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Liu Z, Ma L, Zhang H, Zhuang J, Man J, Siwy ZS, Qiu Y. Dynamic Response of Ionic Current in Conical Nanopores. ACS APPLIED MATERIALS & INTERFACES 2024; 16:30496-30505. [PMID: 38830306 DOI: 10.1021/acsami.4c02078] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/05/2024]
Abstract
Ionic current rectification (ICR) of charged conical nanopores has various applications in fields including nanofluidics, biosensing, and energy conversion, whose function is closely related to the dynamic response of nanopores. The occurrence of ICR originates from the ion enrichment and depletion in conical pores, whose formation is found to be affected by the scanning rate of voltages. Here, through time-dependent simulations, we investigate the variation of ion current under electric fields and the dynamic formation of ion enrichment and depletion, which can reflect the response time of conical nanopores. The response time of nanopores when ion enrichment forms, i.e., at the "on" state is significantly longer than that with the formation of ion depletion, i.e., at the "off" state. Our simulation results reveal the regulation of response time by different nanopore parameters including the surface charge density, pore length, tip, and base radius, as well as the applied conditions such as the voltage and bulk concentration. The response time of nanopores is closely related to the surface charge density, pore length, voltage, and bulk concentration. Our uncovered dynamic response mechanism of the ionic current can guide the design of nanofluidic devices with conical nanopores, including memristors, ionic switches, and rectifiers.
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Affiliation(s)
- Zhe Liu
- Key Laboratory of High Efficiency and Clean Mechanical Manufacture of Ministry of Education, National Demonstration Center for Experimental Mechanical Engineering Education, School of Mechanical Engineering, Shandong University, Jinan 250061, China
- Shenzhen Research Institute of Shandong University, Shenzhen 518000, China
| | - Long Ma
- Key Laboratory of High Efficiency and Clean Mechanical Manufacture of Ministry of Education, National Demonstration Center for Experimental Mechanical Engineering Education, School of Mechanical Engineering, Shandong University, Jinan 250061, China
| | - Hongwen Zhang
- Key Laboratory of High Efficiency and Clean Mechanical Manufacture of Ministry of Education, National Demonstration Center for Experimental Mechanical Engineering Education, School of Mechanical Engineering, Shandong University, Jinan 250061, China
| | - Jiakun Zhuang
- Key Laboratory of High Efficiency and Clean Mechanical Manufacture of Ministry of Education, National Demonstration Center for Experimental Mechanical Engineering Education, School of Mechanical Engineering, Shandong University, Jinan 250061, China
| | - Jia Man
- Key Laboratory of High Efficiency and Clean Mechanical Manufacture of Ministry of Education, National Demonstration Center for Experimental Mechanical Engineering Education, School of Mechanical Engineering, Shandong University, Jinan 250061, China
| | - Zuzanna S Siwy
- Department of Physics and Astronomy, University of California, Irvine, California 92697, United States
| | - Yinghua Qiu
- Key Laboratory of High Efficiency and Clean Mechanical Manufacture of Ministry of Education, National Demonstration Center for Experimental Mechanical Engineering Education, School of Mechanical Engineering, Shandong University, Jinan 250061, China
- Shenzhen Research Institute of Shandong University, Shenzhen 518000, China
- Suzhou Research Institute of Shandong University, Suzhou 215123, China
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2
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Ahmed SA, Liu Y, Xiong T, Zhao Y, Xie B, Pan C, Ma W, Yu P. Iontronic Sensing Based on Confined Ion Transport. Anal Chem 2024; 96:8056-8077. [PMID: 38663001 DOI: 10.1021/acs.analchem.4c01354] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/22/2024]
Affiliation(s)
- Saud Asif Ahmed
- Beijing National Laboratory for Molecular Science, CAS Key Laboratory of Analytical Chemistry for Living Biosystems, Institute of Chemistry, Chinese Academy of Sciences, Beijing 100190, China
| | - Ying Liu
- Beijing National Laboratory for Molecular Science, CAS Key Laboratory of Analytical Chemistry for Living Biosystems, Institute of Chemistry, Chinese Academy of Sciences, Beijing 100190, China
- University of Chinese Academy of Sciences, Beijing 100190, China
| | - Tianyi Xiong
- Beijing National Laboratory for Molecular Science, CAS Key Laboratory of Analytical Chemistry for Living Biosystems, Institute of Chemistry, Chinese Academy of Sciences, Beijing 100190, China
- University of Chinese Academy of Sciences, Beijing 100190, China
| | - Yueru Zhao
- Beijing National Laboratory for Molecular Science, CAS Key Laboratory of Analytical Chemistry for Living Biosystems, Institute of Chemistry, Chinese Academy of Sciences, Beijing 100190, China
- University of Chinese Academy of Sciences, Beijing 100190, China
| | - Boyang Xie
- Beijing National Laboratory for Molecular Science, CAS Key Laboratory of Analytical Chemistry for Living Biosystems, Institute of Chemistry, Chinese Academy of Sciences, Beijing 100190, China
- University of Chinese Academy of Sciences, Beijing 100190, China
| | - Cong Pan
- Beijing National Laboratory for Molecular Science, CAS Key Laboratory of Analytical Chemistry for Living Biosystems, Institute of Chemistry, Chinese Academy of Sciences, Beijing 100190, China
| | - Wenjie Ma
- Beijing National Laboratory for Molecular Science, CAS Key Laboratory of Analytical Chemistry for Living Biosystems, Institute of Chemistry, Chinese Academy of Sciences, Beijing 100190, China
| | - Ping Yu
- Beijing National Laboratory for Molecular Science, CAS Key Laboratory of Analytical Chemistry for Living Biosystems, Institute of Chemistry, Chinese Academy of Sciences, Beijing 100190, China
- University of Chinese Academy of Sciences, Beijing 100190, China
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3
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Laucirica G, Toum-Terrones Y, Cayón VM, Toimil-Molares ME, Azzaroni O, Marmisollé WA. Advances in nanofluidic field-effect transistors: external voltage-controlled solid-state nanochannels for stimulus-responsive ion transport and beyond. Phys Chem Chem Phys 2024; 26:10471-10493. [PMID: 38506166 DOI: 10.1039/d3cp06142f] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/21/2024]
Abstract
Ion channels, intricate protein structures facilitating precise ion passage across cell membranes, are pivotal for vital cellular functions. Inspired by the remarkable capabilities of biological ion channels, the scientific community has ventured into replicating these principles in fully abiotic solid-state nanochannels (SSNs). Since the gating mechanisms of SSNs rely on variations in the physicochemical properties of the channel surface, the modification of their internal architecture and chemistry constitutes a powerful strategy to control the transport properties and, consequently, render specific functionalities. In this framework, both the design of the nanofluidic platform and the subsequent selection and attachment of different building blocks gain special attention. Similar to biological ion channels, functional SSNs offer the potential to finely modulate ion transport in response to various stimuli, leading to innovations in a variety of fields. This comprehensive review delves into the intricate world of ion transport across stimuli-responsive SSNs, focusing on the development of external voltage-controlled nanofluidic devices. This kind of field-effect nanofluidic technology has attracted special interest due to the possibility of real-time reconfiguration of the ion transport with a non-invasive strategy. These properties have found interesting applications in drug delivery, biosensing, and nanoelectronics. This document will address the fundamental principles of ion transport through SSNs and the construction, modification, and applications of external voltage-controlled SSNs. It will also address future challenges and prospects, offering a comprehensive perspective on this evolving field.
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Affiliation(s)
- G Laucirica
- Instituto de Investigaciones Fisicoquímicas Teóricas y Aplicadas (INIFTA), Departamento de Química, Facultad de Ciencias Exactas, Universidad Nacional de La Plata, CONICET - CC 16 Suc. 4, 1900 La Plata, Argentina.
| | - Y Toum-Terrones
- Instituto de Investigaciones Fisicoquímicas Teóricas y Aplicadas (INIFTA), Departamento de Química, Facultad de Ciencias Exactas, Universidad Nacional de La Plata, CONICET - CC 16 Suc. 4, 1900 La Plata, Argentina.
| | - V M Cayón
- Department of Materials- and Geosciences, Technical University of Darmstadt, Darmstadt, Germany
| | - M E Toimil-Molares
- GSI Helmholtzzentrum für Schwerionenforschung GmbH, 64291 Darmstadt, Germany
- Department of Materials- and Geosciences, Technical University of Darmstadt, Darmstadt, Germany
| | - O Azzaroni
- Instituto de Investigaciones Fisicoquímicas Teóricas y Aplicadas (INIFTA), Departamento de Química, Facultad de Ciencias Exactas, Universidad Nacional de La Plata, CONICET - CC 16 Suc. 4, 1900 La Plata, Argentina.
| | - W A Marmisollé
- Instituto de Investigaciones Fisicoquímicas Teóricas y Aplicadas (INIFTA), Departamento de Química, Facultad de Ciencias Exactas, Universidad Nacional de La Plata, CONICET - CC 16 Suc. 4, 1900 La Plata, Argentina.
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4
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Cetindag S, Park SJ, Buchsbaum SF, Zheng Y, Liu M, Wang S, Xiang R, Maruyama S, Fornasiero F, Shan JW. Ion and Hydrodynamic Translucency in 1D van der Waals Heterostructured Boron-Nitride Single-Walled Carbon Nanotubes. ACS NANO 2024; 18:355-363. [PMID: 38134351 DOI: 10.1021/acsnano.3c07282] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/24/2023]
Abstract
An unresolved challenge in nanofluidics is tuning ion selectivity and hydrodynamic transport in pores, particularly for those with diameters larger than a nanometer. In contrast to conventional strategies that focus on changing surface functionalization or confinement degree by varying the radial dimension of the pores, we explore a unique approach for manipulating ion selectivity and hydrodynamic flow enhancement by externally coating single-walled carbon nanotubes (SWCNTs) with a few layers of hexagonal boron nitride (h-BN). For van der Waals heterostructured BN-SWCNTs, we observed a 9-fold increase in cation selectivity for K+ versus Cl- compared to pristine SWCNTs of the same 2.2 nm diameter, while hydrodynamic slip lengths decreased by more than an order of magnitude. These results suggest that the single-layer graphene inner surface may be translucent to charge-regulation and hydrodynamic-slip effects arising from h-BN on the outside of the SWCNT. Such 1D heterostructures could serve as synthetic platforms with tunable properties for exploring distinct nanofluidic phenomena and their potential applications.
