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Gao Y, Zhou L, Ouyang S, Sun J, Zhou Q. Environmental applications and risks of engineered nanomaterials in removing petroleum oil in soil. THE SCIENCE OF THE TOTAL ENVIRONMENT 2024; 946:174165. [PMID: 38925379 DOI: 10.1016/j.scitotenv.2024.174165] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/11/2024] [Revised: 05/30/2024] [Accepted: 06/18/2024] [Indexed: 06/28/2024]
Abstract
Oil-contaminated soil posed serious threats to the ecosystems and human health. The unique and tunable properties of engineered nanomaterials (ENMs) enable new technologies for removing and repairing oil-contaminated soil. However, few studies systematically examined the linkage between the change of physicochemical properties and the removal efficiency and environmental functions (e.g., potential risk) of ENMs, which is vital for understanding the ENMs environmental sustainability and utilization as a safety product. Thus, this review briefly summarized the environmental applications of ENMs to removing petroleum oil from complex soil systems: Theoretical and practical fundamentals (e.g., excellent physicochemical properties, environmental stability, controlled release, and recycling technologies), and various ENMs (e.g., iron-based, carbon-based, and metal oxides nanomaterials) remediation case studies. Afterward, this review highlights the removing mechanism (e.g., adsorption, photocatalysis, oxidation/reduction, biodegradation) and the impact factor (e.g., nanomaterials species, natural organic matter, and soil matrix) of ENMs during the remediation process in soil ecosystems. Both positive and negative effects of ENMs on terrestrial organisms have been identified, which are mainly derived from their diverse physicochemical properties. In linking nanotechnology applications for repairing oil-contaminated soil back to the physical and chemical properties of ENMs, this critical review aims to raise the research attention on using ENMs as a fundamental guide or even tool to advance soil treatment technologies.
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Affiliation(s)
- Yang Gao
- School of Hydraulic and Environmental Engineering, Changsha University of Science and Technology, Changsha 410114, China
| | - Letao Zhou
- School of Hydraulic and Environmental Engineering, Changsha University of Science and Technology, Changsha 410114, China
| | - Shaohu Ouyang
- Key Laboratory of Pollution Processes and Environmental Criteria (Ministry of Education), Carbon Neutrality Interdisciplinary Science Center, College of Environmental Science and Engineering, Nankai University, Tianjin 300350, China.
| | - Jing Sun
- Center of Eco-environmental Monitoring and Scientific Research, Administration of Ecology and Environment of Haihe River Basin and Beihai Sea Area, Ministry of Ecology and Environment of People's Republic of China, Tianjin 300170, China.
| | - Qixing Zhou
- Key Laboratory of Pollution Processes and Environmental Criteria (Ministry of Education), Carbon Neutrality Interdisciplinary Science Center, College of Environmental Science and Engineering, Nankai University, Tianjin 300350, China
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2
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Chen J, Zhuang J, Dai T, Zhang R, Zeng Y, Jiang B, Guo H, Guo X, Yang Y. Enhancing soil petrochemical contaminant remediation through nutrient addition and exogenous bacterial introduction. JOURNAL OF HAZARDOUS MATERIALS 2024; 476:135078. [PMID: 38964043 DOI: 10.1016/j.jhazmat.2024.135078] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/04/2024] [Revised: 06/28/2024] [Accepted: 06/29/2024] [Indexed: 07/06/2024]
Abstract
Biostimulation (providing favorable environmental conditions for microbial growth) and bioaugmentation (introducing exogenous microorganisms) are effective approaches in the bioremediation of petroleum-contaminated soil. However, uncertainty remains in the effectiveness of these two approaches in practical application. In this study, we constructed mesocosms using petroleum hydrocarbon-contaminated soil. We compared the effects of adding nutrients, introducing exogenous bacterial degraders, and their combination on remediating petroleum contamination in the soil. Adding nutrients more effectively accelerated total petroleum hydrocarbon (TPH) degradation than other treatments in the initial 60 days' incubation. Despite both approaches stimulating bacterial richness, the community turnover caused by nutrient addition was gentler than bacterial degrader introduction. As TPH concentrations decreased, we observed a succession in microbial communities characterized by a decline in copiotrophic, fast-growing bacterial r-strategists with high rRNA operon (rrn) copy numbers. Ecological network analysis indicated that both nutrient addition and bacterial degrader introduction enhanced the complexity and stability of bacterial networks. Compared to the other treatment, the bacterial network with nutrient addition had more keystone species and a higher proportion of negative associations, factors that may enhance microbial community stability. Our study demonstrated that nutrient addition effectively regulates community succession and ecological interaction to accelerate the soil TPH degradation.
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Affiliation(s)
- Jiayu Chen
- School of Energy and Environmental Engineering, University of Science and Technology Beijing, Beijing 100083, China
| | - Jugui Zhuang
- School of Environment, Tsinghua University, Beijing 100084, China
| | - Tianjiao Dai
- School of Environment, Tsinghua University, Beijing 100084, China; School of Water Resources and Environment, China University of Geosciences (Beijing), Beijing 100083, China.
| | - Ruihuan Zhang
- School of Environment, Tsinghua University, Beijing 100084, China
| | - Yufei Zeng
- School of Environment, Tsinghua University, Beijing 100084, China
| | - Bo Jiang
- School of Energy and Environmental Engineering, University of Science and Technology Beijing, Beijing 100083, China
| | - Huaming Guo
- School of Water Resources and Environment, China University of Geosciences (Beijing), Beijing 100083, China
| | - Xue Guo
- School of Environment, Tsinghua University, Beijing 100084, China; Research Center for Eco-Environmental Sciences, Chinese Academy of Science, Beijing 100085, China
| | - Yunfeng Yang
- School of Environment, Tsinghua University, Beijing 100084, China; Institute of Environment and Ecology, Tsinghua Shenzhen International Graduate School, Shenzhen 518055, China
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Aso RE, Obuekwe IS. Polycyclic aromatic hydrocarbon: underpinning the contribution of specialist microbial species to contaminant mitigation in the soil. ENVIRONMENTAL MONITORING AND ASSESSMENT 2024; 196:654. [PMID: 38913190 DOI: 10.1007/s10661-024-12778-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/04/2024] [Accepted: 06/06/2024] [Indexed: 06/25/2024]
Abstract
The persistence of PAHs poses a significant challenge for conventional remediation approaches, necessitating the exploration of alternative, sustainable strategies for their mitigation. This review underscores the vital role of specialized microbial species (nitrogen-fixing, phosphate-solubilizing, and biosurfactant-producing bacteria) in tackling the environmental impact of polycyclic aromatic hydrocarbons (PAHs). These resistant compounds demand innovative remediation strategies. The study explores microbial metabolic capabilities for converting complex PAHs into less harmful byproducts, ensuring sustainable mitigation. Synthesizing literature from 2016 to 2023, it covers PAH characteristics, sources, and associated risks. Degradation mechanisms by bacteria and fungi, key species, and enzymatic processes are examined. Nitrogen-fixing and phosphate-solubilizing bacteria contributions in symbiotic relationships with plants are highlighted. Biosurfactant-producing bacteria enhance PAH solubility, expanding microbial accessibility for degradation. Cutting-edge trends in omics technologies, synthetic biology, genetic engineering, and nano-remediation offer promising avenues. Recommendations emphasize genetic regulation, field-scale studies, sustainability assessments, interdisciplinary collaboration, and knowledge dissemination. These insights pave the way for innovative, sustainable PAH-contaminated environment restoration.
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Affiliation(s)
- Rufus Emamoge Aso
- Department of Microbiology, Faculty of Life Sciences, University of Benin, Benin, Edo State, Nigeria
| | - Ifeyinwa Sarah Obuekwe
- Department of Microbiology, Faculty of Life Sciences, University of Benin, Benin, Edo State, Nigeria.
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Yarahmadi A, Heidari S, Sepahvand P, Afkhami H, Kheradjoo H. Microplastics and environmental effects: investigating the effects of microplastics on aquatic habitats and their impact on human health. Front Public Health 2024; 12:1411389. [PMID: 38912266 PMCID: PMC11191580 DOI: 10.3389/fpubh.2024.1411389] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/02/2024] [Accepted: 05/13/2024] [Indexed: 06/25/2024] Open
Abstract
Microplastics (MPs) are particles with a diameter of <5 mm. The disposal of plastic waste into the environment poses a significant and pressing issue concern globally. Growing worry has been expressed in recent years over the impact of MPs on both human health and the entire natural ecosystem. MPs impact the feeding and digestive capabilities of marine organisms, as well as hinder the development of plant roots and leaves. Numerous studies have shown that the majority of individuals consume substantial quantities of MPs either through their dietary intake or by inhaling them. MPs have been identified in various human biological samples, such as lungs, stool, placenta, sputum, breast milk, liver, and blood. MPs can cause various illnesses in humans, depending on how they enter the body. Healthy and sustainable ecosystems depend on the proper functioning of microbiota, however, MPs disrupt the balance of microbiota. Also, due to their high surface area compared to their volume and chemical characteristics, MPs act as pollutant absorbers in different environments. Multiple policies and initiatives exist at both the domestic and global levels to mitigate pollution caused by MPs. Various techniques are currently employed to remove MPs, such as biodegradation, filtration systems, incineration, landfill disposal, and recycling, among others. In this review, we will discuss the sources and types of MPs, the presence of MPs in different environments and food, the impact of MPs on human health and microbiota, mechanisms of pollutant adsorption on MPs, and the methods of removing MPs with algae and microbes.
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Affiliation(s)
- Aref Yarahmadi
- Department of Biology, Khorramabad Branch, Islamic Azad University, Khorramabad, Iran
| | | | - Parisa Sepahvand
- Department of Biology, Khorramabad Branch, Islamic Azad University, Khorramabad, Iran
| | - Hamed Afkhami
- Nervous System Stem Cells Research Center, Semnan University of Medical Sciences, Semnan, Iran
- Cellular and Molecular Research Center, Qom University of Medical Sciences, Qom, Iran
- Department of Medical Microbiology, Faculty of Medicine, Shahed University, Tehran, Iran
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Lee HC, Chen SC, Sheu YT, Yao CL, Lo KH, Kao CM. Bioremediation of trichloroethylene-contaminated groundwater using green carbon-releasing substrate with pH control capability. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2024; 348:123768. [PMID: 38493868 DOI: 10.1016/j.envpol.2024.123768] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/10/2023] [Revised: 01/01/2024] [Accepted: 03/09/2024] [Indexed: 03/19/2024]
Abstract
In this research, a sustainable substrate, termed green and long-lasting substrate (GLS), featuring a blend of emulsified substrate (ES) and modified rice husk ash (m-RHA) was devised. The primary objective was to facilitate the bioremediation of groundwater contaminated with trichloroethylene (TCE) using innovative GLS for slow carbon release and pH control. The GLS was concocted by homogenizing a mixture of soybean oil, surfactants (Simple Green™ and soya lecithin), and m-RHA, ensuring a gradual release of carbon sources. The hydrothermal synthesis was applied for the production of m-RHA production. The analyses demonstrate that m-RHA were uniform sphere-shape granules with diameters in micro-scale ranges. Results from the microcosm study show that approximately 83% of TCE could be removed (initial TCE concentration = 7.6 mg/L) with GLS supplement after 60 days of operation. Compared to other substrates without RHA addition, higher TCE removal efficiency was obtained, and higher Dehalococcoides sp. (DHC) population and hydA gene (hydrogen-producing gene) copy number were also detected in microcosms with GLS addition. Higher hydrogen concentrations enhanced the DHC growth, which corresponded to the increased DHC populations. The addition of the GLS could provide alkalinity at the initial stage to neutralize the acidified groundwater caused by the produced organic acids after substrate biodegradation, which was advantageous to DHC growth and TCE dechlorination. The addition of m-RHA reached an increased TCE removal efficiency, which was due to the fact that the m-RHA had the zeolite-like structure with a higher surface area and lower granular diameter, and thus, it resulted in a more effective initial adsorption effect. Therefore, a significant amount of TCE could be adsorbed onto the surface of m-RHA, which caused a rapid TCE removal through adsorption. The carbon substrates released from m-RHA could then enhance the subsequent dechlorination. The developed GLS is an environmentally-friendly and green substrate.
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Affiliation(s)
- Hsin-Chia Lee
- Institute of Environmental Engineering, National Sun Yat-Sen University, Kaohsiung, Taiwan
| | - Ssu-Ching Chen
- Department of Life Sciences, National Central University, Chung-Li City, Taoyuan, Taiwan
| | - Yih-Terng Sheu
- General Education Center, National University of Kaohsiung, Kaohsiung, Taiwan
| | - Chao-Ling Yao
- Department of Chemical Engineering, National Cheng Kung University, Tainan, Taiwan
| | - Kai-Hung Lo
- Institute of Environmental Engineering, National Sun Yat-Sen University, Kaohsiung, Taiwan
| | - Chih-Ming Kao
- Institute of Environmental Engineering, National Sun Yat-Sen University, Kaohsiung, Taiwan.
