1
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Vidhani DV, Ubeda R, Sautie T, Vidhani D, Mariappan M. Zwitterionic Bergman cyclization triggered polymerization gives access to metal-graphene nanoribbons using a boron metal couple. Commun Chem 2023; 6:66. [PMID: 37029210 PMCID: PMC10082089 DOI: 10.1038/s42004-023-00866-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/02/2022] [Accepted: 03/24/2023] [Indexed: 04/09/2023] Open
Abstract
With the rapid growth in artificial intelligence, designing high-speed and low-power semiconducting materials is of utmost importance. This investigation provides a theoretical basis to access covalently bonded transition metal-graphene nanoribbon (TM-GNR) hybrid semiconductors whose DFT-computed bandgaps were much narrower than the commonly used pentacene. Systematic optimization of substrates containing remotely placed boryl groups and the transition metals produced the zwitterions via ionic Bergman cyclization (i-BC) and unlocked the polymerization of metal-substituted polyenynes. Aside from i-BC, the subsequent steps were barrierless, which involved structureless transition regions. Multivariate analysis revealed the strong dependence of activation energy and the cyclization mode on the electronic nature of boron and Au(I). Consequently, three regions corresponding to radical Bergman (r-BC), ionic Bergman (i-BC), and ionic Schreiner-Pascal (i-SP) cyclizations were identified. The boundaries between these regions corresponded to the mechanistic shift induced by the three-center-three-electron (3c-3e) hydrogen bond, three-center-four-electron (3c-4e) hydrogen bond, and vacant p-orbital on boron. The ideal combination for cascade polymerization was observed near the boundary between i-BC and i-SP.
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Affiliation(s)
- Dinesh V Vidhani
- Department of Math & Natural Science, Miami Dade College, Miami Dade College, 627 SW 27th Ave, Miami, FL, 33135, USA.
| | - Rosemary Ubeda
- Department of Math & Natural Science, Miami Dade College, Miami Dade College, 627 SW 27th Ave, Miami, FL, 33135, USA
| | - Thalia Sautie
- Department of Math & Natural Science, Miami Dade College, Miami Dade College, 627 SW 27th Ave, Miami, FL, 33135, USA
| | - Diana Vidhani
- Miami Dade Virtual School, 560 NW 151st, Miami, FL, 33169, USA
| | - Manoharan Mariappan
- Department of Natural Science North Florida College, 325 Turner Davis Dr, Madison, FL, 32340, USA
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2
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Morales P, Muller C, Jagerovic N, Reggio PH. Targeting CB2 and TRPV1: Computational Approaches for the Identification of Dual Modulators. Front Mol Biosci 2022; 9:841190. [PMID: 35281260 PMCID: PMC8914543 DOI: 10.3389/fmolb.2022.841190] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/22/2021] [Accepted: 02/03/2022] [Indexed: 11/13/2022] Open
Abstract
Both metabotropic (CBRs) and ionotropic cannabinoid receptors (ICRs) have implications in a range of neurological disorders. The metabotropic canonical CBRs CB1 and CB2 are highly implicated in these pathological events. However, selective targeting at CB2 versus CB1 offers optimized pharmacology due to the absence of psychoactive outcomes. The ICR transient receptor potential vanilloid type 1 (TRPV1) has also been reported to play a role in CNS disorders. Thus, activation of both targets, CB2 and TRPV1, offers a promising polypharmacological strategy for the treatment of neurological events including analgesia and neuroprotection. This brief research report aims to identify chemotypes with a potential dual CB2/TRPV1 profile. For this purpose, we have rationalized key structural features for activation and performed virtual screening at both targets using curated chemical libraries.
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Affiliation(s)
- Paula Morales
- Medicinal Chemistry Institute, Spanish National Research Council, Madrid, Spain
| | - Chanté Muller
- Department of Chemistry and Biochemistry, University of North Carolina at Greensboro, Greensboro, NC, United States
| | - Nadine Jagerovic
- Medicinal Chemistry Institute, Spanish National Research Council, Madrid, Spain
| | - Patricia H. Reggio
- Department of Chemistry and Biochemistry, University of North Carolina at Greensboro, Greensboro, NC, United States
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3
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Feofanov M, Akhmetov V, Amsharov K. Domino Dehydrative π-Extension: A Facile Path to Extended Perylenes and Terrylenes. Chemistry 2021; 27:17322-17325. [PMID: 34553791 PMCID: PMC9299636 DOI: 10.1002/chem.202103098] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/31/2021] [Indexed: 11/29/2022]
Abstract
Herein, we report a new method for synthesis of extended perylenes and terrylenes. The technique is based on the cascade dehydrative π-extensions (DPEX) of aryl aldehydes, in which stepwise annulations activate previously "dormant" substituents. Two- and fourfold cyclizations of 3-aryl-biphenyl-2,2'-dicarbaldehydes offer a rapid path to unsymmetrical perylenes and elusive terrylene derivatives, respectively. DPEX of 3,3''-(phenanthrene-1,8-diyl)bis (([1,1'-biphenyl]-2,2'-dicarbaldehyde)) leads to the biradical structure, which proceeds in situ into oxidative electrocyclization at room temperature. The described domino process complements and expands DPEX approach to a large family of fused acenes and related PAHs.
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Affiliation(s)
- Mikhail Feofanov
- Department of Chemistry and Pharmacy, Organic Chemistry IINikolaus-Fiebiger Str. 1091058ErlangenGermany
- Institute of ChemistryOrganic ChemistryMartin-Luther-University Halle-WittenbergKurt-Mothes-Strasse 206120Halle (Saale)Germany
| | - Vladimir Akhmetov
- Institute of ChemistryOrganic ChemistryMartin-Luther-University Halle-WittenbergKurt-Mothes-Strasse 206120Halle (Saale)Germany
| | - Konstantin Amsharov
- Department of Chemistry and Pharmacy, Organic Chemistry IINikolaus-Fiebiger Str. 1091058ErlangenGermany
- Institute of ChemistryOrganic ChemistryMartin-Luther-University Halle-WittenbergKurt-Mothes-Strasse 206120Halle (Saale)Germany
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4
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Liao J, Yang X, Ouyang L, Lai Y, Huang J, Luo R. Recent advances in cascade radical cyclization of radical acceptors for the synthesis of carbo- and heterocycles. Org Chem Front 2021. [DOI: 10.1039/d0qo01453b] [Citation(s) in RCA: 33] [Impact Index Per Article: 8.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/06/2023]
Abstract
This review is devoted to highlighting main achievements in the development of cascade radical cyclization of radical acceptors for the synthesis of carbo- and heterocycles.
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Affiliation(s)
- Jianhua Liao
- School of Pharmaceutical Sciences
- Gannan Medical University
- Ganzhou
- P. R. China
| | - Xiao Yang
- School of Pharmaceutical Sciences
- Gannan Medical University
- Ganzhou
- P. R. China
| | - Lu Ouyang
- School of Pharmaceutical Sciences
- Gannan Medical University
- Ganzhou
- P. R. China
| | - Yinlong Lai
- College of Chemistry and Environmental Engineering
- Shaoguan University
- Shaoguan 512005
- China
| | - Jiuzhong Huang
- School of Pharmaceutical Sciences
- Gannan Medical University
- Ganzhou
- P. R. China
| | - Renshi Luo
- School of Pharmaceutical Sciences
- Gannan Medical University
- Ganzhou
- P. R. China
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5
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Kawade RK, Hu C, Dos Santos NR, Watson N, Lin X, Hanson K, Alabugin IV. Phenalenannulations: Three-Point Double Annulation Reactions that Convert Benzenes into Pyrenes. Angew Chem Int Ed Engl 2020; 59:14352-14357. [PMID: 32495480 DOI: 10.1002/anie.202006087] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/27/2020] [Indexed: 12/13/2022]
Abstract
3-Point annulations, or phenalenannulations, transform a benzene ring directly into a substituted pyrene by "wrapping" two new cycles around the perimeter of the central ring at three consecutive carbon atoms. This efficient, modular, and general method for π-extension opens access to non-symmetric pyrenes and their expanded analogues. Potentially, this approach can convert any aromatic ring bearing a -CH2 Br or a -CHO group into a pyrene moiety. Depending upon the workup choices, the process can be directed towards either tin- or iodo-substituted product formation, giving complementary choices for further various cross-coupling reactions. The two-directional bis-double annulation adds two new polyaromatic extensions with a total of six new aromatic rings at a central core.