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Affiliation(s)
- Semih Cetindag
- Department of Mechanical and Aerospace Engineering, Rutgers University, Piscataway, New Jersey 08854, United States
| | - Sei Jin Park
- Physical and Life Sciences,Lawrence Livermore National Laboratory, Livermore, California 94550 United States
| | - Steven F Buchsbaum
- Physical and Life Sciences,Lawrence Livermore National Laboratory, Livermore, California 94550 United States
| | - Yongjia Zheng
- Department of Mechanical Engineering, The University of Tokyo, Tokyo 113-8656, Japan
| | - Ming Liu
- Department of Mechanical Engineering, The University of Tokyo, Tokyo 113-8656, Japan
| | - Shuhui Wang
- Department of Mechanical Engineering, The University of Tokyo, Tokyo 113-8656, Japan
| | - Rong Xiang
- Department of Mechanical Engineering, The University of Tokyo, Tokyo 113-8656, Japan
| | - Shigeo Maruyama
- Department of Mechanical Engineering, The University of Tokyo, Tokyo 113-8656, Japan
| | - Francesco Fornasiero
- Physical and Life Sciences,Lawrence Livermore National Laboratory, Livermore, California 94550 United States
| | - Jerry W Shan
- Department of Mechanical and Aerospace Engineering, Rutgers University, Piscataway, New Jersey 08854, United States
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5
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Stuber A, Schlotter T, Hengsteler J, Nakatsuka N. Solid-State Nanopores for Biomolecular Analysis and Detection. ADVANCES IN BIOCHEMICAL ENGINEERING/BIOTECHNOLOGY 2024; 187:283-316. [PMID: 38273209 DOI: 10.1007/10_2023_240] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/27/2024]
Abstract
Advances in nanopore technology and data processing have rendered DNA sequencing highly accessible, unlocking a new realm of biotechnological opportunities. Commercially available nanopores for DNA sequencing are of biological origin and have certain disadvantages such as having specific environmental requirements to retain functionality. Solid-state nanopores have received increased attention as modular systems with controllable characteristics that enable deployment in non-physiological milieu. Thus, we focus our review on summarizing recent innovations in the field of solid-state nanopores to envision the future of this technology for biomolecular analysis and detection. We begin by introducing the physical aspects of nanopore measurements ranging from interfacial interactions at pore and electrode surfaces to mass transport of analytes and data analysis of recorded signals. Then, developments in nanopore fabrication and post-processing techniques with the pros and cons of different methodologies are examined. Subsequently, progress to facilitate DNA sequencing using solid-state nanopores is described to assess how this platform is evolving to tackle the more complex challenge of protein sequencing. Beyond sequencing, we highlight the recent developments in biosensing of nucleic acids, proteins, and sugars and conclude with an outlook on the frontiers of nanopore technologies.
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Affiliation(s)
- Annina Stuber
- Laboratory of Biosensors and Bioelectronics, Institute for Biomedical Engineering, ETH Zürich, Zürich, Switzerland
| | - Tilman Schlotter
- Laboratory of Biosensors and Bioelectronics, Institute for Biomedical Engineering, ETH Zürich, Zürich, Switzerland
| | - Julian Hengsteler
- Laboratory of Biosensors and Bioelectronics, Institute for Biomedical Engineering, ETH Zürich, Zürich, Switzerland
| | - Nako Nakatsuka
- Laboratory of Biosensors and Bioelectronics, Institute for Biomedical Engineering, ETH Zürich, Zürich, Switzerland.
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Kamsma TM, Boon WQ, Spitoni C, van Roij R. Unveiling the capabilities of bipolar conical channels in neuromorphic iontronics. Faraday Discuss 2023; 246:125-140. [PMID: 37404026 PMCID: PMC10568261 DOI: 10.1039/d3fd00022b] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/31/2023] [Accepted: 03/07/2023] [Indexed: 07/06/2023]
Abstract
Conical channels filled with an aqueous electrolyte have been proposed as promising candidates for iontronic neuromorphic circuits. This is facilitated by a novel analytical model for the internal channel dynamics [T. M. Kamsma, W. Q. Boon, T. ter Rele, C. Spitoni and R. van Roij, Phys. Rev. Lett., 2023, 130(26), 268401], the relative ease of fabrication of conical channels, and the wide range of achievable memory retention times by varying the channel lengths. In this work, we demonstrate that the analytical model for conical channels can be generalized to channels with an inhomogeneous surface charge distribution, which we predict to exhibit significantly stronger current rectification and more pronounced memristive properties in the case of bipolar channels, i.e. channels where the tip and base carry a surface charge of opposite sign. Additionally, we show that the use of bipolar conical channels in a previously proposed iontronic circuit features hallmarks of neuronal communication, such as all-or-none action potentials and spike train generation. Bipolar channels allow, however, for circuit parameters in the range of their biological analogues, and exhibit membrane potentials that match well with biological mammalian action potentials, further supporting their potential biocompatibility.
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Affiliation(s)
- T M Kamsma
- Institute for Theoretical Physics, Utrecht University, Princetonplein 5, 3584 CC Utrecht, The Netherlands.
- Mathematical Institute, Utrecht University, Budapestlaan 6, 3584 CD Utrecht, The Netherlands
| | - W Q Boon
- Institute for Theoretical Physics, Utrecht University, Princetonplein 5, 3584 CC Utrecht, The Netherlands.
| | - C Spitoni
- Mathematical Institute, Utrecht University, Budapestlaan 6, 3584 CD Utrecht, The Netherlands
| | - R van Roij
- Institute for Theoretical Physics, Utrecht University, Princetonplein 5, 3584 CC Utrecht, The Netherlands.
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7
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Stuber A, Douaki A, Hengsteler J, Buckingham D, Momotenko D, Garoli D, Nakatsuka N. Aptamer Conformational Dynamics Modulate Neurotransmitter Sensing in Nanopores. ACS NANO 2023; 17:19168-19179. [PMID: 37721359 PMCID: PMC10569099 DOI: 10.1021/acsnano.3c05377] [Citation(s) in RCA: 10] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/14/2023] [Accepted: 09/08/2023] [Indexed: 09/19/2023]
Abstract
Aptamers that undergo conformational changes upon small-molecule recognition have been shown to gate the ionic flux through nanopores by rearranging the charge density within the aptamer-occluded orifice. However, mechanistic insight into such systems where biomolecular interactions are confined in nanoscale spaces is limited. To understand the fundamental mechanisms that facilitate the detection of small-molecule analytes inside structure-switching aptamer-modified nanopores, we correlated experimental observations to theoretical models. We developed a dopamine aptamer-functionalized nanopore sensor with femtomolar detection limits and compared the sensing behavior with that of a serotonin sensor fabricated with the same methodology. When these two neurotransmitters with comparable mass and equal charge were detected, the sensors showed an opposite electronic behavior. This distinctive phenomenon was extensively studied using complementary experimental techniques such as quartz crystal microbalance with dissipation monitoring, in combination with theoretical assessment by the finite element method and molecular dynamic simulations. Taken together, our studies demonstrate that the sensing behavior of aptamer-modified nanopores in detecting specific small-molecule analytes correlates with the structure-switching mechanisms of individual aptamers. We believe that such investigations not only improve our understanding of the complex interactions occurring in confined nanoscale environments but will also drive further innovations in biomimetic nanopore technologies.
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Affiliation(s)
- Annina Stuber
- Laboratory
of Biosensors and Bioelectronics, Institute for Biomedical Engineering, ETH Zürich, Zürich CH-8092, Switzerland
| | - Ali Douaki
- Instituto
Italiano di Tecnologia, Via Morego 30, 16163 Genova, Italy
| | - Julian Hengsteler
- Laboratory
of Biosensors and Bioelectronics, Institute for Biomedical Engineering, ETH Zürich, Zürich CH-8092, Switzerland
| | - Denis Buckingham
- Laboratory
of Biosensors and Bioelectronics, Institute for Biomedical Engineering, ETH Zürich, Zürich CH-8092, Switzerland
| | - Dmitry Momotenko
- Department
of Chemistry, Carl von Ossietzky University
of Oldenburg, Oldenburg D-26129, Germany
| | - Denis Garoli
- Instituto
Italiano di Tecnologia, Via Morego 30, 16163 Genova, Italy
| | - Nako Nakatsuka
- Laboratory
of Biosensors and Bioelectronics, Institute for Biomedical Engineering, ETH Zürich, Zürich CH-8092, Switzerland
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8
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Kamsma TM, Boon WQ, Ter Rele T, Spitoni C, van Roij R. Iontronic Neuromorphic Signaling with Conical Microfluidic Memristors. PHYSICAL REVIEW LETTERS 2023; 130:268401. [PMID: 37450821 DOI: 10.1103/physrevlett.130.268401] [Citation(s) in RCA: 7] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/22/2022] [Accepted: 05/25/2023] [Indexed: 07/18/2023]
Abstract
Experiments have shown that the conductance of conical channels, filled with an aqueous electrolyte, can strongly depend on the history of the applied voltage. These channels hence have a memory and are promising elements in brain-inspired (iontronic) circuits. We show here that the memory of such channels stems from transient concentration polarization over the ionic diffusion time. We derive an analytic approximation for these dynamics which shows good agreement with full finite-element calculations. Using our analytic approximation, we propose an experimentally realizable Hodgkin-Huxley iontronic circuit where micrometer cones take on the role of sodium and potassium channels. Our proposed circuit exhibits key features of neuronal communication such as all-or-none action potentials upon a pulse stimulus and a spike train upon a sustained stimulus.