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Kuddus M, Roohi, Bano N, Sheik GB, Joseph B, Hamid B, Sindhu R, Madhavan A. Cold-active microbial enzymes and their biotechnological applications. Microb Biotechnol 2024; 17:e14467. [PMID: 38656876 PMCID: PMC11042537 DOI: 10.1111/1751-7915.14467] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/26/2023] [Revised: 03/14/2024] [Accepted: 03/21/2024] [Indexed: 04/26/2024] Open
Abstract
Microorganisms known as psychrophiles/psychrotrophs, which survive in cold climates, constitute majority of the biosphere on Earth. Their capability to produce cold-active enzymes along with other distinguishing characteristics allows them to survive in the cold environments. Due to the relative ease of large-scale production compared to enzymes from plants and animals, commercial uses of microbial enzyme are alluring. The ocean depths, polar, and alpine regions, which make up over 85% of the planet, are inhabited to cold ecosystems. Microbes living in these regions are important for their metabolic contribution to the ecosphere as well as for their enzymes, which may have potential industrial applications. Cold-adapted microorganisms are a possible source of cold-active enzymes that have high catalytic efficacy at low and moderate temperatures at which homologous mesophilic enzymes are not active. Cold-active enzymes can be used in a variety of biotechnological processes, including food processing, additives in the detergent and food industries, textile industry, waste-water treatment, biopulping, environmental bioremediation in cold climates, biotransformation, and molecular biology applications with great potential for energy savings. Genetically manipulated strains that are suitable for producing a particular cold-active enzyme would be crucial in a variety of industrial and biotechnological applications. The potential advantage of cold-adapted enzymes will probably lead to a greater annual market than for thermo-stable enzymes in the near future. This review includes latest updates on various microbial source of cold-active enzymes and their biotechnological applications.
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Affiliation(s)
- Mohammed Kuddus
- Department of Biochemistry, College of MedicineUniversity of HailHailSaudi Arabia
| | - Roohi
- Protein Research Laboratory, Department of BioengineeringIntegral UniversityLucknowIndia
| | - Naushin Bano
- Protein Research Laboratory, Department of BioengineeringIntegral UniversityLucknowIndia
| | | | - Babu Joseph
- Department of Clinical Laboratory Sciences, College of Applied Medical SciencesShaqra UniversityShaqraSaudi Arabia
| | - Burhan Hamid
- Center of Research for DevelopmentUniversity of KashmirSrinagarIndia
| | - Raveendran Sindhu
- Department of Food TechnologyTKM Institute of TechnologyKollamKeralaIndia
| | - Aravind Madhavan
- School of BiotechnologyAmrita Vishwa Vidyapeetham, AmritapuriKollamKeralaIndia
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Wei Z, Wei Y, Liu Y, Niu S, Xu Y, Park JH, Wang JJ. Biochar-based materials as remediation strategy in petroleum hydrocarbon-contaminated soil and water: Performances, mechanisms, and environmental impact. J Environ Sci (China) 2024; 138:350-372. [PMID: 38135402 DOI: 10.1016/j.jes.2023.04.008] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/01/2023] [Revised: 04/05/2023] [Accepted: 04/12/2023] [Indexed: 12/24/2023]
Abstract
Petroleum contamination is considered as a major risk to the health of humans and environment. Biochars as low-cost and eco-friendly carbon materials, have been widely used for the removal of petroleum hydrocarbon in the environment. The purpose of this paper is to review the performance, mechanisms, and potential environmental toxicity of biochar, modified biochar and its integration use with other materials in petroleum contaminated soil and water. Specifically, the use of biochar in oil-contaminated water and soil as well as the factors that could influence the removal ability of biochar were systematically evaluated. In addition, the modification and integrated use of biochar for improving the removal efficiency were summarized from the aspects of sorption, biodegradation, chemical degradation, and reusability. Moreover, the functional impacts and associated ecotoxicity of pristine and modified biochars in various environments were demonstrated. Finally, some shortcoming of current approaches, and future research needs were provided for the future direction and challenges of modified biochar research. Overall, this paper gain insight into biochar application in petroleum remediation from the perspectives of performance enhancement and environmental sustainability.
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Affiliation(s)
- Zhuo Wei
- Faculty of Environmental Science & Engineering, Kunming University of Science & Technology, Kunming 650500, China; School of Plant, Environment & Soil Sciences, Louisiana State University AgCenter. Baton Rouge, LA 70803, USA
| | - Yi Wei
- Faculty of Environmental Science & Engineering, Kunming University of Science & Technology, Kunming 650500, China
| | - Yang Liu
- Faculty of Environmental Science & Engineering, Kunming University of Science & Technology, Kunming 650500, China
| | - Shuai Niu
- Faculty of Environmental Science & Engineering, Kunming University of Science & Technology, Kunming 650500, China
| | - Yaxi Xu
- Faculty of Environmental Science & Engineering, Kunming University of Science & Technology, Kunming 650500, China
| | - Jong-Hwan Park
- Department of Life Resources Industry, Dong-A University, 37, Nakdong-daero 550 beon-gil, Saha-gu, Busan 49315, South Korea
| | - Jim J Wang
- School of Plant, Environment & Soil Sciences, Louisiana State University AgCenter. Baton Rouge, LA 70803, USA.
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8
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Zhao J, Cai L, Zhang A, Li G, Zhang Y, Filatova I, Liu Y. Simultaneous remediation of diesel-polluted soil and promoted ryegrass growth by non-thermal plasma pretreatment. THE SCIENCE OF THE TOTAL ENVIRONMENT 2024; 912:169295. [PMID: 38110099 DOI: 10.1016/j.scitotenv.2023.169295] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/19/2023] [Revised: 12/08/2023] [Accepted: 12/09/2023] [Indexed: 12/20/2023]
Abstract
The remediation of petroleum-polluted soil has garnered significant global attention. In this study, a pot-culture experiment was conducted to assess the feasibility of using non-thermal plasma (NTP) as an efficient and economic-friendly pretreatment method in the phytoremediation of diesel-polluted soil. The remediation effectiveness was evaluated via both the removal of diesel and the ryegrass growth. Specifically, at the 50th d of ryegrass growth, the increase of diesel removal efficiency with NTP pretreatment ranged from 16 % to 30 %. Moreover, both clean and diesel-polluted soils pretreated by NTP promoted the growth of ryegrass in shoot lengths and biomass especially after the 35th d. It was found that nitrate nitrogen fixed by NTP not only stimulated the nitrate reductase activities in leaves and promoted plant growth, but also was transformed to more ammonia nitrogen for organism life activity. Subsequent investigation proved that the related nitrogen-metabolism activities of microbes were enriched in rhizosphere soils with NTP pretreatment. Furthermore, NTP treatment increased the abundance of beneficial microbial communities in diesel soil rhizosphere on the 42nd d of growth period. In addition, changes in the proportions of soil dissolved organic matter indicated enhanced nutrient cycling in soils with NTP pretreatment. These promotional effects underscored the contribution of NTP pretreatment in rapidly detoxifying diesel-contaminated soil within 10 min and accelerated the establishment of ryegrass ecosystem. This study provides valuable insights into the role of nitrogen fixation and offers an efficient and promising advanced approach for the phytoremediation of diesel-polluted soil with NTP pretreatment.
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Affiliation(s)
- Jingyi Zhao
- College of Environmental Science and Engineering, Donghua University, Shanghai 201620, China; Shanghai Institute of Pollution Control and Ecological Security, Shanghai 200092, China
| | - Li Cai
- College of Environmental Science and Engineering, Donghua University, Shanghai 201620, China
| | - Ai Zhang
- College of Environmental Science and Engineering, Donghua University, Shanghai 201620, China
| | - Guoqing Li
- College of Environmental Science and Engineering, Donghua University, Shanghai 201620, China
| | - Yinyin Zhang
- College of Environmental Science and Engineering, Donghua University, Shanghai 201620, China
| | - Irina Filatova
- B. I. Stepanov Institute of Physics, National Academy of Sciences of Belarus, 68 Prospekt Nezavisimosti, BY-220072 Minsk, Belarus
| | - Yanan Liu
- College of Environmental Science and Engineering, Donghua University, Shanghai 201620, China; Shanghai Institute of Pollution Control and Ecological Security, Shanghai 200092, China.
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Lassalle J, Hoelen TP, Bireta P, Kong D, Sabadell GP, Staack D. Demonstration of a scalable process for remediation of petroleum-impacted soil using electron beam irradiation. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2024; 342:122893. [PMID: 37952924 DOI: 10.1016/j.envpol.2023.122893] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/09/2023] [Revised: 10/18/2023] [Accepted: 11/05/2023] [Indexed: 11/14/2023]
Abstract
Petroleum-impacted soils pose several hazards and require fast, effective, and versatile remediation techniques. Electron beam irradiation provides a novel means of heating soil and inducing non-equilibrium chemical reactions and has previously been applied to environmental remediation. In this work a scalable process for remediation of petroleum-impacted soils using a 100 kW, 3 MeV industrial electron beam is investigated. The process involves conveying impacted soil through a beam at a controllable rate to achieve a desired dose of approximately 1000 kGy. Reductions to less than 1% Total Petroleum Hydrocarbon (TPH) content from an initial TPH of 3.3% were demonstrated for doses of 710-1370 kGy. These reductions were achieved in in conditions equivalent to 4 m3 per hour, demonstrating the applicability of this technique to remediation sites. TPH reduction appeared to be temperature-dependent but not heavily dependent on dose rate, with reductions of 96% achieved for a dose of 1370 kGy and peak temperature of 540 °C. The performance of the process at high dose rates suggests that it can be incorporated into remediation of sites for which a high rate of material processing is required with a relatively small device footprint.
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Affiliation(s)
- John Lassalle
- Department of Mechanical Engineering, Texas A& M University, College Station, TX, 77843-3123, USA
| | | | - Paul Bireta
- Chevron Energy Technology Company, Houston, TX, USA
| | - Deyuan Kong
- Chevron Energy Technology Company, Houston, TX, USA
| | | | - David Staack
- Department of Mechanical Engineering, Texas A& M University, College Station, TX, 77843-3123, USA.
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Brzeszcz J, Steliga T, Ryszka P, Kaszycki P, Kapusta P. Bacteria degrading both n-alkanes and aromatic hydrocarbons are prevalent in soils. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2024; 31:5668-5683. [PMID: 38127231 PMCID: PMC10799122 DOI: 10.1007/s11356-023-31405-8] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/18/2023] [Accepted: 12/03/2023] [Indexed: 12/23/2023]
Abstract
This study was undertaken to determine the distribution of soil bacteria capable of utilizing both n-alkanes and aromatic hydrocarbons. These microorganisms have not been comprehensively investigated so far. Ten contaminated (4046-43,861 mg of total petroleum hydrocarbons (TPH) kg-1 of dry weight of soil) and five unpolluted (320-2754 mg TPH kg-1 of dry weight of soil) soil samples from temperate, arid, and Alpine soils were subjected to isolation of degraders with extended preferences and shotgun metagenomic sequencing (selected samples). The applied approach allowed to reveal that (a) these bacteria can be isolated from pristine and polluted soils, and (b) the distribution of alkane monooxygenase (alkB) and aromatic ring hydroxylating dioxygenases (ARHDs) encoding genes is not associated with the contamination presence. Some alkB and ARHD genes shared the same taxonomic affiliation; they were most often linked with the Rhodococcus, Pseudomonas, and Mycolicibacterium genera. Moreover, these taxa together with the Paeniglutamicibacter genus constituted the most numerous groups among 132 culturable strains growing in the presence of both n-alkanes and aromatic hydrocarbons. All those results indicate (a) the prevalence of the hydrocarbon degraders with extended preferences and (b) the potential of uncontaminated soil as a source of hydrocarbon degraders applied for bioremediation purposes.