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Affiliation(s)
- Rahul Kisan Kawade
- Department of Chemistry and Biochemistry, Florida State University, Tallahassee, FL, 32306-4390, USA
| | - Chaowei Hu
- Department of Chemistry and Biochemistry, Florida State University, Tallahassee, FL, 32306-4390, USA
| | - Nikolas R Dos Santos
- Department of Chemistry and Biochemistry, Florida State University, Tallahassee, FL, 32306-4390, USA
| | - Noelle Watson
- Department of Chemistry and Biochemistry, Florida State University, Tallahassee, FL, 32306-4390, USA
| | - Xinsong Lin
- Department of Chemistry and Biochemistry, Florida State University, Tallahassee, FL, 32306-4390, USA
| | - Kenneth Hanson
- Department of Chemistry and Biochemistry, Florida State University, Tallahassee, FL, 32306-4390, USA
| | - Igor V Alabugin
- Department of Chemistry and Biochemistry, Florida State University, Tallahassee, FL, 32306-4390, USA
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6
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Kawade RK, Hu C, Dos Santos NR, Watson N, Lin X, Hanson K, Alabugin IV. Phenalenannulations: Three‐Point Double Annulation Reactions that Convert Benzenes into Pyrenes. Angew Chem Int Ed Engl 2020. [DOI: 10.1002/ange.202006087] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Affiliation(s)
- Rahul Kisan Kawade
- Department of Chemistry and Biochemistry Florida State University Tallahassee FL 32306-4390 USA
| | - Chaowei Hu
- Department of Chemistry and Biochemistry Florida State University Tallahassee FL 32306-4390 USA
| | - Nikolas R. Dos Santos
- Department of Chemistry and Biochemistry Florida State University Tallahassee FL 32306-4390 USA
| | - Noelle Watson
- Department of Chemistry and Biochemistry Florida State University Tallahassee FL 32306-4390 USA
| | - Xinsong Lin
- Department of Chemistry and Biochemistry Florida State University Tallahassee FL 32306-4390 USA
| | - Kenneth Hanson
- Department of Chemistry and Biochemistry Florida State University Tallahassee FL 32306-4390 USA
| | - Igor V. Alabugin
- Department of Chemistry and Biochemistry Florida State University Tallahassee FL 32306-4390 USA
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7
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Magiera KM, Aryal V, Chalifoux WA. Alkyne benzannulations in the preparation of contorted nanographenes. Org Biomol Chem 2020; 18:2372-2386. [PMID: 32196052 DOI: 10.1039/d0ob00182a] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
Abstract
Nanographenes are a popular area of research due to their promising properties for electronics. Over the last twenty years there has been a significant increase in interest in the development of contorted nanographenes. While many top-down techniques are employed in the synthesis of these planar nanographenes, the use of alkynes in bottom-up syntheses allows for easy functionalization and the development of contorted nanographenes. The syntheses of contorted nanographenes with a focus on utilizing alkynes is reviewed here.
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Affiliation(s)
- Kelsie M Magiera
- Department of Chemistry, University of Nevada, Reno, 1664 N. Virginia St., Reno, NV 89557, USA.
| | - Vivek Aryal
- Department of Chemistry, University of Nevada, Reno, 1664 N. Virginia St., Reno, NV 89557, USA.
| | - Wesley A Chalifoux
- Department of Chemistry, University of Nevada, Reno, 1664 N. Virginia St., Reno, NV 89557, USA.
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8
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Cao W, Niu SL, Shuai L, Xiao Q. Copper-catalysed three-component carboiodination of arynes: expeditious synthesis ofo-alkynyl aryl iodides. Chem Commun (Camb) 2020; 56:972-975. [DOI: 10.1039/c9cc09160b] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/10/2023]
Abstract
A copper-catalysed three-component reaction of arynes, terminal alkynes, and NIS provides an expeditious approach too-alkynyl aryl iodides.
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Affiliation(s)
- Wenxuan Cao
- College of Pharmacy
- Third Military Medical University
- Chongqing 400038
- P. R. China
| | - Sheng-Li Niu
- College of Pharmacy
- Third Military Medical University
- Chongqing 400038
- P. R. China
| | - Li Shuai
- College of Pharmacy
- Third Military Medical University
- Chongqing 400038
- P. R. China
| | - Qing Xiao
- College of Pharmacy
- Third Military Medical University
- Chongqing 400038
- P. R. China
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9
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Konishi A. Synthesis of Polycyclic Aromatic Hydrocarbons via Alkyne Benzannulations. J SYN ORG CHEM JPN 2019. [DOI: 10.5059/yukigoseikyokaishi.77.920] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Affiliation(s)
- Akihito Konishi
- Department of Applied Chemistry, Graduate School of Engineering, Osaka University
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10
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Liu J, Mishra S, Pignedoli CA, Passerone D, Urgel JI, Fabrizio A, Lohr TG, Ma J, Komber H, Baumgarten M, Corminboeuf C, Berger R, Ruffieux P, Müllen K, Fasel R, Feng X. Open-Shell Nonbenzenoid Nanographenes Containing Two Pairs of Pentagonal and Heptagonal Rings. J Am Chem Soc 2019; 141:12011-12020. [PMID: 31299150 DOI: 10.1021/jacs.9b04718] [Citation(s) in RCA: 98] [Impact Index Per Article: 16.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
Abstract
Nonbenzenoid carbocyclic rings are postulated to serve as important structural elements toward tuning the chemical and electronic properties of extended polycyclic aromatic hydrocarbons (PAHs, or namely nanographenes), necessitating a rational and atomically precise synthetic approach toward their fabrication. Here, using a combined bottom-up in-solution and on-surface synthetic approach, we report the synthesis of nonbenzenoid open-shell nanographenes containing two pairs of embedded pentagonal and heptagonal rings. Extensive characterization of the resultant nanographene in solution shows a low optical gap, and an open-shell singlet ground state with a low singlet-triplet gap. Employing ultra-high-resolution scanning tunneling microscopy and spectroscopy, we conduct atomic-scale structural and electronic studies on a cyclopenta-fused derivative on a Au(111) surface. The resultant five to seven rings embedded nanographene displays an extremely narrow energy gap of 0.27 eV and exhibits a pronounced open-shell biradical character close to 1 (y0 = 0.92). Our experimental results are supported by mean-field and multiconfigurational quantum chemical calculations. Access to large nanographenes with a combination of nonbenzenoid topologies and open-shell character should have wide implications in harnessing new functionalities toward the realization of future organic electronic and spintronic devices.
