1
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An Z, Zhou W, Zhang Z, Zhang X, Liu Z, Sun Y, Clemens SC, Wu L, Zhao J, Shi Z, Ma X, Yan H, Li G, Cai Y, Yu J, Sun Y, Li S, Zhang Y, Stepanek C, Lohmann G, Dong G, Cheng H, Liu Y, Jin Z, Li T, Hao Y, Lei J, Cai W. Mid-Pleistocene climate transition triggered by Antarctic Ice Sheet growth. Science 2024; 385:560-565. [PMID: 39088600 DOI: 10.1126/science.abn4861] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/30/2021] [Revised: 12/06/2023] [Accepted: 06/28/2024] [Indexed: 08/03/2024]
Abstract
Despite extensive investigation, the nature and causes of the Mid-Pleistocene Transition remain enigmatic. In this work, we assess its linkage to asynchronous development of bipolar ice sheets by synthesizing Pleistocene mid- to high-latitude proxy records linked to hemispheric ice sheet evolution. Our results indicate substantial growth of the Antarctic Ice Sheets (AISs) at 2.0 to 1.25 million years ago, preceding the rapid expansion of Northern Hemisphere Ice Sheets after ~1.25 million years ago. Proxy-model comparisons suggest that AIS and associated Southern Ocean sea ice expansion can induce northern high-latitude cooling and enhanced moisture transport to the Northern Hemisphere, thus triggering the Mid-Pleistocene Transition. The dynamic processes involved are crucial for assessing modern global warming that is already inducing asynchronous bipolar melting of ice sheets.
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Affiliation(s)
- Zhisheng An
- State Key Laboratory of Loess Science, Institute of Earth Environment, Chinese Academy of Sciences, Xi'an 710061, China
- Institute of Global Environmental Change, Xi'an Jiaotong University, Xi'an 710049, China
- Interdisciplinary Research Center of Earth Science Frontier, Beijing Normal University, Beijing 100875, China
| | - Weijian Zhou
- State Key Laboratory of Loess Science, Institute of Earth Environment, Chinese Academy of Sciences, Xi'an 710061, China
- Institute of Global Environmental Change, Xi'an Jiaotong University, Xi'an 710049, China
- Interdisciplinary Research Center of Earth Science Frontier, Beijing Normal University, Beijing 100875, China
| | - Zeke Zhang
- State Key Laboratory of Loess Science, Institute of Earth Environment, Chinese Academy of Sciences, Xi'an 710061, China
- Institute of Global Environmental Change, Xi'an Jiaotong University, Xi'an 710049, China
- Department of Earth and Planetary Sciences, Nanjing University, Nanjing 210023, China
| | - Xu Zhang
- State Key Laboratory of Tibetan Plateau Earth System, Resources and Environment (TPESRE), Institute of Tibetan Plateau Research, Chinese Academy of Sciences, Beijing 100101, China
- British Antarctic Survey, Cambridge CB3 0ET, UK
| | - Zhonghui Liu
- State Key Laboratory of Loess Science, Institute of Earth Environment, Chinese Academy of Sciences, Xi'an 710061, China
- Department of Earth Sciences, The University of Hong Kong, Hong Kong, China
| | - Youbin Sun
- State Key Laboratory of Loess Science, Institute of Earth Environment, Chinese Academy of Sciences, Xi'an 710061, China
- Institute of Global Environmental Change, Xi'an Jiaotong University, Xi'an 710049, China
| | - Steven C Clemens
- Department of Earth, Environmental and Planetary Sciences, Brown University, Providence, RI 02912, USA
| | - Lixin Wu
- Laoshan Laboratory, Qingdao 266000, China
- Key Laboratory of Physical Oceanography/Institute for Advanced Ocean Studies, Ocean University of China, Qingdao 266100, China
| | - Jiaju Zhao
- State Key Laboratory of Loess Science, Institute of Earth Environment, Chinese Academy of Sciences, Xi'an 710061, China
- Institute of Global Environmental Change, Xi'an Jiaotong University, Xi'an 710049, China
| | - Zhengguo Shi
- State Key Laboratory of Loess Science, Institute of Earth Environment, Chinese Academy of Sciences, Xi'an 710061, China
- Institute of Global Environmental Change, Xi'an Jiaotong University, Xi'an 710049, China
| | - Xiaolin Ma
- State Key Laboratory of Loess Science, Institute of Earth Environment, Chinese Academy of Sciences, Xi'an 710061, China
| | - Hong Yan
- State Key Laboratory of Loess Science, Institute of Earth Environment, Chinese Academy of Sciences, Xi'an 710061, China
- Institute of Global Environmental Change, Xi'an Jiaotong University, Xi'an 710049, China
| | - Gaojun Li
- Department of Earth and Planetary Sciences, Nanjing University, Nanjing 210023, China
| | - Yanjun Cai
- Institute of Global Environmental Change, Xi'an Jiaotong University, Xi'an 710049, China
| | - Jimin Yu
