673-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/02/2023] [Accepted: 12/08/2023] [Indexed: 12/20/2023]
Abstract
BACKGROUND Drought is one of the main consequences of global climate change and this problem is expected to intensify in the future. Resurrection plants evolved the ability to withstand the negative impact of long periods of almost complete desiccation and to recover at rewatering. In this respect, many physiological, transcriptomic, proteomic and genomic investigations have been performed in recent years, however, few epigenetic control studies have been performed on these valuable desiccation-tolerant plants so far. RESULTS In the present study, for the first time for resurrection plants we provide evidences about the differential chromatin accessibility of Haberlea rhodopensis during desiccation stress by ATAC-seq (Assay for Transposase Accessible Chromatin with high-throughput sequencing). Based on gene similarity between species, we used the available genome of the closely related resurrection plant Dorcoceras hygrometricum to identify approximately nine hundred transposase hypersensitive sites (THSs) in H. rhodopensis. The majority of them corresponds to proximal and distal regulatory elements of different genes involved in photosynthesis, carbon metabolism, synthesis of secondary metabolites, cell signalling and transcriptional regulation, cell growth, cell wall, stomata conditioning, chaperons, oxidative stress, autophagy and others. Various types of binding motifs recognized by several families of transcription factors have been enriched from the THSs found in different stages of drought. Further, we used the previously published RNA-seq data from H. rhodopensis to evaluate the expression of transcription factors putatively interacting with the enriched motifs, and the potential correlation between the identified THS and the expression of their corresponding genes. CONCLUSIONS These results provide a blueprint for investigating the epigenetic regulation of desiccation tolerance in resurrection plant H. rhodopensis and comparative genomics between resurrection and non-resurrection species with available genome information.
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Affiliation(s)
- Petko Mladenov
- State Key Laboratory of Plant Diversity and Specialty Crops, Institute of Botany, Chinese Academy of Sciences, Beijing, 100093, China.
- Agricultural Academy, 8 Dragan Tzankov Blvd, Sofia, 1164, Bulgaria.
| | - Xiaohua Wang
- State Key Laboratory of Plant Diversity and Specialty Crops, Institute of Botany, Chinese Academy of Sciences, Beijing, 100093, China
- China National Botanical Garden, Beijing, 100093, China
| | - Zhaolin Yang
- State Key Laboratory of Plant Diversity and Specialty Crops, Institute of Botany, Chinese Academy of Sciences, Beijing, 100093, China
- China National Botanical Garden, Beijing, 100093, China
- University of Chinese Academy of Sciences, Beijing, 100049, China
| | | | - Xin Deng
- State Key Laboratory of Plant Diversity and Specialty Crops, Institute of Botany, Chinese Academy of Sciences, Beijing, 100093, China.
- China National Botanical Garden, Beijing, 100093, China.
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Shomali A, Aliniaeifard S, Mohammadian M, Lotfi M, Kalaji HM. Genotype-dependent Strategies to "Overcome" Excessive Light: Insights into Non-Photochemical Quenching under High Light Intensity. PHYSIOLOGIA PLANTARUM 2023; 175:e14077. [PMID: 38148223 DOI: 10.1111/ppl.14077] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/15/2023] [Revised: 10/05/2023] [Accepted: 10/27/2023] [Indexed: 12/28/2023]
Abstract
High light (HL) intensities have a significant impact on energy flux and distribution within photosynthetic apparatus. To understand the effect of high light intensity (HL) on the HL tolerance mechanisms in tomatoes, we examined the response of the photosynthesis apparatus of 12 tomato genotypes to HL. A reduced electron transfer per reaction center (ET0 /RC), an increased energy dissipation (DI0 /RC) and non-photochemical quenching (NPQ), along with a reduced maximum quantum yield of photosystem II (FV /FM ), and performance index per absorbed photon (PIABS ) were common HL-induced responses among genotypes; however, the magnitude of those responses was highly genotype-dependent. Tolerant and sensitive genotypes were distinguished based on chlorophyll fluorescence and energy-quenching responses to HL. Tolerant genotypes alleviated excess light through energy-dependent quenching (qE ), resulting in smaller photoinhibitory quenching (qI ) compared to sensitive genotypes. Quantum yield components also shifted under HL, favoring the quantum yield of NPQ (ՓNPQ ) and the quantum yield of basal energy loss (ՓN0 ), while reducing the efficient quantum yield of PSII (ՓPSII ). The impact of HL on tolerant genotypes was less pronounced. While the energy partitioning ratio did not differ significantly between sensitive and tolerant genotypes, the ratio of NPQ components, especially qI , affected plant resilience against HL. These findings provide insights into different patterns of HL-induced NPQ components in tolerant and sensitive genotypes, aiding the development of resilient crops for heterogeneous light conditions.
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Affiliation(s)
- Aida Shomali
- Photosynthesis Laboratory, Department of Horticulture, Aburaihan Campus, University of Tehran, Pakdasht, Iran
| | - Sasan Aliniaeifard
- Photosynthesis Laboratory, Department of Horticulture, Aburaihan Campus, University of Tehran, Pakdasht, Iran
- Controlled Environment Agriculture Center, College of Agriculture and natural resources, University of Tehran, Tehran, Iran
| | - Mohammad Mohammadian
- Photosynthesis Laboratory, Department of Horticulture, Aburaihan Campus, University of Tehran, Pakdasht, Iran
| | - Mahmoud Lotfi
- Photosynthesis Laboratory, Department of Horticulture, Aburaihan Campus, University of Tehran, Pakdasht, Iran
| | - Hazem M Kalaji
- Institute of Technology and Life Sciences, National Research Institute, Raszyn, Poland
- Department of Plant Physiology, Institute of Biology, Warsaw University of Life Sciences, SGGW, Warsaw, Poland
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Sun J, Huang S, Lu Q, Li S, Zhao S, Zheng X, Zhou Q, Zhang W, Li J, Wang L, Zhang K, Zheng W, Feng X, Liu B, Kong F, Xiang F. UV-B irradiation-activated E3 ligase GmILPA1 modulates gibberellin catabolism to increase plant height in soybean. Nat Commun 2023; 14:6262. [PMID: 37805547 PMCID: PMC10560287 DOI: 10.1038/s41467-023-41824-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/23/2022] [Accepted: 09/18/2023] [Indexed: 10/09/2023] Open
Abstract
Plant height is a key agronomic trait that affects yield and is controlled by both phytohormone gibberellin (GA) and ultraviolet-B (UV-B) irradiation. However, whether and how plant height is modulated by UV-B-mediated changes in GA metabolism are not well understood. It has not been reported that the E3 ubiquitin ligase Anaphase Promoting Complex/Cyclosome (APC/C) is involved in the regulation of plant growth in response to environmental factors. We perform a forward genetic screen in soybean and find that a mutation in Glycine max Increased Leaf Petiole Angle1 (GmILPA1), encoding a subunit of the APC/C, lead to dwarfism under UV-B irradiation. UV-B promotes the accumulation of GmILPA1, which ubiquitinate the GA catabolic enzyme GA2 OXIDASE-like (GmGA2ox-like), resulting in its degradation in a UV-B-dependent manner. Another E3 ligase, GmUBL1, also ubiquitinate GmGA2ox-like and enhance the GmILPA1-mediated degradation of GmGA2ox-like, which suggest that GmILPA1-GmGA2ox-like module counteract the UV-B-mediated reduction of bioactive GAs. We also determine that GmILPA1 is a target of selection during soybean domestication and breeding. The deletion (Indel-665) in the promoter might facilitate the adaptation of soybean to high UV-B irradiation. This study indicates that an evolutionary GmILPA1 variant has the capability to develop ideal plant architecture with soybean cultivars.
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Affiliation(s)
- Jiaqi Sun
- The Key Laboratory of Plant Development and Environmental Adaptation Biology, Ministry of Education, School of Life Sciences, Shandong University, Qingdao, 266237, China
| | - Shiyu Huang
- The Key Laboratory of Plant Development and Environmental Adaptation Biology, Ministry of Education, School of Life Sciences, Shandong University, Qingdao, 266237, China
| | - Qing Lu
- The Key Laboratory of Plant Development and Environmental Adaptation Biology, Ministry of Education, School of Life Sciences, Shandong University, Qingdao, 266237, China
| | - Shuo Li
- The Key Laboratory of Plant Development and Environmental Adaptation Biology, Ministry of Education, School of Life Sciences, Shandong University, Qingdao, 266237, China
| | - Shizhen Zhao
- The Key Laboratory of Plant Development and Environmental Adaptation Biology, Ministry of Education, School of Life Sciences, Shandong University, Qingdao, 266237, China
| | - Xiaojian Zheng
- The Key Laboratory of Plant Development and Environmental Adaptation Biology, Ministry of Education, School of Life Sciences, Shandong University, Qingdao, 266237, China
| | - Qian Zhou
- The Key Laboratory of Plant Development and Environmental Adaptation Biology, Ministry of Education, School of Life Sciences, Shandong University, Qingdao, 266237, China
| | - Wenxiao Zhang
- The Key Laboratory of Plant Development and Environmental Adaptation Biology, Ministry of Education, School of Life Sciences, Shandong University, Qingdao, 266237, China
| | - Jie Li
- The Key Laboratory of Plant Development and Environmental Adaptation Biology, Ministry of Education, School of Life Sciences, Shandong University, Qingdao, 266237, China
| | - Lili Wang
- The Key Laboratory of Plant Development and Environmental Adaptation Biology, Ministry of Education, School of Life Sciences, Shandong University, Qingdao, 266237, China
| | - Ke Zhang
- The Key Laboratory of Plant Development and Environmental Adaptation Biology, Ministry of Education, School of Life Sciences, Shandong University, Qingdao, 266237, China
| | - Wenyu Zheng
- The Key Laboratory of Plant Development and Environmental Adaptation Biology, Ministry of Education, School of Life Sciences, Shandong University, Qingdao, 266237, China
| | - Xianzhong Feng
- Key Laboratory of Soybean Molecular Design Breeding, Northeast Institute of Geography and Agroecology, Chinese Academy of Sciences, Changchun, 130000, China.
| | - Baohui Liu
- Guangdong Key Laboratory of Plant Adaptation and Molecular Design, Guangzhou Key Laboratory of Crop Gene Editing, Innovative Center of Molecular Genetics and Evolution, School of Life Sciences, Guangzhou University, Guangzhou, 510006, China.
| | - Fanjiang Kong
- Guangdong Key Laboratory of Plant Adaptation and Molecular Design, Guangzhou Key Laboratory of Crop Gene Editing, Innovative Center of Molecular Genetics and Evolution, School of Life Sciences, Guangzhou University, Guangzhou, 510006, China.
| | - Fengning Xiang
- The Key Laboratory of Plant Development and Environmental Adaptation Biology, Ministry of Education, School of Life Sciences, Shandong University, Qingdao, 266237, China.
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Shomali A, Aliniaeifard S, Bakhtiarizadeh MR, Lotfi M, Mohammadian M, Vafaei Sadi MS, Rastogi A. Artificial neural network (ANN)-based algorithms for high light stress phenotyping of tomato genotypes using chlorophyll fluorescence features. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2023; 201:107893. [PMID: 37459804 DOI: 10.1016/j.plaphy.2023.107893] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/16/2023] [Revised: 06/23/2023] [Accepted: 07/10/2023] [Indexed: 08/13/2023]
Abstract
High light (HL) is a common environmental stress directly imposes photoinhibition on the photosynthesis apparatus. Breeding plants for tolerance against HL is therefore highly demanded. Chlorophyll fluorescence (ChlF) is a sensitive indicator of stress in plants and can be evaluated using OJIP transients. In this study, we compared the ChlF features of plants exposed to HL (1200 μmol m-2 s-1) with that of control plants (300 μmol m-2 s-1). To extract the most reliable ChlF features for discrimination between HL-stressed and non-stressed plants, we applied three artificial neural network (ANN)-based algorithms, namely, Boruta, Support Vector Machine (SVM), and Recursive Feature Elimination (RFE). Feature selection algorithms identified multiple features but only two features, namely the maximal quantum yield of PSII photochemistry (FV/FM) and quantum yield of energy dissipation (ɸD0), remained consistent across all genotypes in control conditions, while exhibited variation in HL. Therefore, considered reliable features for HL stress screening. The selected features were then used for screening 14 tomato genotypes for HL. Genotypes were categorized into three groups, tolerant, semi-tolerant, and sensitive genotypes. Foliar hydrogen peroxide (H2O2) and malondialdehyde (MDA) contents were measured as independent proxies for benchmarking selected features. Tolerant genotypes were attributed with the lowest change in H2O2 and MDA contents, while the sensitive genotypes displayed the highest magnitude of increase in H2O2 and MDA by HL treatment compared to the control. Finally, a FV/FM higher than 0.77 and ɸD0 lower than 0.24 indicates a healthy electron transfer chain (ETC) when tomato plants are exposed to HL.
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Affiliation(s)
- Aida Shomali
- Photosynthesis Laboratory, Department of Horticulture, College of Aburaihan, University of Tehran, Tehran, Iran
| | - Sasan Aliniaeifard
- Photosynthesis Laboratory, Department of Horticulture, College of Aburaihan, University of Tehran, Tehran, Iran; Controlled Environment Agriculture Center, College of Agriculture and Natural Resources, University of Tehran, Tehran, Iran.
| | | | - Mahmoud Lotfi
- Photosynthesis Laboratory, Department of Horticulture, College of Aburaihan, University of Tehran, Tehran, Iran
| | - Mohammad Mohammadian
- Photosynthesis Laboratory, Department of Horticulture, College of Aburaihan, University of Tehran, Tehran, Iran; Controlled Environment Agriculture Center, College of Agriculture and Natural Resources, University of Tehran, Tehran, Iran
| | | | - Anshu Rastogi
- Laboratory of Bioclimatology, Department of Ecology and Environmental Protection, Faculty of Environmental Engineering and Mechanical Engineering, Poznan University of Life Sciences, Piątkowska 94, 60-649, Poznań, Poland
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8
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Fraikin GY, Belenikina NS, Rubin AB. Molecular Bases of Signaling Processes Regulated by Cryptochrome Sensory Photoreceptors in Plants. BIOCHEMISTRY. BIOKHIMIIA 2023; 88:770-782. [PMID: 37748873 DOI: 10.1134/s0006297923060056] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/31/2023] [Revised: 04/28/2023] [Accepted: 05/02/2023] [Indexed: 09/27/2023]
Abstract
The blue-light sensors, cryptochromes, compose the extensive class of flavoprotein photoreceptors, regulating signaling processes in plants underlying their development, growth, and metabolism. In several algae, cryptochromes may act not only as sensory photoreceptors but also as photolyases, catalyzing repair of the UV-induced DNA lesions. Cryptochromes bind FAD as the chromophore at the photolyase homologous region (PHR) domain and contain the cryptochrome C-terminal extension (CCE), which is absent in photolyases. Photosensory process in cryptochrome is initiated by photochemical chromophore conversions, including formation of the FAD redox forms. In the state with the chromophore reduced to neutral radical (FADH×), the photoreceptor protein undergoes phosphorylation, conformational changes, and disengagement from the PHR domain and CCE with subsequent formation of oligomers of cryptochrome molecules. Photooligomerization is a structural basis of the functional activities of cryptochromes, since it ensures formation of their complexes with a variety of signaling proteins, including transcriptional factors and regulators of transcription. Interactions in such complexes change the protein signaling activities, leading to regulation of gene expression and plant photomorphogenesis. In recent years, multiple papers, reporting novel, more detailed information about the molecular mechanisms of above-mentioned processes were published. The present review mainly focuses on analysis of the data contained in these publications, particularly regarding structural aspects of the cryptochrome transitions into photoactivated states and regulatory signaling processes mediated by the cryptochrome photoreceptors in plants.