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Affiliation(s)
- Junzhi Liu
- Center for Advancing Electronics Dresden (cfaed) & Department of Chemistry and Food Chemistry , Technische Universität Dresden , 01062 Dresden , Germany
| | - Shantanu Mishra
- Empa, Swiss Federal Laboratories for Materials Science and Technology , Überlandstrasse 129 , 8600 Dübendorf , Switzerland
| | - Carlo A Pignedoli
- Empa, Swiss Federal Laboratories for Materials Science and Technology , Überlandstrasse 129 , 8600 Dübendorf , Switzerland.,National Centre for Computational Design and Discovery of Novel Materials (MARVEL) , 1015 Lausanne , Switzerland
| | - Daniele Passerone
- Empa, Swiss Federal Laboratories for Materials Science and Technology , Überlandstrasse 129 , 8600 Dübendorf , Switzerland.,National Centre for Computational Design and Discovery of Novel Materials (MARVEL) , 1015 Lausanne , Switzerland
| | - José I Urgel
- Empa, Swiss Federal Laboratories for Materials Science and Technology , Überlandstrasse 129 , 8600 Dübendorf , Switzerland
| | - Alberto Fabrizio
- National Centre for Computational Design and Discovery of Novel Materials (MARVEL) , 1015 Lausanne , Switzerland.,Laboratory for Computational Molecular Design , École Polytechnique Fédérale de Lausanne , Avenue F.-A. Forel 2 , 1015 Lausanne , Switzerland
| | - Thorsten G Lohr
- Center for Advancing Electronics Dresden (cfaed) & Department of Chemistry and Food Chemistry , Technische Universität Dresden , 01062 Dresden , Germany
| | - Ji Ma
- Center for Advancing Electronics Dresden (cfaed) & Department of Chemistry and Food Chemistry , Technische Universität Dresden , 01062 Dresden , Germany
| | - Hartmut Komber
- Leibniz-Institut für Polymerforschung Dresden e.V. , Hohestraße 6 , 01069 Dresden , Germany
| | | | - Clémence Corminboeuf
- National Centre for Computational Design and Discovery of Novel Materials (MARVEL) , 1015 Lausanne , Switzerland.,Laboratory for Computational Molecular Design , École Polytechnique Fédérale de Lausanne , Avenue F.-A. Forel 2 , 1015 Lausanne , Switzerland
| | - Reinhard Berger
- Center for Advancing Electronics Dresden (cfaed) & Department of Chemistry and Food Chemistry , Technische Universität Dresden , 01062 Dresden , Germany
| | - Pascal Ruffieux
- Empa, Swiss Federal Laboratories for Materials Science and Technology , Überlandstrasse 129 , 8600 Dübendorf , Switzerland
| | - Klaus Müllen
- Max-Planck Institut für Polymerforschung , 55128 Mainz , Germany
| | - Roman Fasel
- Empa, Swiss Federal Laboratories for Materials Science and Technology , Überlandstrasse 129 , 8600 Dübendorf , Switzerland.,Department of Chemistry and Biochemistry , University of Bern , Freiestrasse 3 , 3012 Bern , Switzerland
| | - Xinliang Feng
- Center for Advancing Electronics Dresden (cfaed) & Department of Chemistry and Food Chemistry , Technische Universität Dresden , 01062 Dresden , Germany
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11
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Xie Q, Zhao Y, Chen D, Zhu J. Probing Reaction Mechanism of [1,5]‐Migration in Pyrrolium and Pyrrole Derivatives: Activation of a Stronger Bond in Electropositive Groups Becomes Easier. Chem Asian J 2019; 14:2604-2610. [DOI: 10.1002/asia.201900440] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/31/2019] [Revised: 05/12/2019] [Indexed: 12/25/2022]
Affiliation(s)
- Qiong Xie
- State Key Laboratory of Physical Chemistry of Solid Surfaces and Collaborative Innovation Center of Chemistry for Energy, Materials (iChEM)Fujian Provincial Key Laboratory of, Theoretical and Computational Chemistry and Department of, ChemistryCollege of Chemistry and Chemical EngineeringXiamen University Xiamen 361005 P.R. China
| | - Yu Zhao
- State Key Laboratory of Physical Chemistry of Solid Surfaces and Collaborative Innovation Center of Chemistry for Energy, Materials (iChEM)Fujian Provincial Key Laboratory of, Theoretical and Computational Chemistry and Department of, ChemistryCollege of Chemistry and Chemical EngineeringXiamen University Xiamen 361005 P.R. China
| | - Dandan Chen
- State Key Laboratory of Physical Chemistry of Solid Surfaces and Collaborative Innovation Center of Chemistry for Energy, Materials (iChEM)Fujian Provincial Key Laboratory of, Theoretical and Computational Chemistry and Department of, ChemistryCollege of Chemistry and Chemical EngineeringXiamen University Xiamen 361005 P.R. China
| | - Jun Zhu
- State Key Laboratory of Physical Chemistry of Solid Surfaces and Collaborative Innovation Center of Chemistry for Energy, Materials (iChEM)Fujian Provincial Key Laboratory of, Theoretical and Computational Chemistry and Department of, ChemistryCollege of Chemistry and Chemical EngineeringXiamen University Xiamen 361005 P.R. China
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12
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Chaudhuri S, Mohanan M, Willems AV, Bertke JA, Gavvalapalli N. β-Strand inspired bifacial π-conjugated polymers. Chem Sci 2019; 10:5976-5982. [PMID: 31360404 PMCID: PMC6566302 DOI: 10.1039/c9sc01724k] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/08/2019] [Accepted: 05/09/2019] [Indexed: 11/21/2022] Open
Abstract
Access to diverse, relatively high molecular weight soluble linear polymers without pendant solubilizing chains is the key to solution state synthesis of structurally diverse nanoribbons of conjugated materials. However, realizing soluble 1D-π-conjugated polymers without pendant solubilizing chains is a daunting task. Herein, inspired from the polypeptide β-strand architecture, we have designed and developed novel bifacial π-conjugated polymers (M n: ca. 24 kDa) that are soluble (ca. 70 to >250 mM) despite the absence of pendant solubilizing chains. The impact of varying the bifacial monomer height on polymer solubility, optical properties, and interactions with small molecules is reported.
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Affiliation(s)
- Saikat Chaudhuri
- Department of Chemistry , Institute for Soft Matter Synthesis and Metrology , Georgetown University , 3700 O st NW , Washington , D.C. 20057 , USA .
| | - Manikandan Mohanan
- Department of Chemistry , Institute for Soft Matter Synthesis and Metrology , Georgetown University , 3700 O st NW , Washington , D.C. 20057 , USA .
| | - Andreas V Willems
- Department of Chemistry , Institute for Soft Matter Synthesis and Metrology , Georgetown University , 3700 O st NW , Washington , D.C. 20057 , USA .
| | - Jeffery A Bertke
- Department of Chemistry , Institute for Soft Matter Synthesis and Metrology , Georgetown University , 3700 O st NW , Washington , D.C. 20057 , USA .
| | - Nagarjuna Gavvalapalli
- Department of Chemistry , Institute for Soft Matter Synthesis and Metrology , Georgetown University , 3700 O st NW , Washington , D.C. 20057 , USA .
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13
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Hughes AM, dos Passos Gomes G, Alabugin IV. Stereoelectronic Influence of a “Spectator” Propargylic Substituent Can Override Aromaticity Effects in Radical Peri-Cyclizations en Route to Expanded Polyaromatics. J Org Chem 2019; 84:1853-1862. [DOI: 10.1021/acs.joc.8b02779] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Audrey M. Hughes
- Department of Chemistry and Biochemistry, Florida State University, Tallahassee, Florida 32306, United States
| | - Gabriel dos Passos Gomes
- Department of Chemistry and Biochemistry, Florida State University, Tallahassee, Florida 32306, United States
| | - Igor V. Alabugin
- Department of Chemistry and Biochemistry, Florida State University, Tallahassee, Florida 32306, United States
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14
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Senese AD, Chalifoux WA. Nanographene and Graphene Nanoribbon Synthesis via Alkyne Benzannulations. Molecules 2018; 24:molecules24010118. [PMID: 30598009 PMCID: PMC6337508 DOI: 10.3390/molecules24010118] [Citation(s) in RCA: 47] [Impact Index Per Article: 6.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/08/2018] [Revised: 12/24/2018] [Accepted: 12/25/2018] [Indexed: 11/16/2022] Open
Abstract
The extension of π-conjugation of polycyclic aromatic hydrocarbons (PAHs) via alkyne benzannulation reactions has become an increasingly utilized tool over the past few years. This short review will highlight recent work of alkyne benzannulations in the context of large nanographene as well as graphene nanoribbon synthesis along with a brief discussion of the interesting physical properties these molecules display.
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Affiliation(s)
- Amber D Senese
- Department of Chemistry, University of Nevada, Reno, 1664 N. Virginia St., Reno, NV 89557, USA.
| | - Wesley A Chalifoux
- Department of Chemistry, University of Nevada, Reno, 1664 N. Virginia St., Reno, NV 89557, USA.
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15
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Voronin VV, Ledovskaya MS, Bogachenkov AS, Rodygin KS, Ananikov VP. Acetylene in Organic Synthesis: Recent Progress and New Uses. Molecules 2018; 23:E2442. [PMID: 30250005 PMCID: PMC6222752 DOI: 10.3390/molecules23102442] [Citation(s) in RCA: 72] [Impact Index Per Article: 10.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/16/2018] [Revised: 09/14/2018] [Accepted: 09/17/2018] [Indexed: 11/16/2022] Open
Abstract
Recent progress in the leading synthetic applications of acetylene is discussed from the prospect of rapid development and novel opportunities. A diversity of reactions involving the acetylene molecule to carry out vinylation processes, cross-coupling reactions, synthesis of substituted alkynes, preparation of heterocycles and the construction of a number of functionalized molecules with different levels of molecular complexity were recently studied. Of particular importance is the utilization of acetylene in the synthesis of pharmaceutical substances and drugs. The increasing interest in acetylene and its involvement in organic transformations highlights a fascinating renaissance of this simplest alkyne molecule.