- Laoshan Laboratory, Qingdao 266000, China
- Research School of Earth Sciences, Australian National University, Canberra, ACT 2601, Australia
| | - Yuchen Sun
- Alfred Wegener Institute Helmholtz Center for Polar and Marine Research, 27570 Bremerhaven, Germany
| | - Siqi Li
- State Key Laboratory of Tibetan Plateau Earth System, Resources and Environment (TPESRE), Institute of Tibetan Plateau Research, Chinese Academy of Sciences, Beijing 100101, China
| | - Yu'ao Zhang
- State Key Laboratory of Tibetan Plateau Earth System, Resources and Environment (TPESRE), Institute of Tibetan Plateau Research, Chinese Academy of Sciences, Beijing 100101, China
| | - Christian Stepanek
- Alfred Wegener Institute Helmholtz Center for Polar and Marine Research, 27570 Bremerhaven, Germany
| | - Gerrit Lohmann
- Alfred Wegener Institute Helmholtz Center for Polar and Marine Research, 27570 Bremerhaven, Germany
| | - Guocheng Dong
- State Key Laboratory of Loess Science, Institute of Earth Environment, Chinese Academy of Sciences, Xi'an 710061, China
| | - Hai Cheng
- Institute of Global Environmental Change, Xi'an Jiaotong University, Xi'an 710049, China
| | - Yu Liu
- State Key Laboratory of Loess Science, Institute of Earth Environment, Chinese Academy of Sciences, Xi'an 710061, China
| | - Zhangdong Jin
- State Key Laboratory of Loess Science, Institute of Earth Environment, Chinese Academy of Sciences, Xi'an 710061, China
- Institute of Global Environmental Change, Xi'an Jiaotong University, Xi'an 710049, China
| | - Tao Li
- Key Laboratory of Palaeobiology and Petroleum Stratigraphy, Nanjing Institute of Geology and Palaeontology, Chinese Academy of Sciences, Nanjing 210008, China
| | - Yifei Hao
- State Key Laboratory of Loess Science, Institute of Earth Environment, Chinese Academy of Sciences, Xi'an 710061, China
| | - Jing Lei
- State Key Laboratory of Loess Science, Institute of Earth Environment, Chinese Academy of Sciences, Xi'an 710061, China
- Xi'an Institute for Innovative Earth Environment Research, Xi'an 710061, China
| | - Wenju Cai
- State Key Laboratory of Loess Science, Institute of Earth Environment, Chinese Academy of Sciences, Xi'an 710061, China
- Laoshan Laboratory, Qingdao 266000, China
- Key Laboratory of Physical Oceanography/Institute for Advanced Ocean Studies, Ocean University of China, Qingdao 266100, China
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2
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Nyamgerel Y, Han Y, Hwang H, Han C, Hong SB, Do Hur S, Lee J. Climate-related variabilities in the Styx-M ice core record from northern Victoria Land, East Antarctica, during 1979-2014. THE SCIENCE OF THE TOTAL ENVIRONMENT 2024; 935:173319. [PMID: 38777053 DOI: 10.1016/j.scitotenv.2024.173319] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/11/2023] [Revised: 05/13/2024] [Accepted: 05/15/2024] [Indexed: 05/25/2024]
Abstract
The historical climate variability in East Antarctica inferred from ice cores remains under debate owing to the vastness and complexity of the region. This study evaluates the potential climate variabilities in the Styx-M ice core records (δ18O, d-excess, and snow accumulation) from northern Victoria Land adjacent to the Ross Sea sector of East Antarctica during 1979-2014. Results show that the primary moisture source in this area is the Pacific Ocean sector. Although the annual mean δ18O values was limited to directly indicate the temperature changes, a weak relevance between the average δ18O values and the temperature signal during the austral summer season is detectable. δ18O, d-excess, and snow accumulation correlate with sea surface temperature and sea ice extent in the Ross Sea sector. A coupled influence of the SAM, ASL, and ENSO climate indices is expected, because the oceanic environment in this region is influenced by them. The pronounced intrusion of oceanic moisture coupled with atmospheric circulation patterns over the Ross Sea region makes the Styx-M ice core a promising record of the local oceanic conditions, with the snow accumulation rate being a direct proxy. Additionally, the analysis of trace elements from 1979 to 1999 revealed the presence of crustal dust sourced from the Transantarctic Mountains, as well as non-crustal sources, both intricately linked with atmospheric transport. These results demonstrate that the contributions of-and variations in-oceanic conditions associated with atmospheric circulation changes are detectable and dominant in the Styx-M ice core. This study serves as a basis for interpreting longer parts of the Styx-M ice core.