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Affiliation(s)
- Joanna Brzeszcz
- Department of Microbiology, Oil and Gas Institute - National Research Institute, ul. Lubicz 25A, 31-503, Kraków, Poland.
| | - Teresa Steliga
- Department of Production Technology of Reservoir Fluids, Oil and Gas Institute - National Research Institute, ul. Lubicz 25A, 31-503, Kraków, Poland
| | - Przemysław Ryszka
- Institute of Environmental Sciences, Faculty of Biology, Jagiellonian University in Kraków, ul. Gronostajowa 7, 30-387, Kraków, Poland
| | - Paweł Kaszycki
- Department of Plant Biology and Biotechnology, Faculty of Biotechnology and Horticulture, University of Agriculture in Kraków, Al. Mickiewicza 21, 31-425, Kraków, Poland
| | - Piotr Kapusta
- Department of Microbiology, Oil and Gas Institute - National Research Institute, ul. Lubicz 25A, 31-503, Kraków, Poland
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Melekhina EN, Belykh ES, Kanev VA, Taskaeva AA, Tarabukin DV, Zinovyeva AN, Velegzhaninov IO, Rasova EE, Baturina OA, Kabilov MR, Markarova MY. Soil Microbiome in Conditions of Oil Pollution of Subarctic Ecosystems. Microorganisms 2023; 12:80. [PMID: 38257907 PMCID: PMC10820038 DOI: 10.3390/microorganisms12010080] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/24/2023] [Revised: 12/25/2023] [Accepted: 12/27/2023] [Indexed: 01/24/2024] Open
Abstract
The present study aimed to investigate the recovery of soil quality and the bacterial and fungal communities following various recultivation methods in areas contaminated with oil. Oil spills are known to have severe impacts on ecosystems; thus, the restoration of contaminated soils has become a significant challenge nowadays. The study was conducted in the forest-tundra zone of the European North-East, where 39 soil samples from five oil-contaminated sites and reference sites were subjected to metagenomic analyses. The contaminated sites were treated with different biopreparations, and the recovery of soil quality and microbial communities were analyzed. The analysis of bacteria and fungi communities was carried out using 16S rDNA and ITS metabarcoding. It was found that 68% of bacterial OTUs and 64% of fungal OTUs were unique to the reference plot and not registered in any of the recultivated plots. However, the species diversity of recultivated sites was similar, with 50-80% of bacterial OTUs and 44-60% of fungal OTUs being common to all sites. New data obtained through soil metabarcoding confirm our earlier conclusions about the effectiveness of using biopreparations with indigenous oil-oxidizing micro-organisms also with mineral fertilizers, and herbaceous plant seeds for soil remediation. It is possible that the characteristics of microbial communities will be informative in the bioindication of soils reclaimed after oil pollution.
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Affiliation(s)
- Elena N. Melekhina
- Institute of Biology, Komi Scientifc Center, Ural Branch of Russian Academy of Sciences (IB FRC Komi SC UB RAS), Kommunisticheskaya 28, 167982 Syktyvkar, Russia; (E.S.B.); (V.A.K.); (A.A.T.); (D.V.T.); (A.N.Z.); (I.O.V.); (E.E.R.); (M.Y.M.)
| | - Elena S. Belykh
- Institute of Biology, Komi Scientifc Center, Ural Branch of Russian Academy of Sciences (IB FRC Komi SC UB RAS), Kommunisticheskaya 28, 167982 Syktyvkar, Russia; (E.S.B.); (V.A.K.); (A.A.T.); (D.V.T.); (A.N.Z.); (I.O.V.); (E.E.R.); (M.Y.M.)
| | - Vladimir A. Kanev
- Institute of Biology, Komi Scientifc Center, Ural Branch of Russian Academy of Sciences (IB FRC Komi SC UB RAS), Kommunisticheskaya 28, 167982 Syktyvkar, Russia; (E.S.B.); (V.A.K.); (A.A.T.); (D.V.T.); (A.N.Z.); (I.O.V.); (E.E.R.); (M.Y.M.)
| | - Anastasia A. Taskaeva
- Institute of Biology, Komi Scientifc Center, Ural Branch of Russian Academy of Sciences (IB FRC Komi SC UB RAS), Kommunisticheskaya 28, 167982 Syktyvkar, Russia; (E.S.B.); (V.A.K.); (A.A.T.); (D.V.T.); (A.N.Z.); (I.O.V.); (E.E.R.); (M.Y.M.)
| | - Dmitry V. Tarabukin
- Institute of Biology, Komi Scientifc Center, Ural Branch of Russian Academy of Sciences (IB FRC Komi SC UB RAS), Kommunisticheskaya 28, 167982 Syktyvkar, Russia; (E.S.B.); (V.A.K.); (A.A.T.); (D.V.T.); (A.N.Z.); (I.O.V.); (E.E.R.); (M.Y.M.)
| | - Aurika N. Zinovyeva
- Institute of Biology, Komi Scientifc Center, Ural Branch of Russian Academy of Sciences (IB FRC Komi SC UB RAS), Kommunisticheskaya 28, 167982 Syktyvkar, Russia; (E.S.B.); (V.A.K.); (A.A.T.); (D.V.T.); (A.N.Z.); (I.O.V.); (E.E.R.); (M.Y.M.)
| | - Ilya O. Velegzhaninov
- Institute of Biology, Komi Scientifc Center, Ural Branch of Russian Academy of Sciences (IB FRC Komi SC UB RAS), Kommunisticheskaya 28, 167982 Syktyvkar, Russia; (E.S.B.); (V.A.K.); (A.A.T.); (D.V.T.); (A.N.Z.); (I.O.V.); (E.E.R.); (M.Y.M.)
| | - Elena E. Rasova
- Institute of Biology, Komi Scientifc Center, Ural Branch of Russian Academy of Sciences (IB FRC Komi SC UB RAS), Kommunisticheskaya 28, 167982 Syktyvkar, Russia; (E.S.B.); (V.A.K.); (A.A.T.); (D.V.T.); (A.N.Z.); (I.O.V.); (E.E.R.); (M.Y.M.)
| | - Olga A. Baturina
- Institute of Chemical Biology and Fundamental Medicine, Siberian Branch of the Russian Academy of Sciences (ICBFM SB RAS), Lavrentieva 8, 630090 Novosibirsk, Russia; (O.A.B.); (M.R.K.)
| | - Marsel R. Kabilov
- Institute of Chemical Biology and Fundamental Medicine, Siberian Branch of the Russian Academy of Sciences (ICBFM SB RAS), Lavrentieva 8, 630090 Novosibirsk, Russia; (O.A.B.); (M.R.K.)
| | - Maria Yu. Markarova
- Institute of Biology, Komi Scientifc Center, Ural Branch of Russian Academy of Sciences (IB FRC Komi SC UB RAS), Kommunisticheskaya 28, 167982 Syktyvkar, Russia; (E.S.B.); (V.A.K.); (A.A.T.); (D.V.T.); (A.N.Z.); (I.O.V.); (E.E.R.); (M.Y.M.)
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12
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Jiao S, Hou X, Zhao G, Feng Y, Zhang S, Zhang H, Liu J, Jiang G. Migration of polycyclic aromatic hydrocarbons in the rhizosphere micro-interface of soil-ryegrass (Lolium perenne L.) system. THE SCIENCE OF THE TOTAL ENVIRONMENT 2023; 903:166299. [PMID: 37586525 DOI: 10.1016/j.scitotenv.2023.166299] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/05/2023] [Revised: 07/28/2023] [Accepted: 08/12/2023] [Indexed: 08/18/2023]
Abstract
The unclear multi-media and multi-interface processes of polycyclic aromatic hydrocarbons (PAHs) in environments have drawn great concern. Here, 16 controlled PAHs were selected to reveal the differences in the bioavailability and migration of congeners in soil-ryegrass exposure system. The presence of ryegrass in the exposure groups (with newly introduced PAHs) resulted in a decrease in PAHs dissipation (31.3 %) from soil compared to the unplanted groups (43.2 %). The presence of ryegrass inhibited the soil-air exchange process, which has not been widely reported. PAH congeners with less benzene rings (molecular weight < B[a]A) had consistent bioavailability before and after long-term aging, the competition between adsorption/absorption to plants and soil was not strong (RCFs < 3.5), and their migration in the rhizosphere rapidly reached equilibrium. PAH congeners with more benzene rings (molecular weight ≥ B[a]A) adsorbed to soil particles and significantly decreased their bioavailability after long-term aging. Their concentrations in the rhizosphere were stable and lower than bulk soil, revealing their slow equilibrium process in soil. In addition, PAHs with larger molecular weight and KOW showed less migration at the rhizosphere micro-interface. The migration behavior of congeners with close KOW depended on their molecular structure. Congeners with non-symmetric K-region or L-region showed greater migration ability in the rhizosphere. These findings revealed the fate of PAHs, especially different PAH congeners, in the rhizosphere interfaces for the first time, and explored the molecular mechanisms that affect their rhizosphere behaviors, improving the understanding and knowledge of PAHs in the microenvironment, providing new data on evaluating and controlling the environmental risks of PAHs.
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Affiliation(s)
- Suning Jiao
- State Key Laboratory of Environmental Chemistry and Ecotoxicology, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing 100085, China; College of Resources and Environment, University of Chinese Academy of Sciences, Beijing 100049, China
| | - Xingwang Hou
- State Key Laboratory of Environmental Chemistry and Ecotoxicology, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing 100085, China; College of Resources and Environment, University of Chinese Academy of Sciences, Beijing 100049, China
| | - Ganghui Zhao
- State Key Laboratory of Environmental Chemistry and Ecotoxicology, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing 100085, China; School of Environment, Hangzhou Institute for Advanced Study, UCAS, Hangzhou 310000, China
| | - Yue Feng
- State Key Laboratory of Environmental Chemistry and Ecotoxicology, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing 100085, China; School of Environment, Hangzhou Institute for Advanced Study, UCAS, Hangzhou 310000, China
| | - Shuyan Zhang
- State Key Laboratory of Environmental Chemistry and Ecotoxicology, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing 100085, China; College of Resources and Environment, University of Chinese Academy of Sciences, Beijing 100049, China
| | - Hongrui Zhang
- State Key Laboratory of Environmental Chemistry and Ecotoxicology, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing 100085, China; College of Resources and Environment, University of Chinese Academy of Sciences, Beijing 100049, China
| | - Jiyan Liu
- State Key Laboratory of Environmental Chemistry and Ecotoxicology, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing 100085, China; College of Resources and Environment, University of Chinese Academy of Sciences, Beijing 100049, China; School of Environment, Hangzhou Institute for Advanced Study, UCAS, Hangzhou 310000, China.
| | - Guibin Jiang
- State Key Laboratory of Environmental Chemistry and Ecotoxicology, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing 100085, China; College of Resources and Environment, University of Chinese Academy of Sciences, Beijing 100049, China; School of Environment, Hangzhou Institute for Advanced Study, UCAS, Hangzhou 310000, China
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13
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Zhang S, Zhang M, Han F, Liu Z, Zhao C, Lei J, Zhou W. Enhanced degradation of petroleum in saline soil by nitrogen stimulation and halophilic emulsifying bacteria Bacillus sp. Z-13. JOURNAL OF HAZARDOUS MATERIALS 2023; 459:132102. [PMID: 37531758 DOI: 10.1016/j.jhazmat.2023.132102] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/06/2023] [Revised: 06/30/2023] [Accepted: 07/18/2023] [Indexed: 08/04/2023]
Abstract
Remediation of petroleum-contaminated soil is a widely concerned challenge. As an ecofriendly method, the performance improvement of indigenous microbial degradation is facing the bottleneck. In this study, a strain with high efficiency of petroleum degradation was isolated from the petroleum-contaminated soil and identified and named as Bacillus sp. Z-13. The strain showed the ability to produce lipopeptide surfactant which could improve 66% more petroleum hydrocarbons eluted. Strain Z-13 and its biosurfactant exhibited broad environmental adaptability to salinity (0-8%), pH (6-9) and temperature (15-45 °C). With the addition of strain Z-13 and the stimulation of NH4Cl, up to 59% of the petroleum in the contaminated soil was removed at the carbon to nitrogen ratio of 10. Microbial community analysis showed that petroleum-degrading bacteria, represented by Bacillus, became the dominant species at genus level and played an important role in the remediation. Additionally, ammonium stimulation facilitated both pathways of ammonium assimilation and nitrification in native microorganisms to achieve efficient degradation of petroleum hydrocarbons. This study could provide a promising approach for stable, environmental-friendly and efficient remediation of petroleum-contaminated soil.
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Affiliation(s)
- Shuhui Zhang
- School of Civil Engineering, Shandong University, 250061 Jinan, China
| | - Mengru Zhang
- School of Civil Engineering, Shandong University, 250061 Jinan, China
| | - Fei Han
- School of Environment Science and Engineering, Shandong University, 250100 Jinan, China
| | - Zhe Liu
- School of Environment Science and Engineering, Shandong University, 250100 Jinan, China
| | - Chuanfu Zhao
- School of Civil Engineering, Shandong University, 250061 Jinan, China
| | - Jianhua Lei
- School of Environment Science and Engineering, Shandong University, 250100 Jinan, China
| | - Weizhi Zhou
- School of Civil Engineering, Shandong University, 250061 Jinan, China.