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Affiliation(s)
- Vladimir V Voronin
- Institute of Chemistry, Saint Petersburg State University, Universitetsky prospect 26, Peterhof 198504, Russia.
| | - Maria S Ledovskaya
- Institute of Chemistry, Saint Petersburg State University, Universitetsky prospect 26, Peterhof 198504, Russia.
| | - Alexander S Bogachenkov
- Institute of Chemistry, Saint Petersburg State University, Universitetsky prospect 26, Peterhof 198504, Russia.
| | - Konstantin S Rodygin
- Institute of Chemistry, Saint Petersburg State University, Universitetsky prospect 26, Peterhof 198504, Russia.
| | - Valentine P Ananikov
- Institute of Chemistry, Saint Petersburg State University, Universitetsky prospect 26, Peterhof 198504, Russia.
- N. D. Zelinsky Institute of Organic Chemistry Russian Academy of Sciences, Leninsky prospect 47, Moscow 119991, Russia.
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16
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Jadhav AS, Pankhade YA, Hazra R, Anand RV. 1,6-Hydroolefination and Cascade Cyclization of p-Quinone Methides with Styrenes: Total Synthesis of (±)-Isopaucifloral F. J Org Chem 2018; 83:10107-10119. [DOI: 10.1021/acs.joc.8b01401] [Citation(s) in RCA: 25] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/04/2023]
Affiliation(s)
- Abhijeet S. Jadhav
- Department of Chemical Sciences, Indian Institute of Science Education and Research (IISER) Mohali, Sector 81, Knowledge City, S. A. S. Nagar, Manauli (PO), Punjab − 140306, India
| | - Yogesh A. Pankhade
- Department of Chemical Sciences, Indian Institute of Science Education and Research (IISER) Mohali, Sector 81, Knowledge City, S. A. S. Nagar, Manauli (PO), Punjab − 140306, India
| | - Raju Hazra
- Department of Chemical Sciences, Indian Institute of Science Education and Research (IISER) Mohali, Sector 81, Knowledge City, S. A. S. Nagar, Manauli (PO), Punjab − 140306, India
| | - Ramasamy Vijaya Anand
- Department of Chemical Sciences, Indian Institute of Science Education and Research (IISER) Mohali, Sector 81, Knowledge City, S. A. S. Nagar, Manauli (PO), Punjab − 140306, India
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17
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Alabugin IV, Gonzalez-Rodriguez E. Alkyne Origami: Folding Oligoalkynes into Polyaromatics. Acc Chem Res 2018; 51:1206-1219. [PMID: 29676896 DOI: 10.1021/acs.accounts.8b00026] [Citation(s) in RCA: 68] [Impact Index Per Article: 9.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Abstract
Do not bend the triple bonds! This familiar undergraduate mantra must be disobeyed if the alkyne group is used as a building block in molecular construction. This Account will describe our exploits in "alkyne origami", that is, folding oligoalkynes into new shapes via cyclization cascades. This research stems from a set of guidelines for the cyclizations of alkynes that we suggested in 2011 ( Gilmore Chem. Rev. 2011 , 111 , 6513 ; Alabugin J. Am. Chem. Soc. 2011 , 133 , 12608 ). The guidelines blended critical analysis of ∼40 years of experimental research with computations into the comprehensive predictions of the relative favorability of dig-cyclizations of anions and radicals. In this Account, we will show how this new understanding has been instrumental in building polyaromatics. In particular, we illustrate the utility of these stereoelectronic models by developing a toolbox of practical, selective, and efficient synthetic transformations. The high energy and high carbon content render alkynes the perfect precursors for the preparation of polyaromatic ribbons and other carbon-rich materials with precisely controlled structure and reactivity. Still, the paradox of alkyne reactivity (alkynes store a lot of energy but are protected kinetically by their relatively strong π-bonds) requires precise use of stereoelectronic factors for lowering the activation barriers for alkyne cyclizations. These factors are drastically different in the "all-exo" and the "all-endo" cyclization cascades of oligoynes. This Account will highlight the interplay between the stereoelectronics of bond formation and topology of acyclic precursor "folding" into a polycyclic ribbon. The topology of folding is simpler for the endo cascades, which are compatible with initiation either at the edge or at the center. In contrast, the exo cascades require precise folding of an oligoalkyne ribbon by starting the cascade exactly at the center of the chain. These differences define the key challenges in the design of these two types of alkyne cyclization cascades. For the endo processes, the folding is simple, but these processes require a strategy ("LUMO Umpolung") for inverting the usual stereoelectronic requirements of alkyne cyclizations. We also show how alkenes can be used as alkyne equivalents in cyclizations coupled with fragmentations and how one can make endo cyclization products without ever going through an endo cyclization. In contrast, each elementary step of the exo cascades benefits from the inherent exo preference for the radical attack, but these cascades require precise initiation by starting exactly at the central alkyne unit of the oligoyne. This strict selectivity requirement led to the development of traceless directing groups capable of supramolecular assistance to the initiation step and self-terminating departure at the end of the cascade. With attention to electronic effects that can stop radical cascades, oligoalkynes can be selectively converted into precisely shaped and functionalized polyaromatic products. The generality of these concepts is further illustrated by the development of radical "peri annulations" at the zigzag edge of acenes.
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Affiliation(s)
- Igor V. Alabugin
- Department of Chemistry and Biochemistry, Florida State University, Tallahassee, Florida 32306, United States
| | - Edgar Gonzalez-Rodriguez
- Department of Chemistry and Biochemistry, Florida State University, Tallahassee, Florida 32306, United States
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18
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Tsvetkov NP, Gonzalez‐Rodriguez E, Hughes A, dos Passos Gomes G, White FD, Kuriakose F, Alabugin IV. Radical Alkyne
peri
‐Annulation Reactions for the Synthesis of Functionalized Phenalenes, Benzanthrenes, and Olympicene. Angew Chem Int Ed Engl 2018; 57:3651-3655. [DOI: 10.1002/anie.201712783] [Citation(s) in RCA: 26] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/12/2017] [Indexed: 11/12/2022]
Affiliation(s)
- Nikolay P. Tsvetkov
- Department of Chemistry and Biochemistry Florida State University Tallahassee FL 32306-4390 USA
| | | | - Audrey Hughes
- Department of Chemistry and Biochemistry Florida State University Tallahassee FL 32306-4390 USA
| | | | - Frankie D. White
- Department of Chemistry and Biochemistry Florida State University Tallahassee FL 32306-4390 USA
| | - Febin Kuriakose
- Department of Chemistry and Biochemistry Florida State University Tallahassee FL 32306-4390 USA
| | - Igor V. Alabugin
- Department of Chemistry and Biochemistry Florida State University Tallahassee FL 32306-4390 USA
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19
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Tsvetkov NP, Gonzalez‐Rodriguez E, Hughes A, dos Passos Gomes G, White FD, Kuriakose F, Alabugin IV. Radical Alkyne
peri
‐Annulation Reactions for the Synthesis of Functionalized Phenalenes, Benzanthrenes, and Olympicene. Angew Chem Int Ed Engl 2018. [DOI: 10.1002/ange.201712783] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Affiliation(s)
- Nikolay P. Tsvetkov
- Department of Chemistry and Biochemistry Florida State University Tallahassee FL 32306-4390 USA
| | | | - Audrey Hughes
- Department of Chemistry and Biochemistry Florida State University Tallahassee FL 32306-4390 USA
| | | | - Frankie D. White
- Department of Chemistry and Biochemistry Florida State University Tallahassee FL 32306-4390 USA
| | - Febin Kuriakose
- Department of Chemistry and Biochemistry Florida State University Tallahassee FL 32306-4390 USA
| | - Igor V. Alabugin
- Department of Chemistry and Biochemistry Florida State University Tallahassee FL 32306-4390 USA
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20
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Mandal M, Balamurugan R. Triflic acid-Mediated Expedient Synthesis of Benzo[a
]fluorenes and Fluorescent Benzo[a
]fluorenones. Adv Synth Catal 2018. [DOI: 10.1002/adsc.201701516] [Citation(s) in RCA: 22] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Affiliation(s)
- Mou Mandal
- School of Chemistry; University of Hyderabad; Gachibowli Hyderabad- 500046 India
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21
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Lyapunova AG, Danilkina NA, Rumyantsev AM, Khlebnikov AF, Chislov MV, Starova GL, Sambuk EV, Govdi AI, Bräse S, Balova IA. Relative Reactivity of Benzothiophene-Fused Enediynes in the Bergman Cyclization. J Org Chem 2018; 83:2788-2801. [DOI: 10.1021/acs.joc.7b03258] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/15/2023]
Affiliation(s)
- Anna G. Lyapunova
- Institute
of Chemistry, Saint Petersburg State University (SPbSU), Universitetskaya
nab. 7/9, 199034 Saint Petersburg, Russia
| | - Natalia A. Danilkina
- Institute