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Affiliation(s)
- Yalalt Nyamgerel
- Department of Science Education, Ewha Womans University, Seoul 120-750, Republic of Korea
| | - Yeongcheol Han
- Division of Glacial Environment Research, Korea Polar Research Institute, Incheon 21990, Republic of Korea
| | - Heejin Hwang
- Division of Glacial Environment Research, Korea Polar Research Institute, Incheon 21990, Republic of Korea
| | - Changhee Han
- Earth System Science Research Center, Yonsei University, Seoul 03722, Republic of Korea
| | - Sang-Bum Hong
- Division of Glacial Environment Research, Korea Polar Research Institute, Incheon 21990, Republic of Korea
| | - Soon Do Hur
- Division of Glacial Environment Research, Korea Polar Research Institute, Incheon 21990, Republic of Korea
| | - Jeonghoon Lee
- Department of Science Education, Ewha Womans University, Seoul 120-750, Republic of Korea.
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3
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Jones N. Freezer holding world's biggest ancient-ice archive to get 'future-proofed'. Nature 2024:10.1038/d41586-024-02287-8. [PMID: 39014206 DOI: 10.1038/d41586-024-02287-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 07/18/2024]
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4
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Lauderdale JM. Ocean iron cycle feedbacks decouple atmospheric CO 2 from meridional overturning circulation changes. Nat Commun 2024; 15:5532. [PMID: 38977666 PMCID: PMC11231327 DOI: 10.1038/s41467-024-49274-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/26/2023] [Accepted: 05/29/2024] [Indexed: 07/10/2024] Open
Abstract
The ocean's Meridional Overturning Circulation (MOC) brings carbon- and nutrient-rich deep waters to the surface around Antarctica. Limited by light and dissolved iron, photosynthetic microbes incompletely consume these nutrients, the extent of which governs the escape of inorganic carbon into the atmosphere. Changes in MOC upwelling may have regulated Southern Ocean outgassing, resulting in glacial-interglacial atmospheric CO2 oscillations. However, numerical models that explore this positive relationship do not typically include a feedback between biological activity and abundance of organic chelating ligands that control dissolved iron availability. Here, I show that incorporating a dynamic ligand parameterization inverts the modelled MOC-atmospheric CO2 relationship: reduced MOC nutrient upwelling decreases biological activity, resulting in scant ligand production, enhanced iron limitation, incomplete nutrient usage, and ocean carbon outgassing, and vice versa. This first-order response suggests iron cycle feedbacks may be a critical driver of the ocean's response to climate changes, independent of external iron supply.
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Affiliation(s)
- Jonathan Maitland Lauderdale
- Department of Earth, Atmospheric and Planetary Sciences, Massachusetts Institute of Technology, 77 Massachusetts Avenue, Cambridge, 02139, MA, USA.