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Affiliation(s)
- T M Kamsma
- Institute for Theoretical Physics, Utrecht University, Princetonplein 5, 3584 CC Utrecht, Netherlands
- Mathematical Institute, Utrecht University, Budapestlaan 6, 3584 CD Utrecht, Netherlands
| | - W Q Boon
- Institute for Theoretical Physics, Utrecht University, Princetonplein 5, 3584 CC Utrecht, Netherlands
| | - T Ter Rele
- Institute for Theoretical Physics, Utrecht University, Princetonplein 5, 3584 CC Utrecht, Netherlands
- Soft Condensed Matter, Debye Institute for Nanomaterials Science, Utrecht University, Princetonplein 1, 3584 CC Utrecht, Netherlands
| | - C Spitoni
- Mathematical Institute, Utrecht University, Budapestlaan 6, 3584 CD Utrecht, Netherlands
| | - R van Roij
- Institute for Theoretical Physics, Utrecht University, Princetonplein 5, 3584 CC Utrecht, Netherlands
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9
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Vardanyan VH, Wang Q, Kolomeisky AB. Dynamics of single-base editing: Theoretical analysis. J Chem Phys 2023; 158:245101. [PMID: 37347132 PMCID: PMC10908558 DOI: 10.1063/5.0157193] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/05/2023] [Accepted: 06/06/2023] [Indexed: 06/23/2023] Open
Abstract
Recent experimental advances led to the development of DNA base editors (BEs) with single-nucleotide precision, which is critical for future progress in various scientific and technological fields. The molecular mechanisms of single-base discrimination, however, remain poorly understood. Using a recently developed stochastic approach, we theoretically investigated the dynamics of single-base editing. More specifically, transient and mean times to edit "TC" motifs by cytosine BEs are explicitly evaluated for correct (target) and incorrect (bystander) locations on DNA. In addition, the effect of mutations on the dynamics of the single-base edition is also analyzed. It is found that for most ranges of parameters, it is possible to temporarily separate target and bystander products of base editing, supporting the idea of dynamic selectivity as a method of improving the precision of single-base editing. We conclude that to improve the efficiency of single-base editing, selecting the probability or selecting the time requires different strategies. Physical-chemical arguments to explain the observed dynamic properties are presented. The theoretical analysis clarifies some important aspects of the molecular mechanisms of selective base editing.
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Affiliation(s)
| | - Qian Wang
- Hefei National Laboratory for Physical Sciences at the Microscale and Department of Physics, University of Science and Technology of China, Hefei 230026, Anhui, China
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10
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Vardanyan VH, Wang Q, Kolomeisky AB. Dynamics of Single-Base Editing: Theoretical Analysis. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2023:2023.05.08.539865. [PMID: 37215008 PMCID: PMC10197563 DOI: 10.1101/2023.05.08.539865] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/24/2023]
Abstract
Recent experimental advances led to the development of DNA base editors (BEs) with a single-nucleotide precision that is critical for future progress in various scientific and technological fields. The molecular mechanisms of single-base discrimination, however, remain not well understood. Using a recently developed stochastic approach, we theoretically investigated the dynamics of single-base editing. More specifically, transient and mean times to edit "TC" motifs by cytosine BEs are explicitly evaluated for correct (target) and incorrect (bystander) locations on DNA. In addition, the effect of mutations on the dynamics of the single-base edition is also analyzed. It is found that for most ranges of parameters, it is possible to temporarily separate target and bystander products of base editing, supporting the idea of dynamic selectivity as a method of improving the precision of single-base editing. We conclude that to improve the efficiency of single-base editing, selecting the probability or selecting the time requires different strategies. Physical-chemical arguments to explain the observed dynamic properties are presented. The theoretical analysis clarifies some important aspects of molecular mechanisms of selective base editing.
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11
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Zhou S, Xie L, Zhang X, Yan M, Zeng H, Liang K, Jiang L, Kong B. Super-Assembled Multi-Level Asymmetric Mesochannels for Coupled Accelerated Dual-Ion Selective Transport. ADVANCED MATERIALS (DEERFIELD BEACH, FLA.) 2023; 35:e2208903. [PMID: 36434817 DOI: 10.1002/adma.202208903] [Citation(s) in RCA: 12] [Impact Index Per Article: 12.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/27/2022] [Revised: 11/16/2022] [Indexed: 06/16/2023]
Abstract
Asymmetric nanofluidic devices hold great potential in energy conversion applications. However, most of the existing asymmetric nanofluidic devices remain a single-level asymmetric structure and a single-ion selective layer, which results in weak ion selectivity and limited energy conversion efficiency. Herein, a multi-level asymmetric mesoporous carbon/anodized aluminum/mesoporous silica (MC/AAO/MS) nanofluidic device with abundant and ordered mesochannels is constructed from super-assembly strategy. The resultant MC/AAO/MS exhibits diode-like ion transport and outstanding ion storage-release performance. Importantly, MC/AAO/MS couples the MC and MS dual-ion selective layers, which ensures a high ionic conductance and evidently enhances the cation selectivity. Thereby, the MC/AAO/MS demonstrates ascendant salinity gradient energy conversion performance. The power density and conversion efficiency can reach up to 5.37 W m-2 and 32.79%, respectively. Noteworthy, a good energy conversion performance of 63 mW m-2 can still be achieved upon high working area, outperforming 300% of the performance of MC/AAO and MS/AAO single-level asymmetric nanochannels. Theoretical calculation further verifies that the multi-level asymmetric structure and dual-ion selective transport are the reason for the enhanced cation selectivity and energy conversion efficiency. This work opens a new avenue for constructing multi-level asymmetric structured nanofluidic devices for various applications.
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Affiliation(s)
- Shan Zhou
- Collaborative Innovation Center of Chemistry for Energy Materials (iChEM), Department of Chemistry, Laboratory of Advanced Materials, Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, Fudan University, Shanghai, 200433, P. R. China
| | - Lei Xie
- Collaborative Innovation Center of Chemistry for Energy Materials (iChEM), Department of Chemistry, Laboratory of Advanced Materials, Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, Fudan University, Shanghai, 200433, P. R. China
| | - Xin Zhang
- Collaborative Innovation Center of Chemistry for Energy Materials (iChEM), Department of Chemistry, Laboratory of Advanced Materials, Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, Fudan University, Shanghai, 200433, P. R. China
| | - Miao Yan
- Collaborative Innovation Center of Chemistry for Energy Materials (iChEM), Department of Chemistry, Laboratory of Advanced Materials, Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, Fudan University, Shanghai, 200433, P. R. China
| | - Hui Zeng
- Collaborative Innovation Center of Chemistry for Energy Materials (iChEM), Department of Chemistry, Laboratory of Advanced Materials, Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, Fudan University, Shanghai, 200433, P. R. China
| | - Kang Liang
- School of Chemical Engineering and Graduate School of Biomedical Engineering, The University of New South Wales, Sydney, New South Wales, 2052, Australia
| | - Lei Jiang
- CAS Key Laboratory of Bio-Inspired Materials and Interfacial Science, Technical Institute of Physics and Chemistry Chinese Academy of Sciences, Beijing, 100190, P. R. China
| | - Biao Kong
- Collaborative Innovation Center of Chemistry for Energy Materials (iChEM), Department of Chemistry, Laboratory of Advanced Materials, Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, Fudan University, Shanghai, 200433, P. R. China
- Yiwu Research Institute, Fudan University, Yiwu, Zhejiang, 322000, P. R. China
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12
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Xiong T, Li C, He X, Xie B, Zong J, Jiang Y, Ma W, Wu F, Fei J, Yu P, Mao L. Neuromorphic functions with a polyelectrolyte-confined fluidic memristor. Science 2023; 379:156-161. [PMID: 36634194 DOI: 10.1126/science.adc9150] [Citation(s) in RCA: 67] [Impact Index Per Article: 67.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/14/2023]
Abstract
Reproducing ion channel-based neural functions with artificial fluidic systems has long been an aspirational goal for both neuromorphic computing and biomedical applications. In this study, neuromorphic functions were successfully accomplished with a polyelectrolyte-confined fluidic memristor (PFM), in which confined polyelectrolyte-ion interactions contributed to hysteretic ion transport, resulting in ion memory effects. Various electric pulse patterns were emulated by PFM with ultralow energy consumption. The fluidic property of PFM enabled the mimicking of chemical-regulated electric pulses. More importantly, chemical-electric signal transduction was implemented with a single PFM. With its structural similarity to ion channels, PFM is versatile and easily interfaces with biological systems, paving a way to building neuromorphic devices with advanced functions by introducing rich chemical designs.