of Chemistry, Saint Petersburg State University (SPbSU), Universitetskaya
nab. 7/9, 199034 Saint Petersburg, Russia
| | - Andrey M. Rumyantsev
- Department
of Genetics and Biotechnology, Saint Petersburg State University (SPbSU), Universitetskaya nab. 7/9, 199034 Saint Petersburg, Russia
| | - A. F. Khlebnikov
- Institute
of Chemistry, Saint Petersburg State University (SPbSU), Universitetskaya
nab. 7/9, 199034 Saint Petersburg, Russia
| | - Mikhail V. Chislov
- Research
Centre for Thermogravimetric and Calorimetric Research, St. Petersburg State University, Universitetskaya nab. 7/9, 199034 Saint Petersburg, Russia
| | - Galina L. Starova
- Institute
of Chemistry, Saint Petersburg State University (SPbSU), Universitetskaya
nab. 7/9, 199034 Saint Petersburg, Russia
| | - Elena V. Sambuk
- Department
of Genetics and Biotechnology, Saint Petersburg State University (SPbSU), Universitetskaya nab. 7/9, 199034 Saint Petersburg, Russia
| | - Anastasia I. Govdi
- Institute
of Chemistry, Saint Petersburg State University (SPbSU), Universitetskaya
nab. 7/9, 199034 Saint Petersburg, Russia
| | - Stefan Bräse
- Institute
of Organic Chemistry (IOC), Karlsruhe Institute of Technology (KIT), Fritz-Haber-Weg 6, 76131 Karlsruhe, Germany
- Institute
of Toxicology and Genetics (ITG), Karlsruhe Institute of Technology (KIT), Hermann-von-Helmholtz-Platz 1, D-76344 Eggenstein-Leopoldshafen, Germany
| | - Irina A. Balova
- Institute
of Chemistry, Saint Petersburg State University (SPbSU), Universitetskaya
nab. 7/9, 199034 Saint Petersburg, Russia
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22
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Hou ZW, Mao ZY, Song J, Xu HC. Electrochemical Synthesis of Polycyclic N-Heteroaromatics through Cascade Radical Cyclization of Diynes. ACS Catal 2017. [DOI: 10.1021/acscatal.7b02105] [Citation(s) in RCA: 99] [Impact Index Per Article: 12.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/26/2023]
Affiliation(s)
- Zhong-Wei Hou
- iChEM,
State Key Laboratory of Physical Chemistry of Solid Surfaces, and
College of Chemistry and Chemical Engineering, Xiamen University, Xiamen 361005, P.R. China
| | - Zhong-Yi Mao
- iChEM,
State Key Laboratory of Physical Chemistry of Solid Surfaces, and
College of Chemistry and Chemical Engineering, Xiamen University, Xiamen 361005, P.R. China
| | - Jinshuai Song
- Fujian
Institute of Research on Structure of Matter, Chinese Academy of Sciences, Fuzhou 350002, P.R. China
| | - Hai-Chao Xu
- iChEM,
State Key Laboratory of Physical Chemistry of Solid Surfaces, and
College of Chemistry and Chemical Engineering, Xiamen University, Xiamen 361005, P.R. China
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23
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Mohan Saini K, Kumar S, Patel M, Saunthwal RK, Verma AK. Trifluoroacetic Acid Mediated One-Pot Synthesis of Furo-Fused Quinoxalines/Pyrazines. European J Org Chem 2017. [DOI: 10.1002/ejoc.201700541] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Affiliation(s)
| | - Sonu Kumar
- Department of Chemistry; University of Delhi; 110007 Delhi India
| | - Monika Patel
- Department of Chemistry; University of Delhi; 110007 Delhi India
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24
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Shekhirev M, Sinitskii A. Solution Synthesis of Atomically Precise Graphene Nanoribbons. PHYSICAL SCIENCES REVIEWS 2017. [DOI: 10.1515/psr-2016-0108] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
Abstract
AbstractBottom-up fabrication of narrow strips of graphene, also known as graphene nanoribbons or GNRs, is an attractive way to open a bandgap in semimetallic graphene. In this chapter, we review recent progress in solution-based synthesis of GNRs with atomically precise structures. We discuss a variety of atomically precise GNRs and highlight theoretical and practical aspects of their structural design and solution synthesis. These GNRs are typically synthesized through a polymerization of rationally designed molecular precursors followed by a planarization through a cyclodehydrogenation reaction. We discuss various synthetic techniques for polymerization and planarization steps, possible approaches for chemical modification of GNRs, and compare the properties of GNRs that could be achieved by different synthetic methods. We also discuss the importance of the rational design of molecular precursors to avoid isomerization during the synthesis and achieve GNRs that have only one possible structure. Significant attention in this chapter is paid to the methods of material characterization of solution-synthesized GNRs. The chapter is concluded with the discussion of the most significant challenges in the field and the future outlook.
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25
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Bheemireddy SR, Hautzinger MP, Li T, Lee B, Plunkett KN. Conjugated Ladder Polymers by a Cyclopentannulation Polymerization. J Am Chem Soc 2017; 139:5801-5807. [DOI: 10.1021/jacs.6b12916] [Citation(s) in RCA: 68] [Impact Index Per Article: 8.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Sambasiva R. Bheemireddy
- Department
of Chemistry and Biochemistry and the Materials Technology Center, Southern Illinois University, Carbondale, Illinois 62901, United States
| | - Matthew P. Hautzinger
- Department
of Chemistry and Biochemistry and the Materials Technology Center, Southern Illinois University, Carbondale, Illinois 62901, United States
| | - Tao Li
- X-ray
Science Division, Argonne National Laboratory, 9700 South Cass Ave., Argonne, Illinois 60439, United States
| | - Byeongdu Lee
- X-ray
Science Division, Argonne National Laboratory, 9700 South Cass Ave., Argonne, Illinois 60439, United States
| | - Kyle N. Plunkett
- Department
of Chemistry and Biochemistry and the Materials Technology Center, Southern Illinois University, Carbondale, Illinois 62901, United States
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26
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Chen S, Li Q, Sun S, Ding Y, Hu A. A Novel Approach toward Polyfulvene: Cationic Polymerization of Enediynes. Macromolecules 2017. [DOI: 10.1021/acs.macromol.6b02321] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/11/2023]
Affiliation(s)
- Shudan Chen
- Shanghai Key Laboratory of
Advanced Polymeric Materials, School of Materials Science and Engineering, East China University of Science and Technology, Shanghai 200237, China
| | - Qiaoping Li
- Shanghai Key Laboratory of
Advanced Polymeric Materials, School of Materials Science and Engineering, East China University of Science and Technology, Shanghai 200237, China
| | - Shiyuan Sun
- Shanghai Key Laboratory of
Advanced Polymeric Materials, School of Materials Science and Engineering, East China University of Science and Technology, Shanghai 200237, China
| | - Yun Ding
- Shanghai Key Laboratory of
Advanced Polymeric Materials, School of Materials Science and Engineering, East China University of Science and Technology, Shanghai 200237, China
| | - Aiguo Hu
- Shanghai Key Laboratory of
Advanced Polymeric Materials, School of Materials Science and Engineering, East China University of Science and Technology, Shanghai 200237, China
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27
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Li BJ, Zhong H, Yu HT. Theoretical Investigation of Regioselectivity and Stereoselectivity in AIBN/HSnBu3-Mediated Radical Cyclization of N-(2-Iodo-4,6-dimethylphenyl)-N,2-dimethyl-(2E)-butenamide. J Phys Chem B 2016; 120:12950-12958. [DOI: 10.1021/acs.jpcb.6b10344] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Bai-jian Li
- Key Laboratory of Functional Inorganic
Material Chemistry (Ministry of Education of China) and School of
Chemistry and Materials Science, Heilongjiang University, Harbin 150080, P. R. China
| | - Hua Zhong
- Key Laboratory of Functional Inorganic
Material Chemistry (Ministry of Education of China) and School of
Chemistry and Materials Science, Heilongjiang University, Harbin 150080, P. R. China
| | - Hai-tao Yu
- Key Laboratory of Functional Inorganic
Material Chemistry (Ministry of Education of China) and School of
Chemistry and Materials Science, Heilongjiang University, Harbin 150080, P. R. China
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28
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Yan M, Lo JC, Edwards JT, Baran PS. Radicals: Reactive Intermediates with Translational Potential. J Am Chem Soc 2016; 138:12692-12714. [PMID: 27631602 PMCID: PMC5054485 DOI: 10.1021/jacs.6b08856] [Citation(s) in RCA: 720] [Impact Index Per Article: 80.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/23/2016] [Indexed: 02/08/2023]
Abstract
This Perspective illustrates the defining characteristics of free radical chemistry, beginning with its rich and storied history. Studies from our laboratory are discussed along with recent developments emanating from others in this burgeoning area. The practicality and chemoselectivity of radical reactions enable rapid access to molecules of relevance to drug discovery, agrochemistry, material science, and other disciplines. Thus, these reactive intermediates possess inherent translational potential, as they can be widely used to expedite scientific endeavors for the betterment of humankind.