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5
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Cui J, Chen Y, Hines HM, Ma L, Yang W, Wang C, Liu S, Li H, Cai W, Da W, Williams P, Tian L. Does coevolution in refugia drive mimicry in bumble bees? Insights from a South Asian mimicry group. SCIENCE ADVANCES 2024; 10:eadl2286. [PMID: 38865449 PMCID: PMC11168453 DOI: 10.1126/sciadv.adl2286] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/07/2023] [Accepted: 05/09/2024] [Indexed: 06/14/2024]
Abstract
Müllerian mimicry was proposed to be an example of a coevolved mutualism promoted by population isolation in glacial refugia. This, however, has not been well supported in butterfly models. Here, we use genomic data to test this theory while examining the population genetics behind mimetic diversification in a pair of co-mimetic bumble bees, Bombus breviceps Smith and Bombus trifasciatus Smith. In both lineages, populations were structured by geography but not as much by color pattern, suggesting sharing of color alleles across regions of restricted gene flow and formation of mimicry complexes in the absence of genetic differentiation. Demographic analyses showed mismatches between historical effective population size changes and glacial cycles, and niche modeling revealed only mild habitat retraction during glaciation. Moreover, mimetic subpopulations of the same color form in the two lineages only in some cases exhibit similar population history and genetic divergence. Therefore, the current study supports a more complex history in this comimicry than a simple refugium-coevolution model.
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Affiliation(s)
- Jixiang Cui
- Department of Entomology, College of Plant Protection, China Agricultural University, Beijing, China
- MOA Key Lab of Pest Monitoring and Green Management, College of Plant Protection, China Agricultural University, Beijing, China
| | - Yuxin Chen
- Department of Entomology, College of Plant Protection, China Agricultural University, Beijing, China
- MOA Key Lab of Pest Monitoring and Green Management, College of Plant Protection, China Agricultural University, Beijing, China
| | - Heather M. Hines
- Department of Biology, The Pennsylvania State University, University Park, PA, USA
| | - Ling Ma
- Department of Entomology, College of Plant Protection, China Agricultural University, Beijing, China
- MOA Key Lab of Pest Monitoring and Green Management, College of Plant Protection, China Agricultural University, Beijing, China
| | - Wanhu Yang
- Department of Entomology, College of Plant Protection, China Agricultural University, Beijing, China
- MOA Key Lab of Pest Monitoring and Green Management, College of Plant Protection, China Agricultural University, Beijing, China
| | - Chao Wang
- Department of Entomology, College of Plant Protection, China Agricultural University, Beijing, China
- MOA Key Lab of Pest Monitoring and Green Management, College of Plant Protection, China Agricultural University, Beijing, China
| | - Shanlin Liu
- Department of Entomology, College of Plant Protection, China Agricultural University, Beijing, China
- MOA Key Lab of Pest Monitoring and Green Management, College of Plant Protection, China Agricultural University, Beijing, China
- Key Laboratory of Zoological Systematics and Evolution, Institute of Zoology, Chinese Academy of Sciences, Beijing, China
| | - Hu Li
- Department of Entomology, College of Plant Protection, China Agricultural University, Beijing, China
- MOA Key Lab of Pest Monitoring and Green Management, College of Plant Protection, China Agricultural University, Beijing, China
| | - Wanzhi Cai
- Department of Entomology, College of Plant Protection, China Agricultural University, Beijing, China
- MOA Key Lab of Pest Monitoring and Green Management, College of Plant Protection, China Agricultural University, Beijing, China
| | - Wa Da
- Tibet Plateau Institute of Biology, Lhasa, Tibet 850001, China
- Medog Biodiversity Observation and Research Station of Xizang Autonomous Region, Tibet, China
| | - Paul Williams
- Department of Life Sciences, Natural History Museum, London SW7 5BD, UK
| | - Li Tian
- Department of Entomology, College of Plant Protection, China Agricultural University, Beijing, China
- MOA Key Lab of Pest Monitoring and Green Management, College of Plant Protection, China Agricultural University, Beijing, China
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6
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Fordham DA, Brown SC, Canteri E, Austin JJ, Lomolino MV, Haythorne S, Armstrong E, Bocherens H, Manica A, Rey-Iglesia A, Rahbek C, Nogués-Bravo D, Lorenzen ED. 52,000 years of woolly rhinoceros population dynamics reveal extinction mechanisms. Proc Natl Acad Sci U S A 2024; 121:e2316419121. [PMID: 38830089 PMCID: PMC11181021 DOI: 10.1073/pnas.2316419121] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/24/2023] [Accepted: 04/29/2024] [Indexed: 06/05/2024] Open
Abstract
The extinction of the woolly rhinoceros (Coelodonta antiquitatis) at the onset of the Holocene remains an enigma, with conflicting evidence regarding its cause and spatiotemporal dynamics. This partly reflects challenges in determining demographic responses of late Quaternary megafauna to climatic and anthropogenic causal drivers with available genetic and paleontological techniques. Here, we show that elucidating mechanisms of ancient extinctions can benefit from a detailed understanding of fine-scale metapopulation dynamics, operating over many millennia. Using an abundant fossil record, ancient DNA, and high-resolution simulation models, we untangle the ecological mechanisms and causal drivers that are likely to have been integral in the decline and later extinction of the woolly rhinoceros. Our 52,000-y reconstruction of distribution-wide metapopulation dynamics supports a pathway to extinction that began long before the Holocene, when the combination of cooling temperatures and low but sustained hunting by humans trapped woolly rhinoceroses in suboptimal habitats along the southern edge of their range. Modeling indicates that this ecological trap intensified after the end of the last ice age, preventing colonization of newly formed suitable habitats, weakening stabilizing metapopulation processes, triggering the extinction of the woolly rhinoceros in the early Holocene. Our findings suggest that fragmentation and resultant metapopulation dynamics should be explicitly considered in explanations of late Quaternary megafauna extinctions, sending a clarion call to the fragility of the remaining large-bodied grazers restricted to disjunct fragments of poor-quality habitat due to anthropogenic environmental change.