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14
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Barathi S, J G, Rathinasamy G, Sabapathi N, Aruljothi KN, Lee J, Kandasamy S. Recent trends in polycyclic aromatic hydrocarbons pollution distribution and counteracting bio-remediation strategies. CHEMOSPHERE 2023; 337:139396. [PMID: 37406936 DOI: 10.1016/j.chemosphere.2023.139396] [Citation(s) in RCA: 10] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/28/2023] [Revised: 06/21/2023] [Accepted: 06/30/2023] [Indexed: 07/07/2023]
Abstract
Polycyclic aromatic hydrocarbons (PAHs) are distributed worldwide due to long-term anthropogenic pollution sources. PAHs are recalcitrant and highly persistent in the environment due to their inherent properties, such as heterocyclic aromatic ring structures, thermostability, and hydrophobicity. They are highly toxic, carcinogenic, immunotoxic, teratogenic, and mutagenic to various life systems. This review focuses on the unique data of PAH sources, exposure routes, detection techniques, and harmful effects on the environment and human health. This review provides a comprehensive and systematic compilation of eco-friendly biological treatment solutions for PAH remediation, such as microbial remediation approaches utilizing microbial cultures. In situ and Ex situ bioremediation of PAH methods, including composting land farming, biopiles, bioreactors bioaugmentation, and phytoremediation processes, are discussed in detail, as is a summary of the factors affecting and limiting PAH bioremediation. This review provides an overview of emerging technologies that use multi-process combinatorial treatment approaches and answers to generating value-added by-products during PAH remediation.
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Affiliation(s)
- Selvaraj Barathi
- School of Chemical Engineering, Yeungnam University, Gyeongsan, 38541, Republic of Korea.
| | - Gitanjali J
- School of Information Technology and Engineering, Vellore Institute of Technology, Vellore, 63014, Tamil Nadu, India
| | - Gandhimathi Rathinasamy
- Department of Pharmaceutical Chemistry and Analysis, School of Pharmaceutical Sciences, Vels Institute of Science, Technology & Advanced Studies (VISTAS), Pallavaram, Chennai, 600117, Tamilnadu, India
| | - Nadana Sabapathi
- Centre of Translational Research, Shenzhen Bay Laboratory, Guangming District, Shenzhen, 518107, China
| | - K N Aruljothi
- Department of Genetic Engineering, SRM Institute of Science and Technology, Kattankulathur, Chennai, 603 203, India
| | - Jintae Lee
- School of Chemical Engineering, Yeungnam University, Gyeongsan, 38541, Republic of Korea
| | - Sabariswaran Kandasamy
- Department of Biotechnology, PSGR Krishnammal College for Women, Peelamedu, Coimbatore, 641004, India.
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15
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Feng X, Zhang B. Applications of bubble curtains in marine oil spill containment: Hydrodynamic characteristics, applications, and future perspectives. MARINE POLLUTION BULLETIN 2023; 194:115371. [PMID: 37591051 DOI: 10.1016/j.marpolbul.2023.115371] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/29/2023] [Revised: 07/29/2023] [Accepted: 07/31/2023] [Indexed: 08/19/2023]
Abstract
Although the marine oil spill pollution issue does not bring us to flock in droves as the new emerging oceanic techniques like wave energy converters, remote operated vehicle (ROV), blue ammonia and green hydrogen, the huge pollution risks of the marine oil spills caused by man-made intentional discharge, old equipment, accidental leakage, war and other aspects should arouse our sufficient attention and concern. As the primary countermeasure of emergency response to a marine oil spill, rapid & efficient oil containment is crucial to limit the pollution scope and the subsequent recovery and treatment. Here, we summarized the existing investigations on oil-spill containment with a marked emphasis on the applications of bubble curtains and their working mechanisms. The critical research progress and trends about the remediation techniques and the application of bubble curtains in marine environments were briefly introduced. The article thoroughly analyzed the basic working mechanism of the bubble curtains in oil spill containment, the technical difficulties of the existing methods, the potential application prospects of coupling with the traditional oil containment booms and the critical scientific problems to be studied in the future. Regarding the issues involving insufficient oil retention performance and inconvenient deployment of the existing traditional oil boom under complex and variable sea conditions, the performance and structural optimization of bubble curtain enhanced oil containment boom will get the top priority in developing the next-generation oil containment techniques.
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Affiliation(s)
- Xing Feng
- Department of Marine Engineering, Dalian Maritime University, Dalian, PR China.
| | - Baiyu Zhang
- Northern Region Persistent Organic Pollutant Control (NRPOP) Laboratory, Faculty of Engineering and Applied Science, Memorial University, St. John's, Canada
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16
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Alves DAS, Botelho Junior AB, Espinosa DCR, Tenório JAS, Baltazar MDPG. Copper and zinc adsorption from bacterial biomass - possibility of low-cost industrial wastewater treatment. ENVIRONMENTAL TECHNOLOGY 2023; 44:2441-2450. [PMID: 35044281 DOI: 10.1080/09593330.2022.2031312] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/27/2021] [Accepted: 01/10/2022] [Indexed: 06/08/2023]
Abstract
The increasing interest of all stakeholders to achieve environmental protection with socioeconomic development puts pressure on industrial processes for less negative impact on the environment. The use of biomass for wastewater treatment has increased due to its low costs and technical feasibility. The present study aimed the use of biomass from a waste of known polluted area for the adsorption of Zn and Cu in a fixed-bed reactor. Samples were collected in Cubatão (Brazil) and cultivated in LB medium. Resulting cultivable bacterial communities were identified as Enterococcus faecalis and Pseudomonas aeruginosa. Adsorption experiments were performed varying the metallic ion concentration and the amount of biomass. Adsorption experiments showed efficiency rates up to 90%. As the concentration of metallic ions increased, the adsorption efficiency decreased, indicating that the active sites were saturated. Activated charcoal demonstrated lower adsorption rates than biomass. Elution process showed that HNO3 had better efficiency than HCl. Zn adsorption fitted better for Lineweaver-Burk model (Qmax = 200 mg/g of biomass), while Cu adsorption fitted better for Langmuir model (Qmax = 164 mg/g of biomass). Results here demonstrated that the adsorption of Zn and Cu simulating an industrial wastewater by the biomass from a contaminated area is technically feasible.
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17
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Mindorff LM, Mahmoudi N, Hepditch SLJ, Langlois VS, Alam S, Martel R, Ahad JME. Isotopic and microbial evidence for biodegradation of diluted bitumen in the unsaturated zone. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2023; 322:121170. [PMID: 36736816 DOI: 10.1016/j.envpol.2023.121170] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/24/2022] [Revised: 01/23/2023] [Accepted: 01/28/2023] [Indexed: 06/18/2023]
Abstract
The oil sands region in Western Canada is one of the world's largest proven oil reserves. To facilitate pipeline transport, highly viscous oil sands bitumen is blended with lighter hydrocarbon fractions to produce diluted bitumen (dilbit). Anticipated increases in dilbit production and transport raise the risk of inland spills. To understand the behaviour of dilbit in the unsaturated or vadose zone following a surface spill, we ran parallel dilbit and conventional heavy crude exposures, along with an untreated control, using large soil-filled columns over 104 days. Phospholipid fatty acids (PLFAs), biomarkers for the active microbial population, were extracted from column soil cores. Stable carbon isotope contents (δ13C) of individual PLFAs and radiocarbon contents (Δ14C) of bulk PLFAs were characterized over the course of the experiment. The Δ14CPLFA values in soils impacted by dilbit (-221.1 to -54.7‰) and conventional heavy crude (-259.4 to -97.9‰) indicated similar levels of microbial uptake of fossil carbon. In contrast, Δ14CPLFA values in the control column (-46.1 to +53.7‰) reflected assimilation of more recently fixed organic carbon. Sequencing of 16S ribosomal RNA genes extracted from soil cores revealed a significant increase in the relative abundance of Polaromonas, a known hydrocarbon-degrader, following exposure to both types of oil. This study demonstrates that in the first several months following a surface spill, dilbit has a similar potential for biodegradation by a native shallow subsurface microbial community as conventional heavy crude oil.
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Affiliation(s)
- Leah M Mindorff
- Department of Earth and Planetary Sciences, McGill University, Montréal, QC, H3A 0E8, Canada; Geological Survey of Canada, Natural Resources Canada, Québec, QC, G1K 9A9, Canada
| | - Nagissa Mahmoudi
- Department of Earth and Planetary Sciences, McGill University, Montréal, QC, H3A 0E8, Canada
| | - Scott L J Hepditch
- Institut National de la Recherche Scientifique (INRS), Centre Eau Terre Environnement, Québec, QC, G1K 9A9, Canada
| | - Valerie S Langlois
- Institut National de la Recherche Scientifique (INRS), Centre Eau Terre Environnement, Québec, QC, G1K 9A9, Canada
| | - Samrat Alam
- Geological Survey of Canada, Natural Resources Canada, Québec, QC, G1K 9A9, Canada
| | - Richard Martel
- Institut National de la Recherche Scientifique (INRS), Centre Eau Terre Environnement, Québec, QC, G1K 9A9, Canada
| | - Jason M E Ahad
- Geological Survey of Canada, Natural Resources Canada, Québec, QC, G1K 9A9, Canada.
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18
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Anand U, Dey S, Bontempi E, Ducoli S, Vethaak AD, Dey A, Federici S. Biotechnological methods to remove microplastics: a review. ENVIRONMENTAL CHEMISTRY LETTERS 2023; 21:1787-1810. [PMID: 36785620 PMCID: PMC9907217 DOI: 10.1007/s10311-022-01552-4] [Citation(s) in RCA: 25] [Impact Index Per Article: 25.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/06/2022] [Accepted: 11/25/2022] [Indexed: 05/14/2023]
Abstract
Microplastics pollution is major threat to ecosystems and is impacting abiotic and biotic components. Microplastics are diverse and highly complex contaminants that transport other contaminants and microbes. Current methods to remove microplastics include biodegradation, incineration, landfilling, and recycling. Here we review microplastics with focus on sources, toxicity, and biodegradation. We discuss the role of algae, fungi, bacteria in the biodegradation, and we present biotechnological methods to enhance degradation, e.g., gene editing tools and bioinformatics.
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Affiliation(s)
- Uttpal Anand
- Zuckerberg Institute for Water Research, Jacob Blaustein Institutes for Desert Research, Ben-Gurion University of the Negev, 8499000 Midreshet Ben Gurion, Israel
| | - Satarupa Dey
- Department of Botany, Shyampur Siddheswari Mahavidyalaya, University of Calcutta, Ajodhya, Shyampur, Howrah, 711312 India
| | - Elza Bontempi
- Department of Mechanical and Industrial Engineering, INSTM Unit of Brescia, University of Brescia, Via Branze 38, 25123 Brescia, Italy
| | - Serena Ducoli
- Department of Mechanical and Industrial Engineering, INSTM Unit of Brescia, University of Brescia, Via Branze 38, 25123 Brescia, Italy
| | - A. Dick Vethaak
- Department of Environment and Health, Vrije Universiteit Amsterdam, Amsterdam, Netherlands
- Institute for Risk Assessment Sciences, Department of Population Health Sciences, Faculty of Veterinary Medicine, Utrecht University, Utrecht, Netherlands
| | - Abhijit Dey
- Department of Life Sciences, Presidency University, 86/1 College Street, Kolkata, West Bengal 700073 India
| | - Stefania Federici
- Department of Mechanical and Industrial Engineering, INSTM Unit of Brescia, University of Brescia, Via Branze 38, 25123 Brescia, Italy
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19
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Davoodi SM, Miri S, Brar SK, Knystautas E, Martel R. Simulation of novel jellyfish type of process for bioremediation application. CHEMOSPHERE 2023; 313:137376. [PMID: 36436585 DOI: 10.1016/j.chemosphere.2022.137376] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/24/2022] [Revised: 10/31/2022] [Accepted: 11/22/2022] [Indexed: 06/16/2023]
Abstract
A bioinspired device was fabricated as a sustainable remedial method and its performance as a membrane-enzyme reactor with cyclic ultrafiltration was investigated. The body of the jellyfish-like device was composed of two parts: 1) Jellyfish arms: Mono and co-axial electrospinning have been utilized to synthesize the flexible parts (e.g., multilayer membrane PS-PVDF/PAN/PS-PVDF) used for immobilization of aliphatic degrading enzymes, and 2) Jellyfish tentacles: Hollow fiber membranes were selected for physical immobilization of polycyclic aromatic hydrocarbon (PAH) degrading enzymes. To study the behavior of the membrane/enzyme reactor, the hollow fiber enzyme reactor with pulsation was operated by recycling an enzyme solution to assess ultrafiltration efficiency. A mathematical model was suggested to describe the experimental data obtained in this study to predict the effectiveness of the reactor for PAH removal. When testing the performance of the jellyfish-like device, those equipped with nanofibers with an oil sorption capacity of (10. ±0.7gdilbit/gfiber) were more effective at removing oil particles before they touched the hollow fiber membrane surface. Moreover, the reaction rate measured in a free soluble enzyme and a recirculating immobilized enzyme solution exhibited a slight difference in the kinetic parameter, Km (0.03 and 0.021 mM) due to the internal diffusional resistance. Based on biodegradation studies, a synergistic effect between membrane adsorption, enzymatic degradation, and ultrafiltration was proposed for the removal of anthracene from the column of water.