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Affiliation(s)
- Ming Yan
- Department
of Chemistry, The Scripps Research Institute, 10550 North Torrey Pines Road, La Jolla, California 92037, United States
| | - Julian C. Lo
- Department
of Chemistry, The Scripps Research Institute, 10550 North Torrey Pines Road, La Jolla, California 92037, United States
| | - Jacob T. Edwards
- Department
of Chemistry, The Scripps Research Institute, 10550 North Torrey Pines Road, La Jolla, California 92037, United States
| | - Phil S. Baran
- Department
of Chemistry, The Scripps Research Institute, 10550 North Torrey Pines Road, La Jolla, California 92037, United States
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29
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Pati K, dos Passos Gomes G, Alabugin IV. Combining Traceless Directing Groups with Hybridization Control of Radical Reactivity: From Skipped Enynes to Defect‐Free Hexagonal Frameworks. Angew Chem Int Ed Engl 2016. [DOI: 10.1002/ange.201605799] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
Affiliation(s)
| | | | - Igor V. Alabugin
- Department of Chemistry Florida State University Tallahassee FL USA
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30
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de Oteyza DG, Pérez Paz A, Chen YC, Pedramrazi Z, Riss A, Wickenburg S, Tsai HZ, Fischer FR, Crommie MF, Rubio A. Noncovalent Dimerization after Enediyne Cyclization on Au(111). J Am Chem Soc 2016; 138:10963-7. [PMID: 27490459 DOI: 10.1021/jacs.6b05203] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/30/2023]
Abstract
We investigate the thermally induced cyclization of 1,2-bis(2-phenylethynyl)benzene on Au(111) using scanning tunneling microscopy and computer simulations. Cyclization of sterically hindered enediynes is known to proceed via two competing mechanisms in solution: a classic C(1)-C(6) (Bergman) or a C(1)-C(5) cyclization pathway. On Au(111), we find that the C(1)-C(5) cyclization is suppressed and that the C(1)-C(6) cyclization yields a highly strained bicyclic olefin whose surface chemistry was hitherto unknown. The C(1)-C(6) product self-assembles into discrete noncovalently bound dimers on the surface. The reaction mechanism and driving forces behind noncovalent association are discussed in light of density functional theory calculations.
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Affiliation(s)
- Dimas G de Oteyza
- Donostia International Physics Center , E-20018 San Sebastián, Spain.,Ikerbasque, Basque Foundation for Science , E-48011 Bilbao, Spain
| | - Alejandro Pérez Paz
- Nano-Bio Spectroscopy Group and ETSF, Universidad del País Vasco, CFM CSIC-UPV/EHU-MPC , 20018 San Sebastián, Spain
| | - Yen-Chia Chen
- Department of Physics, University of California , Berkeley, California 94720, United States
| | - Zahra Pedramrazi
- Department of Physics, University of California , Berkeley, California 94720, United States
| | - Alexander Riss
- Department of Physics, University of California , Berkeley, California 94720, United States
| | - Sebastian Wickenburg
- Department of Physics, University of California , Berkeley, California 94720, United States
| | - Hsin-Zon Tsai
- Department of Physics, University of California , Berkeley, California 94720, United States
| | - Felix R Fischer
- Department of Chemistry, University of California , Berkeley, California 94720, United States.,Materials Sciences Division, Lawrence Berkeley National Laboratory , Berkeley, California 94720, United States.,Kavli Energy NanoSciences Institute at the University of California Berkeley and the Lawrence Berkeley National Laboratory , Berkeley, California 94720, United States
| | - Michael F Crommie
- Department of Physics, University of California , Berkeley, California 94720, United States.,Materials Sciences Division, Lawrence Berkeley National Laboratory , Berkeley, California 94720, United States.,Kavli Energy NanoSciences Institute at the University of California Berkeley and the Lawrence Berkeley National Laboratory , Berkeley, California 94720, United States
| | - Angel Rubio
- Nano-Bio Spectroscopy Group and ETSF, Universidad del País Vasco, CFM CSIC-UPV/EHU-MPC , 20018 San Sebastián, Spain.,Max Planck Institute for the Structure and Dynamics of Matter , Luruper Chaussee 149, 22761 Hamburg, Germany.,Center for Free-electron Laser Science (CFEL) , Luruper Chaussee 149, 22761 Hamburg, Germany
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31
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Pati K, dos Passos Gomes G, Alabugin IV. Combining Traceless Directing Groups with Hybridization Control of Radical Reactivity: From Skipped Enynes to Defect‐Free Hexagonal Frameworks. Angew Chem Int Ed Engl 2016; 55:11633-7. [DOI: 10.1002/anie.201605799] [Citation(s) in RCA: 29] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/15/2016] [Indexed: 01/08/2023]
Affiliation(s)
| | | | - Igor V. Alabugin
- Department of Chemistry Florida State University Tallahassee FL USA
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32
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Hibi D, Kitabayashi K, Fujita K, Takeda T, Tobe Y. Diindenopyrenes: Extended 1,6- and 1,8-Pyrenoquinodimethanes with Singlet Diradical Characters. J Org Chem 2016; 81:3735-43. [PMID: 27030887 DOI: 10.1021/acs.joc.6b00389] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Diindenopyrene 4b and its diastereomer, which are extended homologues of 1,6- and 1,8-pyrenoquinodimethanes fused by indene units, respectively, were synthesized by reaction of 1,4,5,8-tetrakis(mesitylethynyl)naphthalene (7) with bis(2,4,6-trimethylpyridine)iodine(I) hexafluorophosphate via cationic cyclization mechanisms at both centers of reaction. Unexpectedly, reaction of 7 with iodine, a reagent that typically gives products of cationic cyclization, gave cycloheptapentalenoindenophenalene derivative 9b and its diastereomer incorporating an azulene unit at one end of the π framework, via two different modes (radical and cationic) of cyclization at each reaction site. The physical properties of the products are presented, and the dual modes of cyclization of 7 and its model compound with only one reaction center are discussed.