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Affiliation(s)
- Damien A. Fordham
- The Environment Institute, School of Biological Sciences, University of Adelaide, AdelaideSA, 5005, Australia
- Center for Macroecology, Evolution, and Climate, Globe Institute, University of Copenhagen, Copenhagen Ø2100, Denmark
- Center for Global Mountain Biodiversity, Globe Institute, University of Copenhagen, Copenhagen Ø2100, Denmark
| | - Stuart C. Brown
- The Environment Institute, School of Biological Sciences, University of Adelaide, AdelaideSA, 5005, Australia
- Globe Institute, University of Copenhagen, Copenhagen K1350, Denmark
| | - Elisabetta Canteri
- The Environment Institute, School of Biological Sciences, University of Adelaide, AdelaideSA, 5005, Australia
- Center for Macroecology, Evolution, and Climate, Globe Institute, University of Copenhagen, Copenhagen Ø2100, Denmark
| | - Jeremy J. Austin
- The Environment Institute, School of Biological Sciences, University of Adelaide, AdelaideSA, 5005, Australia
| | - Mark V. Lomolino
- Department of Environmental and Forest Biology, College of Environmental Science, Syracuse, NY13210
| | - Sean Haythorne
- The Environment Institute, School of Biological Sciences, University of Adelaide, AdelaideSA, 5005, Australia
- Centre of Excellence for Biosecurity Risk Analysis, School of Biosciences, University of Melbourne, Melbourne, VIC3010, Australia
| | - Edward Armstrong
- Department of Geosciences and Geography, University of Helsinki, Helsinki, FI-00014, Finland
| | - Hervé Bocherens
- Senckenberg Centre for Human Evolution and Palaeoenvironment, Tübingen72074, Germany
- Department of Geosciences, Biogeology, University of Tübingen, Tübingen72074, Germany
| | - Andrea Manica
- Department of Zoology, University of Cambridge, CB23EJCambridge, United Kingdom
| | - Alba Rey-Iglesia
- Globe Institute, University of Copenhagen, Copenhagen K1350, Denmark
| | - Carsten Rahbek
- Center for Macroecology, Evolution, and Climate, Globe Institute, University of Copenhagen, Copenhagen Ø2100, Denmark
- Center for Global Mountain Biodiversity, Globe Institute, University of Copenhagen, Copenhagen Ø2100, Denmark
- Institute of Ecology, Peking University, Beijing100871, China
- Danish Institute for Advanced Study, University of Southern Denmark, Odense M5230, Denmark
| | - David Nogués-Bravo
- Center for Macroecology, Evolution, and Climate, Globe Institute, University of Copenhagen, Copenhagen Ø2100, Denmark
| | - Eline D. Lorenzen
- Globe Institute, University of Copenhagen, Copenhagen K1350, Denmark
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7
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Lu XM, Yu XF, Li GQ, Qu MH, Wang H, Liu C, Man YP, Jiang XH, Li MZ, Wang J, Chen QQ, Lei R, Zhao CC, Zhou YQ, Jiang ZW, Li ZZ, Zheng S, Dong C, Wang BL, Sun YX, Zhang HQ, Li JW, Mo QH, Zhang Y, Lou X, Peng HX, Yi YT, Wang HX, Zhang XJ, Wang YB, Wang D, Li L, Zhang Q, Wang WX, Liu Y, Gao L, Wu JH, Wang YC. Genome assembly of autotetraploid Actinidia arguta highlights adaptive evolution and enables dissection of important economic traits. PLANT COMMUNICATIONS 2024; 5:100856. [PMID: 38431772 PMCID: PMC11211551 DOI: 10.1016/j.xplc.2024.100856] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/28/2023] [Revised: 07/07/2023] [Accepted: 02/28/2024] [Indexed: 03/05/2024]
Abstract