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Affiliation(s)
| | | | - Andrey B Rubin
- Lomonosov Moscow State University, Moscow, 119991, Russia
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9
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Liaqat W, Altaf MT, Barutçular C, Nawaz H, Ullah I, Basit A, Mohamed HI. Ultraviolet-B radiation in relation to agriculture in the context of climate change: a review. CEREAL RESEARCH COMMUNICATIONS 2023:1-24. [PMID: 37361481 PMCID: PMC10099031 DOI: 10.1007/s42976-023-00375-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 12/15/2022] [Accepted: 04/03/2023] [Indexed: 06/28/2023]
Abstract
Over the past few decades, the amount of ultraviolet-B radiation (UV-B) reaching the earth's surface has been altered due to climate change and stratospheric ozone dynamics. This narrow but highly biologically active spectrum of light (280-320 nm) can affect plant growth and development. Depletion of ozone and climate change are interlinked in a very complicated manner, i.e., significantly contributing to each other. The interaction of climate change, ozone depletion, and changes in UV-B radiation negatively affects the growth, development, and yield of plants. Furthermore, this interaction will become more complex in the coming years. The ozone layer reduction is paving a path for UV-B radiation to impact the surface of the earth and interfere with the plant's normal life by negatively affecting the plant's morphology and physiology. The nature and degree of the future response of the agricultural ecosystem to the decreasing or increasing UV-B radiation in the background of climate change and ozone dynamics are still unclear. In this regard, this review aims to elucidate the effects of enhanced UV-B radiation reaching the earth's surface due to the depletion of the ozone layer on plants' physiology and the performance of major cereals.
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Affiliation(s)
- Waqas Liaqat
- Department of Field Crops, Faculty of Agriculture, Institute of Natural and Applied Sciences, Çukurova University, 01330 Adana, Turkey
| | - Muhammad Tanveer Altaf
- Faculty of Agricultural Sciences and Technology, Department of Plant Protection, Sivas University of Science and Technology, 58140 Sivas, Turkey
| | - Celaleddin Barutçular
- Department of Field Crops, Faculty of Agriculture, Institute of Natural and Applied Sciences, Çukurova University, 01330 Adana, Turkey
| | - Hira Nawaz
- Department of Plant Protection, Faculty of Agriculture, Institute of Natural and Applied Sciences, Çukurova University, 01330 Adana, Turkey
| | - Izhar Ullah
- Department of Horticulture, Faculty of Agriculture, Ondokuz Mayis University, Samsun, Turkey
| | - Abdul Basit
- Department of Horticultural Science, Kyungpook National University, Daegu, 41566 South Korea
| | - Heba I. Mohamed
- Department of Biological and Geological Sciences, Faculty of Education, Ain Shams University, Cairo, 11341 Egypt
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10
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Tao M, Liu S, Li Y, Liu A, Tian J, Liu Y, Fu H, Zhu W. Molecular characterization of a feruloyl-CoA 6'-hydroxylase involved in coumarin biosynthesis in Clematis terniflora DC. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2023; 196:162-170. [PMID: 36709578 DOI: 10.1016/j.plaphy.2023.01.046] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/12/2022] [Revised: 01/05/2023] [Accepted: 01/23/2023] [Indexed: 06/18/2023]
Abstract
Coumarin is an important secondary metabolite that affects plant physiology. It is a lactone of cis-o-hydroxycinnamic acid and widely exists in medicinal plants. Clematis terniflora DC. is a plant belonging to Ranunculaceae and is rich in variety of coumarins. Feruloyl-CoA 6'-hydroxylase has been reported as a key enzyme in the formation of coumarin basic skeleton only in some common plants, however, its evidence in other species is still lacking especially for the biosynthesis of coumarins in C. terniflora. In the present study, we identified a feruloyl-CoA 6'-hydroxylase CtF6'H in C. terniflora, and functional characterization indicated that CtF6'H could hydroxylate feruloyl-CoA to 6-hydroxyferuloyl-CoA. Furthermore, the expression level of CtF6'H was differed among different tissues in C. terniflora, while under UV-B radiation, the level of CtF6'H was increased in the leaves. Biochemical characteristics and subcellular location showed that CtF6'H was mainly present in the cytosol. The crystal structure of CtF6'H was simulated by homology modeling to predict the potential residues affecting enzyme activity. This study provides the additional evidence of feruloyl-CoA 6'-hydroxylase in different plant species and enriches our understanding of biosynthetic mechanism of coumarin in C. terniflora.
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Affiliation(s)
- Minglei Tao
- The Cancer Hospital of the University of Chinese Academy of Sciences (Zhejiang Cancer Hospital), Institute of Basic Medicine and Cancer (IBMC), Chinese Academy of Sciences, Hangzhou, 310022, China; College of Biomedical Engineering & Instrument Science, Zhejiang University, Hangzhou, 310027, China
| | - Shengzhi Liu
- College of Biomedical Engineering & Instrument Science, Zhejiang University, Hangzhou, 310027, China
| | - Yaohan Li
- College of Biomedical Engineering & Instrument Science, Zhejiang University, Hangzhou, 310027, China
| | - Amin Liu
- College of Biomedical Engineering & Instrument Science, Zhejiang University, Hangzhou, 310027, China
| | - Jingkui Tian
- The Cancer Hospital of the University of Chinese Academy of Sciences (Zhejiang Cancer Hospital), Institute of Basic Medicine and Cancer (IBMC), Chinese Academy of Sciences, Hangzhou, 310022, China
| | - Yuchang Liu
- International Center of Zhejiang Fuyang High School, Hangzhou, 311400, China
| | - Hongwei Fu
- College of Life Science, Zhejiang Sci-Tech University, Hangzhou, 310018, China.
| | - Wei Zhu
- The Cancer Hospital of the University of Chinese Academy of Sciences (Zhejiang Cancer Hospital), Institute of Basic Medicine and Cancer (IBMC), Chinese Academy of Sciences, Hangzhou, 310022, China.
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11
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UVB-Pretreatment-Enhanced Cadmium Absorption and Enrichment in Poplar Plants. Int J Mol Sci 2022; 24:ijms24010052. [PMID: 36613496 PMCID: PMC9820001 DOI: 10.3390/ijms24010052] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/16/2022] [Revised: 12/17/2022] [Accepted: 12/19/2022] [Indexed: 12/24/2022] Open
Abstract
The phenomenon of cross adaptation refers to the ability of plants to improve their resistance to other stress after experiencing one type of stress. However, there are limited reports on how ultraviolet radiation B (UVB) pretreatment affects the enrichment, transport, and tolerance of cadmium (Cd) in plants. Since an appropriate UVB pretreatment has been reported to change plant tolerance to stress, we hypothesized that this application could alter plant uptake and tolerance to heavy metals. In this study, a woody plant species, 84K poplar (Populus alba × Populus glandulosa), was pretreated with UVB and then subjected to Cd treatment. The RT-qPCR results indicated that the UVB-treated plants could affect the expression of Cd uptake, transport, and detoxification-related genes in plants, and that the UVB-Pretreatment induced the ability of Cd absorption in plants, which significantly enriched Cd accumulation in several plant organs, especially in the leaves and roots. The above results showed that the UVB-Pretreatment further increased the toxicity of Cd to plants in UVB-Cd group, which was shown as increased leaf malonaldehyde (MDA) and hydrogen peroxide (H2O2) content, as well as downregulated activities of antioxidant enzymes such as Superoxide Dismutase (SOD), Catalase (CAT), and Ascorbate peroxidase (APX). Therefore, poplar plants in the UVB-Cd group presented a decreased photosynthesis and leaf chlorosis. In summary, the UVB treatment improved the Cd accumulation ability of poplar plants, which could provide some guidance for the potential application of forest trees in the phytoremediation of heavy metals in the future.
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Chen Z, Dong Y, Huang X. Plant responses to UV-B radiation: signaling, acclimation and stress tolerance. STRESS BIOLOGY 2022; 2:51. [PMID: 37676395 PMCID: PMC10441900 DOI: 10.1007/s44154-022-00076-9] [Citation(s) in RCA: 10] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/11/2022] [Accepted: 11/22/2022] [Indexed: 09/08/2023]
Abstract
Ultraviolet-B (UV-B) light is an intrinsic part of sunlight that reaches the earth's surface, and affects plant survival and adaptation. How plants respond to UV-B light is regulated by the wavelength, intensity and duration of UV-B radiation, and is also regulated by photosynthetically active radiation perceived by phytochrome and cryptochrome photoreceptors. Non-damaging UV-B light promotes plant photomorphogenesis and UV-B acclimation which enhances plant tolerance against UV-B stress. However, high-level UV-B radiation induces DNA damage, generates reactive oxygen species (ROS) and impairs photosynthesis. Plants have evolved efficient mechanisms to utilize informational UV-B signal, and protect themselves from UV-B stress. UV RESISTANCE LOCUS8 (UVR8) is a conserved plant-specific UV-B photoreceptor. It interacts with CONSTITUTIVELY PHOTOMORPHOGENIC1 (COP1) to initiate UV-B-specific light signaling and regulate UV-B responsive gene expression. A set of transcription factors such as ELONGATED HYPOCOTYL5 (HY5) function downstream of the UVR8-COP1 module to promote seedling de-etiolation for photomorphogenic development and biosynthesis of sunscreen flavonoids for UV-B stress tolerance. In addition to UVR8 signaling pathways, plants subjected to damaging UV-B radiation initiate stress protection and repair mechanisms through UVR8-independent pathways. In this review, we summarize the emerging mechanisms underlying UV-B stress acclimation and protection in plants, primarily revealed in the model plant Arabidopsis thaliana.
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Affiliation(s)
- Zhiren Chen
- State Key Laboratory of Cellular Stress Biology, School of Life Sciences, Faculty of Medicine and Life Sciences, Xiamen University, Xiamen, 361102, China
| | - Yuan Dong
- State Key Laboratory of Cellular Stress Biology, School of Life Sciences, Faculty of Medicine and Life Sciences, Xiamen University, Xiamen, 361102, China
| | - Xi Huang
- State Key Laboratory of Cellular Stress Biology, School of Life Sciences, Faculty of Medicine and Life Sciences, Xiamen University, Xiamen, 361102, China.
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13
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Chu R, Zhang QH, Wei YZ. Effect of enhanced UV-B radiation on growth and photosynthetic physiology of Iris tectorum maxim. PHOTOSYNTHESIS RESEARCH 2022; 153:177-189. [PMID: 35834037 DOI: 10.1007/s11120-022-00933-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/29/2022] [Accepted: 06/13/2022] [Indexed: 06/15/2023]
Abstract
Iris tectorum Maxim. is an important plant that plays a very crucial role in the ecological welfare of wetlands. In this study, the effects of different intensities of UV-B radiation on the growth, photosynthetic pigment content, chlorophyll fluorescence characteristics, chloroplast ultrastructure, and gas exchange parameters of Iris tectorum Maxim. were studied. The results showed that enhanced UV-B radiation had a significant influence on the above-mentioned parameters of iris. Compared with the control, enhanced UV-B radiation caused certain damage to the leaf appearance. With the increasing intensity of radiation, the apparent damage degree became more serious. Enhanced UV-B radiation significantly decreased leaf chlorophyll contents, and the effect accumulated with the exposure time. Enhanced UV-B radiation increased Fo, significantly increased the non-photochemical quenching coefficient NPQ, reduced PSII and Qp, and significantly decreased the Fm, Fv/Fm, and Fv/Fo in leaves. The effect of UV-B radiation on PSII destruction of Iris tectorum Maxim. increased as the radiation intensity increased and the exposure time prolonged. The chloroplast structure was damaged under the enhanced UV-B radiation. More specifically, thylakoid lamellae were distorted, swelling and even blurred, and a large number of starch granules appeared. The effect of the high intensity of radiation on chloroplast ultrastructure was greater than that of lower intensity. Enhanced UV-B radiation reduced significantly the net photosynthetic rate, stomatal conductance, and transpiration rate, and the degree of degradation increased with the increasing irradiation intensity. However, the intercellular CO2 content increased, which suggests that the main reason for the decrease of photosynthetic rate was the non-stomatal factors.
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Affiliation(s)
- Run Chu
- College of Resources and Environmental Sciences, Gansu Agricultural University, Lanzhou, 730070, China.
| | - Qin-Hu Zhang
- College of Resources and Environmental Sciences, Gansu Agricultural University, Lanzhou, 730070, China
| | - Yu-Zhen Wei
- College of Resources and Environmental Sciences, Gansu Agricultural University, Lanzhou, 730070, China
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14
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Jessup LH, Halloway AH, Mickelbart MV, McNickle GG. Information theory and plant ecology. OIKOS 2022. [DOI: 10.1111/oik.09352] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Laura H. Jessup
- Dept of Forestry and Natural Resources, Purdue Univ. West Lafayette IN USA
- Dept of Ecological Sciences and Engineering, Purdue Univ. West Lafayette IN USA
| | - Abdel H. Halloway
- Dept of Botany and Plant Pathology, Purdue Univ. West Lafayette IN USA
- Purdue Center for Plant Biology, Purdue Univ. West Lafayette IN USA
| | - Michael V. Mickelbart
- Dept of Botany and Plant Pathology, Purdue Univ. West Lafayette IN USA
- Purdue Center for Plant Biology, Purdue Univ. West Lafayette IN USA
| | - Gordon G. McNickle
- Dept of Botany and Plant Pathology, Purdue Univ. West Lafayette IN USA
- Purdue Center for Plant Biology, Purdue Univ. West Lafayette IN USA
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15
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Podolec R, Wagnon TB, Leonardelli M, Johansson H, Ulm R. Arabidopsis B-box transcription factors BBX20-22 promote UVR8 photoreceptor-mediated UV-B responses. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2022; 111:422-439. [PMID: 35555928 PMCID: PMC9541035 DOI: 10.1111/tpj.15806] [Citation(s) in RCA: 12] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/04/2022] [Revised: 04/26/2022] [Accepted: 05/10/2022] [Indexed: 06/01/2023]
Abstract
Plants undergo photomorphogenic development in the presence of light. Photomorphogenesis is repressed by the E3 ubiquitin ligase CONSTITUTIVELY PHOTOMORPHOGENIC 1 (COP1), which binds to substrates through their valine-proline (VP) motifs. The UV RESISTANCE LOCUS 8 (UVR8) photoreceptor senses UV-B and inhibits COP1 through the cooperative binding of its own VP motif and photosensing core to COP1, thereby preventing COP1 binding to substrates, including the basic leucine zipper (bZIP) transcriptional regulator ELONGATED HYPOCOTYL 5 (HY5). As a key promoter of visible light and UV-B photomorphogenesis, HY5 requires coregulators for its function. The B-box family transcription factors BBX20-BBX22 were recently described as HY5 rate-limiting coactivators under red light, but their role in UVR8 signaling was unknown. Here we describe a hypermorphic bbx21-3D mutant with enhanced photomorphogenesis, carrying a proline-to-leucine mutation at position 314 in the VP motif that impairs the interaction with and regulation by COP1. We show that BBX21 and BBX22 are UVR8-dependently stabilized after UV-B exposure, which is counteracted by a repressor induced by HY5/BBX activity. bbx20 bbx21 bbx22 mutants under UV-B are impaired in hypocotyl growth inhibition, photoprotective pigment accumulation and the expression of several HY5-dependent genes under continuous UV-B, but the immediate induction of marker genes after exposure to UV-B remains surprisingly rather unaffected. We conclude that BBX20-BBX22 contribute to HY5 activity in a subset of UV-B responses, but that additional, presently unknown, coactivators for HY5 are functional in early UVR8 signaling.