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Affiliation(s)
- Tianyi Xiong
- Beijing National Laboratory for Molecular Sciences, Key Laboratory of Analytical Chemistry for Living Biosystems, Institute of Chemistry, Chinese Academy of Sciences (CAS), Beijing 100190, China.,School of Chemical Sciences, University of Chinese Academy of Sciences, Beijing 100049, China
| | - Changwei Li
- Beijing National Laboratory for Molecular Sciences, Key Laboratory of Analytical Chemistry for Living Biosystems, Institute of Chemistry, Chinese Academy of Sciences (CAS), Beijing 100190, China.,Key Laboratory of Environmentally Friendly Chemistry and Applications of Ministry of Education, College of Chemistry, Xiangtan University, Xiangtan 411105, China
| | - Xiulan He
- Beijing National Laboratory for Molecular Sciences, Key Laboratory of Analytical Chemistry for Living Biosystems, Institute of Chemistry, Chinese Academy of Sciences (CAS), Beijing 100190, China
| | - Boyang Xie
- Beijing National Laboratory for Molecular Sciences, Key Laboratory of Analytical Chemistry for Living Biosystems, Institute of Chemistry, Chinese Academy of Sciences (CAS), Beijing 100190, China.,School of Chemical Sciences, University of Chinese Academy of Sciences, Beijing 100049, China
| | - Jianwei Zong
- Beijing National Laboratory for Molecular Sciences, Key Laboratory of Analytical Chemistry for Living Biosystems, Institute of Chemistry, Chinese Academy of Sciences (CAS), Beijing 100190, China.,School of Chemical Sciences, University of Chinese Academy of Sciences, Beijing 100049, China
| | - Yanan Jiang
- College of Chemistry, Beijing Normal University, Beijing 100875, China
| | - Wenjie Ma
- Beijing National Laboratory for Molecular Sciences, Key Laboratory of Analytical Chemistry for Living Biosystems, Institute of Chemistry, Chinese Academy of Sciences (CAS), Beijing 100190, China
| | - Fei Wu
- Beijing National Laboratory for Molecular Sciences, Key Laboratory of Analytical Chemistry for Living Biosystems, Institute of Chemistry, Chinese Academy of Sciences (CAS), Beijing 100190, China
| | - Junjie Fei
- Key Laboratory of Environmentally Friendly Chemistry and Applications of Ministry of Education, College of Chemistry, Xiangtan University, Xiangtan 411105, China
| | - Ping Yu
- Beijing National Laboratory for Molecular Sciences, Key Laboratory of Analytical Chemistry for Living Biosystems, Institute of Chemistry, Chinese Academy of Sciences (CAS), Beijing 100190, China.,School of Chemical Sciences, University of Chinese Academy of Sciences, Beijing 100049, China
| | - Lanqun Mao
- Beijing National Laboratory for Molecular Sciences, Key Laboratory of Analytical Chemistry for Living Biosystems, Institute of Chemistry, Chinese Academy of Sciences (CAS), Beijing 100190, China.,College of Chemistry, Beijing Normal University, Beijing 100875, China
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13
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Robin P, Emmerich T, Ismail A, Niguès A, You Y, Nam GH, Keerthi A, Siria A, Geim AK, Radha B, Bocquet L. Long-term memory and synapse-like dynamics in two-dimensional nanofluidic channels. Science 2023; 379:161-167. [PMID: 36634187 DOI: 10.1126/science.adc9931] [Citation(s) in RCA: 57] [Impact Index Per Article: 57.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/14/2023]
Abstract
Fine-tuned ion transport across nanoscale pores is key to many biological processes, including neurotransmission. Recent advances have enabled the confinement of water and ions to two dimensions, unveiling transport properties inaccessible at larger scales and triggering hopes of reproducing the ionic machinery of biological systems. Here we report experiments demonstrating the emergence of memory in the transport of aqueous electrolytes across (sub)nanoscale channels. We unveil two types of nanofluidic memristors depending on channel material and confinement, with memory ranging from minutes to hours. We explain how large time scales could emerge from interfacial processes such as ionic self-assembly or surface adsorption. Such behavior allowed us to implement Hebbian learning with nanofluidic systems. This result lays the foundation for biomimetic computations on aqueous electrolytic chips.
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Affiliation(s)
- P Robin
- Laboratoire de Physique de l'Ecole normale Supérieure, ENS, Université PSL, CNRS, Sorbonne Université, Université de Paris, Paris, France
| | - T Emmerich
- Laboratoire de Physique de l'Ecole normale Supérieure, ENS, Université PSL, CNRS, Sorbonne Université, Université de Paris, Paris, France
| | - A Ismail
- National Graphene Institute, The University of Manchester, Manchester, UK.,Department of Physics and Astronomy, The University of Manchester, Manchester, UK
| | - A Niguès
- Laboratoire de Physique de l'Ecole normale Supérieure, ENS, Université PSL, CNRS, Sorbonne Université, Université de Paris, Paris, France
| | - Y You
- National Graphene Institute, The University of Manchester, Manchester, UK.,Department of Physics and Astronomy, The University of Manchester, Manchester, UK
| | - G-H Nam
- National Graphene Institute, The University of Manchester, Manchester, UK.,Department of Physics and Astronomy, The University of Manchester, Manchester, UK
| | - A Keerthi
- National Graphene Institute, The University of Manchester, Manchester, UK.,Department of Chemistry, The University of Manchester, Manchester, UK
| | - A Siria
- Laboratoire de Physique de l'Ecole normale Supérieure, ENS, Université PSL, CNRS, Sorbonne Université, Université de Paris, Paris, France
| | - A K Geim
- National Graphene Institute, The University of Manchester, Manchester, UK.,Department of Physics and Astronomy, The University of Manchester, Manchester, UK
| | - B Radha
- National Graphene Institute, The University of Manchester, Manchester, UK.,Department of Physics and Astronomy, The University of Manchester, Manchester, UK
| | - L Bocquet
- Laboratoire de Physique de l'Ecole normale Supérieure, ENS, Université PSL, CNRS, Sorbonne Université, Université de Paris, Paris, France
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14
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Ratschow AD, Pandey D, Liebchen B, Bhattacharyya S, Hardt S. Resonant Nanopumps: ac Gate Voltages in Conical Nanopores Induce Directed Electrolyte Flow. PHYSICAL REVIEW LETTERS 2022; 129:264501. [PMID: 36608199 DOI: 10.1103/physrevlett.129.264501] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/15/2022] [Revised: 09/27/2022] [Accepted: 11/10/2022] [Indexed: 06/17/2023]
Abstract
Inducing transport in electrolyte-filled nanopores with dc fields has led to influential applications ranging from nanosensors to DNA sequencing. Here we use the Poisson-Nernst-Planck and Navier-Stokes equations to show that unbiased ac fields can induce comparable directional flows in gated conical nanopores. This flow exclusively occurs at intermediate driving frequencies and hinges on the resonance of two competing timescales, representing space charge development at the ends and in the interior of the pore. We summarize the physics of resonant nanopumping in an analytical model that reproduces the results of numerical simulations. Our findings provide a generic route toward real-time controllable flow patterns, which might find applications in controlling the translocation of small molecules or nanocolloids.
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Affiliation(s)
- Aaron D Ratschow
- Institute for Nano- and Microfluidics, TU Darmstadt, Alarich-Weiss-Straße 10, D-64237 Darmstadt, Germany
| | - Doyel Pandey
- Department of Mathematics, Indian Institute of Technology Kharagpur, Kharagpur, West Bengal, India-721302
| | - Benno Liebchen
- Theory of Soft Matter, Department of Physics, TU Darmstadt, Hochschulstraße 12, D-64289 Darmstadt, Germany
| | - Somnath Bhattacharyya
- Department of Mathematics, Indian Institute of Technology Kharagpur, Kharagpur, West Bengal, India-721302
| | - Steffen Hardt
- Institute for Nano- and Microfluidics, TU Darmstadt, Alarich-Weiss-Straße 10, D-64237 Darmstadt, Germany
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15
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Aarts M, Boon WQ, Cuénod B, Dijkstra M, van Roij R, Alarcon-Llado E. Ion Current Rectification and Long-Range Interference in Conical Silicon Micropores. ACS APPLIED MATERIALS & INTERFACES 2022; 14:56226-56236. [PMID: 36484483 PMCID: PMC9782324 DOI: 10.1021/acsami.2c11467] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 06/28/2022] [Accepted: 11/28/2022] [Indexed: 06/17/2023]
Abstract
Fluidic devices exhibiting ion current rectification (ICR), or ionic diodes, are of broad interest for applications including desalination, energy harvesting, and sensing, among others. For such applications a large conductance is desirable, which can be achieved by simultaneously using thin membranes and wide pores. In this paper we demonstrate ICR in micrometer sized conical channels in a thin silicon membrane with pore diameters comparable to the membrane thickness but both much larger than the electrolyte screening length. We show that for these pores the entrance resistance is key not only to Ohmic conductance around 0 V but also for understanding ICR, both of which we measure experimentally and capture within a single analytic theoretical framework. The only fit parameter in this theory is the membrane surface potential, for which we find that it is voltage dependent and its value is excessively large compared to the literature. From this we infer that surface charge outside the pore strongly contributes to the observed Ohmic conductance and rectification by a different extent. We experimentally verify this hypothesis in a small array of pores and find that ICR vanishes due to pore-pore interactions mediated through the membrane surface, while Ohmic conductance around 0 V remains unaffected. We find that the pore-pore interaction for ICR is set by a long-ranged decay of the concentration which explains the surprising finding that the ICR vanishes for even a sparsely populated array with a pore-pore spacing as large as 7 μm.
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Affiliation(s)
- Mark Aarts
- Center
for Nanophotonics, AMOLF, Science Park 109, 1098 XGAmsterdam, Netherlands
| | - Willem Q. Boon
- Institute
for Theoretical Physics, Utrecht University, Princetonplein 5, 3584 CCUtrecht, Netherlands
| | - Blaise Cuénod
- Center
for Nanophotonics, AMOLF, Science Park 109, 1098 XGAmsterdam, Netherlands
| | - Marjolein Dijkstra
- Soft
Condensed Matter, Debye Institute for Nanomaterials Science, Utrecht University, Princetonplein 1, 3584 CCUtrecht, Netherlands
| | - René van Roij
- Institute
for Theoretical Physics, Utrecht University, Princetonplein 5, 3584 CCUtrecht, Netherlands
| | - Esther Alarcon-Llado
- Center
for Nanophotonics, AMOLF, Science Park 109, 1098 XGAmsterdam, Netherlands
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16
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Chen XC, Zhang H, Liu SH, Zhou Y, Jiang L. Engineering Polymeric Nanofluidic Membranes for Efficient Ionic Transport: Biomimetic Design, Material Construction, and Advanced Functionalities. ACS NANO 2022; 16:17613-17640. [PMID: 36322865 DOI: 10.1021/acsnano.2c07641] [Citation(s) in RCA: 12] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/16/2023]
Abstract
Design elements extracted from biological ion channels guide the engineering of artificial nanofluidic membranes for efficient ionic transport and spawn biomimetic devices with great potential in many cutting-edge areas. In this context, polymeric nanofluidic membranes can be especially attractive because of their inherent flexibility and benign processability, which facilitate massive fabrication and facile device integration for large-scale applications. Herein, the state-of-the-art achievements of polymeric nanofluidic membranes are systematically summarized. Theoretical fundamentals underlying both biological and synthetic ion channels are introduced. The advances of engineering polymeric nanofluidic membranes are then detailed from aspects of structural design, material construction, and chemical functionalization, emphasizing their broad chemical and reticular/topological variety as well as considerable property tunability. After that, this Review expands on examples of evolving these polymeric membranes into macroscopic devices and their potentials in addressing compelling issues in energy conversion and storage systems where efficient ion transport is highly desirable. Finally, a brief outlook on possible future developments in this field is provided.