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Affiliation(s)
- Daijiro Hibi
- Division of Frontier Materials Science, Graduate School of Engineering Science, Osaka University , 1-3 Machikaneyama, Toyonaka 560-8531, Japan
| | - Kenichi Kitabayashi
- Division of Frontier Materials Science, Graduate School of Engineering Science, Osaka University , 1-3 Machikaneyama, Toyonaka 560-8531, Japan
| | - Kazuya Fujita
- Division of Frontier Materials Science, Graduate School of Engineering Science, Osaka University , 1-3 Machikaneyama, Toyonaka 560-8531, Japan
| | - Takashi Takeda
- Division of Frontier Materials Science, Graduate School of Engineering Science, Osaka University , 1-3 Machikaneyama, Toyonaka 560-8531, Japan
| | - Yoshito Tobe
- Division of Frontier Materials Science, Graduate School of Engineering Science, Osaka University , 1-3 Machikaneyama, Toyonaka 560-8531, Japan
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33
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Ling F, Wan Y, Wang D, Ma C. Coupling and Decoupling Approach Enables Palladium-Catalyzed Aerobic Bimolecular Carbocyclizations of Enediynes to 2,6-Diacylnaphthalenes. J Org Chem 2016; 81:2770-81. [DOI: 10.1021/acs.joc.5b02870] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/12/2023]
Affiliation(s)
- Fei Ling
- Department of Chemistry, Zhejiang University, 20 Yugu Road, Hangzhou 310027, China
| | - Yanjun Wan
- Department of Chemistry, Zhejiang University, 20 Yugu Road, Hangzhou 310027, China
| | - Dongxu Wang
- Department of Chemistry, Zhejiang University, 20 Yugu Road, Hangzhou 310027, China
| | - Cheng Ma
- Department of Chemistry, Zhejiang University, 20 Yugu Road, Hangzhou 310027, China
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34
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Raviola C, Protti S, Ravelli D, Fagnoni M. (Hetero)aromatics from dienynes, enediynes and enyne–allenes. Chem Soc Rev 2016; 45:4364-90. [DOI: 10.1039/c6cs00128a] [Citation(s) in RCA: 64] [Impact Index Per Article: 7.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/21/2023]
Abstract
Recent advances in the synthesis of (hetero)aromatics starting from polyenes, such as dienynes, enediynes and enyne–allenes, are discussed.
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35
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Pati K, Michas C, Allenger D, Piskun I, Coutros PS, Gomes GDP, Alabugin IV. Synthesis of Functionalized Phenanthrenes via Regioselective Oxidative Radical Cyclization. J Org Chem 2015; 80:11706-17. [DOI: 10.1021/acs.joc.5b01014] [Citation(s) in RCA: 51] [Impact Index Per Article: 5.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Kamalkishore Pati
- Department of Chemistry and
Biochemistry, Florida State University, Tallahassee, Florida 32306, United States
| | - Christopher Michas
- Department of Chemistry and
Biochemistry, Florida State University, Tallahassee, Florida 32306, United States
| | - David Allenger
- Department of Chemistry and
Biochemistry, Florida State University, Tallahassee, Florida 32306, United States
| | - Ilya Piskun
- Department of Chemistry and
Biochemistry, Florida State University, Tallahassee, Florida 32306, United States
| | - Peter S. Coutros
- Department of Chemistry and
Biochemistry, Florida State University, Tallahassee, Florida 32306, United States
| | - Gabriel dos Passos Gomes
- Department of Chemistry and
Biochemistry, Florida State University, Tallahassee, Florida 32306, United States
| | - Igor V. Alabugin
- Department of Chemistry and
Biochemistry, Florida State University, Tallahassee, Florida 32306, United States
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36
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Mohamed RK, Mondal S, Gold B, Evoniuk CJ, Banerjee T, Hanson K, Alabugin IV. Alkenes as Alkyne Equivalents in Radical Cascades Terminated by Fragmentations: Overcoming Stereoelectronic Restrictions on Ring Expansions for the Preparation of Expanded Polyaromatics. J Am Chem Soc 2015; 137:6335-49. [DOI: 10.1021/jacs.5b02373] [Citation(s) in RCA: 80] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Affiliation(s)
- Rana K. Mohamed
- Florida State University, Tallahassee, Florida 32306, United States
| | - Sayantan Mondal
- Florida State University, Tallahassee, Florida 32306, United States
| | - Brian Gold
- Florida State University, Tallahassee, Florida 32306, United States
| | | | - Tanmay Banerjee
- Florida State University, Tallahassee, Florida 32306, United States
| | - Kenneth Hanson
- Florida State University, Tallahassee, Florida 32306, United States
| | - Igor V. Alabugin
- Florida State University, Tallahassee, Florida 32306, United States
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37
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Vasilevsky SF, Baranov DS, Mamatyuk VI, Fadeev DS, Gatilov YV, Stepanov AA, Vasilieva NV, Alabugin IV. Conformational flexibility of fused tetracenedione propellers obtained from one-pot reductive dimerization of acetylenic quinones. J Org Chem 2015; 80:1618-31. [PMID: 25575160 DOI: 10.1021/jo502543b] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/18/2023]
Abstract
Reductive dimerization of acetylenic anthraquinones provides synthetic access to flexible nonplanar polyaromatics with a tetracenedione core. In solution, these nonplanar, contorted polycycles exist as equilibrating mixtures of two symmetric conformers. The fused tetracenediones are easily reduced and exhibit rich electrochemical behavior.
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Affiliation(s)
- Sergei F Vasilevsky
- Institute of Chemical Kinetics and Combustion, Siberian Branch of the Russian Academy of Sciences , 3 Institutskaya Street, 630090 Novosibirsk, Russian Federation
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38
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Pati K, dos Passos Gomes G, Harris T, Hughes A, Phan H, Banerjee T, Hanson K, Alabugin IV. Traceless Directing Groups in Radical Cascades: From Oligoalkynes to Fused Helicenes without Tethered Initiators. J Am Chem Soc 2015; 137:1165-80. [DOI: 10.1021/ja510563d] [Citation(s) in RCA: 82] [Impact Index Per Article: 8.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]
Affiliation(s)
- Kamalkishore Pati
- Department of Chemistry and
Biochemistry, Florida State University, Tallahassee, Florida 32306-4390, United States
| | - Gabriel dos Passos Gomes
- Department of Chemistry and
Biochemistry, Florida State University, Tallahassee, Florida 32306-4390, United States
| | - Trevor Harris
- Department of Chemistry and
Biochemistry, Florida State University, Tallahassee, Florida 32306-4390, United States
| | - Audrey Hughes
- Department of Chemistry and
Biochemistry, Florida State University, Tallahassee, Florida 32306-4390, United States
| | - Hoa Phan
- Department of Chemistry and
Biochemistry, Florida State University, Tallahassee, Florida 32306-4390, United States
| | - Tanmay Banerjee
- Department of Chemistry and
Biochemistry, Florida State University, Tallahassee, Florida 32306-4390, United States
| | - Kenneth Hanson
- Department of Chemistry and
Biochemistry, Florida State University, Tallahassee, Florida 32306-4390, United States
| | - Igor V. Alabugin
- Department of Chemistry and
Biochemistry, Florida State University, Tallahassee, Florida 32306-4390, United States
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39
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Naresh G, Kant R, Narender T. Copper(II) catalyzed expeditious synthesis of furoquinoxalines through a one-pot three-component coupling strategy. Org Lett 2014; 16:4528-31. [PMID: 25115644 DOI: 10.1021/ol502072k] [Citation(s) in RCA: 36] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2022]
Abstract
Microwave assisted one-pot transformation has been developed for the synthesis of biologically significant polysubstituted furoquinoxalines in good to excellent yields through a copper(II) catalyzed three-component coupling of o-phenylenediamine, ethylglyoxalate, and terminal alkyne, known as A(3)-coupling, followed by 5-endo-dig cyclization.