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Affiliation(s)
- Roman Podolec
- Department of Botany and Plant Biology, Section of Biology, Faculty of SciencesUniversity of GenevaCH‐1211Geneva 4Switzerland
- Institute of Genetics and Genomics of Geneva (iGE3)University of GenevaGenevaSwitzerland
| | - Timothée B. Wagnon
- Department of Botany and Plant Biology, Section of Biology, Faculty of SciencesUniversity of GenevaCH‐1211Geneva 4Switzerland
| | - Manuela Leonardelli
- Department of Botany and Plant Biology, Section of Biology, Faculty of SciencesUniversity of GenevaCH‐1211Geneva 4Switzerland
| | - Henrik Johansson
- Institute of Biology/Applied GeneticsDahlem Centre of Plant Sciences (DCPS), Freie Universität BerlinBerlinGermany
| | - Roman Ulm
- Department of Botany and Plant Biology, Section of Biology, Faculty of SciencesUniversity of GenevaCH‐1211Geneva 4Switzerland
- Institute of Genetics and Genomics of Geneva (iGE3)University of GenevaGenevaSwitzerland
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16
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Shi Y, Ke X, Yang X, Liu Y, Hou X. Plants response to light stress. J Genet Genomics 2022; 49:735-747. [DOI: 10.1016/j.jgg.2022.04.017] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/10/2022] [Revised: 04/13/2022] [Accepted: 04/26/2022] [Indexed: 11/30/2022]
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17
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Overexpression of HLH4 Inhibits Cell Elongation and Anthocyanin Biosynthesis in Arabidopsis thaliana. Cells 2022; 11:cells11071087. [PMID: 35406652 PMCID: PMC8997993 DOI: 10.3390/cells11071087] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/22/2022] [Revised: 03/15/2022] [Accepted: 03/22/2022] [Indexed: 12/25/2022] Open
Abstract
In plants, many basic helix-loop-helix (bHLH) transcription factors are involved in controlling cell elongation. Three bHLH proteins, PACLOBTRAZOL RESISTANCE1 (PRE1), Cryptochrome Interacting Basic Helix-loop-helix 5 (CIB5), and Arabidopsis ILI1 binding bHLH1 (IBH1) form a triantagonistic system that antagonistically regulates cell elongation in a competitive manner. In this study, we identified a new player, HLH4, related to IBH1, that negatively regulates cell elongation in Arabidopsis thaliana. Overexpression of HLH4 causes dwarf and dark green phenotypes and results in the downregulation of many key regulatory and enzymatic genes that participate in the anthocyanin biosynthetic pathway. HLH4 interacts with CIB5 and PRE1. By interacting with CIB5, HLH4 interferes with the activity of CIB5, and thus inhibiting the transcription of cell elongation-related genes regulated by CIB5, including EXPANSINS8 and 11 (EXP8 and EXP11) and indole-3-acetic acid 7 and 17 (IAA7 and IAA17). The interference of HLH4 on CIB5 is counteracted by PRE1, in which these bHLH proteins form a new tri-antagonistic system.
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18
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Chen D, Yuan K, Zhang J, Wang Z, Sun Z, Zhang H, Hu J. Response analysis of fluorescence parameters of tomato seedlings oriented to vertical light environment adaptation. PLANT SCIENCE : AN INTERNATIONAL JOURNAL OF EXPERIMENTAL PLANT BIOLOGY 2022; 314:111118. [PMID: 34895547 DOI: 10.1016/j.plantsci.2021.111118] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/27/2021] [Revised: 11/09/2021] [Accepted: 11/14/2021] [Indexed: 06/14/2023]
Abstract
Seedling quality greatly affects the subsequent survival, quality and yield of tomatoes. To explore the response of tomato seedlings on vertical light, we investigated the continuous trends of chlorophyll fluorescence parameters in six vertical light intensities and Pearson's correlation analysis of them. The results showed that the dark fluorescence parameters of Fm, Fv/Fm highly correlated with the photosynthetic photon flux density (PPFD) while NPQ, Y(NPQ), Y(NO) were highly correlated with the day of light processing (DLP). With increasing PPFD, the Fv/Fm decreased, the residual sum of curves increased and the scaling factor (S) was decreased. The photoinhibition phenomenon was relieved to different degrees on DLP 4. L4 (243.17 ± 4.37 μmol m-2 s-1) was the fastest light adaptation, L5 (295.34 ± 5.42 μmol m-2 s-1) was the second. ΦPSII accumulation was greatest in L4 and second in L5. Both L4 and L5 seedling health index and dry weight were significantly higher than L1 (53.20 ± 1.55 μmol m-2 s-1). L4 had the highest Chl a/b and total soluble sugar. It can be concluded that L4 was the best vertical PPFD with the highest light-adaption. The larger the PPFD, the greater the curve deviation, the greater the degree of data discretization, and the higher the photoinhibition. The more appropriate the light intensity is, the faster the seedlings light-adapted are. Therefore, the rapid and proper adjustment of light intensity is the key to obtain high quality tomato seedlings.
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Affiliation(s)
- Danyan Chen
- College of Mechanical and Electronic Engineering, Northwest A&F University, Yangling, Shaanxi, 712100, China; Key Laboratory of Agricultural Internet of Things, Ministry of Agriculture and Rural, Yangling, Shaanxi, 712100, China; Key Laboratory of Information Perception and Intelligent Service, Shaanxi Province, Yangling, Shaanxi, 712100, China.
| | - Kaikai Yuan
- College of Mechanical and Electronic Engineering, Northwest A&F University, Yangling, Shaanxi, 712100, China; Key Laboratory of Agricultural Internet of Things, Ministry of Agriculture and Rural, Yangling, Shaanxi, 712100, China; Key Laboratory of Information Perception and Intelligent Service, Shaanxi Province, Yangling, Shaanxi, 712100, China.
| | - Junhua Zhang
- College of Mechanical and Electronic Engineering, Northwest A&F University, Yangling, Shaanxi, 712100, China; Key Laboratory of Agricultural Internet of Things, Ministry of Agriculture and Rural, Yangling, Shaanxi, 712100, China; Key Laboratory of Information Perception and Intelligent Service, Shaanxi Province, Yangling, Shaanxi, 712100, China.
| | - Zhisheng Wang
- College of Mechanical and Electronic Engineering, Northwest A&F University, Yangling, Shaanxi, 712100, China; Key Laboratory of Agricultural Internet of Things, Ministry of Agriculture and Rural, Yangling, Shaanxi, 712100, China; Key Laboratory of Information Perception and Intelligent Service, Shaanxi Province, Yangling, Shaanxi, 712100, China.
| | - Zhangtong Sun
- College of Mechanical and Electronic Engineering, Northwest A&F University, Yangling, Shaanxi, 712100, China; Key Laboratory of Agricultural Internet of Things, Ministry of Agriculture and Rural, Yangling, Shaanxi, 712100, China; Key Laboratory of Information Perception and Intelligent Service, Shaanxi Province, Yangling, Shaanxi, 712100, China.
| | - Haihui Zhang
- College of Mechanical and Electronic Engineering, Northwest A&F University, Yangling, Shaanxi, 712100, China; Key Laboratory of Agricultural Internet of Things, Ministry of Agriculture and Rural, Yangling, Shaanxi, 712100, China; Key Laboratory of Information Perception and Intelligent Service, Shaanxi Province, Yangling, Shaanxi, 712100, China.
| | - Jin Hu
- College of Mechanical and Electronic Engineering, Northwest A&F University, Yangling, Shaanxi, 712100, China; Key Laboratory of Agricultural Internet of Things, Ministry of Agriculture and Rural, Yangling, Shaanxi, 712100, China; Key Laboratory of Information Perception and Intelligent Service, Shaanxi Province, Yangling, Shaanxi, 712100, China.
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19
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Zeng W, Mostafa S, Lu Z, Jin B. Melatonin-Mediated Abiotic Stress Tolerance in Plants. FRONTIERS IN PLANT SCIENCE 2022; 13:847175. [PMID: 35615125 PMCID: PMC9125191 DOI: 10.3389/fpls.2022.847175] [Citation(s) in RCA: 37] [Impact Index Per Article: 18.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/01/2022] [Accepted: 04/19/2022] [Indexed: 05/07/2023]
Abstract
Melatonin is a multi-functional molecule that is ubiquitous in all living organisms. Melatonin performs essential roles in plant stress tolerance; its application can reduce the harmful effects of abiotic stresses. Plant melatonin biosynthesis, which usually occurs within chloroplasts, and its related metabolic pathways have been extensively characterized. Melatonin regulates plant stress responses by directly inhibiting the accumulation of reactive oxygen and nitrogen species, and by indirectly affecting stress response pathways. In this review, we summarize recent research concerning melatonin biosynthesis, metabolism, and antioxidation; we focus on melatonin-mediated tolerance to abiotic stresses including drought, waterlogging, salt, heat, cold, heavy metal toxicity, light and others. We also examine exogenous melatonin treatment in plants under abiotic stress. Finally, we discuss future perspectives in melatonin research and its applications in plants.
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Affiliation(s)
- Wen Zeng
- College of Horticulture and Plant Protection, Yangzhou University, Yangzhou, China
| | - Salma Mostafa
- College of Horticulture and Plant Protection, Yangzhou University, Yangzhou, China
- Department of Floriculture, Faculty of Agriculture, Alexandria University, Alexandria, Egypt
| | - Zhaogeng Lu
- College of Horticulture and Plant Protection, Yangzhou University, Yangzhou, China
- *Correspondence: Zhaogeng Lu,
| | - Biao Jin
- College of Horticulture and Plant Protection, Yangzhou University, Yangzhou, China
- Biao Jin,
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Tao M, Zhu W, Han H, Liu S, Liu A, Li S, Fu H, Tian J. Mitochondrial proteomic analysis reveals the regulation of energy metabolism and reactive oxygen species production in Clematis terniflora DC. leaves under high-level UV-B radiation followed by dark treatment. J Proteomics 2021; 254:104410. [PMID: 34923174 DOI: 10.1016/j.jprot.2021.104410] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/25/2021] [Revised: 10/08/2021] [Accepted: 10/19/2021] [Indexed: 11/15/2022]
Abstract
Clematis terniflora DC. is an important medicinal plant from the family Ranunculaceae. A previous study has shown that active ingredients in C. terniflora, such as flavonoids and coumarins, are increased under ultraviolet B radiation (UV-B) and dark treatment and that the numbers of genes related to the tricarboxylic acid cycle and mitochondrial electron transport chain (mETC) are changed. To uncover the mechanism of the response to UV-B radiation and dark treatment in C. terniflora, mitochondrial proteomics was performed. The results showed that proteins related to photorespiration, mitochondrial membrane permeability, the tricarboxylic acid cycle, and the mETC mainly showed differential expression profiles. Moreover, the increase in alternative oxidase indicated that another oxygen-consuming respiratory pathway in plant mitochondria was induced to minimize mitochondrial reactive oxygen species production. These results suggested that respiration and mitochondrial membrane permeability were deeply influenced to avoid energy consumption and maintain energy balance under UV-B radiation and dark treatment in C. terniflora leaf mitochondria. Furthermore, oxidative phosphorylation was able to regulate intracellular oxygen balance to resist oxidative stress. This study improves understanding of the function of mitochondria in response to UV-B radiation and dark treatment in C. terniflora. SIGNIFICANCE: C. terniflora was an important traditional Chinese medicine for anti-inflammatory. Previous study showed that the contents of coumarins which were the main active ingredient in C. terniflora were induced by UV-B radiation and dark treatment. In the present study, to uncover the regulatory mechanism of metabolic changes in C. terniflora, mitochondrial proteomics analysis of leaves was performed. The results showed that photorespiration and oxidative phosphorylation pathways were influenced under UV-B radiation and dark treatment. Mitochondria in C. terniflora leaf played a crucial role in energy mechanism and regulation of cellular oxidation-reduction to maintain cell homeostasis under UV-B radiation followed with dark treatment.
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Affiliation(s)
- Minglei Tao
- College of Biomedical Engineering & Instrument Science, Zhejiang University, Hangzhou 310027, China; The Cancer Hospital of the University of Chinese Academy of Sciences (Zhejiang Cancer Hospital), Institute of Basic Medicine and Cancer (IBMC), Chinese Academy of Sciences, Hangzhou 310022, China; College of Life Sciences and Medicine, Zhejiang Sci-Tech University, Hangzhou 310018, China
| | - Wei Zhu
- The Cancer Hospital of the University of Chinese Academy of Sciences (Zhejiang Cancer Hospital), Institute of Basic Medicine and Cancer (IBMC), Chinese Academy of Sciences, Hangzhou 310022, China; Changshu Qiushi Technology Co. Ltd, Suzhou 215500, PR China
| | - Haote Han
- The Cancer Hospital of the University of Chinese Academy of Sciences (Zhejiang Cancer Hospital), Institute of Basic Medicine and Cancer (IBMC), Chinese Academy of Sciences, Hangzhou 310022, China
| | - Shengzhi Liu
- College of Biomedical Engineering & Instrument Science, Zhejiang University, Hangzhou 310027, China
| | - Amin Liu
- College of Biomedical Engineering & Instrument Science, Zhejiang University, Hangzhou 310027, China
| | - Shouxin Li
- The Cancer Hospital of the University of Chinese Academy of Sciences (Zhejiang Cancer Hospital), Institute of Basic Medicine and Cancer (IBMC), Chinese Academy of Sciences, Hangzhou 310022, China
| | - Hongwei Fu
- College of Life Sciences and Medicine, Zhejiang Sci-Tech University, Hangzhou 310018, China.
| | - Jingkui Tian
- College of Biomedical Engineering & Instrument Science, Zhejiang University, Hangzhou 310027, China; The Cancer Hospital of the University of Chinese Academy of Sciences (Zhejiang Cancer Hospital), Institute of Basic Medicine and Cancer (IBMC), Chinese Academy of Sciences, Hangzhou 310022, China.