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Affiliation(s)
- Xia-Chao Chen
- School of Materials Science & Engineering, Zhejiang Sci-Tech University, Hangzhou310018, P. R. China
| | - Hao Zhang
- School of Materials Science & Engineering, Zhejiang Sci-Tech University, Hangzhou310018, P. R. China
| | - Sheng-Hua Liu
- School of Materials Science & Engineering, Zhejiang Sci-Tech University, Hangzhou310018, P. R. China
| | - Yahong Zhou
- CAS Key Laboratory of Bio-inspired Materials and Interfacial Science, Technical Institute of Physics and Chemistry, Chinese Academy of Sciences, Beijing100190, P. R. China
| | - Lei Jiang
- CAS Key Laboratory of Bio-inspired Materials and Interfacial Science, Technical Institute of Physics and Chemistry, Chinese Academy of Sciences, Beijing100190, P. R. China
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17
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Yang J, Tu B, Fang M, Li L, Tang Z. Nanoscale Pore-Pore Coupling Effect on Ion Transport through Ordered Porous Monolayers. ACS NANO 2022; 16:13294-13300. [PMID: 35969205 DOI: 10.1021/acsnano.2c05907] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/15/2023]
Abstract
Distinct from the conventional view that nanopores are considered independent channels for mass transport, recent study on the covalent organic framework (COF)-based monolayers characteristic of an ordered nanopore array exhibits a series of interesting properties originating from the strong interactions between adjacent pores. These interactions are determined to be highly dependent on interpore distance and pose a significant influence on the ion transport, accounting for the exceptional membrane performance including both selectivity and conductance. In this Perspective, we discuss the recently discovered nanoscale pore-pore coupling as well as the exciting features of porous nanostructures. We also look at the challenges and future opportunities of ion transport in ordered porous monolayers in the aspects of both fundamental research and practical use.
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Affiliation(s)
- Jinlei Yang
- CAS Key Laboratory of Nanosystem and Hierarchical Fabrication, CAS Center for Excellence in Nanoscience, National Center for Nanoscience and Technology, Beijing 100190, P. R. China
- University of Chinese Academy of Sciences, Beijing 100049, P. R. China
| | - Bin Tu
- CAS Key Laboratory of Nanosystem and Hierarchical Fabrication, CAS Center for Excellence in Nanoscience, National Center for Nanoscience and Technology, Beijing 100190, P. R. China
- University of Chinese Academy of Sciences, Beijing 100049, P. R. China
| | - Munan Fang
- CAS Key Laboratory of Nanosystem and Hierarchical Fabrication, CAS Center for Excellence in Nanoscience, National Center for Nanoscience and Technology, Beijing 100190, P. R. China
- University of Chinese Academy of Sciences, Beijing 100049, P. R. China
| | - Lianshan Li
- CAS Key Laboratory of Nanosystem and Hierarchical Fabrication, CAS Center for Excellence in Nanoscience, National Center for Nanoscience and Technology, Beijing 100190, P. R. China
- University of Chinese Academy of Sciences, Beijing 100049, P. R. China
| | - Zhiyong Tang
- CAS Key Laboratory of Nanosystem and Hierarchical Fabrication, CAS Center for Excellence in Nanoscience, National Center for Nanoscience and Technology, Beijing 100190, P. R. China
- University of Chinese Academy of Sciences, Beijing 100049, P. R. China
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18
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Xiang F, Dong M, Zhang W, Liang S, Guan W. Modeling pyramidal silicon nanopores with effective ion transport. NANOTECHNOLOGY 2022; 33:485503. [PMID: 36007456 DOI: 10.1088/1361-6528/ac8c9c] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/07/2022] [Accepted: 08/25/2022] [Indexed: 06/15/2023]
Abstract
While the electrical models of the membrane-based solid-state nanopores have been well established, silicon-based pyramidal nanopores cannot apply these models due to two distinctive features. One is its 35.3° half cone angle, which brings additional resistance to the moving ions inside the nanopore. The other is its rectangular entrance, which makes calculating the access conductance challenging. Here, we proposed and validated an effective transport model (ETM) for silicon-based pyramidal nanopores by introducing effective conductivity. The impact of half cone angle can be described equivalently using a reduced diffusion coefficient (effective diffusion coefficient). Because the decrease of diffusion coefficient results in a smaller conductivity, effective conductivity is used for the calculation of bulk conductance in ETM. In the classical model, intrinsic conductivity is used. We used the top-down fabrication method for generating the pyramidal silicon nanopores to test the proposed model. Compared with the large error (≥25% in most cases) when using the classical model, the error of ETM in predicting conductance is less than 15%. We also found that the ETM is applicable when the ratio of excess ion concentration and bulk ion concentration is smaller than 0.2. At last, it is proved that ETM can estimate the tip size of pyramidal silicon nanopore. We believe the ETM would provide an improved method for evaluating the pyramidal silicon nanopores.
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Affiliation(s)
- Feibin Xiang
- Key Laboratory of Microelectronics Devices & Integrated Technology, Institute of Microelectronics, Chinese Academy of Sciences, Beijing 100029, People's Republic of China
- University of Chinese Academy of Sciences, Beijing 100049, People's Republic of China
| | - Ming Dong
- School of Electrical Engineering and Computer Science, Pennsylvania State University, University Park, PA, 16802, United States of America
| | - Wenchang Zhang
- Key Laboratory of Microelectronics Devices & Integrated Technology, Institute of Microelectronics, Chinese Academy of Sciences, Beijing 100029, People's Republic of China
| | - Shengfa Liang
- Key Laboratory of Microelectronics Devices & Integrated Technology, Institute of Microelectronics, Chinese Academy of Sciences, Beijing 100029, People's Republic of China
| | - Weihua Guan
- School of Electrical Engineering and Computer Science, Pennsylvania State University, University Park, PA, 16802, United States of America
- Department of Biomedical Engineering, Pennsylvania State University, University Park, PA, 16802, United States of America
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19
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The Dukhin number as a scaling parameter for selectivity in the infinitely long nanopore limit: Extension to multivalent electrolytes. J Mol Liq 2022. [DOI: 10.1016/j.molliq.2022.119072] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
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20
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Montes de Oca JM, Dhanasekaran J, Córdoba A, Darling SB, de Pablo JJ. Ionic Transport in Electrostatic Janus Membranes. An Explicit Solvent Molecular Dynamic Simulation. ACS NANO 2022; 16:3768-3775. [PMID: 35230815 PMCID: PMC8945361 DOI: 10.1021/acsnano.1c07706] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 09/02/2021] [Accepted: 02/22/2022] [Indexed: 06/14/2023]
Abstract
Janus, or two-sided, charged membranes offer promise as ionic current rectifiers. In such systems, pores consisting of two regions of opposite charge can be used to generate a current from a gradient in salinity. The efficiency of nanoscale Janus pores increases dramatically as their diameter becomes smaller. However, little is known about the underlying transport processes, particularly under experimentally accessible conditions. In this work, we examine the molecular basis for rectification in Janus nanopores using an applied electric field. Molecular simulations with explicit water and ions are used to examine the structure and dynamics of all molecular species in aqueous electrolyte solutions. For several macroscopic observables, the results of such simulations are consistent with experimental observations on asymmetric membranes. Our analysis reveals a number of previously unknown features, including a pronounced local reorientation of water molecules in the pores, and a segregation of ionic species that had not been anticipated by previously reported continuum analyses of Janus pores. Using these insights, a model is proposed for ionic current rectification in which electric leakage at the pore entrance controls net transport.
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Affiliation(s)
- Joan M. Montes de Oca
- Pritzker
School of Molecular Engineering, University
of Chicago, Chicago, Illinois 60637, United States
- Advanced
Materials for Energy-Water Systems (AMEWS) Energy Frontier Research
Center, Argonne National Laboratory, 9700 South Cass Avenue, Lemont, Illinois 60439, United States
| | - Johnson Dhanasekaran
- Pritzker
School of Molecular Engineering, University
of Chicago, Chicago, Illinois 60637, United States
- Advanced
Materials for Energy-Water Systems (AMEWS) Energy Frontier Research
Center, Argonne National Laboratory, 9700 South Cass Avenue, Lemont, Illinois 60439, United States
| | - Andrés Córdoba
- Pritzker
School of Molecular Engineering, University
of Chicago, Chicago, Illinois 60637, United States
- Advanced
Materials for Energy-Water Systems (AMEWS) Energy Frontier Research
Center, Argonne National Laboratory, 9700 South Cass Avenue, Lemont, Illinois 60439, United States
| | - Seth B. Darling
- Pritzker
School of Molecular Engineering, University
of Chicago, Chicago, Illinois 60637, United States
- Advanced
Materials for Energy-Water Systems (AMEWS) Energy Frontier Research
Center, Argonne National Laboratory, 9700 South Cass Avenue, Lemont, Illinois 60439, United States
- Chemical
Sciences and Engineering Division, Argonne
National Laboratory, Lemont, Illinois 60439, United States
| | - Juan J. de Pablo
- Pritzker
School of Molecular Engineering, University
of Chicago, Chicago, Illinois 60637, United States
- Advanced
Materials for Energy-Water Systems (AMEWS) Energy Frontier Research
Center, Argonne National Laboratory, 9700 South Cass Avenue, Lemont, Illinois 60439, United States
- Materials
Science Division, Argonne National Laboratory, Lemont, Illinois 60439, United States
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21
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Xiang F, Zhang W, Yang X, Liang S. Ionic Current Rectification: A Result of the Series Connection of Nanochannels with Different Dukhin Numbers. J Phys Chem B 2022; 126:1779-1786. [DOI: 10.1021/acs.jpcb.1c10017] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Feibin Xiang
- Key Laboratory of Microelectronics Devices & Integrated Technology, Institute of Microelectronics, Chinese Academy of Sciences, Beijing 100029, China
- University of Chinese Academy of Sciences, Beijing 100049, China
| | - Wenchang Zhang
- Key Laboratory of Microelectronics Devices & Integrated Technology, Institute of Microelectronics, Chinese Academy of Sciences, Beijing 100029, China
| | - Xiaonan Yang
- Institute of Intelligent Sensing, Zhengzhou University, Zhengzhou 450001, China
| | - Shengfa Liang
- Key Laboratory of Microelectronics Devices & Integrated Technology, Institute of Microelectronics, Chinese Academy of Sciences, Beijing 100029, China
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22
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Laucirica G, Toimil-Molares ME, Trautmann C, Marmisollé W, Azzaroni O. Nanofluidic osmotic power generators - advanced nanoporous membranes and nanochannels for blue energy harvesting. Chem Sci 2021; 12:12874-12910. [PMID: 34745520 PMCID: PMC8513907 DOI: 10.1039/d1sc03581a] [Citation(s) in RCA: 38] [Impact Index Per Article: 12.7] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/30/2021] [Accepted: 08/25/2021] [Indexed: 01/10/2023] Open
Abstract
The increase of energy demand added to the concern for environmental pollution linked to energy generation based on the combustion of fossil fuels has motivated the study and development of new sustainable ways for energy harvesting. Among the different alternatives, the opportunity to generate energy by exploiting the osmotic pressure difference between water sources of different salinities has attracted considerable attention. It is well-known that this objective can be accomplished by employing ion-selective dense membranes. However, so far, the current state of this technology has shown limited performance which hinders its real application. In this context, advanced nanostructured membranes (nanoporous membranes) with high ion flux and selectivity enabling the enhancement of the output power are perceived as a promising strategy to overcome the existing barriers in this technology. While the utilization of nanoporous membranes for osmotic power generation is a relatively new field and therefore, its application for large-scale production is still uncertain, there have been major developments at the laboratory scale in recent years that demonstrate its huge potential. In this review, we introduce a comprehensive analysis of the main fundamental concepts behind osmotic energy generation and how the utilization of nanoporous membranes with tailored ion transport can be a key to the development of high-efficiency blue energy harvesting systems. Also, the document discusses experimental issues related to the different ways to fabricate this new generation of membranes and the different experimental set-ups for the energy-conversion measurements. We highlight the importance of optimizing the experimental variables through the detailed analysis of the influence on the energy capability of geometrical features related to the nanoporous membranes, surface charge density, concentration gradient, temperature, building block integration, and others. Finally, we summarize some representative studies in up-scaled membranes and discuss the main challenges and perspectives of this emerging field.