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Affiliation(s)
- Seyyed Mohammadreza Davoodi
- Department of Civil Engineering, Lassonde School of Engineering, York University, North York, Toronto, Ontario, M3J 1P3, Canada
| | - Saba Miri
- Department of Civil Engineering, Lassonde School of Engineering, York University, North York, Toronto, Ontario, M3J 1P3, Canada
| | - Satinder Kaur Brar
- Department of Civil Engineering, Lassonde School of Engineering, York University, North York, Toronto, Ontario, M3J 1P3, Canada.
| | - Emile Knystautas
- Département de Physique, de Génie Physique et D'optique, Université Laval, Québec, G1V 0A6, Canada
| | - Richard Martel
- INRS-ETE, Université Du Québec, 490, Rue de La Couronne, Québec, G1K 9A9, Canada
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20
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Wu M, Liu Z, Gao H, Gao J, Xu Y, Ou Y. Assessment of bioremediation potential of petroleum-contaminated soils from the shanbei oilfield of China revealed by qPCR and high throughput sequencing. CHEMOSPHERE 2022; 308:136446. [PMID: 36113659 DOI: 10.1016/j.chemosphere.2022.136446] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/18/2022] [Revised: 07/28/2022] [Accepted: 09/10/2022] [Indexed: 06/15/2023]
Abstract
With the crude oil exploration activities in the Shanbei oilfield of China, the risk of soil contamination with crude oil spills has become a major concern. This study aimed at assessing the bioremediation potential of the petroleum polluted soils by investigating the expression of key functional genes decoding alkane and aromatic component degradation using an array of primers and real-time quantitative PCR (qPCR), and the functional microbiomes were determined using a combination of substrate-induced metabolic responses and high throughput sequencing. The results showed that the species that were more inclined to degrade aliphatic fraction of crude oil included Acinetobacter, Stenotrophomonas, Neorhizobium and Olivebacter. And Pseudomonas genus was a highly specific keystone species with the potential to degrade PAH fraction. Both aliphatic and PAH-degrading genes were upregulated when the soil petroleum contents were less than 10,000 mg/kg but downregulated when the oil contents were over 10,000 mg/kg. Bioremediation potential could be feasible for medium pollution with petroleum contents of less than 10,000 mg/kg. Optimization of the niche of Acinetobacter, Stenotrophomonas, Pseudomonas, Neorhizobium and Olivebacter species was beneficial to the biodegradation of refractory hydrocarbon components in the Shanbei plateau oilfield.
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Affiliation(s)
- Manli Wu
- Shaanxi Key Laboratory of Environmental Engineering, Xi'an University of Architecture and Technology, Xi'an, 710055, People's Republic of China; Key Laboratory of Northwest Water Resource, Environment and Ecology, MOE, Xi'an University of Architecture and Technology, Xi'an, 710055, People's Republic of China; College of Environmental and Engineering, Xi'an University of Architecture and Technology, Xi'an, 710055, People's Republic of China.
| | - Zeliang Liu
- Shaanxi Key Laboratory of Environmental Engineering, Xi'an University of Architecture and Technology, Xi'an, 710055, People's Republic of China; Key Laboratory of Northwest Water Resource, Environment and Ecology, MOE, Xi'an University of Architecture and Technology, Xi'an, 710055, People's Republic of China; College of Environmental and Engineering, Xi'an University of Architecture and Technology, Xi'an, 710055, People's Republic of China; Key Laboratory of Soil Environment and Pollution Remediation, Institute of Soil Science, Chinese Academy of Sciences, Nanjing, 210008, China
| | - Huan Gao
- Shaanxi Key Laboratory of Environmental Engineering, Xi'an University of Architecture and Technology, Xi'an, 710055, People's Republic of China; Key Laboratory of Northwest Water Resource, Environment and Ecology, MOE, Xi'an University of Architecture and Technology, Xi'an, 710055, People's Republic of China; College of Environmental and Engineering, Xi'an University of Architecture and Technology, Xi'an, 710055, People's Republic of China
| | - Jinghua Gao
- Shaanxi Key Laboratory of Environmental Engineering, Xi'an University of Architecture and Technology, Xi'an, 710055, People's Republic of China; Key Laboratory of Northwest Water Resource, Environment and Ecology, MOE, Xi'an University of Architecture and Technology, Xi'an, 710055, People's Republic of China; College of Environmental and Engineering, Xi'an University of Architecture and Technology, Xi'an, 710055, People's Republic of China
| | - Yinrui Xu
- Shaanxi Key Laboratory of Environmental Engineering, Xi'an University of Architecture and Technology, Xi'an, 710055, People's Republic of China; Key Laboratory of Northwest Water Resource, Environment and Ecology, MOE, Xi'an University of Architecture and Technology, Xi'an, 710055, People's Republic of China; College of Environmental and Engineering, Xi'an University of Architecture and Technology, Xi'an, 710055, People's Republic of China
| | - Yawen Ou
- Shaanxi Key Laboratory of Environmental Engineering, Xi'an University of Architecture and Technology, Xi'an, 710055, People's Republic of China; Key Laboratory of Northwest Water Resource, Environment and Ecology, MOE, Xi'an University of Architecture and Technology, Xi'an, 710055, People's Republic of China; College of Environmental and Engineering, Xi'an University of Architecture and Technology, Xi'an, 710055, People's Republic of China
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Dan H, Ji K, Gao Y, Yin W, Gao B, Yue Q. Fabrication of superhydrophobic Enteromorpha-derived carbon aerogels via NH 4H 2PO 4 modification for multi-behavioral oil/water separation. THE SCIENCE OF THE TOTAL ENVIRONMENT 2022; 837:155869. [PMID: 35561933 DOI: 10.1016/j.scitotenv.2022.155869] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/25/2022] [Revised: 05/05/2022] [Accepted: 05/07/2022] [Indexed: 06/15/2023]
Abstract
Hydrophobic and oleophilic biomass-based block materials are considered to be highly promising candidates used for oil/water separation. However, the crucial hydrophobic modification process often involves various toxic and hazardous organic substances or requires high energy inputs. Inspired by the flame retardant principle of phosphorus-containing flame retardants, herein, an Enteromorpha-derived carbon (ADP-EP) aerogel with a water contact angle of 144.2° was prepared by successive freeze-shaping, freeze-drying and low-temperature carbonization treatment (300 °C), using NH4H2PO4 (ADP) as a modifier. The results demonstrated that the introduction of NH4H2PO4 could largely facilitate the removal of oxygenated groups from the pristine EP aerogels and enhance their surface roughness, thereby achieving surface hydrophobic modification. Featuring intrinsic low density, rich porosity and strong lipophilicity, the as-fabricated ADP-EP aerogels exhibited exceptional performance in both oil spill adsorption (~140 g/g) and water-in-oil emulsion separation. Moreover, the good reusability for oil uptake was also realized thanks to its robust mechanical compressibility and thermal stability. This work provides a facile, economical and eco-friendly route to obtain a desirable hydrophobic/oleophilic surface.
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Affiliation(s)
- Hongbing Dan
- Shandong Provincial Key Laboratory of Water Pollution Control and Resource Reuse, School of Environmental Science and Engineering, Shandong University, Jinan 250100, China
| | - Kaidi Ji
- Shandong Provincial Key Laboratory of Water Pollution Control and Resource Reuse, School of Environmental Science and Engineering, Shandong University, Jinan 250100, China
| | - Yue Gao
- Shandong Provincial Key Laboratory of Water Pollution Control and Resource Reuse, School of Environmental Science and Engineering, Shandong University, Jinan 250100, China.
| | - Weiyan Yin
- Hubei Key Laboratory of Biomass Fibers and Eco-dyeing & Finishing, School of Chemistry and Chemical Engineering, Wuhan Textile University, Wuhan 430073, China
| | - Baoyu Gao
- Shandong Provincial Key Laboratory of Water Pollution Control and Resource Reuse, School of Environmental Science and Engineering, Shandong University, Jinan 250100, China
| | - Qinyan Yue
- Shandong Provincial Key Laboratory of Water Pollution Control and Resource Reuse, School of Environmental Science and Engineering, Shandong University, Jinan 250100, China
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Bala S, Garg D, Thirumalesh BV, Sharma M, Sridhar K, Inbaraj BS, Tripathi M. Recent Strategies for Bioremediation of Emerging Pollutants: A Review for a Green and Sustainable Environment. TOXICS 2022; 10:toxics10080484. [PMID: 36006163 PMCID: PMC9413587 DOI: 10.3390/toxics10080484] [Citation(s) in RCA: 71] [Impact Index Per Article: 35.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/17/2022] [Revised: 08/11/2022] [Accepted: 08/17/2022] [Indexed: 05/04/2023]
Abstract
Environmental pollution brought on by xenobiotics and other related recalcitrant compounds have recently been identified as a major risk to both human health and the natural environment. Due to their toxicity and non-biodegradability, a wide range of pollutants, such as heavy metals, polychlorinated biphenyls, plastics, and various agrochemicals are present in the environment. Bioremediation is an effective cleaning technique for removing toxic waste from polluted environments that is gaining popularity. Various microorganisms, including aerobes and anaerobes, are used in bioremediation to treat contaminated sites. Microorganisms play a major role in bioremediation, given that it is a process in which hazardous wastes and pollutants are eliminated, degraded, detoxified, and immobilized. Pollutants are degraded and converted to less toxic forms, which is a primary goal of bioremediation. Ex situ or in situ bioremediation can be used, depending on a variety of factors, such as cost, pollutant types, and concentration. As a result, a suitable bioremediation method has been chosen. This review focuses on the most recent developments in bioremediation techniques, how microorganisms break down different pollutants, and what the future holds for bioremediation in order to reduce the amount of pollution in the world.
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Affiliation(s)
- Saroj Bala
- Department of Microbiology, Punjab Agriculture University, Ludhiana 141001, India
| | - Diksha Garg
- Department of Microbiology, Punjab Agriculture University, Ludhiana 141001, India
| | - Banjagere Veerabhadrappa Thirumalesh
- Microbial Processes and Technology Division, CSIR-National Institute for Interdisciplinary Science and Technology, Thiruvananthapuram 695019, India
| | - Minaxi Sharma
- Laboratoire de Chimie Verte et Produits Biobasés, Département Agro Bioscience et Chimie, Haute Ecole Provinciale de Hainaut-Condorcet, 11 Rue de la Sucrerie, 7800 Ath, Belgium
| | - Kandi Sridhar
- UMR1253, Science et Technologie du Lait et de l’œuf, INRAE, L’Institut Agro Rennes-Angers, 65 Rue de Saint Brieuc, F-35042 Rennes, France
| | - Baskaran Stephen Inbaraj
- Department of Food Science, Fu Jen Catholic University, New Taipei City 24205, Taiwan
- Correspondence: (B.S.I.); (M.T.)
| | - Manikant Tripathi
- Biotechnology Program, Dr. Rammanohar Lohia Avadh University, Ayodhya 224001, India
- Correspondence: (B.S.I.); (M.T.)
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Cruz Viggi C, Tucci M, Resitano M, Crognale S, Di Franca ML, Rossetti S, Aulenta F. Coupling of bioelectrochemical toluene oxidation and trichloroethene reductive dechlorination for single-stage treatment of groundwater containing multiple contaminants. ENVIRONMENTAL SCIENCE AND ECOTECHNOLOGY 2022; 11:100171. [PMID: 36158759 PMCID: PMC9488093 DOI: 10.1016/j.ese.2022.100171] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/02/2022] [Revised: 03/29/2022] [Accepted: 03/29/2022] [Indexed: 05/12/2023]
Abstract
Bioremediation of groundwater contaminated by a mixture of aromatic hydrocarbons and chlorinated solvents is typically challenged because these contaminants are degraded via distinctive oxidative and reductive pathways, thus requiring different amendments and redox conditions. Here, we provided the proof-of-concept of a single-stage treatment of synthetic groundwater containing toluene and trichloroethene (TCE) in a tubular bioelectrochemical reactor, known as a "bioelectric well". Toluene was degraded by a microbial bioanode (up to 150 μmol L-1 d-1) with a polarized graphite anode (+0.2 V vs. SHE) serving as the terminal electron acceptor. The electric current deriving from microbially-driven toluene oxidation resulted in (abiotic) hydrogen production (at a stainless-steel cathode), which sustained the reductive dechlorination of TCE to less-chlorinated intermediates (i.e., cis-DCE, VC, and ETH), at a maximum rate of 500 μeq L-1 d-1, in the bulk of the reactor. A phylogenetic and functional gene-based analysis of the "bioelectric well" confirmed the establishment of a microbiome harboring the metabolic potential for anaerobic toluene oxidation and TCE reductive dechlorination. However, Toluene degradation and current generation were found to be rate-limited by external mass transport phenomena, thus indicating the existing potential for further process optimization.