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21
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Gallé Á, Czékus Z, Tóth L, Galgóczy L, Poór P. Pest and disease management by red light. PLANT, CELL & ENVIRONMENT 2021; 44:3197-3210. [PMID: 34191305 DOI: 10.1111/pce.14142] [Citation(s) in RCA: 16] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/06/2021] [Revised: 06/22/2021] [Accepted: 06/25/2021] [Indexed: 05/22/2023]
Abstract
Light is essential for plant life. It provides a source of energy through photosynthesis and regulates plant growth and development and other cellular processes, such as by controlling the endogenous circadian clock. Light intensity, quality, duration and timing are all important determinants of plant responses, especially to biotic stress. Red light can positively influence plant defence mechanisms against different pathogens, but the molecular mechanism behind this phenomenon is not fully understood. Therefore, we reviewed the impact of red light on plant biotic stress responses against viruses, bacteria, fungi and nematodes, with a focus on the physiological effects of red light treatment and hormonal crosstalk under biotic stress in plants. We found evidence suggesting that exposing plants to red light increases levels of salicylic acid (SA) and induces SA signalling mediating the production of reactive oxygen species, with substantial differences between species and plant organs. Such changes in SA levels could be vital for plants to survive infections. Therefore, the application of red light provides a multidimensional aspect to developing innovative and environmentally friendly approaches to plant and crop disease management.
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Affiliation(s)
- Ágnes Gallé
- Department of Plant Biology, University of Szeged, Szeged, Hungary
| | - Zalán Czékus
- Department of Plant Biology, University of Szeged, Szeged, Hungary
| | - Liliána Tóth
- Department of Biotechnology, University of Szeged, Szeged, Hungary
- Institute of Plant Biology, Biological Research Centre, Eötvös Loránd Research Network, Szeged, Hungary
| | - László Galgóczy
- Department of Biotechnology, University of Szeged, Szeged, Hungary
- Institute of Plant Biology, Biological Research Centre, Eötvös Loránd Research Network, Szeged, Hungary
| | - Péter Poór
- Department of Plant Biology, University of Szeged, Szeged, Hungary
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22
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Czékus Z, Kukri A, Hamow KÁ, Szalai G, Tari I, Ördög A, Poór P. Activation of Local and Systemic Defence Responses by Flg22 Is Dependent on Daytime and Ethylene in Intact Tomato Plants. Int J Mol Sci 2021; 22:ijms22158354. [PMID: 34361121 PMCID: PMC8348740 DOI: 10.3390/ijms22158354] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/17/2021] [Revised: 07/29/2021] [Accepted: 07/31/2021] [Indexed: 02/07/2023] Open
Abstract
The first line of plant defence responses against pathogens can be induced by the bacterial flg22 and can be dependent on various external and internal factors. Here, we firstly studied the effects of daytime and ethylene (ET) using Never ripe (Nr) mutants in the local and systemic defence responses of intact tomato plants after flg22 treatments. Flg22 was applied in the afternoon and at night and rapid reactions were detected. The production of hydrogen peroxide and nitric oxide was induced by flg22 locally, while superoxide was induced systemically, in wild type plants in the light period, but all remained lower at night and in Nr leaves. Flg22 elevated, locally, the ET, jasmonic acid (JA) and salicylic acid (SA) levels in the light period; these levels did not change significantly at night. Expression of Pathogenesis-related 1 (PR1), Ethylene response factor 1 (ERF1) and Defensin (DEF) showed also daytime- and ET-dependent changes. Enhanced ERF1 and DEF expression and stomatal closure were also observable in systemic leaves of wild type plants in the light. These data demonstrate that early biotic signalling in flg22-treated leaves and distal ones is an ET-dependent process and it is also determined by the time of day and inhibited in the early night phase.
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Affiliation(s)
- Zalán Czékus
- Department of Plant Biology, Faculty of Science and Informatics, University of Szeged, 6726 Szeged, Hungary; (Z.C.); (A.K.); (I.T.); (A.Ö.)
- Doctoral School of Biology, University of Szeged, 6726 Szeged, Hungary
| | - András Kukri
- Department of Plant Biology, Faculty of Science and Informatics, University of Szeged, 6726 Szeged, Hungary; (Z.C.); (A.K.); (I.T.); (A.Ö.)
| | - Kamirán Áron Hamow
- Department of Plant Physiology, Agricultural Institute, Centre for Agricultural Research of the Hungarian Academy of Sciences, 2462 Martonvásár, Hungary; (K.Á.H.); (G.S.)
| | - Gabriella Szalai
- Department of Plant Physiology, Agricultural Institute, Centre for Agricultural Research of the Hungarian Academy of Sciences, 2462 Martonvásár, Hungary; (K.Á.H.); (G.S.)
| | - Irma Tari
- Department of Plant Biology, Faculty of Science and Informatics, University of Szeged, 6726 Szeged, Hungary; (Z.C.); (A.K.); (I.T.); (A.Ö.)
| | - Attila Ördög
- Department of Plant Biology, Faculty of Science and Informatics, University of Szeged, 6726 Szeged, Hungary; (Z.C.); (A.K.); (I.T.); (A.Ö.)
| | - Péter Poór
- Department of Plant Biology, Faculty of Science and Informatics, University of Szeged, 6726 Szeged, Hungary; (Z.C.); (A.K.); (I.T.); (A.Ö.)
- Correspondence:
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Synergistic Effects of Melatonin and Gamma-Aminobutyric Acid on Protection of Photosynthesis System in Response to Multiple Abiotic Stressors. Cells 2021; 10:cells10071631. [PMID: 34209882 PMCID: PMC8306587 DOI: 10.3390/cells10071631] [Citation(s) in RCA: 14] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/16/2021] [Revised: 06/22/2021] [Accepted: 06/24/2021] [Indexed: 12/27/2022] Open
Abstract
GABA (gamma-aminobutyric acid) and melatonin are endogenous compounds that enhance plant responses to abiotic stresses. The response of Vicia faba to different stressors (salinity (NaCl), poly ethylene glycol (PEG), and sulfur dioxide (SO2)) was studied after priming with sole application of GABA and melatonin or their co-application (GABA + melatonin). Both melatonin and GABA and their co-application increased leaf area, number of flowers, shoot dry and fresh weight, and total biomass. Plants treated with GABA, melatonin, and GABA + melatonin developed larger stomata with wider aperture compared to the stomata of control plants. The functionality of the photosynthetic system was improved in primed plants. To investigate the photosynthetic functionality in details, the leaf samples of primed plants were exposed to different stressors, including SO2, PEG, and NaCl. The maximum quantum yield of photosystem II (PS II) was higher in the leaf samples of primed plants, while the non-photochemical quenching (NPQ) of primed plants was decreased when leaf samples were exposed to the stressors. Correlation analysis showed the association of initial PIabs with post-stress FV/FM and NPQ. Stressors attenuated the association of initial PIabs with both FV/FM and NPQ, while priming plants with GABA, melatonin, or GABA + melatonin minimized the effect of stressors by attenuating these correlations. In conclusion, priming plants with both GABA and melatonin improved growth and photosynthetic performance of Vicia faba and mitigated the effects of abiotic stressors on the photosynthetic performance.
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Podolec R, Demarsy E, Ulm R. Perception and Signaling of Ultraviolet-B Radiation in Plants. ANNUAL REVIEW OF PLANT BIOLOGY 2021; 72:793-822. [PMID: 33636992 DOI: 10.1146/annurev-arplant-050718-095946] [Citation(s) in RCA: 54] [Impact Index Per Article: 18.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/27/2023]
Abstract
Ultraviolet-B (UV-B) radiation is an intrinsic fraction of sunlight that plants perceive through the UVR8 photoreceptor. UVR8 is a homodimer in its ground state that monomerizes upon UV-B photon absorption via distinct tryptophan residues. Monomeric UVR8 competitively binds to the substrate binding site of COP1, thus inhibiting its E3 ubiquitin ligase activity against target proteins, which include transcriptional regulators such as HY5. The UVR8-COP1 interaction also leads to the destabilization of PIF bHLH factor family members. Additionally, UVR8 directly interacts with and inhibits the DNA binding of a different set of transcription factors. Each of these UVR8 signaling mechanisms initiates nuclear gene expression changes leading to UV-B-induced photomorphogenesis and acclimation. The two WD40-repeat proteins RUP1 and RUP2 provide negative feedback regulation and inactivate UVR8 by facilitating redimerization. Here, we review the molecular mechanisms of the UVR8 pathway from UV-B perception and signal transduction to gene expression changes and physiological UV-B responses.
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Affiliation(s)
- Roman Podolec
- Department of Botany and Plant Biology, Section of Biology, Faculty of Sciences, University of Geneva, 1211 Geneva, Switzerland; , ,
- Institute of Genetics and Genomics of Geneva (iGE3), University of Geneva, 1211 Geneva, Switzerland
| | - Emilie Demarsy
- Department of Botany and Plant Biology, Section of Biology, Faculty of Sciences, University of Geneva, 1211 Geneva, Switzerland; , ,
| | - Roman Ulm
- Department of Botany and Plant Biology, Section of Biology, Faculty of Sciences, University of Geneva, 1211 Geneva, Switzerland; , ,
- Institute of Genetics and Genomics of Geneva (iGE3), University of Geneva, 1211 Geneva, Switzerland
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25
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Zhang S, Yu Z, Qi X, Wang Z, Zheng Y, Ren H, Liang S, Zheng X. Construction of a High-Density Genetic Map and Identification of Leaf Trait-Related QTLs in Chinese Bayberry ( Myrica rubra). FRONTIERS IN PLANT SCIENCE 2021; 12:675855. [PMID: 34194452 PMCID: PMC8238045 DOI: 10.3389/fpls.2021.675855] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 03/04/2021] [Accepted: 05/18/2021] [Indexed: 06/13/2023]
Abstract
Chinese bayberry (Myrica rubra) is an economically important fruit tree that is grown in southern China. Owing to its over 10-year seedling period, the crossbreeding of bayberry is challenging. The characteristics of plant leaves are among the primary factors that control plant architecture and potential yields, making the analysis of leaf trait-related genetic factors crucial to the hybrid breeding of any plant. In the present study, molecular markers associated with leaf traits were identified via a whole-genome re-sequencing approach, and a genetic map was thereby constructed. In total, this effort yielded 902.11 Gb of raw data that led to the identification of 2,242,353 single nucleotide polymorphisms (SNPs) in 140 F1 individuals and parents (Myrica rubra cv. Biqizhong × Myrica rubra cv. 2012LXRM). The final genetic map ultimately incorporated 31,431 SNPs in eight linkage groups, spanning 1,351.85 cM. This map was then used to assemble and update previous scaffold genomic data at the chromosomal level. The genome size of M. rubra was thereby established to be 275.37 Mb, with 94.98% of sequences being assembled into eight pseudo-chromosomes. Additionally, 18 quantitative trait loci (QTLs) associated with nine leaf and growth-related traits were identified. Two QTL clusters were detected (the LG3 and LG5 clusters). Functional annotations further suggested two chlorophyll content-related candidate genes being identified in the LG5 cluster. Overall, this is the first study on the QTL mapping and identification of loci responsible for the regulation of leaf traits in M. rubra, offering an invaluable scientific for future marker-assisted selection breeding and candidate gene analyses.
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Affiliation(s)
| | | | - Xingjiang Qi
- Institute of Horticulture, Zhejiang Academy of Agricultural Sciences, Hangzhou, China
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26
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D'Amico-Damião V, Lúcio JCB, Oliveira R, Gaion LA, Barreto RF, Carvalho RF. Cryptochrome 1a depends on blue light fluence rate to mediate osmotic stress responses in tomato. JOURNAL OF PLANT PHYSIOLOGY 2021; 258-259:153374. [PMID: 33626482 DOI: 10.1016/j.jplph.2021.153374] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/27/2020] [Revised: 12/01/2020] [Accepted: 01/11/2021] [Indexed: 06/12/2023]
Abstract
The participation of plant cryptochromes in water deficit response mechanisms has been highlighted in several reports. However, the role of tomato (Solanum lycopersicum L.) cryptochrome 1a (cry1a) in the blue light fluence-dependent modulation of the water deficit response remains largely elusive. The tomato cry1a mutant and its wild-type counterpart were grown in water (no stress) or PEG6000 (osmotic stress) treatments under white light (60 μmol m-2 s-1) or from low to high blue light fluence (1, 5, 10, 15 and 25 μmol m-2 s-1). We first demonstrate that under nonstress conditions cry1a regulates seedling growth by mechanisms that involve pigmentation, lipid peroxidation and osmoprotectant accumulation in a blue light-dependent manner. In addition, we further highlighted under osmotic stress conditions that cry1a increased tomato growth by reduced malondialdehyde (MDA) and proline accumulation. Although blue light is an environmental signal that influences osmotic stress responses mediated by tomato cry1a, specific blue light fluence rates are required during these responses. Here, we show that CRY1a manipulation may be a potential biotechnological target to develop a drought-tolerant tomato variety. Nevertheless, the complete understanding of this phenomenon requires further investigation.
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Affiliation(s)
- Victor D'Amico-Damião
- Department of Biology Applied to Agriculture, São Paulo State University (UNESP), 14884-900, Jaboticabal, Brazil
| | - José Clebson Barbosa Lúcio
- Department of Biology Applied to Agriculture, São Paulo State University (UNESP), 14884-900, Jaboticabal, Brazil
| | - Reginaldo Oliveira
- Department of Biology Applied to Agriculture, São Paulo State University (UNESP), 14884-900, Jaboticabal, Brazil
| | | | | | - Rogério Falleiros Carvalho
- Department of Biology Applied to Agriculture, São Paulo State University (UNESP), 14884-900, Jaboticabal, Brazil.