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Affiliation(s)
- Gregorio Laucirica
- Instituto de Investigaciones Fisicoquímicas Teóricas y Aplicadas (INIFTA), Departamento de Química, Facultad de Ciencias Exactas, Universidad Nacional de La Plata, CONICET CC 16 Suc. 4 1900 La Plata Argentina http://softmatter.quimica.unlp.edu.ar www.twitter.com/softmatterlab
| | | | - Christina Trautmann
- GSI Helmholtzzentrum für Schwerionenforschung 64291 Darmstadt Germany
- Technische Universität Darmstadt, Materialwissenschaft 64287 Darmstadt Germany
| | - Waldemar Marmisollé
- Instituto de Investigaciones Fisicoquímicas Teóricas y Aplicadas (INIFTA), Departamento de Química, Facultad de Ciencias Exactas, Universidad Nacional de La Plata, CONICET CC 16 Suc. 4 1900 La Plata Argentina http://softmatter.quimica.unlp.edu.ar www.twitter.com/softmatterlab
| | - Omar Azzaroni
- Instituto de Investigaciones Fisicoquímicas Teóricas y Aplicadas (INIFTA), Departamento de Química, Facultad de Ciencias Exactas, Universidad Nacional de La Plata, CONICET CC 16 Suc. 4 1900 La Plata Argentina http://softmatter.quimica.unlp.edu.ar www.twitter.com/softmatterlab
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23
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Space charge modulation and ion current rectification of a cylindrical nanopore functionalized with polyelectrolyte brushes subject to an applied pH-gradient. J Colloid Interface Sci 2021; 605:571-581. [PMID: 34340041 DOI: 10.1016/j.jcis.2021.07.120] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/17/2021] [Revised: 07/21/2021] [Accepted: 07/22/2021] [Indexed: 01/18/2023]
Abstract
Considering versatile potential applications of bioinspired membranes, we simulate the electrokinetic behavior of a cylindrical nanopore, surface modified by a polyelectrolyte (PE) layer. Taking account of the effect of electroosmotic flow and an additionally applied pH gradient, the influences of the strength of the pH gradient, the PE layer thickness, the length of the nanopore and its radius on its conductance and ion current rectification (ICR) performance are assessed. We show that if pHU (the pH at the higher pH end of the nanopore) is fixed at 11 and pHL (the pH at the lower pH end of the nanopore) varies from 3 to 11, the rectification factor Rf has a local maximum occurring in 6 < pHL <8; the greater the magnitude of the applied potential bias |V| the smaller the pHL at which the local maximum occurs. The influence of the PE layer thickness on the nanopore rectification performance is important only if 5 < pHL <8, and the optimum performance is reached at a medium thick PE layer (ca. 3 nm). Possible mechanisms associated with the ion transport phenomenon under consideration are proposed and discussed in detail.
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24
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Fertig D, Sarkadi Z, Valiskó M, Boda D. Scaling for rectification of bipolar nanopores as a function of a modified Dukhin number: the case of 1:1 electrolytes. MOLECULAR SIMULATION 2021. [DOI: 10.1080/08927022.2021.1939330] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
Affiliation(s)
- Dávid Fertig
- Center for Natural Sciences, University of Pannonia, Veszprém, Hungary
| | - Zsófia Sarkadi
- Center for Natural Sciences, University of Pannonia, Veszprém, Hungary
| | - Mónika Valiskó
- Center for Natural Sciences, University of Pannonia, Veszprém, Hungary
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25
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Oh MA, Shin CI, Kim M, Kim J, Kang CM, Han SH, Sun JY, Oh SS, Kim YR, Chung TD. Inverted Ion Current Rectification-Based Chemical Delivery Probes for Stimulation of Neurons. ACS APPLIED MATERIALS & INTERFACES 2021; 13:26748-26758. [PMID: 34078075 DOI: 10.1021/acsami.1c04949] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/12/2023]
Abstract
Ion current rectification (ICR), diodelike behavior in surface-charged nanopores, shows promise in the design of delivery probes for manipulation of neural networks as it can solve diffusive leakages that might be critical in clinical and research applications. However, it has not been achieved because ICR has restrictions in nanosized dimension and low electrolyte concentration, and rectification direction is inappropriate for delivery. Herein, we present a polyelectrolyte gel-filled (PGF) micropipette harnessing inverted ICR as a delivery probe, which quantitatively transports glutamate to stimulate primary cultured neurons with high efficiency while minimizing leakages. Since the gel works as an ensemble of numerous surface-charged nanopores, the current is rectified in the micro-opening and physiological environment. By extending the charge-selective region using the gel, inverted ICR is generated, which drives outward deliveries of major charge carriers. This study will help in exploring new aspects of ICR and broaden its applications for advanced chemical delivery.
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Affiliation(s)
- Min-Ah Oh
- Department of Chemistry, Seoul National University, 08826 Seoul, Republic of Korea
| | - Chang Il Shin
- Department of Chemistry, Seoul National University, 08826 Seoul, Republic of Korea
| | - Moonjoo Kim
- Department of Chemistry, Seoul National University, 08826 Seoul, Republic of Korea
| | - Jayol Kim
- Department of Chemistry, Seoul National University, 08826 Seoul, Republic of Korea
| | - Chung Mu Kang
- Electrochemistry Laboratory, Advanced Institutes of Convergence Technology, 16229 Suwon-Si, Gyeonggi-do, Republic of Korea
| | - Seok Hee Han
- Department of Chemistry, Seoul National University, 08826 Seoul, Republic of Korea
| | - Jeong-Yun Sun
- Department of Materials Science & Engineering, Seoul National University, 08826 Seoul, Republic of Korea
- Research Institute of Advanced Materials, Seoul National University, 08826 Seoul, Republic of Korea
| | - Seung Soo Oh
- Department of Materials Science and Engineering, Pohang University of Science and Technology, 37673 Pohang, Gyeongbuk, South Korea
| | - Yang-Rae Kim
- Department of Chemistry, Kwangwoon University, Seoul 01897, Republic of Korea
| | - Taek Dong Chung
- Department of Chemistry, Seoul National University, 08826 Seoul, Republic of Korea
- Electrochemistry Laboratory, Advanced Institutes of Convergence Technology, 16229 Suwon-Si, Gyeonggi-do, Republic of Korea
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26
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Marion S, Vučemilović-Alagić N, Špadina M, Radenović A, Smith AS. From Water Solutions to Ionic Liquids with Solid State Nanopores as a Perspective to Study Transport and Translocation Phenomena. SMALL (WEINHEIM AN DER BERGSTRASSE, GERMANY) 2021; 17:e2100777. [PMID: 33955694 DOI: 10.1002/smll.202100777] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/05/2021] [Revised: 04/01/2021] [Indexed: 06/12/2023]
Abstract
Solid state nanopores are single-molecular devices governed by nanoscale physics with a broad potential for technological applications. However, the control of translocation speed in these systems is still limited. Ionic liquids are molten salts which are commonly used as alternate solvents enabling the regulation of the chemical and physical interactions on solid-liquid interfaces. While their combination can be challenging to the understanding of nanoscopic processes, there has been limited attempts on bringing these two together. While summarizing the state of the art and open questions in these fields, several major advances are presented with a perspective on the next steps in the investigations of ionic-liquid filled nanopores, both from a theoretical and experimental standpoint. By analogy to aqueous solutions, it is argued that ionic liquids and nanopores can be combined to provide new nanofluidic functionalities, as well as to help resolve some of the pertinent problems in understanding transport phenomena in confined ionic liquids and providing better control of the speed of translocating analytes.