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Affiliation(s)
- Gunaganti Naresh
- Medicinal and Process Chemistry Division, §Molecular and Structural Biology Division, CSIR-Central Drug Research Institute , Lucknow-226 031, India
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40
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Mondal S, Gold B, Mohamed RK, Phan H, Alabugin IV. Rerouting Radical Cascades: Intercepting the Homoallyl Ring Expansion in Enyne Cyclizations via C–S Scission. J Org Chem 2014; 79:7491-501. [DOI: 10.1021/jo5012043] [Citation(s) in RCA: 30] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/17/2023]
Affiliation(s)
- Sayantan Mondal
- Department
of Chemistry and Biochemistry, Florida State University, Tallahassee, Florida 32306, United States
| | - Brian Gold
- Department
of Chemistry and Biochemistry, Florida State University, Tallahassee, Florida 32306, United States
| | - Rana K. Mohamed
- Department
of Chemistry and Biochemistry, Florida State University, Tallahassee, Florida 32306, United States
| | - Hoa Phan
- Department
of Chemistry and Biochemistry, Florida State University, Tallahassee, Florida 32306, United States
| | - Igor V. Alabugin
- Department
of Chemistry and Biochemistry, Florida State University, Tallahassee, Florida 32306, United States
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41
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Ghinet A, Gautret P, Hijfte NV, Ledé B, Hénichart JP, Bîcu E, Darbost U, Rigo B, Daïch A. Eaton’s Reagent-Mediated Domino π-Cationic Arylations of Aromatic Carboxylic Acids to Iasi-Red Polymethoxylated Polycyclic Aromatic Hydrocarbons: Products with Unprecedented Biological Activities as Tubulin Polymerization Inhibitors. Chemistry 2014; 20:10117-30. [DOI: 10.1002/chem.201402377] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/26/2014] [Indexed: 01/03/2023]
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42
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Mondal S, Gold B, Mohamed RK, Alabugin IV. Design of Leaving Groups in Radical CC Fragmentations: Through-Bond 2c-3e Interactions in Self-Terminating Radical Cascades. Chemistry 2014; 20:8664-9. [DOI: 10.1002/chem.201402843] [Citation(s) in RCA: 59] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/31/2014] [Indexed: 01/01/2023]
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43
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Pati K, Alabugin IV. Synthesis of Substituted Biaryls through Gold-Catalyzed Petasis-Ferrier Rearrangement of Propargyl Ethers. European J Org Chem 2014. [DOI: 10.1002/ejoc.201402469] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
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44
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Gulevskaya AV, Tyaglivy AS, Pozharskii AF, Nelina-Nemtseva JI, Steglenko DV. Heterocyclization of Enediynes Promoted by Sodium Azide: A Case of Ambiguity of X-ray Data and Structure Revision. Org Lett 2014; 16:1582-5. [DOI: 10.1021/ol500125j] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/22/2023]
Affiliation(s)
- Anna V. Gulevskaya
- Department of Organic Chemistry, Southern Federal University, Zorge 7, Rostov-on-Don 344090, Russian Federation
| | - Alexander S. Tyaglivy
- Department of Organic Chemistry, Southern Federal University, Zorge 7, Rostov-on-Don 344090, Russian Federation
| | - Alexander F. Pozharskii
- Department of Organic Chemistry, Southern Federal University, Zorge 7, Rostov-on-Don 344090, Russian Federation
| | - Julia I. Nelina-Nemtseva
- Department of Organic Chemistry, Southern Federal University, Zorge 7, Rostov-on-Don 344090, Russian Federation
| | - Dmitry V. Steglenko
- Department of Organic Chemistry, Southern Federal University, Zorge 7, Rostov-on-Don 344090, Russian Federation
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45
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Sivaraman M, Perumal PT. Synthesis of tetracyclic chromenones via platinum(ii) chloride catalysed cascade cyclization of enediyne–enones. Org Biomol Chem 2014; 12:1318-27. [DOI: 10.1039/c3ob41911h] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/24/2023]
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46
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Pati K, Hughes AM, Phan H, Alabugin IV. Exo-DigRadical Cascades of Skipped Enediynes: Building a Naphthalene Moiety within a Polycyclic Framework. Chemistry 2013; 20:390-3. [DOI: 10.1002/chem.201304092] [Citation(s) in RCA: 25] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/22/2013] [Indexed: 01/23/2023]
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47
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Rubio-Pérez L, Azpíroz R, Di Giuseppe A, Polo V, Castarlenas R, Pérez-Torrente JJ, Oro LA. Pyridine-enhanced head-to-tail dimerization of terminal alkynes by a rhodium-N-heterocyclic-carbene catalyst. Chemistry 2013; 19:15304-14. [PMID: 24114872 DOI: 10.1002/chem.201302079] [Citation(s) in RCA: 41] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/30/2013] [Indexed: 11/11/2022]
Abstract
A general regioselective rhodium-catalyzed head-to-tail dimerization of terminal alkynes is presented. The presence of a pyridine ligand (py) in a Rh-N-heterocyclic-carbene (NHC) catalytic system not only dramatically switches the chemoselectivity from alkyne cyclotrimerization to dimerization but also enhances the catalytic activity. Several intermediates have been detected in the catalytic process, including the π-alkyne-coordinated Rh(I) species [RhCl(NHC)(η(2)-HC≡CCH2Ph)(py)] (3) and [RhCl(NHC){η(2)-C(tBu)≡C(E)CH=CHtBu}(py)] (4) and the Rh(III)-hydride-alkynyl species [RhClH{-C≡CSi(Me)3}(IPr)(py)2] (5). Computational DFT studies reveal an operational mechanism consisting of sequential alkyne C-H oxidative addition, alkyne insertion, and reductive elimination. A 2,1-hydrometalation of the alkyne is the more favorable pathway in accordance with a head-to-tail selectivity.
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Affiliation(s)
- Laura Rubio-Pérez
- Departamento Química Inorgánica, Instituto Síntesis Química y Catálisis Homogénea, Universidad de Zaragoza-CSIC, C/Pedro Cerbuna 12, 50009 Zaragoza (Spain)
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48
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Mondal S, Mohamed RK, Manoharan M, Phan H, Alabugin IV. Drawing from a Pool of Radicals for the Design of Selective Enyne Cyclizations. Org Lett 2013; 15:5650-3. [DOI: 10.1021/ol4028072] [Citation(s) in RCA: 45] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Sayantan Mondal
- Department of Chemistry and Biochemistry, Florida State University, Tallahassee, Florida 32306, United States, and School of Science, Engineering and Mathematics, Bethune-Cookman University, Daytona Beach, Florida 32114, United States
| | - Rana K. Mohamed
- Department of Chemistry and Biochemistry, Florida State University, Tallahassee, Florida 32306, United States, and School of Science, Engineering and Mathematics, Bethune-Cookman University, Daytona Beach, Florida 32114, United States
| | - Mariappan Manoharan
- Department of Chemistry and Biochemistry, Florida State University, Tallahassee, Florida 32306, United States, and School of Science, Engineering and Mathematics, Bethune-Cookman University, Daytona Beach, Florida 32114, United States
| | - Hoa Phan
- Department of Chemistry and Biochemistry, Florida State University, Tallahassee, Florida 32306, United States, and School of Science, Engineering and Mathematics, Bethune-Cookman University, Daytona Beach, Florida 32114, United States
| | - Igor V. Alabugin
- Department of Chemistry and Biochemistry, Florida State University, Tallahassee, Florida 32306, United States, and School of Science, Engineering and Mathematics, Bethune-Cookman University, Daytona Beach, Florida 32114, United States
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49
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Chernick ET, Tykwinski RR. Carbon-rich nanostructures: the conversion of acetylenes into materials. J PHYS ORG CHEM 2013. [DOI: 10.1002/poc.3160] [Citation(s) in RCA: 64] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Affiliation(s)
- Erin T. Chernick
- Department of Chemistry and Pharmacy & Interdisciplinary Center for Molecular Materials (ICMM); University of Erlangen-Nuremberg; Henkestrasse 42 91054 Erlangen Germany
| | - Rik R. Tykwinski
- Department of Chemistry and Pharmacy & Interdisciplinary Center for Molecular Materials (ICMM); University of Erlangen-Nuremberg; Henkestrasse 42 91054 Erlangen Germany
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50
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Alabugin IV, Gold B. “Two Functional Groups in One Package”: Using Both Alkyne π-Bonds in Cascade Transformations. J Org Chem 2013; 78:7777-84. [DOI: 10.1021/jo401091w] [Citation(s) in RCA: 86] [Impact Index Per Article: 7.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
Affiliation(s)
- Igor V. Alabugin
- Department of Chemistry and Biochemistry, Florida State University, Tallahassee, Florida 32306-4390,
United States
| | - Brian Gold
- Department of Chemistry and Biochemistry, Florida State University, Tallahassee, Florida 32306-4390,
United States
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