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Tao Z, Liu C, He Q, Chang H, Ma J. Detection and treatment of organic matters in hydraulic fracturing wastewater from shale gas extraction: A critical review. THE SCIENCE OF THE TOTAL ENVIRONMENT 2022; 824:153887. [PMID: 35181355 DOI: 10.1016/j.scitotenv.2022.153887] [Citation(s) in RCA: 11] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/03/2021] [Revised: 01/28/2022] [Accepted: 02/11/2022] [Indexed: 06/14/2023]
Abstract
Although shale gas has shown promising potential to alleviate energy crisis as a clean energy resource, more attention has been paid to the harmful environmental impacts during exploitation. It is a critical issue for the management of shale gas wastewater (SGW), especially the organic compounds. This review focuses on analytical methods and corresponding treatment technologies targeting organic matters in SGW. Firstly, detailed information about specific shale-derived organics and related organic compounds in SGW were overviewed. Secondly, the state-of-the art analytical methods for detecting organics in SGW were summarized. The gas chromatography paired with mass spectrometry was the most commonly used technique. Thirdly, relevant treatment technologies for SGW organic matters were systematically explored. Forward osmosis and membrane distillation ranked the top two most frequently used treatment processes. Moreover, quantitative analyses on the removal of general and single organic compounds by treatment technologies were conducted. Finally, challenges for the analytical methods and treatment technologies of organic matters in SGW were addressed. The lack of effective trace organic detection techniques and high cost of treatment technologies are the urgent problems to be solved. Advances in the extraction, detection, identification and disposal of trace organic matters are critical to address the issues.
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Affiliation(s)
- Zhen Tao
- Key Laboratory of Eco-environments in Three Gorges Reservoir Region, Ministry of Education, College of Environment and Ecology, Chongqing University, Chongqing 400044, China
| | - Caihong Liu
- Key Laboratory of Eco-environments in Three Gorges Reservoir Region, Ministry of Education, College of Environment and Ecology, Chongqing University, Chongqing 400044, China.
| | - Qiang He
- Key Laboratory of Eco-environments in Three Gorges Reservoir Region, Ministry of Education, College of Environment and Ecology, Chongqing University, Chongqing 400044, China
| | - Haiqing Chang
- MOE Key Laboratory of Deep Earth Science and Engineering, College of Architecture and Environment, Sichuan University, Chengdu 610065, PR China.
| | - Jun Ma
- State Key Laboratory of Urban Water Resource and Environment, Harbin Institute of Technology, Harbin, Heilongjiang 150090, China
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25
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Wu Y, Liu X, Dong Q, Xiao M, Li B, Topalović O, Tao Q, Tang X, Huang R, Chen G, Li H, Chen Y, Feng Y, Wang C. Remediation of petroleum hydrocarbons-contaminated soil: Analysis based on Chinese patents. CHEMOSPHERE 2022; 297:134173. [PMID: 35276108 DOI: 10.1016/j.chemosphere.2022.134173] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/08/2021] [Revised: 02/21/2022] [Accepted: 02/27/2022] [Indexed: 06/14/2023]
Abstract
Increasing soil petroleum hydrocarbons (PHs) pollution have caused world-wide concerns. The removal of PHs from soils mainly involves physical, chemical, biological processes and their combinations. To date, most reviews in this field based on research articles, but limited papers focused on the integration of remediation technologies from the perspective of patents. In this study, 20-years Chinese patents related to the remediation of soil PHs were comprehensively analyzed. It showed an increasing number of patent applications and the patents' quantity were positively correlated with Chinese GDP over the years, suggesting the more the economy developed the more environmental problems and corresponding solutions emerged. In addition, chemical technologies were mostly used in a combination to achieve faster and better effects, while the physical technologies were often used alone due to high costs. In all PHs remediation techniques, bacteria-based bioremediation was the most used from 2000 to 2019. Bacillus spp. and Pseudomonas spp. were the most used bacteria for PHs treatment because these taxa were widely harboring functions such as biosurfactant production and hydrocarbon degradation. The future research on joint technologies combining microbial and physicochemical ones for better remediation effect and application are highly encouraged.
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Affiliation(s)
- Yingjie Wu
- College of Resources, Sichuan Agricultural University, Chengdu, 611130, China
| | - Xipeng Liu
- Microbial Ecology Cluster, Genomics Research in Ecology and Evolution in Nature (GREEN), Groningen Institute for Evolutionary Life Sciences (GELIFES), University of Groningen, 9747, AG Groningen, the Netherlands
| | - Qin Dong
- College of Resources, Sichuan Agricultural University, Chengdu, 611130, China
| | - Meijuan Xiao
- College of Resources, Sichuan Agricultural University, Chengdu, 611130, China
| | - Bing Li
- College of Resources, Sichuan Agricultural University, Chengdu, 611130, China
| | - Olivera Topalović
- Department of Agroecology, Aarhus University, Forsøgsvej 1, 4200, Slagelse, Denmark
| | - Qi Tao
- College of Resources, Sichuan Agricultural University, Chengdu, 611130, China
| | - Xiaoyan Tang
- College of Resources, Sichuan Agricultural University, Chengdu, 611130, China
| | - Rong Huang
- College of Resources, Sichuan Agricultural University, Chengdu, 611130, China
| | - Guangdeng Chen
- College of Resources, Sichuan Agricultural University, Chengdu, 611130, China
| | - Huanxiu Li
- College of Horticulture, Sichuan Agricultural University, Chengdu, 611130, China
| | - Yulan Chen
- Liangshan Branch of Sichuan Provincial Tobacco Company, Xichang, 615000, China
| | - Ying Feng
- Key Laboratory of Environment Remediation and Ecological Health of Ministry of Education, College of Environmental and Resource Sciences, Zhejiang University, Hangzhou, China.
| | - Changquan Wang
- College of Resources, Sichuan Agricultural University, Chengdu, 611130, China.
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Kadri T, Miri S, Robert T, Kaur Brar S, Rouissi T, LaxmanPachapur V, Lauzon JM. Pilot-scale production and in-situ application of petroleum-degrading enzyme cocktail from Alcanivorax borkumensis. CHEMOSPHERE 2022; 295:133840. [PMID: 35124086 DOI: 10.1016/j.chemosphere.2022.133840] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/09/2021] [Revised: 01/30/2022] [Accepted: 01/31/2022] [Indexed: 06/14/2023]
Abstract
Petroleum degrading enzymes can be used as an alternative way to improve petroleum bioremediation approaches. Alcanivorax borkumensis is an alkane-degrading bacteria that can produce petroleum degrading enzymes such as alkane hydroxylase and lipase. In this study, pilot-scale Alcanivorax borkumensis fermentation was developed for producing large volumes of petroleum degrading enzymes cocktail (∼900 L). Different process conditions, such as inoculum age 72 h and size 4% v/v, temperature 30 ± 1 °C, agitation speed at 150 rpm and, fermentation period 3 days were determined as the optimum for producing alkane hydroxylase and lipase activity. The oxygen transfer capacity was studied for obtaining better bacterial growth and higher enzyme activities in bioreactor process optimization as well as scale-up. Results showed that the maximum values of oxygen mass transfer coefficient (kLa), oxygen uptake rate (OUR), oxygen transfer rate (OTR), alkane hydroxylase, lipase, and cell count were 196.95 h-1, 0.92 mmol O2/L/h, 1.8 mmol O2/L/h, 222.49 U/mL, 325 U/mL, and 8.6 × 1010 CFU/mL, respectively. Compared with the bench-scale bioreactors, the 150 L fermenter showed a better oxygen transfer rate which affected the cell growth that doubled the number and enzymes production that increased. Then, the enzyme cocktail was used for a field test in a diesel source zone using a 5-spot well pattern. The results showed a significant reduction in concentrations of C10 - C50 (from 36% to > 99%) after one injection of enzyme cocktail, mainly for the contaminated soils located in the saturated zone of the unconfined aquifer. This study confirmed the scaling-up ofalkane-degrading enzyme production to an industrial-scale and its application for effective bioremediation of petroleum contaminated sites.
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Affiliation(s)
- Tayssir Kadri
- INRS-ETE, Université du Québec, 490, Rue de la Couronne, Québec, G1K 9A9, Canada
| | - Saba Miri
- INRS-ETE, Université du Québec, 490, Rue de la Couronne, Québec, G1K 9A9, Canada; Department of Civil Engineering, Lassonde School of Engineering, York University, North York, Toronto, Ontario, M3J 1P3, Canada
| | - Thomas Robert
- INRS-ETE, Université du Québec, 490, Rue de la Couronne, Québec, G1K 9A9, Canada; TechnoRem Inc., 4701, Rue Louis-B.-Mayer, Laval, Québec, H7P 6G5, Canada
| | - Satinder Kaur Brar
- INRS-ETE, Université du Québec, 490, Rue de la Couronne, Québec, G1K 9A9, Canada; Department of Civil Engineering, Lassonde School of Engineering, York University, North York, Toronto, Ontario, M3J 1P3, Canada.
| | - Tarek Rouissi
- INRS-ETE, Université du Québec, 490, Rue de la Couronne, Québec, G1K 9A9, Canada
| | | | - Jean-Marc Lauzon
- TechnoRem Inc., 4701, Rue Louis-B.-Mayer, Laval, Québec, H7P 6G5, Canada
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Miri S, Rasooli A, Brar SK, Rouissi T, Martel R. Biodegradation of p-xylene-a comparison of three psychrophilic Pseudomonas strains through the lens of gene expression. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2022; 29:21465-21479. [PMID: 34762239 DOI: 10.1007/s11356-021-17387-5] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/06/2021] [Accepted: 11/02/2021] [Indexed: 05/21/2023]
Abstract
p-Xylene is considered a recalcitrant compound despite showing a similar aromatic structure to other BTEXs (benzene, toluene, ethylbenzene, xylene isomers). This study evaluated the p-xylene biodegradation potential of three psychrophilic Pseudomonas strains (Pseudomonas putida S2TR-01, Pseudomonas synxantha S2TR-20, and Pseudomonas azotoformans S2TR-09). The p-xylene metabolism-related catabolic genes (xylM, xylA, and xylE) and the corresponding regulatory genes (xylR and xylS) of the selected strains were investigated. The biodegradation results showed that the P. azotoformans S2TR-09 strain was the only strain that was able to degrade 200 mg/L p-xylene after 60 h at 15 °C. The gene expression study indicated that the xylE (encoding catechol 2,3-dioxygenase) gene represents the bottleneck in p-xylene biodegradation. A lack of xylE expression leads to the accumulation of intermediates and the inhibition of biomass production and complete carbon recovery. The activity of xylene monooxygenase and catechol 2,3-dioxygenase was significantly increased in P. azotoformans S2TR-09 (0.5 and 0.08 U/mg, respectively) in the presence of p-xylene. The expression of the ring cleavage enzyme and its encoding gene (xylE) and activator (xylS) explained the differences in the p-xylene metabolism of the isolated bacteria and can be used as a novel biomarker of efficient p-xylene biodegradation at contaminated sites.
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Affiliation(s)
- Saba Miri
- Department of Civil Engineering, Lassonde School of Engineering, York University, North York, Toronto, ON, M3J 1P3, Canada
- INRS-ETE, Université du Québec, 490, Rue de la Couronne, Québec, G1K 9A9, Canada
| | - Azadeh Rasooli
- Department of Civil Engineering, Lassonde School of Engineering, York University, North York, Toronto, ON, M3J 1P3, Canada
| | - Satinder Kaur Brar
- Department of Civil Engineering, Lassonde School of Engineering, York University, North York, Toronto, ON, M3J 1P3, Canada.