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A constitutively monomeric UVR8 photoreceptor confers enhanced UV-B photomorphogenesis. Proc Natl Acad Sci U S A 2021; 118:2017284118. [PMID: 33542100 PMCID: PMC8017708 DOI: 10.1073/pnas.2017284118] [Citation(s) in RCA: 13] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/01/2022] Open
Abstract
Coping with UV-B is crucial for plant survival in sunlight. The UV-B photoreceptor UVR8 regulates gene expression associated with photomorphogenesis, acclimation, and UV-B stress tolerance. UV-B photon reception by UVR8 homodimers results in monomerization, followed by interaction with the key signaling protein COP1. We have discovered a UV-B hypersensitive UVR8 photoreceptor that confers strongly enhanced UV-B tolerance and generated a UVR8 variant based on the underlying mutation that shows extremely enhanced constitutive signaling activity. Our findings provide key mechanistic insight into how plants respond and acclimate to UV-B radiation. The plant ultraviolet-B (UV-B) photoreceptor UVR8 plays an important role in UV-B acclimation and survival. UV-B absorption by homodimeric UVR8 induces its monomerization and interaction with the E3 ubiquitin ligase COP1, leading ultimately to gene expression changes. UVR8 is inactivated through redimerization, facilitated by RUP1 and RUP2. Here, we describe a semidominant, hyperactive allele, namely uvr8-17D, that harbors a glycine-101 to serine mutation. UVR8G101S overexpression led to weak constitutive photomorphogenesis and extreme UV-B responsiveness. UVR8G101S was observed to be predominantly monomeric in vivo and, once activated by UV-B, was not efficiently inactivated. Analysis of a UVR8 crystal structure containing the G101S mutation revealed the distortion of a loop region normally involved in stabilization of the UVR8 homodimer. Plants expressing a UVR8 variant combining G101S with the previously described W285A mutation exhibited robust constitutive photomorphogenesis. This work provides further insight into UVR8 activation and inactivation mechanisms and describes a genetic tool for the manipulation of photomorphogenic responses.
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28
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Wobbe L. The Molecular Function of Plant mTERFs as Key Regulators of Organellar Gene Expression. PLANT & CELL PHYSIOLOGY 2021; 61:2004-2017. [PMID: 33067620 DOI: 10.1093/pcp/pcaa132] [Citation(s) in RCA: 12] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/20/2020] [Accepted: 09/25/2020] [Indexed: 05/27/2023]
Abstract
The protein family of mTERFs (mitochondrial transcription termination factors) was initially studied in mammalian and insect mitochondria before the first Arabidopsis mTERF mutant was characterized. More than 10 years of research on the function of plant mTERFs in the flowering plants Arabidopsis thaliana, Zea mays and the green microalga Chlamydomonas reinhardtii has since highlighted that mTERFs are key regulators of organellar gene expression (OGE) in mitochondria and in chloroplasts. Additional functions to be fulfilled by plant mTERFs (e.g. splicing) and the fact that the expression of two organellar genomes had to be facilitated have led to a massive expansion of the plant mTERF portfolio compared to that found in mammals. Plant mTERFs are implicated in all steps of OGE ranging from the modulation of transcription to the maturation of tRNAs and hence translation. Furthermore, being regulators of OGE, mTERFs are required for a successful long-term acclimation to abiotic stress, retrograde signaling and interorganellar communication. Here, I review the recent progress in the elucidation of molecular mTERF functions.
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Affiliation(s)
- Lutz Wobbe
- Algae Biotechnology & Bioenergy Group, Faculty of Biology, Center for Biotechnology (CeBiTec), Bielefeld University, Universit�tsstrasse 27, Bielefeld 33615, Germany
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29
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Rusaczonek A, Czarnocka W, Willems P, Sujkowska-Rybkowska M, Van Breusegem F, Karpiński S. Phototropin 1 and 2 Influence Photosynthesis, UV-C Induced Photooxidative Stress Responses, and Cell Death. Cells 2021; 10:cells10020200. [PMID: 33498294 PMCID: PMC7909289 DOI: 10.3390/cells10020200] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/30/2020] [Revised: 01/10/2021] [Accepted: 01/16/2021] [Indexed: 12/26/2022] Open
Abstract
Phototropins are plasma membrane-associated photoreceptors of blue light and UV-A/B radiation. The Arabidopsis thaliana genome encodes two phototropins, PHOT1 and PHOT2, that mediate phototropism, chloroplast positioning, and stomatal opening. They are well characterized in terms of photomorphogenetic processes, but so far, little was known about their involvement in photosynthesis, oxidative stress responses, and cell death. By analyzing phot1, phot2 single, and phot1phot2 double mutants, we demonstrated that both phototropins influence the photochemical and non-photochemical reactions, photosynthetic pigments composition, stomata conductance, and water-use efficiency. After oxidative stress caused by UV-C treatment, phot1 and phot2 single and double mutants showed a significantly reduced accumulation of H2O2 and more efficient photosynthetic electron transport compared to the wild type. However, all phot mutants exhibited higher levels of cell death four days after UV-C treatment, as well as deregulated gene expression. Taken together, our results reveal that on the one hand, both phot1 and phot2 contribute to the inhibition of UV-C-induced foliar cell death, but on the other hand, they also contribute to the maintenance of foliar H2O2 levels and optimal intensity of photochemical reactions and non-photochemical quenching after an exposure to UV-C stress. Our data indicate a novel role for phototropins in the condition-dependent optimization of photosynthesis, growth, and water-use efficiency as well as oxidative stress and cell death response after UV-C exposure.
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Affiliation(s)
- Anna Rusaczonek
- Department of Botany, Institute of Biology, Warsaw University of Life Sciences, Nowoursynowska 159, 02-776 Warsaw, Poland; (W.C.); (M.S.-R.)
- Department of Plant Genetics, Breeding and Biotechnology, Institute of Biology, Warsaw University of Life Sciences, Nowoursynowska 159, 02-776 Warsaw, Poland
- Correspondence: (A.R.); (S.K.)
| | - Weronika Czarnocka
- Department of Botany, Institute of Biology, Warsaw University of Life Sciences, Nowoursynowska 159, 02-776 Warsaw, Poland; (W.C.); (M.S.-R.)
- Department of Plant Genetics, Breeding and Biotechnology, Institute of Biology, Warsaw University of Life Sciences, Nowoursynowska 159, 02-776 Warsaw, Poland
| | - Patrick Willems
- Department of Plant Biotechnology and Bioinformatics, Ghent University, Technologiepark 71, 9052 Ghent, Belgium; (P.W.); (F.V.B.)
- VIB Center of Plant Systems Biology, Technologiepark 71, 9052 Ghent, Belgium
| | - Marzena Sujkowska-Rybkowska
- Department of Botany, Institute of Biology, Warsaw University of Life Sciences, Nowoursynowska 159, 02-776 Warsaw, Poland; (W.C.); (M.S.-R.)
| | - Frank Van Breusegem
- Department of Plant Biotechnology and Bioinformatics, Ghent University, Technologiepark 71, 9052 Ghent, Belgium; (P.W.); (F.V.B.)
- VIB Center of Plant Systems Biology, Technologiepark 71, 9052 Ghent, Belgium
| | - Stanisław Karpiński
- Department of Plant Genetics, Breeding and Biotechnology, Institute of Biology, Warsaw University of Life Sciences, Nowoursynowska 159, 02-776 Warsaw, Poland
- Correspondence: (A.R.); (S.K.)
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Hasanuzzaman M, Bhuyan MHMB, Parvin K, Bhuiyan TF, Anee TI, Nahar K, Hossen MS, Zulfiqar F, Alam MM, Fujita M. Regulation of ROS Metabolism in Plants under Environmental Stress: A Review of Recent Experimental Evidence. Int J Mol Sci 2020; 21:ijms21228695. [PMID: 33218014 PMCID: PMC7698618 DOI: 10.3390/ijms21228695] [Citation(s) in RCA: 138] [Impact Index Per Article: 34.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/01/2020] [Revised: 11/14/2020] [Accepted: 11/17/2020] [Indexed: 12/18/2022] Open
Abstract
Various environmental stresses singly or in combination generate excess amounts of reactive oxygen species (ROS), leading to oxidative stress and impaired redox homeostasis. Generation of ROS is the obvious outcome of abiotic stresses and is gaining importance not only for their ubiquitous generation and subsequent damaging effects in plants but also for their diversified roles in signaling cascade, affecting other biomolecules, hormones concerning growth, development, or regulation of stress tolerance. Therefore, a good balance between ROS generation and the antioxidant defense system protects photosynthetic machinery, maintains membrane integrity, and prevents damage to nucleic acids and proteins. Notably, the antioxidant defense system not only scavenges ROS but also regulates the ROS titer for signaling. A glut of studies have been executed over the last few decades to discover the pattern of ROS generation and ROS scavenging. Reports suggested a sharp threshold level of ROS for being beneficial or toxic, depending on the plant species, their growth stages, types of abiotic stresses, stress intensity, and duration. Approaches towards enhancing the antioxidant defense in plants is one of the vital areas of research for plant biologists. Therefore, in this review, we accumulated and discussed the physicochemical basis of ROS production, cellular compartment-specific ROS generation pathways, and their possible distressing effects. Moreover, the function of the antioxidant defense system for detoxification and homeostasis of ROS for maximizing defense is also discussed in light of the latest research endeavors and experimental evidence.
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Affiliation(s)
- Mirza Hasanuzzaman
- Department of Agronomy, Faculty of Agriculture, Sher-e-Bangla Agricultural University, Sher-e-Bangla Nagar, Dhaka 1207, Bangladesh; (T.I.A.); (M.M.A.)
- Correspondence: (M.H.); (M.F.)
| | | | - Khursheda Parvin
- Laboratory of Plant Stress Responses, Faculty of Agriculture, Kagawa University, Miki-cho, Kita-Gun, Kagawa 761-0795, Japan;
- Department of Horticulture, Faculty of Agriculture, Sher-e-Bangla Agricultural University, Sher-e-Bangla Nagar, Dhaka 1207, Bangladesh
| | - Tasnim Farha Bhuiyan
- Department of Agricultural Botany, Faculty of Agriculture, Sher-e-Bangla Agricultural University, Sher-e-Bangla Nagar, Dhaka 1207, Bangladesh; (T.F.B.); (K.N.)
| | - Taufika Islam Anee
- Department of Agronomy, Faculty of Agriculture, Sher-e-Bangla Agricultural University, Sher-e-Bangla Nagar, Dhaka 1207, Bangladesh; (T.I.A.); (M.M.A.)
| | - Kamrun Nahar
- Department of Agricultural Botany, Faculty of Agriculture, Sher-e-Bangla Agricultural University, Sher-e-Bangla Nagar, Dhaka 1207, Bangladesh; (T.F.B.); (K.N.)
| | | | - Faisal Zulfiqar
- Institute of Horticultural Sciences, Faculty of Agriculture, University of Agriculture, Faisalabad 38000, Pakistan;
| | - Md. Mahabub Alam
- Department of Agronomy, Faculty of Agriculture, Sher-e-Bangla Agricultural University, Sher-e-Bangla Nagar, Dhaka 1207, Bangladesh; (T.I.A.); (M.M.A.)
| | - Masayuki Fujita
- Laboratory of Plant Stress Responses, Faculty of Agriculture, Kagawa University, Miki-cho, Kita-Gun, Kagawa 761-0795, Japan;
- Correspondence: (M.H.); (M.F.)
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31
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Babla MH, Tissue DT, Cazzonelli CI, Chen ZH. Effect of high light on canopy-level photosynthesis and leaf mesophyll ion flux in tomato. PLANTA 2020; 252:80. [PMID: 33037481 DOI: 10.1007/s00425-020-03493-0] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/27/2020] [Accepted: 10/05/2020] [Indexed: 06/11/2023]
Abstract
This study highlights the potential link between high light-induced canopy-level photosynthesis and mesophyll cell K+, Cl-, Ca2+, and H+ homeostasis in tomato. Light is a primary energy source for photosynthesis and a vital regulator of mineral nutrient uptake and distribution in plants. Plants need to optimize photosynthesis and nutrient balance in leaves for performance in fluctuating light conditions that are partially regulated by light-induced ion homeostatsis in the mesophyll cells. It is still elusive whether high light-induced leaf mesophyll ion fluxes affect leaf photosynthesis at different canopy levels in Solanum lycopersicum L. Leaf gas exchange and microelectrode ion flux (MIFE) measurements were employed to study the effects of prolonged light-induced canopy-level leaf physiological responses of tomato plants. High light resulted in a significant lowering in photosynthesis in the fully-exposed top canopy leaves of tomato, but not to mid- or low-canopy leaves. Leaf mesophyll K+ effluxes of all canopies were significantly decreased after three weeks of high light treatment. However, high light-induced leaf mesophyll Ca2+ effluxes were significantly enhanced only in the top and mid canopies. Moreover, we found that photosynthetic parameters were significantly correlated with leaf mesophyll ion fluxes. We thus propose that canopy-level significant Ca2+ efflux and K+ efflux of leaf mesophyll may serve as early indicators for light-induced regulation on photosynthesis. We conclude that light-induced differential photosynthetic performance and ion fluxes in leaves may implicate a requirement of more uniform light irradiance and spectra at different canopy levels of tall greenhouse tomato plants. This can be achieved through new innovative greenhouse lighting technologies and covering materials towards the enhancement of crop photosynthesis and yield.
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Affiliation(s)
| | - David Thomas Tissue
- Hawkesbury Institute for the Environment, Western Sydney University, Penrith, NSW, 2751, Australia
| | | | - Zhong-Hua Chen
- School of Science, Western Sydney University, Penrith, NSW, 2751, Australia.
- Hawkesbury Institute for the Environment, Western Sydney University, Penrith, NSW, 2751, Australia.
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32
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McAusland L, Lim MT, Morris DE, Smith-Herman HL, Mohammed U, Hayes-Gill BR, Crowe JA, Fisk ID, Murchie EH. Growth Spectrum Complexity Dictates Aromatic Intensity in Coriander ( Coriandrum sativum L.). FRONTIERS IN PLANT SCIENCE 2020; 11:462. [PMID: 32499791 PMCID: PMC7242725 DOI: 10.3389/fpls.2020.00462] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/18/2019] [Accepted: 03/27/2020] [Indexed: 06/11/2023]
Abstract
Advancements in availability and specificity of light-emitting diodes (LEDs) have facilitated trait modification of high-value edible herbs and vegetables through the fine manipulation of spectra. Coriander (Coriandrum sativum L.) is a culinary herb, known for its fresh, citrusy aroma, and high economic value. Studies into the impact of light intensity and spectrum on C. sativum physiology, morphology, and aroma are limited. Using a nasal impact frequency panel, a selection of key compounds associated with the characteristic aroma of coriander was identified. Significant differences (P < 0.05) were observed in the concentration of these aromatics between plants grown in a controlled environment chamber under the same photosynthetic photon flux density (PPFD) but custom spectra: red (100%), blue (100%), red + blue (RB, 50% equal contribution), or red + green + blue (RGB, 35.8% red: 26.4% green: 37.8% blue) wavelengths. In general, the concentration of aromatics increased with increasing numbers of wavelengths emitted alongside selective changes, e.g., the greatest increase in coriander-defining E-(2)-decenal occurred under the RGB spectrum. This change in aroma profile was accompanied by significant differences (P < 0.05) in light saturated photosynthetic CO2 assimilation, water-use efficiency (Wi), and morphology. While plants grown under red wavelengths achieved the greatest leaf area, RB spectrum plants were shortest and had the highest leaf:shoot ratio. Therefore, this work evidences a trade-off between sellable commercial morphologies with a weaker, less desirable aroma or a less desirable morphology with more intense coriander-like aromas. When supplemental trichromatic LEDs were used in a commercial glasshouse, the majority of compounds, with the exception of linalool, also increased showing that even as a supplement additional wavelength can modify the aromatic profile increasing its complexity. Lower levels of linalool suggest these plants may be more susceptible to biotic stress such as herbivory. Finally, the concentration of coriander-defining aromatics E-(2)-decenal and E-(2)-hexenal was significantly higher in supermarket pre-packaged coriander leaves implying that concentrations of aromatics increase after excision. In summary, spectra can be used to co-manipulate aroma profile and plant form with increasing spectral complexity leading to greater aromatic complexity and intensity. We suggest that increasing spectral complexity progressively stimulates signaling pathways giving rise to valuable economic traits.