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Affiliation(s)
- Sanjin Marion
- Laboratory of Nanoscale Biology, Institute of Bioengineering, School of Engineering, EPFL, 1015, Lausanne, Switzerland
| | - Nataša Vučemilović-Alagić
- Group for Computational Life Sciences, Ruđer Bošković Institute, Division of Physical Chemistry, 10000, Zagreb, Croatia
- PULS Group, Physics Department, Interdisciplinary Center for Nanostructured Films, FAU Erlangen-Nürnberg, 91058, Erlangen, Germany
| | - Mario Špadina
- Group for Computational Life Sciences, Ruđer Bošković Institute, Division of Physical Chemistry, 10000, Zagreb, Croatia
| | - Aleksandra Radenović
- Laboratory of Nanoscale Biology, Institute of Bioengineering, School of Engineering, EPFL, 1015, Lausanne, Switzerland
| | - Ana-Sunčana Smith
- Group for Computational Life Sciences, Ruđer Bošković Institute, Division of Physical Chemistry, 10000, Zagreb, Croatia
- PULS Group, Physics Department, Interdisciplinary Center for Nanostructured Films, FAU Erlangen-Nürnberg, 91058, Erlangen, Germany
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Sarkadi Z, Fertig D, Ható Z, Valiskó M, Boda D. From nanotubes to nanoholes: Scaling of selectivity in uniformly charged nanopores through the Dukhin number for 1:1 electrolytes. J Chem Phys 2021; 154:154704. [PMID: 33887923 DOI: 10.1063/5.0040593] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/23/2023] Open
Abstract
Scaling of the behavior of a nanodevice means that the device function (selectivity) is a unique smooth and monotonic function of a scaling parameter that is an appropriate combination of the system's parameters. For the uniformly charged cylindrical nanopore studied here, these parameters are the electrolyte concentration, c, voltage, U, the radius and the length of the nanopore, R and H, and the surface charge density on the nanopore's surface, σ. Due to the non-linear dependence of selectivities on these parameters, scaling can only be applied in certain limits. We show that the Dukhin number, Du=|σ|/eRc∼|σ|λD 2/eR (λD is the Debye length), is an appropriate scaling parameter in the nanotube limit (H → ∞). Decreasing the length of the nanopore, namely, approaching the nanohole limit (H → 0), an alternative scaling parameter has been obtained, which contains the pore length and is called the modified Dukhin number: mDu ∼ Du H/λD ∼ |σ|λDH/eR. We found that the reason for non-linearity is that the double layers accumulating at the pore wall in the radial dimension correlate with the double layers accumulating at the entrances of the pore near the membrane on the two sides. Our modeling study using the Local Equilibrium Monte Carlo method and the Poisson-Nernst-Planck theory provides concentration, flux, and selectivity profiles that show whether the surface or the volume conduction dominates in a given region of the nanopore for a given combination of the variables. We propose that the inflection point of the scaling curve may be used to characterize the transition point between the surface and volume conductions.
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Affiliation(s)
- Zsófia Sarkadi
- Center for Natural Sciences, University of Pannonia, P.O. Box 158, H-8201 Veszprém, Hungary
| | - Dávid Fertig
- Center for Natural Sciences, University of Pannonia, P.O. Box 158, H-8201 Veszprém, Hungary
| | - Zoltán Ható
- Center for Natural Sciences, University of Pannonia, P.O. Box 158, H-8201 Veszprém, Hungary
| | - Mónika Valiskó
- Center for Natural Sciences, University of Pannonia, P.O. Box 158, H-8201 Veszprém, Hungary
| | - Dezső Boda
- Center for Natural Sciences, University of Pannonia, P.O. Box 158, H-8201 Veszprém, Hungary
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28
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Marion S, Macha M, Davis SJ, Chernev A, Radenovic A. Wetting of nanopores probed with pressure. Phys Chem Chem Phys 2021; 23:4975-4987. [PMID: 33621304 DOI: 10.1039/d1cp00253h] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Nanopores are both a tool to study single-molecule biophysics and nanoscale ion transport, but also a promising material for desalination or osmotic power generation. Understanding the physics underlying ion transport through nano-sized pores allows better design of porous membrane materials. Material surfaces can present hydrophobicity, a property which can make them prone to formation of surface nanobubbles. Nanobubbles can influence the electrical transport properties of such devices. We demonstrate an approach which uses hydraulic pressure to probe the electrical transport properties of solid state nanopores. We show how pressure can be used to wet pores, and how it allows control over bubbles or other contaminants in the nanometer scale range normally unachievable using only an electrical driving force. Molybdenum disulfide is then used as a typical example of a 2D material on which we demonstrate wetting and bubble induced nonlinear and linear conductance in the regimes typically used with these experiments. We show that by using pressure one can identify and evade wetting artifacts.
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Affiliation(s)
- Sanjin Marion
- Laboratory of Nanoscale Biology, Institute of Bioengineering, School of Engineering, EPFL, 1015 Lausanne, Switzerland.
| | - Michal Macha
- Laboratory of Nanoscale Biology, Institute of Bioengineering, School of Engineering, EPFL, 1015 Lausanne, Switzerland.
| | - Sebastian J Davis
- Laboratory of Nanoscale Biology, Institute of Bioengineering, School of Engineering, EPFL, 1015 Lausanne, Switzerland.
| | - Andrey Chernev
- Laboratory of Nanoscale Biology, Institute of Bioengineering, School of Engineering, EPFL, 1015 Lausanne, Switzerland.
| | - Aleksandra Radenovic
- Laboratory of Nanoscale Biology, Institute of Bioengineering, School of Engineering, EPFL, 1015 Lausanne, Switzerland.
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29
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Davis SJ, Macha M, Chernev A, Huang DM, Radenovic A, Marion S. Pressure-Induced Enlargement and Ionic Current Rectification in Symmetric Nanopores. NANO LETTERS 2020; 20:8089-8095. [PMID: 33048551 DOI: 10.1021/acs.nanolett.0c03083] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/11/2023]
Abstract
Nanopores in solid state membranes are a tool able to probe nanofluidic phenomena or can act as a single molecular sensor. They also have diverse applications in filtration, desalination, or osmotic power generation. Many of these applications involve chemical, or hydrostatic pressure differences which act on both the supporting membrane, and the ion transport through the pore. By using pressure differences between the sides of the membrane and an alternating current approach to probe ion transport, we investigate two distinct physical phenomena: the elastic deformation of the membrane through the measurement of strain at the nanopore, and the growth of ionic current rectification with pressure due to pore entrance effects. These measurements are a significant step toward the understanding of the role of elastic membrane deformation or fluid flow on linear and nonlinear transport properties of nanopores.
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Affiliation(s)
- Sebastian J Davis
- Laboratory of Nanoscale Biology, Institute of Bioengineering, School of Engineering, EPFL, 1015 Lausanne, Switzerland
| | - Michal Macha
- Laboratory of Nanoscale Biology, Institute of Bioengineering, School of Engineering, EPFL, 1015 Lausanne, Switzerland
| | - Andrey Chernev
- Laboratory of Nanoscale Biology, Institute of Bioengineering, School of Engineering, EPFL, 1015 Lausanne, Switzerland
| | - David M Huang
- Department of Chemistry, School of Physical Sciences, The University of Adelaide, Adelaide 5005, Australia
| | - Aleksandra Radenovic
- Laboratory of Nanoscale Biology, Institute of Bioengineering, School of Engineering, EPFL, 1015 Lausanne, Switzerland
| | - Sanjin Marion
- Laboratory of Nanoscale Biology, Institute of Bioengineering, School of Engineering, EPFL, 1015 Lausanne, Switzerland
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30
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Caglar M, Silkina I, Brown BT, Thorneywork AL, Burton OJ, Babenko V, Gilbert SM, Zettl A, Hofmann S, Keyser UF. Tunable Anion-Selective Transport through Monolayer Graphene and Hexagonal Boron Nitride. ACS NANO 2020; 14:2729-2738. [PMID: 31891480 PMCID: PMC7098055 DOI: 10.1021/acsnano.9b08168] [Citation(s) in RCA: 21] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/16/2019] [Accepted: 12/31/2019] [Indexed: 05/23/2023]
Abstract
Membranes that selectively filter for both anions and cations are central to technological applications from clean energy generation to desalination devices. 2D materials have immense potential as these ion-selective membranes due to their thinness, mechanical strength, and tunable surface chemistry; however, currently, only cation-selective membranes have been reported. Here we demonstrate the controllable cation and anion selectivity of both monolayer graphene and hexagonal boron nitride. In particular, we measure the ionic current through membranes grown by chemical vapor deposition containing well-known defects inherent to scalably produced and wet-transferred 2D materials. We observe a striking change from cation selectivity with monovalent ions to anion selectivity by controlling the concentration of multivalent ions and inducing charge inversion on the 2D membrane. Furthermore, we find good agreement between our experimental data and theoretical predictions from the Goldman-Hodgkin-Katz equation and use this model to extract selectivity ratios. These tunable selective membranes conduct up to 500 anions for each cation and thus show potential for osmotic power generation.
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Affiliation(s)
- Mustafa Caglar
- Cavendish
Laboratory, University of Cambridge, J.J. Thomson Avenue, Cambridge CB3 0HE, United Kingdom
| | - Inese Silkina
- Department
of Materials Science and Metallurgy, University
of Cambridge, Cambridge CB3 0FS, United Kingdom
| | - Bertram T. Brown
- Cavendish
Laboratory, University of Cambridge, J.J. Thomson Avenue, Cambridge CB3 0HE, United Kingdom
| | - Alice L. Thorneywork
- Cavendish
Laboratory, University of Cambridge, J.J. Thomson Avenue, Cambridge CB3 0HE, United Kingdom
| | - Oliver J. Burton
- Department
of Engineering, University of Cambridge, Cambridge CB3 0FA, United Kingdom
| | - Vitaliy Babenko
- Department
of Engineering, University of Cambridge, Cambridge CB3 0FA, United Kingdom
| | - Stephen Matthew Gilbert
- Department
of Physics, University of California, Berkeley, Berkeley, California 94720, United States
- Materials
Sciences Division, Lawrence Berkeley National
Laboratory, Berkeley, California 94720, United States
- Kavli Energy
NanoScience Institute at the University of California, Berkeley and
the Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States
| | - Alex Zettl
- Department
of Physics, University of California, Berkeley, Berkeley, California 94720, United States
- Materials
Sciences Division, Lawrence Berkeley National
Laboratory, Berkeley, California 94720, United States
- Kavli Energy
NanoScience Institute at the University of California, Berkeley and
the Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States
| | - Stephan Hofmann
- Department
of Engineering, University of Cambridge, Cambridge CB3 0FA, United Kingdom
| | - Ulrich F. Keyser
- Cavendish
Laboratory, University of Cambridge, J.J. Thomson Avenue, Cambridge CB3 0HE, United Kingdom
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31
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Lin CY, Ma T, Siwy ZS, Balme S, Hsu JP. Tunable Current Rectification and Selectivity Demonstrated in Nanofluidic Diodes through Kinetic Functionalization. J Phys Chem Lett 2020; 11:60-66. [PMID: 31814408 DOI: 10.1021/acs.jpclett.9b03344] [Citation(s) in RCA: 24] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/10/2023]
Abstract
The possibility of tuning the current rectification and selectivity in nanofluidic diodes is demonstrated both experimentally and theoretically through dynamically functionalizing a conical nanopore with poly-l-lysine. We identified an optimum functionalization time equivalent to optimum modification depth that assures the highest rectification degrees. Results showed that the functionalization time-dependent rectification behavior of nanofluidic diodes is dominated by the properties of current at positive voltages that in our electrode configuration indicate the "on" state of the diode and accumulation of ions in the nanopore. The functionalization time also tunes the ion selectivity of the diode. If the functionalization time is sufficiently short, an unusual depletion of counterions near the bipolar interface results in a cation-selective nanopore. However, a further increase in the duration of functionalization renders a nanopore that is an anion-selective nanopore. The dynamic functionalization presented in this Letter enables tuning ion selectivity of nanopores.