- INRS-ETE, Université du Québec, 490, Rue de la Couronne, Québec, G1K 9A9, Canada.
| | - Tarek Rouissi
- INRS-ETE, Université du Québec, 490, Rue de la Couronne, Québec, G1K 9A9, Canada
| | - Richard Martel
- INRS-ETE, Université du Québec, 490, Rue de la Couronne, Québec, G1K 9A9, Canada
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Miri S, Davoodi SM, Robert T, Brar SK, Martel R, Rouissi T. Enzymatic biodegradation of highly p-xylene contaminated soil using cold-active enzymes: A soil column study. JOURNAL OF HAZARDOUS MATERIALS 2022; 423:127099. [PMID: 34523486 DOI: 10.1016/j.jhazmat.2021.127099] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/25/2021] [Revised: 08/24/2021] [Accepted: 08/29/2021] [Indexed: 06/13/2023]
Abstract
Enzymatic bioremediation is a sustainable and environment-friendly method for the clean-up of contaminated soil and water. In the present study, enzymatic bioremediation was designed using cold-active enzymes (psychrozymes) which catalyze oxidation steps of p-xylene biodegradation in highly contaminated soil (initial concentration of 13,000 mg/kg). The enzymes were obtained via co-culture of two psychrophilic Pseudomonas strains and characterized by kinetic studies and tandem LC-MS/MS. To mimic in situ application of enzyme mixture, bioremediation of p-xylene contaminated soil was carried out in soil column (140 mL) tests with the injection (3 pore volume) of different concentrations of enzyme cocktails (X, X/5, and X/10). Enzyme cocktail in X concentration contained about 10 U/mL of xylene monooxygenase (XMO) and 20 U/mL of catechol 2, 3 dioxygenases (C2,3D). X/5 and X/10 correspond to 5x and 10x dilution of enzyme cocktail respectively. The results showed that around 92-94% p-xylene removal was achieved in the treated soil column with enzyme concentration X, X/5 after second enzyme injection. While the p-xylene removal rate obtained by X/10 concentration of enzyme was less than 30% and near to untreated soil column (22.2%). The analysis of microbial diversity and biotoxicity assay (root elongation and seed germination) confirmed the advantage of using enzymes as a green and environmentally friendly approach for decontamination of pollutants with minimal or even positive effects on microbial community and also enrichment of soil after treatment.
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Affiliation(s)
- Saba Miri
- Department of Civil Engineering, Lassonde School of Engineering, York University, North York, Toronto, Ontario M3J 1P3, Canada; INRS-ETE, Université du Québec, 490, Rue de la Couronne, Québec G1K 9A9, Canada.
| | - Seyyed Mohammadreza Davoodi
- Department of Civil Engineering, Lassonde School of Engineering, York University, North York, Toronto, Ontario M3J 1P3, Canada; INRS-ETE, Université du Québec, 490, Rue de la Couronne, Québec G1K 9A9, Canada.
| | - Thomas Robert
- INRS-ETE, Université du Québec, 490, Rue de la Couronne, Québec G1K 9A9, Canada.
| | - Satinder Kaur Brar
- Department of Civil Engineering, Lassonde School of Engineering, York University, North York, Toronto, Ontario M3J 1P3, Canada; INRS-ETE, Université du Québec, 490, Rue de la Couronne, Québec G1K 9A9, Canada.
| | - Richard Martel
- INRS-ETE, Université du Québec, 490, Rue de la Couronne, Québec G1K 9A9, Canada.
| | - Tarek Rouissi
- INRS-ETE, Université du Québec, 490, Rue de la Couronne, Québec G1K 9A9, Canada.
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Nikovaev YA, Borzenkov IA, Demkina EV, Loiko NG, Kanapatskii TA, Perminova IV, Khreptugova AN, Grigor’eva NV, Bliznets IV, Manucharova NA, Sorokin VV, Kovalenko MA, El’-Registan GI. New Biocomposite Materials Based on Hydrocarbon-Oxidizing Microorganisms and Their Potential for Oil Products Degradation. Microbiology (Reading) 2021. [DOI: 10.1134/s0026261721060114] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022] Open
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30
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Cao Y, Zhang B, Zhu Z, Rostami M, Dong G, Ling J, Lee K, Greer CW, Chen B. Access-dispersion-recovery strategy for enhanced mitigation of heavy crude oil pollution using magnetic nanoparticles decorated bacteria. BIORESOURCE TECHNOLOGY 2021; 337:125404. [PMID: 34139564 DOI: 10.1016/j.biortech.2021.125404] [Citation(s) in RCA: 13] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/04/2021] [Revised: 06/04/2021] [Accepted: 06/09/2021] [Indexed: 06/12/2023]
Abstract
Heavy crude oil (HCO) pollution has gained global attention, but traditional bioremediating practices demonstrate limited effectiveness. This study developed magnetic nanoparticles decorated bacteria (MNPB) using an oil-degrading and biosurfactant-producing Rhodococcus erythropolis species and identified a novel access-dispersion-recovery strategy for enhanced HCO pollution mitigation. The strategy entails (1) magnetic navigation of the MNPB towards HCO layer, (2) enhanced oil dispersion and formation of suspended oil-bacteria aggregates, and (3) magnetic recovery of these aggregates. The UV-spectrophotometer analysis showed that this strategy can enable up to 62% removal of HCO. The GC-MS analysis demonstrated that the MNPB enhanced the degradation of low-molecular-weight aromatics comparing with the pure bacteria, and the recovery process further removed oil-bacteria aggregates and entrained high-molecular-weight aromatics. The feasibility of using MNPB to mitigate HCO pollution could shed light on the emerging bioremediation applications.
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Affiliation(s)
- Yiqi Cao
- The Northern Region Persistent Organic Pollution (NRPOP) Control Laboratory, Faculty of Engineering and Applied Science, Memorial University, St. John's, NL A1B 3X5, Canada
| | - Baiyu Zhang
- The Northern Region Persistent Organic Pollution (NRPOP) Control Laboratory, Faculty of Engineering and Applied Science, Memorial University, St. John's, NL A1B 3X5, Canada.
| | - Zhiwen Zhu
- The Northern Region Persistent Organic Pollution (NRPOP) Control Laboratory, Faculty of Engineering and Applied Science, Memorial University, St. John's, NL A1B 3X5, Canada
| | - Masoumeh Rostami
- The Northern Region Persistent Organic Pollution (NRPOP) Control Laboratory, Faculty of Engineering and Applied Science, Memorial University, St. John's, NL A1B 3X5, Canada
| | - Guihua Dong
- The Northern Region Persistent Organic Pollution (NRPOP) Control Laboratory, Faculty of Engineering and Applied Science, Memorial University, St. John's, NL A1B 3X5, Canada
| | - Jingjing Ling
- The Northern Region Persistent Organic Pollution (NRPOP) Control Laboratory, Faculty of Engineering and Applied Science, Memorial University, St. John's, NL A1B 3X5, Canada
| | - Kenneth Lee
- Fisheries and Oceans Canada, Ecosystem Science, Ottawa, ON K1A 0E6, Canada
| | - Charles W Greer
- National Research Council Canada, Energy, Mining and Environment Research Centre, Montreal, QC H4P 2R2, Canada
| | - Bing Chen
- The Northern Region Persistent Organic Pollution (NRPOP) Control Laboratory, Faculty of Engineering and Applied Science, Memorial University, St. John's, NL A1B 3X5, Canada
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31
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Production and analysis of capsules containing microorganisms consortiated for future application in petroleum bioremediation. Biodegradation 2021; 32:613-625. [PMID: 34241755 DOI: 10.1007/s10532-021-09956-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/28/2021] [Accepted: 06/22/2021] [Indexed: 10/20/2022]
Abstract
Oil spills cause severe environmental and economic impacts, so the use of bioremediation techniques has been widely studied to solve this problem. Due to its complex composition, the oil prevents the full action of microorganisms, and in this way, the microbial consortium encapsulation technique is an innovation in the use of bacteria and biomass in the face of possible oil degradation, with the possibility of overcoming techniques such as bio-enhancement and biostimulation in the face of factors such as nutrient availability, oxygenation and temperature. Therefore, this work aims to produce capsules containing microbiological consortium and analyze its characteristics using the techniques TGA, DSC, FESEM, viable cell count, emulsification index and surface tension, in order to propose the best conditions to be applied. TGA and DSC results showed that the capsules have thermal stability in the range of 25-40 °C. Viable cell counts were more effective in capsules containing 1% (w/v) sodium alginate, and the emulsification index showed a large increase (80%) from day 5, as well as surface tension had a large drop (48%) in the same period. The increase in the emulsification index is caused by the increase in the production of biosurfactants (amphipathic molecules) by the bacteria consortium and this offers a greater contact between the microorganisms and the oil, providing best conditions for the degradation of oil. Therefore, all analyzes showed excellent results for future application in oil spills.
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Dhaka A, Chattopadhyay P. A review on physical remediation techniques for treatment of marine oil spills. JOURNAL OF ENVIRONMENTAL MANAGEMENT 2021; 288:112428. [PMID: 33831635 DOI: 10.1016/j.jenvman.2021.112428] [Citation(s) in RCA: 42] [Impact Index Per Article: 14.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/09/2020] [Revised: 02/20/2021] [Accepted: 03/19/2021] [Indexed: 05/25/2023]
Abstract
There is a huge risk of contamination of water bodies due to the various oil exploration, transport, and industrial operational activities that are taking place across the world. Physical remediation techniques are considered extremely important for tackling the problems of marine oil spills. This paper provides a unique, specific review on the physical remediation of marine oil spills with special emphasis on types of available physical remediation techniques and their working principles. It also describes the chief latest improvements in the physical remediation techniques that have taken place with time. The paper discusses the various ways by which oil and its derivatives contaminate, and the subsequent effects these contaminants have on the marine ecosystem. The article discusses salient features that make physical remediation an effective marine oil spill counter-measure capable of recovering appreciable amounts of oil while causing minimal or no damage to the marine ecosystem and the workers carrying out the cleanup. Regarding the physical remediation methods, future research may focus on the development of hybrid booms, improved performance of skimmers for different oil types, and further applications involving novel materials like nanoparticles, zeolites for sorbents.
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Affiliation(s)
- Abhinav Dhaka
- Department of Chemical Engineering, BITS Pilani, Pilan, 333031, Rajasthan, India
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Li Z, Cabana H, Lecka J, Brar SK, Galvez R, Bellenger JP. Efficiencies of selected biotreatments for the remediation of PAH in diluted bitumen contaminated soil microcosms. Biodegradation 2021; 32:563-576. [PMID: 34086180 DOI: 10.1007/s10532-021-09952-z] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/30/2020] [Accepted: 05/18/2021] [Indexed: 10/21/2022]
Abstract
Unconventional oils such as diluted bitumen from oil sands differs from most of conventional oils in terms of physiochemical properties and PAHs composition. This raises concerns regarding the effectiveness of current remediation strategies and protocols originally developed for conventional oil. Here we evaluated the efficiency of different biotreatment approaches, such as fungi inoculation (bioaugmentation), sludge addition (bioaugmentation/biostimulation), perennial grasses plantation (phytoremediation) and their combinations as well as natural attenuation (as control condition), for the remediation of soil contaminated by synthetic crude oil (a product of diluted bitumen) in laboratory microcosms. We specifically monitored the PAHs loss percentage (alkylated PAHs and unsubstituted 16 EPA Priority PAHs), the residue of PAHs and evaluated the ecotoxicity of soil after treatment. All treatments were highly efficient with more than ~ 80% of ∑PAHs loss after 60 days. Distinctive loss efficiencies between light PAHs (≤ 3 rings, ~ 96% average loss) and heavy PAHs (4-6 rings, ~ 29% average loss) were observed. The lowest average PAHs residue (0.10 ± 0.02 mg·kg-1, for an initial concentration of 0.29 ± 0.12 mg·kg-1) was achieved with the "sludge-plants (grasses)" combination. Sludge addition was the only treatment that achieved significantly lower ecotoxicity (3% ± 4% of growth inhibition of L. sativa) than the control (natural attenuation, 13% ± 4% of inhibition). Sludge addition, grasses plantation and "sludge-fungi combination" treatments could result in lower PAH exposure (than other treatments) in post-treated soil when using the Canadian Soil Quality Guidelines for the protection of environmental and human health for potentially carcinogenic and other PAHs.