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Affiliation(s)
- Lorna McAusland
- Division of Plant and Crop Sciences, School of Biosciences, University of Nottingham, Nottingham, United Kingdom
| | - Mui-Ting Lim
- Division of Food Sciences, School of Biosciences, University of Nottingham, Nottingham, United Kingdom
| | - David E. Morris
- Bioengineering Research Group, Faculty of Engineering, University of Nottingham, Nottingham, United Kingdom
| | - Hayley L. Smith-Herman
- Division of Plant and Crop Sciences, School of Biosciences, University of Nottingham, Nottingham, United Kingdom
| | - Umar Mohammed
- Division of Plant and Crop Sciences, School of Biosciences, University of Nottingham, Nottingham, United Kingdom
| | - Barrie R. Hayes-Gill
- Optics and Photonics Group, Faculty of Engineering, University of Nottingham, Nottingham, United Kingdom
| | - John A. Crowe
- Bioengineering Research Group, Faculty of Engineering, University of Nottingham, Nottingham, United Kingdom
| | - Ian D. Fisk
- Division of Food Sciences, School of Biosciences, University of Nottingham, Nottingham, United Kingdom
| | - Erik H. Murchie
- Division of Plant and Crop Sciences, School of Biosciences, University of Nottingham, Nottingham, United Kingdom
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Monteagudo A, Kiss T, Mayer M, Casas AM, Igartua E, Karsai I. Genetic diversity in developmental responses to light spectral quality in barley (Hordeum vulgare L.). BMC PLANT BIOLOGY 2020; 20:207. [PMID: 32397955 PMCID: PMC7216675 DOI: 10.1186/s12870-020-02416-1] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/19/2019] [Accepted: 04/29/2020] [Indexed: 06/06/2023]
Abstract
BACKGROUND Plants use light wavelength, intensity, direction and duration to predict imminent seasonal changes and to determine when to initiate physiological and developmental processes. Among them, crop responses to light are not fully understood. Here, we study how light quality affects barley development, using two broad-spectrum light sources, metal halide (M) and fluorescent (F) lamps. Eleven varieties with known allelic variants for the major flowering time genes were evaluated under controlled conditions (long days, same light intensity). Two experiments were carried out with fully-vernalized plants: 1) control treatments (M, F); 2) shifting chambers 10 days after the start of the experiment (MF, FM). RESULTS In general, varieties developed faster under longer exposure to M conditions. The greatest differences were due to a delay promoted by F light bulbs, especially in the time to first node appearance and until the onset of stem elongation. Yield related-traits as the number of seeds were also affected by the conditions experienced. However, not each variety responded equally, and they could be classified in insensitive and sensitive to light quality. Expression levels of flowering time genes HvVRN1, HvFT1 and PPD-H1 were high in M, while HvFT3 and HvVRN2 were higher under F conditions. The expression under shift treatments revealed also a high correlation between HvVRN1 and PPD-H1 transcript levels. CONCLUSIONS The characterization of light quality effects has highlighted the important influence of the spectrum on early developmental stages, affecting the moment of onset of stem elongation, and further consequences on the morphology of the plant and yield components. We suggest that light spectra control the vernalization and photoperiod genes probably through the regulation of upstream elements of signalling pathways. The players behind the different responses to light spectra found deserve further research, which could help to optimize breeding strategies.
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Affiliation(s)
- Arantxa Monteagudo
- Aula Dei Experimental Station (EEAD-CSIC), Avda. Montañana 1005, E-50059 Zaragoza, Spain
| | - Tibor Kiss
- Centre for Agriculture Research (ATK), Martonvásár, H-2462 Hungary
| | - Marianna Mayer
- Centre for Agriculture Research (ATK), Martonvásár, H-2462 Hungary
| | - Ana M. Casas
- Aula Dei Experimental Station (EEAD-CSIC), Avda. Montañana 1005, E-50059 Zaragoza, Spain
| | - Ernesto Igartua
- Aula Dei Experimental Station (EEAD-CSIC), Avda. Montañana 1005, E-50059 Zaragoza, Spain
| | - Ildikó Karsai
- Centre for Agriculture Research (ATK), Martonvásár, H-2462 Hungary
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Tavridou E, Schmid-Siegert E, Fankhauser C, Ulm R. UVR8-mediated inhibition of shade avoidance involves HFR1 stabilization in Arabidopsis. PLoS Genet 2020; 16:e1008797. [PMID: 32392219 PMCID: PMC7241853 DOI: 10.1371/journal.pgen.1008797] [Citation(s) in RCA: 20] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/07/2020] [Revised: 05/21/2020] [Accepted: 04/26/2020] [Indexed: 11/19/2022] Open
Abstract
Sun-loving plants perceive the proximity of potential light-competing neighboring plants as a reduction in the red:far-red ratio (R:FR), which elicits a suite of responses called the "shade avoidance syndrome" (SAS). Changes in R:FR are primarily perceived by phytochrome B (phyB), whereas UV-B perceived by UV RESISTANCE LOCUS 8 (UVR8) elicits opposing responses to provide a counterbalance to SAS, including reduced shade-induced hypocotyl and petiole elongation. Here we show at the genome-wide level that UVR8 broadly suppresses shade-induced gene expression. A subset of this gene regulation is dependent on the UVR8-stabilized atypical bHLH transcription regulator LONG HYPOCOTYL IN FAR-RED 1 (HFR1), which functions in part redundantly with PHYTOCHROME INTERACTING FACTOR 3-LIKE 1 (PIL1). In parallel, UVR8 signaling decreases protein levels of the key positive regulators of SAS, namely the bHLH transcription factors PHYTOCHROME INTERACTING FACTOR 4 (PIF4) and PIF5, in a COP1-dependent but HFR1-independent manner. We propose that UV-B antagonizes SAS via two mechanisms: degradation of PIF4 and PIF5, and HFR1- and PIL1-mediated inhibition of PIF4 and PIF5 function. This work highlights the importance of typical and atypical bHLH transcription regulators for the integration of light signals from different photoreceptors and provides further mechanistic insight into the crosstalk of UVR8 signaling and SAS.
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Affiliation(s)
- Eleni Tavridou
- Department of Botany and Plant Biology, Section of Biology, Faculty of Science, University of Geneva, CH, Geneva, Switzerland
- Institute of Genetics and Genomics of Geneva (iGE3), University of Geneva, Geneva, Switzerland
| | - Emanuel Schmid-Siegert
- SIB-Swiss Institute of Bioinformatics, University of Lausanne, CH, Lausanne, Switzerland
| | - Christian Fankhauser
- Center for Integrative Genomics, Faculty of Biology and Medicine, University of Lausanne, CH, Lausanne, Switzerland
| | - Roman Ulm
- Department of Botany and Plant Biology, Section of Biology, Faculty of Science, University of Geneva, CH, Geneva, Switzerland
- Institute of Genetics and Genomics of Geneva (iGE3), University of Geneva, Geneva, Switzerland
- * E-mail:
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Cryptochrome-mediated blue-light signalling modulates UVR8 photoreceptor activity and contributes to UV-B tolerance in Arabidopsis. Nat Commun 2020; 11:1323. [PMID: 32165634 PMCID: PMC7067804 DOI: 10.1038/s41467-020-15133-y] [Citation(s) in RCA: 38] [Impact Index Per Article: 9.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/04/2019] [Accepted: 02/18/2020] [Indexed: 12/16/2022] Open
Abstract
UV-B constitutes a critical part of the sunlight reaching the earth surface. The homodimeric plant UV-B photoreceptor UV RESISTANCE LOCUS 8 (UVR8) monomerizes in response to UV-B and induces photomorphogenic responses, including UV-B acclimation and tolerance. REPRESSOR OF UV-B PHOTOMORPHOGENESIS 1 (RUP1) and RUP2 are negative feedback regulators that operate by facilitating UVR8 ground state reversion through re-dimerization. Here we show that RUP1 and RUP2 are transcriptionally induced by cryptochrome photoreceptors in response to blue light, which is dependent on the bZIP transcriptional regulator ELONGATED HYPOCOTYL 5 (HY5). Elevated RUP1 and RUP2 levels under blue light enhance UVR8 re-dimerization, thereby negatively regulating UVR8 signalling and providing photoreceptor pathway cross-regulation in a polychromatic light environment, as is the case in nature. We further show that cryptochrome 1, as well as the red-light photoreceptor phytochrome B, contribute to UV-B tolerance redundantly with UVR8. Thus, photoreceptors for both visible light and UV-B regulate UV-B tolerance through an intricate interplay allowing the integration of diverse sunlight signals. The Arabidopsis UVR8 photoreceptor is a dimer that monomerizes in response to UV-B. Here the authors show that cryptochromes contribute to UV tolerance and facilitate UVR8 redimerization via induction of RUP proteins in response to blue light, modifying UV-B signalling in polychromatic light environments.
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36
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Davies KM, Jibran R, Zhou Y, Albert NW, Brummell DA, Jordan BR, Bowman JL, Schwinn KE. The Evolution of Flavonoid Biosynthesis: A Bryophyte Perspective. FRONTIERS IN PLANT SCIENCE 2020; 11:7. [PMID: 32117358 PMCID: PMC7010833 DOI: 10.3389/fpls.2020.00007] [Citation(s) in RCA: 92] [Impact Index Per Article: 23.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/29/2019] [Accepted: 01/07/2020] [Indexed: 05/04/2023]
Abstract
The flavonoid pathway is one of the best characterized specialized metabolite pathways of plants. In angiosperms, the flavonoids have varied roles in assisting with tolerance to abiotic stress and are also key for signaling to pollinators and seed dispersal agents. The pathway is thought to be specific to land plants and to have arisen during the period of land colonization around 550-470 million years ago. In this review we consider current knowledge of the flavonoid pathway in the bryophytes, consisting of the liverworts, hornworts, and mosses. The pathway is less characterized for bryophytes than angiosperms, and the first genetic and molecular studies on bryophytes are finding both commonalities and significant differences in flavonoid biosynthesis and pathway regulation between angiosperms and bryophytes. This includes biosynthetic pathway branches specific to each plant group and the apparent complete absence of flavonoids from the hornworts.
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Affiliation(s)
- Kevin M. Davies
- The New Zealand Institute for Plant and Food Research Limited, Palmerston North, New Zealand
| | - Rubina Jibran
- The New Zealand Institute for Plant and Food Research Limited, Palmerston North, New Zealand
| | - Yanfei Zhou
- The New Zealand Institute for Plant and Food Research Limited, Palmerston North, New Zealand
| | - Nick W. Albert
- The New Zealand Institute for Plant and Food Research Limited, Palmerston North, New Zealand
| | - David A. Brummell
- The New Zealand Institute for Plant and Food Research Limited, Palmerston North, New Zealand
| | - Brian R. Jordan
- Faculty of Agriculture and Life Sciences, Lincoln University, Christchurch, New Zealand
| | - John L. Bowman
- School of Biological Sciences, Monash University, Melbourne, VIC, Australia
| | - Kathy E. Schwinn
- The New Zealand Institute for Plant and Food Research Limited, Palmerston North, New Zealand
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37
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Tavridou E, Pireyre M, Ulm R. Degradation of the transcription factors PIF4 and PIF5 under UV-B promotes UVR8-mediated inhibition of hypocotyl growth in Arabidopsis. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2020; 101:507-517. [PMID: 31571300 PMCID: PMC7027837 DOI: 10.1111/tpj.14556] [Citation(s) in RCA: 50] [Impact Index Per Article: 12.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/02/2019] [Revised: 09/17/2019] [Accepted: 09/23/2019] [Indexed: 05/03/2023]
Abstract
Inhibition of hypocotyl growth is a well-established UV-B-induced photomorphogenic response that is mediated by the UV-B photoreceptor UV RESISTANCE LOCUS 8 (UVR8). However, the molecular mechanism by which UVR8 signaling triggers inhibition of hypocotyl growth is poorly understood. The bZIP protein ELONGATED HYPOCOTYL 5 (HY5) functions as the main positive regulatory transcription factor in the UVR8 signaling pathway, with HY5-HOMOLOG (HYH) playing a minor role. However, here we demonstrate that hy5 hyh double mutants maintain significant UVR8-dependent hypocotyl growth inhibition. We identify UVR8-dependent inhibition of the activities of bHLH transcription factors PHYTOCHROME INTERACTING FACTOR 4 (PIF4) and PIF5 as part of the UVR8 signaling pathway, which results in inhibition of hypocotyl growth. The UVR8-mediated repression of several hypocotyl elongation-related genes is independent of HY5 and HYH but largely associated with UVR8-dependent degradation of PIF4 and PIF5, a process that consequently diminishes PIF4/5 target promoter occupancy. Taken together, our data indicate that UVR8-mediated inhibition of hypocotyl growth involves degradation of PIF4 and PIF5. These findings contribute to our mechanistic understanding of UVR8-induced photomorphogenesis and further support the function of PIFs as integrators of different photoreceptor signaling pathways.