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Affiliation(s)
- Chih-Yuan Lin
- Department of Physics and Astronomy , University of California , Irvine , California 92697 , United States
- Department of Chemical Engineering , National Taiwan University , Taipei 10617 , Taiwan
| | - Tianji Ma
- Institut Européen des Membranes , UMR5635 UM ENSCM CNRS, Place Eugène Bataillon , 34095 Montpellier Cedex 5, France
| | - Zuzanna S Siwy
- Department of Physics and Astronomy , University of California , Irvine , California 92697 , United States
- Department of Chemistry , University of California , Irvine , California 92697 , United States
- Department of Biomedical Engineering , University of California , Irvine , California 92697 , United States
| | - Sébastien Balme
- Institut Européen des Membranes , UMR5635 UM ENSCM CNRS, Place Eugène Bataillon , 34095 Montpellier Cedex 5, France
| | - Jyh-Ping Hsu
- Department of Chemical Engineering , National Taiwan University , Taipei 10617 , Taiwan
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32
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Zhang Z, Huang X, Qian Y, Chen W, Wen L, Jiang L. Engineering Smart Nanofluidic Systems for Artificial Ion Channels and Ion Pumps: From Single-Pore to Multichannel Membranes. ADVANCED MATERIALS (DEERFIELD BEACH, FLA.) 2020; 32:e1904351. [PMID: 31793736 DOI: 10.1002/adma.201904351] [Citation(s) in RCA: 63] [Impact Index Per Article: 15.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/08/2019] [Revised: 09/26/2019] [Indexed: 06/10/2023]
Abstract
Biological ion channels and ion pumps with intricate ion transport functions widely exist in living organisms and play irreplaceable roles in almost all physiological functions. Nanofluidics provides exciting opportunities to mimic these working processes, which not only helps understand ion transport in biological systems but also paves the way for the applications of artificial devices in many valuable areas. Recent progress in the engineering of smart nanofluidic systems for artificial ion channels and ion pumps is summarized. The artificial systems range from chemically and structurally diverse lipid-membrane-based nanopores to robust and scalable solid-state nanopores. A generic strategy of gate location design is proposed. The single-pore-based platform concept can be rationally extended into multichannel membrane systems and shows unprecedented potential in many application areas, such as single-molecule analysis, smart mass delivery, and energy conversion. Finally, some present underpinning issues that need to be addressed are discussed.
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Affiliation(s)
- Zhen Zhang
- Key Laboratory of Bio-inspired Materials and Interfacial Science, Technical Institute of Physics and Chemistry, Chinese Academy of Sciences, Beijing, 100190, P. R. China
- Beijing National Laboratory for Molecular Sciences (BNLMS), Key Laboratory of Green Printing, Institute of Chemistry, Chinese Academy of Sciences, Beijing, 100190, P. R. China
- School of Future Technology, University of Chinese Academy of Sciences, Beijing, 100049, P. R. China
| | - Xiaodong Huang
- Key Laboratory of Bio-inspired Materials and Interfacial Science, Technical Institute of Physics and Chemistry, Chinese Academy of Sciences, Beijing, 100190, P. R. China
- School of Future Technology, University of Chinese Academy of Sciences, Beijing, 100049, P. R. China
| | - Yongchao Qian
- Key Laboratory of Bio-inspired Materials and Interfacial Science, Technical Institute of Physics and Chemistry, Chinese Academy of Sciences, Beijing, 100190, P. R. China
| | - Weipeng Chen
- Key Laboratory of Bio-inspired Materials and Interfacial Science, Technical Institute of Physics and Chemistry, Chinese Academy of Sciences, Beijing, 100190, P. R. China
- School of Future Technology, University of Chinese Academy of Sciences, Beijing, 100049, P. R. China
| | - Liping Wen
- Key Laboratory of Bio-inspired Materials and Interfacial Science, Technical Institute of Physics and Chemistry, Chinese Academy of Sciences, Beijing, 100190, P. R. China
- School of Future Technology, University of Chinese Academy of Sciences, Beijing, 100049, P. R. China
| | - Lei Jiang
- Key Laboratory of Bio-inspired Materials and Interfacial Science, Technical Institute of Physics and Chemistry, Chinese Academy of Sciences, Beijing, 100190, P. R. China
- School of Future Technology, University of Chinese Academy of Sciences, Beijing, 100049, P. R. China
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33
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Knowles SF, Keyser UF, Thorneywork AL. Noise properties of rectifying and non-rectifying nanopores. NANOTECHNOLOGY 2019; 31:10LT01. [PMID: 31770739 DOI: 10.1088/1361-6528/ab5be3] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/10/2023]
Abstract
Achieving a full understanding of the noise in resistive pulse sensing experiments is central to the development of this important single molecule technique. Here, we present a comprehensive study of the noise properties of conical glass nanopores as components in an ionic circuit by studying the power spectral density of the system in salt solutions at a range of concentrations. We begin by investigating the ionic current rectification of the pores, showing that it is only observed above a critical Dukhin number in agreement with theoretical predictions. We then investigate the noise properties of the pores and demonstrate that the fluctuations in the ionic current at no applied potential difference can be well modelled over four decades of frequency as thermal fluctuations over a complex impedance. Finally, we show that-when an ionic current flows-1/f noise dominates the power spectrum below ∼100 Hz. Fluctuations in the surface current govern the low-frequency 1/f noise, with the asymmetric shape of the pore leading the magnitude to scale with [Formula: see text], faster than predicted by Hooge's empirical relation.
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Affiliation(s)
- S F Knowles
- Cavendish Laboratory, University of Cambridge, JJ Thomson Avenue, Cambridge CB3 0HE, United Kingdom
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34
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Xiong T, Zhang K, Jiang Y, Yu P, Mao L. Ion current rectification: from nanoscale to microscale. Sci China Chem 2019. [DOI: 10.1007/s11426-019-9526-4] [Citation(s) in RCA: 16] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
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35
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Dal Cengio S, Pagonabarraga I. Confinement-controlled rectification in a geometric nanofluidic diode. J Chem Phys 2019; 151:044707. [PMID: 31370530 DOI: 10.1063/1.5108723] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022] Open
Abstract
Recent experiments with electrolytes driven through conical nanopores give evidence of strong rectified current response. In such devices, the asymmetry in the confinement is responsible for the non-Ohmic response, suggesting that the interplay of entropic and enthalpic forces plays a major role. Here, we propose a theoretical model to shed light on the physical mechanism underlying ionic current rectification. By use of an effective description of the ionic dynamics, we explore the system's response in different electrostatic regimes. We show that the rectification efficiency, as well as the channel selectivity, is driven by the surface-to-bulk conductivity ratio Dukhin length rather than the electrical double layer overlap.
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Affiliation(s)
- S Dal Cengio
- Department of Condensed Matter, Universitat de Barcelona, Martí i Franqués 1, 08028 Barcelona, Spain
| | - I Pagonabarraga
- Department of Condensed Matter, Universitat de Barcelona, Martí i Franqués 1, 08028 Barcelona, Spain
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36
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Marbach S, Bocquet L. Osmosis, from molecular insights to large-scale applications. Chem Soc Rev 2019; 48:3102-3144. [PMID: 31114820 DOI: 10.1039/c8cs00420j] [Citation(s) in RCA: 107] [Impact Index Per Article: 21.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
Abstract
Osmosis is a universal phenomenon occurring in a broad variety of processes and fields. It is the archetype of entropic forces, both trivial in its fundamental expression - the van 't Hoff perfect gas law - and highly subtle in its physical roots. While osmosis is intimately linked with transport across membranes, it also manifests itself as an interfacial transport phenomenon: the so-called diffusio-osmosis and -phoresis, whose consequences are presently actively explored for example for the manipulation of colloidal suspensions or the development of active colloidal swimmers. Here we give a global and unifying view of the phenomenon of osmosis and its consequences with a multi-disciplinary perspective. Pushing the fundamental understanding of osmosis allows one to propose new perspectives for different fields and we highlight a number of examples along these lines, for example introducing the concepts of osmotic diodes, active separation and far from equilibrium osmosis, raising in turn fundamental questions in the thermodynamics of separation. The applications of osmosis are also obviously considerable and span very diverse fields. Here we discuss a selection of phenomena and applications where osmosis shows great promises: osmotic phenomena in membrane science (with recent developments in separation, desalination, reverse osmosis for water purification thanks in particular to the emergence of new nanomaterials); applications in biology and health (in particular discussing the kidney filtration process); osmosis and energy harvesting (in particular, osmotic power and blue energy as well as capacitive mixing); applications in detergency and cleaning, as well as for oil recovery in porous media.
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Affiliation(s)
- Sophie Marbach
- Laboratoire de Physique de l'Ecole Normale Supérieure, ENS, Université PSL, CNRS, Sorbonne Université, Université Paris-Diderot, Sorbonne Paris Cité, Paris, France.
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