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Affiliation(s)
- Ziang Li
- Department of Civil Engineering, Faculty of Science and Engineering, Laval University, Quebec City, Canada.,Department of Chemistry, Faculty of Sciences, Sherbrooke University, Sherbrooke, Canada
| | - Hubert Cabana
- Department of Civil and Building Engineering, Faculty of Engineering, Sherbrooke University, Sherbrooke, Canada
| | - Joanna Lecka
- Eau Terre Environnement Research Centre, INRS, Quebec City, Canada
| | - Satinder K Brar
- Eau Terre Environnement Research Centre, INRS, Quebec City, Canada
| | - Rosa Galvez
- Department of Civil Engineering, Faculty of Science and Engineering, Laval University, Quebec City, Canada
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Zhang B, Sun L, Song X, Huang D, Li M, Peng C, Wang W. Genetically engineered thermotolerant facultative anaerobes for high-efficient degradation of multiple hazardous nitroalkanes. JOURNAL OF HAZARDOUS MATERIALS 2021; 405:124253. [PMID: 33144004 DOI: 10.1016/j.jhazmat.2020.124253] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/05/2020] [Revised: 10/09/2020] [Accepted: 10/09/2020] [Indexed: 06/11/2023]
Abstract
Nitroalkanes are important industrial raw materials but also toxic pollutants, which are difficult to degrade once released into the environment. In this study, to significantly improve the degradation-efficiency of multiple nitroalkanes, a facultative anaerobe was genetically engineered, possible influencing factors and simulated application experiments of bioreactor were tested and evaluated. Among all engineered recombinants, the most effective strains NG-S1 (anaerobic) and NG-S2 (aerobic) displayed 2-fold and 2.8-fold final degradation rates higher than the wild type, respectively. Exogenous components, particularly those that enhance coenzyme synthesis, helped to increase the degradation rate, as the level of coenzymes affected full function of overexpressed nitroalkane oxidase. Importantly, simulated mixed-nitroalkane-wastewater bioreactor experiments proved excellent and sustainable degradation performance of the engineered strains for potential industrial applications. Collectively, these findings provide a promising thermophilic biological engineering platform and a new perspective for high-efficient and continuous environmental bioremediation of hazardous pollutants under aerobic and anaerobic conditions.
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Affiliation(s)
- Bingling Zhang
- Key Laboratory of Molecular Microbiology and Technology, Ministry of Education, TEDA Institute of Biological Sciences and Biotechnology, Nankai University, TEDA, Tianjin 300457, PR China
| | - Linbo Sun
- Key Laboratory of Molecular Microbiology and Technology, Ministry of Education, TEDA Institute of Biological Sciences and Biotechnology, Nankai University, TEDA, Tianjin 300457, PR China
| | - Xiaoru Song
- Key Laboratory of Molecular Microbiology and Technology, Ministry of Education, TEDA Institute of Biological Sciences and Biotechnology, Nankai University, TEDA, Tianjin 300457, PR China
| | - Di Huang
- Key Laboratory of Molecular Microbiology and Technology, Ministry of Education, TEDA Institute of Biological Sciences and Biotechnology, Nankai University, TEDA, Tianjin 300457, PR China
| | - Mingchang Li
- Key Laboratory of Molecular Microbiology and Technology, Ministry of Education, TEDA Institute of Biological Sciences and Biotechnology, Nankai University, TEDA, Tianjin 300457, PR China
| | - Chenchen Peng
- Key Laboratory of Molecular Microbiology and Technology, Ministry of Education, TEDA Institute of Biological Sciences and Biotechnology, Nankai University, TEDA, Tianjin 300457, PR China
| | - Wei Wang
- Key Laboratory of Molecular Microbiology and Technology, Ministry of Education, TEDA Institute of Biological Sciences and Biotechnology, Nankai University, TEDA, Tianjin 300457, PR China; Tianjin Key Laboratory of Microbial Functional Genomics, Tianjin 300457, PR China.
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Oyewusi HA, Wahab RA, Huyop F. Whole genome strategies and bioremediation insight into dehalogenase-producing bacteria. Mol Biol Rep 2021; 48:2687-2701. [PMID: 33650078 DOI: 10.1007/s11033-021-06239-7] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/10/2020] [Accepted: 02/16/2021] [Indexed: 12/11/2022]
Abstract
An integral approach to decoding both culturable and uncultured microorganisms' metabolic activity involves the whole genome sequencing (WGS) of individual/complex microbial communities. WGS of culturable microbes, amplicon sequencing, metagenomics, and single-cell genome analysis are selective techniques integrating genetic information and biochemical mechanisms. These approaches transform microbial biotechnology into a quick and high-throughput culture-independent evaluation and exploit pollutant-degrading microbes. They are windows into enzyme regulatory bioremediation pathways (i.e., dehalogenase) and the complete bioremediation process of organohalide pollutants. While the genome sequencing technique is gaining the scientific community's interest, it is still in its infancy in the field of pollutant bioremediation. The techniques are becoming increasingly helpful in unraveling and predicting the enzyme structure and explore metabolic and biodegradation capabilities.
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Affiliation(s)
- Habeebat Adekilekun Oyewusi
- Department of Biosciences, Faculty of Science, Universiti Teknologi Malaysia, 81310, Johor Bahru, Johor, Malaysia.
- Department of Biochemistry, School of Science and Computer Studies, Federal Polytechnic Ado Ekiti, PMB 5351, Ado Ekiti, Ekiti State, Nigeria.
| | - Roswanira Abdul Wahab
- Department of Chemistry, Faculty of Science, Universiti Teknologi Malaysia, 81310, Johor Bahru, Johor, Malaysia
| | - Fahrul Huyop
- Department of Biosciences, Faculty of Science, Universiti Teknologi Malaysia, 81310, Johor Bahru, Johor, Malaysia.
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Miri S, Davoodi SM, Brar SK, Rouissi T, Sheng Y, Martel R. Psychrozymes as novel tools to biodegrade p-xylene and potential use for contaminated groundwater in the cold climate. BIORESOURCE TECHNOLOGY 2021; 321:124464. [PMID: 33302008 DOI: 10.1016/j.biortech.2020.124464] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/28/2020] [Revised: 11/24/2020] [Accepted: 11/25/2020] [Indexed: 06/12/2023]
Abstract
Sites contaminated by petroleum hydrocarbons in cold-climate regions have recently received significant attention due to their sensitive ecosystem and human health impacts. Two cold-adapted pseudomonas strains were isolated from contaminated groundwater and soil. As xylene monooxygenase from Pseudomonas synxantha S2TR-26 and catechol 2,3-dioxygenase from Pseudomonas mandelii S2TR-08, have a matching end product, they acted in symphony to degrade p-xylene. Their unique thermodynamic and kinetic behavior permits them to achieve rapid degradation of p-xylene at low temperatures (<15 °C). The results showed that the sequential action led to the conversion of 200 mg/l of p-xylene within 72 h and complete degradation after 120 h. The cocktail of these enzymes with a ratio of 1:1.5 (xylene monooxygenase: catechol 2, 3-dioxygenase) confirmed the complete degradation of p-xylene within 48 h at 15 °C. This approach will allow efficient biodegradation of p-xylene to minimize the bioremediation duration in cold-climate regions.
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Affiliation(s)
- Saba Miri
- Department of Civil Engineering, Lassonde School of Engineering, York University, North York, Toronto, Ontario M3J 1P3, Canada; INRS-ETE, Université du Québec, 490, Rue de la Couronne, Québec G1K 9A9, Canada.
| | - Seyyed Mohammadreza Davoodi
- Department of Civil Engineering, Lassonde School of Engineering, York University, North York, Toronto, Ontario M3J 1P3, Canada; INRS-ETE, Université du Québec, 490, Rue de la Couronne, Québec G1K 9A9, Canada.
| | - Satinder Kaur Brar
- Department of Civil Engineering, Lassonde School of Engineering, York University, North York, Toronto, Ontario M3J 1P3, Canada; INRS-ETE, Université du Québec, 490, Rue de la Couronne, Québec G1K 9A9, Canada.
| | - Tarek Rouissi
- INRS-ETE, Université du Québec, 490, Rue de la Couronne, Québec G1K 9A9, Canada.
| | - Yi Sheng
- Department of Biology, Life Science, York University, North York, Toronto, Ontario Canada.
| | - Richard Martel
- INRS-ETE, Université du Québec, 490, Rue de la Couronne, Québec G1K 9A9, Canada.
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Sun N, Zhu Z, Zeng G. Bioinspired superwetting fibrous skin with hierarchical roughness for efficient oily water separation. THE SCIENCE OF THE TOTAL ENVIRONMENT 2020; 744:140822. [PMID: 32758995 DOI: 10.1016/j.scitotenv.2020.140822] [Citation(s) in RCA: 16] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/06/2020] [Revised: 06/24/2020] [Accepted: 07/06/2020] [Indexed: 06/11/2023]
Abstract
Developing superwetting membranes with interconnected pore and multi-scale roughness for efficient oily water separation is significant but challenging owing to the limitations of low water flux and membrane fouling. Herein, we report a scalable method to develop superwetting membranes with superhydrophilicity and underwater superoleophobicity for oily water separation. This novel approach, composed of electrospinning/electrospraying of polyacrylonitrile (PAN), was to fabricate rough sphere membrane substrate, followed by in-situ polymerization of dopamine/polyethyleneimine (DA/PEI) to positively charge the fiber skin and then subsequent immersed into the negatively charged Ludox solution to construct rough membrane surface via electrostatic attraction. Benefiting from the rough sphere surface of the fibrous skin layer, the resultant membrane displayed micro/nanostructured surfaces with intriguing in-air superhydrophilicity of 0° and underwater superoleophobicity of 166° as well as robust oil-proof pressure of 83.55 kPa. As a proof-of-concept, the resultant membrane achieved high water flux and oil rejection efficiency as well as fantastic durability and antifouling performance toward the separation of highly emulsified oily water. The integration of electrospinning/electrospraying with bioinspired method is also expected to fabricate superwetting sphere surface membrane with interconnected pores for other selective separation applications.
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Affiliation(s)
- Nan Sun
- School of Water Conservancy and Civil Engineering, Northeast Agricultural University, Harbin 150030, China
| | - Zhigao Zhu
- Key Laboratory of New Membrane Materials, Ministry of Industry and Information Technology, School of Environment and Biological Engineering, Nanjing University of Science and Technology, Nanjing 210094, China.
| | - Gaofeng Zeng
- CAS Key Laboratory of Low-Carbon Conversion Science and Engineering, Shanghai Advanced Research Institute, Chinese Academy of Sciences, Shanghai 201210, China
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Development of nitrate stimulated hydrocarbon degrading microbial consortia from refinery sludge as potent bioaugmenting agent for enhanced bioremediation of petroleum contaminated waste. World J Microbiol Biotechnol 2020; 36:156. [DOI: 10.1007/s11274-020-02925-z] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/21/2020] [Accepted: 09/03/2020] [Indexed: 12/17/2022]
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Ho MT, Li MSM, McDowell T, MacDonald J, Yuan ZC. Characterization and genomic analysis of a diesel-degrading bacterium, Acinetobacter calcoaceticus CA16, isolated from Canadian soil. BMC Biotechnol 2020; 20:39. [PMID: 32711499 PMCID: PMC7477861 DOI: 10.1186/s12896-020-00632-z] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/18/2019] [Accepted: 07/16/2020] [Indexed: 12/18/2022] Open
Abstract
Background With the high demand for diesel across the world, environmental decontamination from its improper usage, storage and accidental spills becomes necessary. One highly environmentally friendly and cost-effective decontamination method is to utilize diesel-degrading microbes as a means for bioremediation. Here, we present a newly isolated and identified strain of Acinetobacter calcoaceticus (‘CA16’) as a candidate for the bioremediation of diesel-contaminated areas. Results Acinetobacter calcoaceticus CA16 was able to survive and grow in minimal medium with diesel as the only source of carbon. We determined through metabolomics that A. calcoaceticus CA16 appears to be efficient at diesel degradation. Specifically, CA16 is able to degrade 82 to 92% of aliphatic alkane hydrocarbons (CnHn + 2; where n = 12–18) in 28 days. Several diesel-degrading genes (such as alkM and xcpR) that are present in other microbes were also found to be activated in CA16. Conclusions The results presented here suggest that Acinetobacter strain CA16 has good potential in the bioremediation of diesel-polluted environments.
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Affiliation(s)
- Margaret T Ho
- Department of Microbiology and Immunology, The University of Western Ontario, 1151 Richmond Street, London, Ontario, N6A 5B7, Canada.,Institute of Biomaterials and Biomedical Engineering, University of Toronto, Toronto, Ontario, Canada
| | - Michelle S M Li
- Department of Microbiology and Immunology, The University of Western Ontario, 1151 Richmond Street, London, Ontario, N6A 5B7, Canada
| | - Tim McDowell
- London Research and Development Centre, Agriculture and Agri-Food Canada, 1391 Sandford Street, London, Ontario, N5V 4T3, Canada
| | - Jacqueline MacDonald
- Department of Microbiology and Immunology, The University of Western Ontario, 1151 Richmond Street, London, Ontario, N6A 5B7, Canada
| | - Ze-Chun Yuan
- Department of Microbiology and Immunology, The University of Western Ontario, 1151 Richmond Street, London, Ontario, N6A 5B7, Canada. .,London Research and Development Centre, Agriculture and Agri-Food Canada, 1391 Sandford Street, London, Ontario, N5V 4T3, Canada.
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