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Affiliation(s)
- Eleni Tavridou
- Department of Botany and Plant BiologySection of BiologyFaculty of ScienceUniversity of GenevaCH‐1211Geneva 4Switzerland
| | - Marie Pireyre
- Department of Botany and Plant BiologySection of BiologyFaculty of ScienceUniversity of GenevaCH‐1211Geneva 4Switzerland
| | - Roman Ulm
- Department of Botany and Plant BiologySection of BiologyFaculty of ScienceUniversity of GenevaCH‐1211Geneva 4Switzerland
- Institute of Genetics and Genomics of Geneva (iGE3)University of GenevaCH-1211Geneva 4Switzerland
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Czarnocka W, Rusaczonek A, Willems P, Sujkowska-Rybkowska M, Van Breusegem F, Karpiński S. Novel Role of JAC1 in Influencing Photosynthesis, Stomatal Conductance, and Photooxidative Stress Signalling Pathway in Arabidopsis thaliana. FRONTIERS IN PLANT SCIENCE 2020; 11:1124. [PMID: 32849690 PMCID: PMC7403226 DOI: 10.3389/fpls.2020.01124] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/22/2020] [Accepted: 07/08/2020] [Indexed: 05/03/2023]
Abstract
Regulation of light absorption under variable light conditions is essential to optimize photosynthetic and acclimatory processes in plants. Light energy absorbed in excess has a damaging effect on chloroplasts and can lead to cell death. Therefore, plants have evolved protective mechanisms against excess excitation energy that include chloroplast accumulation and avoidance responses. One of the proteins involved in facilitating chloroplast movements in Arabidopsis thaliana is the J domain-containing protein required for chloroplast accumulation response 1 (JAC1). The function of JAC1 relates to the chloroplast actin filaments appearance and disappearance. So far, the role of JAC1 was studied mainly in terms of chloroplasts photorelocation. Here, we demonstrate that the function of JAC1 is more complex, since it influences the composition of photosynthetic pigments, the efficiency of photosynthesis, and the CO2 uptake rate. JAC1 has positive effect on water use efficiency (WUE) by reducing stomatal aperture and water vapor conductance. Importantly, we show that the stomatal aperture regulation is genetically coupled with JAC1 activity. In addition, our data demonstrate that JAC1 is involved in the fine-tuning of H2O2 foliar levels, antioxidant enzymes activities and cell death after UV-C photooxidative stress. This work uncovers a novel function for JAC1 in affecting photosynthesis, CO2 uptake, and photooxidative stress responses.
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Affiliation(s)
- Weronika Czarnocka
- Department of Botany, Institute of Biology, Warsaw University of Life Sciences, Warsaw, Poland
- Department of Plant Genetics, Breeding and Biotechnology, Institute of Biology, Warsaw University of Life Sciences, Warsaw, Poland
- *Correspondence: Weronika Czarnocka,
| | - Anna Rusaczonek
- Department of Botany, Institute of Biology, Warsaw University of Life Sciences, Warsaw, Poland
- Department of Plant Genetics, Breeding and Biotechnology, Institute of Biology, Warsaw University of Life Sciences, Warsaw, Poland
| | - Patrick Willems
- Department of Plant Biotechnology and Bioinformatics, Ghent University, Ghent, Belgium
- Center of Plant Systems Biology, VIB, Ghent, Belgium
| | | | - Frank Van Breusegem
- Department of Plant Biotechnology and Bioinformatics, Ghent University, Ghent, Belgium
- Center of Plant Systems Biology, VIB, Ghent, Belgium
| | - Stanisław Karpiński
- Department of Plant Genetics, Breeding and Biotechnology, Institute of Biology, Warsaw University of Life Sciences, Warsaw, Poland
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Sun T, Li L. Toward the 'golden' era: The status in uncovering the regulatory control of carotenoid accumulation in plants. PLANT SCIENCE : AN INTERNATIONAL JOURNAL OF EXPERIMENTAL PLANT BIOLOGY 2020; 290:110331. [PMID: 31779888 DOI: 10.1016/j.plantsci.2019.110331] [Citation(s) in RCA: 56] [Impact Index Per Article: 14.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/20/2019] [Revised: 10/21/2019] [Accepted: 11/01/2019] [Indexed: 05/17/2023]
Abstract
Carotenoids are essential pigments to plants and important natural products to humans. Carotenoids as both primary and specialized metabolites fulfill multifaceted functions in plants. As such, carotenoid accumulation (a net process of biosynthesis, degradation and sequestration) is subjected to complicated regulation throughout plant life cycle in response to developmental and environmental signals. Investigation of transcriptional regulation of carotenoid metabolic genes remains the focus in understanding the regulatory control of carotenoid accumulation. While discovery of bona fide carotenoid metabolic regulators is still challenging, the recent progress of identification of various transcription factors and regulators helps us to construct hierarchical regulatory network of carotenoid accumulation. The elucidation of carotenoid regulatory mechanisms at protein level and in chromoplast provides some insights into post-translational regulation of carotenogenic enzymes and carotenoid sequestration in plastid sink. This review briefly describes the pathways and main flux-controlling steps for carotenoid accumulation in plants. It highlights our recent understanding of the regulatory mechanisms underlying carotenoid accumulation at both transcriptional and post-translational levels. It also discusses the opportunities to expand toolbox for further shedding light upon the intrinsic regulation of carotenoid accumulation in plants.
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Affiliation(s)
- Tianhu Sun
- Robert W Holley Center for Agriculture and Health, USDA-ARS, Cornell University, Ithaca, New York, 14853, USA; Plant Breeding and Genetics Section, School of Integrative Plant Science, Cornell University, Ithaca, New York, 14853, USA
| | - Li Li
- Robert W Holley Center for Agriculture and Health, USDA-ARS, Cornell University, Ithaca, New York, 14853, USA; Plant Breeding and Genetics Section, School of Integrative Plant Science, Cornell University, Ithaca, New York, 14853, USA.
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40
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Wang F, Yan J, Ahammed GJ, Wang X, Bu X, Xiang H, Li Y, Lu J, Liu Y, Qi H, Qi M, Li T. PGR5/PGRL1 and NDH Mediate Far-Red Light-Induced Photoprotection in Response to Chilling Stress in Tomato. FRONTIERS IN PLANT SCIENCE 2020; 11:669. [PMID: 32547581 PMCID: PMC7270563 DOI: 10.3389/fpls.2020.00669] [Citation(s) in RCA: 28] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/05/2019] [Accepted: 04/29/2020] [Indexed: 05/19/2023]
Abstract
Plants experience low ambient temperature and low red to far-red ratios (L-R/FR) of light due to vegetative shading and longer twilight durations in cool seasons. Low temperature induce photoinhibition through inactivation of the photosynthetic apparatus, however, the role of light quality on photoprotection during cold stress remains poorly understood. Here, we report that L-R/FR significantly prevents the overreduction of the entire intersystem electron transfer chain and the limitation of photosystem I (PSI) acceptor side, eventually alleviating the cold-induced photoinhibition. During cold stress, L-R/FR activated cyclic electron flow (CEF), enhanced protonation of PSII subunit S (PsbS) and de-epoxidation state of the xanthophyll cycle, and promoted energy-dependent quenching (qE) component of non-photochemical quenching (NPQ), enzyme activity of Foyer-Halliwell-Asada cycle and D1 proteins accumulation. However, L-R/FR -induced photoprotection pathways were compromised in tomato PROTON GRADIENT REGULATION5 (PGR5) and PGR5-LIKE PHOTOSYNTHETIC PHENOTYPE1A (PGRL1A) co-silenced plants and NADH DEHYDROGENASE-LIKE COMPLEX M (NDHM) -silenced plants during cold stress. Our results demonstrate that both PGR5/PGRL1- and NDH-dependent CEF mediate L-R/FR -induced cold tolerance by enhancing the thermal dissipation and the repair of photodamaged PSII, thereby mitigating the overreduction of electron carriers and the accumulation of reactive oxygen species. The study indicates that there is an anterograde link between photoreception and photoprotection in tomato plants during cold stress.
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Affiliation(s)
- Feng Wang
- College of Horticulture, Shenyang Agricultural University, Shenyang, China
- Key Laboratory of Protected Horticulture, Ministry of Education, Shenyang, China
- National and Local Joint Engineering Research Center of Northern Horticultural Facilities Design and Application Technology (Liaoning), Shenyang, China
- *Correspondence: Feng Wang, ;
| | - Jiarong Yan
- College of Horticulture, Shenyang Agricultural University, Shenyang, China
| | - Golam Jalal Ahammed
- College of Forestry, Henan University of Science and Technology, Luoyang, China
| | - Xiujie Wang
- College of Horticulture, Shenyang Agricultural University, Shenyang, China
| | - Xin Bu
- College of Horticulture, Shenyang Agricultural University, Shenyang, China
| | - Hengzuo Xiang
- College of Horticulture, Shenyang Agricultural University, Shenyang, China
| | - Yanbing Li
- College of Horticulture, Shenyang Agricultural University, Shenyang, China
| | - Jiazhi Lu
- College of Horticulture, Shenyang Agricultural University, Shenyang, China
| | - Yufeng Liu
- College of Horticulture, Shenyang Agricultural University, Shenyang, China
- Key Laboratory of Protected Horticulture, Ministry of Education, Shenyang, China
- National and Local Joint Engineering Research Center of Northern Horticultural Facilities Design and Application Technology (Liaoning), Shenyang, China
| | - Hongyan Qi
- College of Horticulture, Shenyang Agricultural University, Shenyang, China
- Key Laboratory of Protected Horticulture, Ministry of Education, Shenyang, China
- National and Local Joint Engineering Research Center of Northern Horticultural Facilities Design and Application Technology (Liaoning), Shenyang, China
| | - Mingfang Qi
- College of Horticulture, Shenyang Agricultural University, Shenyang, China
- Key Laboratory of Protected Horticulture, Ministry of Education, Shenyang, China
- National and Local Joint Engineering Research Center of Northern Horticultural Facilities Design and Application Technology (Liaoning), Shenyang, China
| | - Tianlai Li
- College of Horticulture, Shenyang Agricultural University, Shenyang, China
- Key Laboratory of Protected Horticulture, Ministry of Education, Shenyang, China
- National and Local Joint Engineering Research Center of Northern Horticultural Facilities Design and Application Technology (Liaoning), Shenyang, China
- Tianlai Li,
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Wang X, Liu BY, Zhao Q, Sun X, Li Y, Duan Z, Miao X, Luo S, Li J. Genomic Variance and Transcriptional Comparisons Reveal the Mechanisms of Leaf Color Affecting Palatability and Stressed Defense in Tea Plant. Genes (Basel) 2019; 10:genes10110929. [PMID: 31739562 PMCID: PMC6895910 DOI: 10.3390/genes10110929] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/04/2019] [Revised: 10/28/2019] [Accepted: 11/11/2019] [Indexed: 12/29/2022] Open
Abstract
Leaves are one of the most important organs of plants, and yet, the association between leaf color and consumable traits remains largely unclear. Tea leaves are an ideal study system with which to investigate the mechanism of how leaf coloration affects palatability, since tea is made from the leaves of the crop Camellia sinensis. Our genomic resequencing analysis of a tea cultivar ZiJuan (ZJ) with purple leaves and altered flavor revealed genetic variants when compared with the green-leaf, wild type cultivar YunKang(YK). RNA-Seq based transcriptomic comparisons of the bud and two youngest leaves in ZJ and YK identified 93%, 9% and 5% expressed genes that were shared in YK- and ZJ-specific cultivars, respectively. A comparison of both transcript abundance and particular metabolites revealed that the high expression of gene UFGT for anthocyanin biosynthesis is responsible for purple coloration, which competes with the intermediates for catechin-like flavanol biosynthesis. Genes with differential expression are enriched in response to stress, heat and defense, and are casually correlated with the environmental stress of ZJ plant origin in the Himalayas. In addition, the highly expressed C4H and LDOX genes for synthesizing flavanol precursors, ZJ-specific CLH1 for degrading chlorophyll, alternatively spliced C4H and FDR and low photosynthesis also contributed to the altered color and flavor of ZJ. Thus, our study provides a better molecular understanding of the effect of purple coloration on leaf flavor, and helps to guide future engineering improvement of palatability.
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Affiliation(s)
- Xuewen Wang
- College of tropic crops, Yunnan agricultural University, Puer 665000, China;
- Department of genetics, University of Georgia, Athens, GA 30602, USA
- Correspondence: (X.W.); (J.L.); Tel.: +1-706-542-7929 (X.W.); +86-879-220-6630 (J.L.)
| | - Ben-ying Liu
- Yunnan Key Laboratory of Tea Science, Menghai 666201, China; (B.-y.L.); (X.S.); (Y.L.)
- Tea Research Institute, Yunnan Academy of Agricultural Sciences, Menghai 666201, China
| | - Qingshi Zhao
- College of tropic crops, Yunnan agricultural University, Puer 665000, China;
| | - Xuemei Sun
- Yunnan Key Laboratory of Tea Science, Menghai 666201, China; (B.-y.L.); (X.S.); (Y.L.)
- Tea Research Institute, Yunnan Academy of Agricultural Sciences, Menghai 666201, China
| | - Youyong Li
- Yunnan Key Laboratory of Tea Science, Menghai 666201, China; (B.-y.L.); (X.S.); (Y.L.)
- Tea Research Institute, Yunnan Academy of Agricultural Sciences, Menghai 666201, China
| | - Zhifen Duan
- Yunnan Key Laboratory of Tea Science, Menghai 666201, China; (B.-y.L.); (X.S.); (Y.L.)
- Tea Research Institute, Yunnan Academy of Agricultural Sciences, Menghai 666201, China
| | - Xinli Miao
- School of mathematics and statistics, Chuxiong Normal University, Chuxiong 675000, China;
| | - Shan Luo
- College of agriculture and biotechnology, Yunnan Agricultural University, Kunming 650201, China;
| | - Jianbin Li
- College of tropic crops, Yunnan agricultural University, Puer 665000, China;
- Correspondence: (X.W.); (J.L.); Tel.: +1-706-542-7929 (X.W.); +86-879-220-6630 (J.L.)
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Babla M, Cai S, Chen G, Tissue DT, Cazzonelli CI, Chen ZH. Molecular Evolution and Interaction of Membrane Transport and Photoreception in Plants. Front Genet 2019; 10:956. [PMID: 31681411 PMCID: PMC6797626 DOI: 10.3389/fgene.2019.00956] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/03/2018] [Accepted: 09/06/2019] [Indexed: 12/20/2022] Open
Abstract
Light is a vital regulator that controls physiological and cellular responses to regulate plant growth, development, yield, and quality. Light is the driving force for electron and ion transport in the thylakoid membrane and other membranes of plant cells. In different plant species and cell types, light activates photoreceptors, thereby modulating plasma membrane transport. Plants maximize their growth and photosynthesis by facilitating the coordinated regulation of ion channels, pumps, and co-transporters across membranes to fine-tune nutrient uptake. The signal-transducing functions associated with membrane transporters, pumps, and channels impart a complex array of mechanisms to regulate plant responses to light. The identification of light responsive membrane transport components and understanding of their potential interaction with photoreceptors will elucidate how light-activated signaling pathways optimize plant growth, production, and nutrition to the prevailing environmental changes. This review summarizes the mechanisms underlying the physiological and molecular regulations of light-induced membrane transport and their potential interaction with photoreceptors in a plant evolutionary and nutrition context. It will shed new light on plant ecological conservation as well as agricultural production and crop quality, bringing potential nutrition and health benefits to humans and animals.
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Affiliation(s)
- Mohammad Babla
- School of Science and Health, Western Sydney University, Penrith, NSW, Australia
| | - Shengguan Cai
- School of Science and Health, Western Sydney University, Penrith, NSW, Australia
- College of Agriculture and Biotechnology, Zhejiang University, Hangzhou, China
| | - Guang Chen
- College of Agriculture and Biotechnology, Zhejiang University, Hangzhou, China
| | - David T. Tissue
- Hawkesbury Institute for the Environment, Western Sydney University, Penrith, NSW, Australia
| | | | - Zhong-Hua Chen
- School of Science and Health, Western Sydney University, Penrith, NSW, Australia
- Hawkesbury Institute for the Environment, Western Sydney University, Penrith, NSW, Australia
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Kolbert Z, Feigl G, Freschi L, Poór P. Gasotransmitters in Action: Nitric Oxide-Ethylene Crosstalk during Plant Growth and Abiotic Stress Responses. Antioxidants (Basel) 2019; 8:E167. [PMID: 31181724 PMCID: PMC6616412 DOI: 10.3390/antiox8060167] [Citation(s) in RCA: 41] [Impact Index Per Article: 8.2] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/15/2019] [Revised: 06/03/2019] [Accepted: 06/05/2019] [Indexed: 01/29/2023] Open
Abstract
Since their first description as atmospheric gases, it turned out that both nitric oxide (NO) and ethylene (ET) are multifunctional plant signals. ET and polyamines (PAs) use the same precursor for their synthesis, and NO can be produced from PA oxidation. Therefore, an indirect metabolic link between NO and ET synthesis can be considered. NO signal is perceived primarily through S-nitrosation without the involvement of a specific receptor, while ET signal is sensed by a well-characterized receptor complex. Both NO and ET are synthetized by plants at various developmental stages (e.g., seeds, fruits) and as a response to numerous environmental factors (e.g., heat, heavy metals) and they mutually regulate each other's levels. Most of the growth and developmental processes (e.g., fruit ripening, de-etiolation) are regulated by NO-ET antagonism, while in abiotic stress responses, both antagonistic (e.g., dark-induced stomatal opening, cadmium-induced cell death) and synergistic (e.g., UV-B-induced stomatal closure, iron deficiency-induced expression of iron acquisition genes) NO-ET interplays have been revealed. Despite the numerous pieces of experimental evidence revealing NO-ET relationships in plants, the picture is far from complete. Understanding the mechanisms of NO-ET interactions may contribute to the increment of yield and intensification of stress tolerance of crop plants in changing environments.
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Affiliation(s)
- Zsuzsanna Kolbert
- Department of Plant Biology, University of Szeged, 6726 Szeged, Hungary.
| | - Gábor Feigl
- Department of Plant Biology, University of Szeged, 6726 Szeged, Hungary.
| | - Luciano Freschi
- Laboratory of Plant Physiology and Biochemistry, Department of Botany, University of Sao Paulo, Sao Paulo 05422-970, Brazil.
| | - Péter Poór
- Department of Plant Biology, University of Szeged, 6726 Szeged, Hungary.
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Han X, Chang X, Zhang Z, Chen H, He H, Zhong B, Deng XW. Origin and Evolution of Core Components Responsible for Monitoring Light Environment Changes during Plant Terrestrialization. MOLECULAR PLANT 2019; 12:847-862. [PMID: 31009752 DOI: 10.1016/j.molp.2019.04.006] [Citation(s) in RCA: 61] [Impact Index Per Article: 12.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/11/2019] [Revised: 04/07/2019] [Accepted: 04/08/2019] [Indexed: 05/22/2023]
Abstract
Light serves as the source of energy as well as an information signal for photosynthetic plants. During evolution, plants have acquired the ability to monitor environmental light radiation and adjust their developmental patterns to optimally utilize light energy for photosynthesis. The mechanisms of light perception and signal transduction have been comprehensively studied in past decades, mostly in a few model plants, including Arabidopsis thaliana. However, systematic analyses of the origin and evolution of core components involved in light perception and signaling are still lacking. In this study, we took advantage of the recently sequenced genomes and transcriptomes covering all the main Archaeplastida clades in the public domain to identify orthologous genes of core components involved in light perception and signaling and to reconstruct their evolutionary history. Our analyses suggested that acclimation to different distribution of light quality in new environments led to the origination of specific light signaling pathways in plants. The UVR8 (UV Resistance Locus 8) signaling pathway originated during the movement of plants from the deeper sea to shallow water and enabled plants to deal with ultraviolet B light (UV-B). After acquisition of UV-B adaptation, origination of the phytochrome signaling pathway helped plants to colonize water surface where red light became the prominent light energy source. The seedling emergence pathway, which is mediated by a combination of light and phytohormone signals that orchestrate plant growth pattern transitions, originated before the emergence of seed plants. Although cryptochromes and some key components of E3 ubiquitin ligase systems already existed before the divergence of the plant and animal kingdoms, the coevolution and optimization of light perception and downstream signal transduction components, including key transcription factors and E3 ubiquitin ligase systems, are evident during plant terrestrialization.
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Affiliation(s)
- Xue Han
- School of Advanced Agriculture Sciences and School of Life Sciences, State Key Laboratory of Protein and Plant Gene Research, Peking University, Beijing 100871, China
| | - Xin Chang
- College of Life Sciences, Nanjing Normal University, Nanjing 210046, China
| | - Zhenhua Zhang
- College of Life Sciences, Nanjing Normal University, Nanjing 210046, China
| | - Haodong Chen
- School of Advanced Agriculture Sciences and School of Life Sciences, State Key Laboratory of Protein and Plant Gene Research, Peking University, Beijing 100871, China
| | - Hang He
- School of Advanced Agriculture Sciences and School of Life Sciences, State Key Laboratory of Protein and Plant Gene Research, Peking University, Beijing 100871, China.
| | - Bojian Zhong
- College of Life Sciences, Nanjing Normal University, Nanjing 210046, China.
| | - Xing Wang Deng
- School of Advanced Agriculture Sciences and School of Life Sciences, State Key Laboratory of Protein and Plant Gene Research, Peking University, Beijing 100871, China.
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Seo DH, Yoon GM. Light-induced stabilization of ACS contributes to hypocotyl elongation during the dark-to-light transition in Arabidopsis seedlings. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2019; 98:898-911. [PMID: 30776167 DOI: 10.1111/tpj.14289] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/07/2019] [Revised: 02/07/2019] [Accepted: 02/11/2019] [Indexed: 05/25/2023]
Abstract
Hypocotyl growth during seedling emergence is a crucial developmental transition influenced by light and phytohormones such as ethylene. Ethylene and light antagonistically control hypocotyl growth in either continuous light or darkness. However, how ethylene and light regulate hypocotyl growth, including seedling emergence, during the dark-to-light transition remains elusive. Here, we show that ethylene and light cooperatively stimulate a transient increase in hypocotyl growth during the dark-to-light transition via the light-mediated stabilization of 1-aminocyclopropane-1-carboxylic acid (ACC) synthases (ACSs), the rate-limiting enzymes in ethylene biosynthesis. We found that, in contrast to the known inhibitory role of light in hypocotyl growth, light treatment transiently increases hypocotyl growth in wild-type etiolated seedlings. Moreover, ACC, the direct precursor of ethylene, accentuates the effects of light on hypocotyl elongation during the dark-to-light transition. We determined that light leads to the transient elongation of hypocotyls by stabilizing the ACS5 protein during the dark-to-light transition. Furthermore, biochemical analysis of an ACS5 mutant protein bearing an alteration in the C-terminus indicated that light stabilizes ACS5 by inhibiting the degradation mechanism that acts through the C-terminus of ACS5. Our study reveals that plants regulate hypocotyl elongation during seedling establishment by coordinating light-induced ethylene biosynthesis at the post-translational level. Moreover, the stimulatory role of light on hypocotyl growth during the dark-to-light transition provides additional insights into the known inhibitory role of light in hypocotyl development.
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Affiliation(s)
- Dong Hye Seo
- Department of Botany and Plant Pathology, Purdue University, West Lafayette, IN, 47907, USA
- Purdue University Center for Plant Biology, Purdue University, West Lafayette, IN, 47907, USA
| | - Gyeong Mee Yoon
- Department of Botany and Plant Pathology, Purdue University, West Lafayette, IN, 47907, USA
- Purdue University Center for Plant Biology, Purdue University, West Lafayette, IN, 47907, USA
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Ptushenko OS, Ptushenko VV. Tradescantia-based models: a powerful looking glass for investigation of photoacclimation and photoadaptation in plants. PHYSIOLOGIA PLANTARUM 2019; 166:120-133. [PMID: 30854663 DOI: 10.1111/ppl.12963] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/24/2018] [Revised: 03/06/2019] [Accepted: 03/06/2019] [Indexed: 06/09/2023]
Abstract
Here, we summarize diverse evidence from species that belong to the genus Tradescantia, which we propose as handy and versatile models for studies of the ecology of photosynthesis and the mechanisms of photoacclimation in higher plants. A valuable feature of this genus is the amazingly broad range of ecological niches occupied by its species: from shady understory of tropical rainforest to deserts and semideserts. The former habitats demand shade tolerance (e.g. that featured by Tradescantia fluminensis), whereas the latter requires succulence and/or high light stress tolerance (evident in e.g. Tradescantia navicularis). At the same time, the acclimative traits of Tradescantia species seem quite moderate at first glance. Certainly, their basic principles of acclimation seem to differ in some aspects from the ones typical for most of other higher plants. This review presents a systematic analysis of irradiance responses of Tradescantia species studied on different timescales. The specifics of Tradescantia responses to irradiance make the plants of this genus a 'multitool' for studies in this field. Similarity of irradiance acclimation patterns is a characteristic feature in the ecologically contrasting Tradescantia species, which may inspire further insights into physiology and evolution of plants.
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Affiliation(s)
- Oxana S Ptushenko
- Faculty of Bioengineering and Bioinformatics, Lomonosov Moscow State University, Moscow, 119234, Russia
| | - Vasily V Ptushenko
- Belozersky Institute of Physico-Chemical Biology, Lomonosov Moscow State University, Moscow, 119234, Russia
- Emanuel Institute of Biochemical Physics, Russian Academy of Sciences, Moscow, 119334, Russia
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Mátai A, Jakab G, Hideg É. Single-dose β-aminobutyric acid treatment modifies tobacco (Nicotiana tabacum L.) leaf acclimation to consecutive UV-B treatment. Photochem Photobiol Sci 2019; 18:359-366. [PMID: 30534744 DOI: 10.1039/c8pp00437d] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/29/2018] [Accepted: 11/23/2018] [Indexed: 12/18/2022]
Abstract
β-Aminobutyric acid (BABA) pre-treatment has been shown to alter both biotic and abiotic stress responses. The present study extends this observation to acclimative UV-B-response, which has not been explored in this context so far. A single soil application of 300 ppm BABA modified the non-enzymatic antioxidant capacities and the leaf hydrogen peroxide levels in tobacco (Nicotiana tabacum L.) leaves in response to a 9-day treatment with 5.4 kJ m-2 d-1 biologically effective supplementary UV-B radiation in a model experiment that was performed in a growth chamber. BABA decreased leaf hydrogen peroxide levels both as a single factor and in combination with UV-B, but neither BABA nor UV-B affected leaf photochemistry significantly. The total antioxidant capacities were increased by either BABA or UV-B, and this response was additive in BABA pre-treated leaves. These results together with the observed changes in hydroxyl radical neutralising ability and non-enzymatic hydrogen peroxide antioxidant capacities show that BABA pre-treatment (i) has a long-term effect on leaf antioxidants even in the absence of other factors and (ii) modifies acclimative readjustment of prooxidant-antioxidant balance in response to UV-B. BABA-inducible antioxidants do not include phenolic compounds as a UV-B-induced increase in the adaxial leaf flavonoid index and total leaf extract UV absorption were unaffected by BABA.
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Affiliation(s)
- Anikó Mátai
- Department of Plant Biology, University of Pécs, Hungary
| | - Gábor Jakab
- Department of Plant Biology, University of Pécs, Hungary
- Research Institute for Viticulture and Oenology, University of Pécs, Hungary
| | - Éva Hideg
- Department of Plant Biology, University of Pécs, Hungary.
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Bourbousse C, Barneche F, Laloi C. Plant Chromatin Catches the Sun. FRONTIERS IN PLANT SCIENCE 2019; 10:1728. [PMID: 32038692 PMCID: PMC6992579 DOI: 10.3389/fpls.2019.01728] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/31/2019] [Accepted: 12/09/2019] [Indexed: 05/08/2023]
Abstract
Plants use solar radiation as energy source for photosynthesis. They also take advantage of the information provided by the varying properties of sunlight, such as wavelength, orientation, and periodicity, to trigger physiological and developmental adaptations to a changing environment. After more than a century of research efforts in plant photobiology, multiple light signaling pathways converging onto chromatin-based mechanisms have now been identified, which in some instances play critical roles in plant phenotypic plasticity. In addition to locus-specific changes linked to transcription regulation, light signals impact higher-order chromatin organization. Here, we summarize current knowledge on how light can affect the global composition and the spatial distribution of chromatin domains. We introduce emerging questions on the functional links between light signaling and the epigenome, and further discuss how different chromatin regulatory layers may interconnect during plant adaptive responses to light.
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Affiliation(s)
- Clara Bourbousse
- Institut de Biologie de l'Ecole Normale Supérieure (IBENS), Ecole Normale Supérieure, CNRS, INSERM, Université PSL, Paris, France
- *Correspondence: Clara Bourbousse, ; Fredy Barneche,
| | - Fredy Barneche
- Institut de Biologie de l'Ecole Normale Supérieure (IBENS), Ecole Normale Supérieure, CNRS, INSERM, Université PSL, Paris, France
- *Correspondence: Clara Bourbousse, ; Fredy Barneche,
| | - Christophe Laloi
- Aix Marseille Univ, CEA, CNRS, BIAM, Luminy Génétique et Biophysique des Plantes, Marseille, France
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D’Amico-Damião V, Carvalho RF. Cryptochrome-Related Abiotic Stress Responses in Plants. FRONTIERS IN PLANT SCIENCE 2018; 9:1897. [PMID: 30619439 PMCID: PMC6305750 DOI: 10.3389/fpls.2018.01897] [Citation(s) in RCA: 20] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/17/2018] [Accepted: 12/06/2018] [Indexed: 05/03/2023]
Abstract
It is well known that light is a crucial environmental factor that has a fundamental role in plant growth and development from seed germination to fruiting. For this process, plants contain versatile and multifaceted photoreceptor systems to sense variations in the light spectrum and to acclimate to a range of ambient conditions. Five main groups of photoreceptors have been found in higher plants, cryptochromes, phototropins, UVR8, zeitlupes, and phytochromes, but the last one red/far red wavelengths photoreceptor is the most characterized. Among the many responses modulated by phytochromes, these molecules play an important role in biotic and abiotic stress responses, which is one of the most active research topics in plant biology, especially their effect on agronomic traits. However, regarding the light spectrum, it is not surprising to consider that other photoreceptors are also part of the stress response modulated by light. In fact, it has become increasingly evident that cryptochromes, which mainly absorb in the blue light region, also act as key regulators of a range of plant stress responses, such as drought, salinity, heat, and high radiation. However, this information is rarely evidenced in photomorphogenetic studies. Therefore, the scope of the present review is to compile and discuss the evidence on the abiotic stress responses in plants that are modulated by cryptochromes.
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