Actinidia arguta, the most widely distributed Actinidia species and the second cultivated species in the genus, can be distinguished from the currently cultivated Actinidia chinensis on the basis of its small and smooth fruit, rapid softening, and excellent cold tolerance. Adaptive evolution of tetraploid Actinidia species and the genetic basis of their important agronomic traits are still unclear. Here, we generated a chromosome-scale genome assembly of an autotetraploid male A. arguta accession. The genome assembly was 2.77 Gb in length with a contig N50 of 9.97 Mb and was anchored onto 116 pseudo-chromosomes. Resequencing and clustering of 101 geographically representative accessions showed that they could be divided into two geographic groups, Southern and Northern, which first diverged 12.9 million years ago. A. arguta underwent two prominent expansions and one demographic bottleneck from the mid-Pleistocene climate transition to the late Pleistocene. Population genomics studies using paleoclimate data enabled us to discern the evolution of the species' adaptation to different historical environments. Three genes (AaCEL1, AaPME1, and AaDOF1) related to flesh softening were identified by multi-omics analysis, and their ability to accelerate flesh softening was verified through transient expression assays. A set of genes that characteristically regulate sexual dimorphism located on the sex chromosome (Chr3) or autosomal chromosomes showed biased expression during stamen or carpel development. This chromosome-level assembly of the autotetraploid A. arguta genome and the genes related to important agronomic traits will facilitate future functional genomics research and improvement of A. arguta.
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Affiliation(s)
- Xue-Mei Lu
- CAS Key Laboratory of Plant Germplasm Enhancement and Specialty Agriculture, Wuhan Botanical Garden, Chinese Academy of Sciences, Wuhan, Hubei, China
| | - Xiao-Fen Yu
- CAS Key Laboratory of Plant Germplasm Enhancement and Specialty Agriculture, Wuhan Botanical Garden, Chinese Academy of Sciences, Wuhan, Hubei, China
| | - Guo-Qiang Li
- Key Laboratory of Western China's Environmental Systems (Ministry of Education), College of Earth and Environmental Sciences, Lanzhou University, Lanzhou, Gansu, China
| | - Ming-Hao Qu
- CAS Key Laboratory of Plant Germplasm Enhancement and Specialty Agriculture, Wuhan Botanical Garden, Chinese Academy of Sciences, Wuhan, Hubei, China; College of Life Sciences, University of Chinese Academy of Sciences, Beijing, China
| | - Huan Wang
- Wuhan Frasergen Bioinformatics Co., Ltd, Wuhan, Hubei, China
| | - Chuang Liu
- Institute of Soil and Fertilizer, Anhui Academy of Agricultural Sciences, Hefei, China
| | - Yu-Ping Man
- CAS Key Laboratory of Plant Germplasm Enhancement and Specialty Agriculture, Wuhan Botanical Garden, Chinese Academy of Sciences, Wuhan, Hubei, China
| | - Xiao-Han Jiang
- CAS Key Laboratory of Plant Germplasm Enhancement and Specialty Agriculture, Wuhan Botanical Garden, Chinese Academy of Sciences, Wuhan, Hubei, China; College of Life Sciences, University of Chinese Academy of Sciences, Beijing, China
| | - Mu-Zi Li
- CAS Key Laboratory of Plant Germplasm Enhancement and Specialty Agriculture, Wuhan Botanical Garden, Chinese Academy of Sciences, Wuhan, Hubei, China; College of Life Sciences, University of Chinese Academy of Sciences, Beijing, China
| | - Jian Wang
- CAS Key Laboratory of Plant Germplasm Enhancement and Specialty Agriculture, Wuhan Botanical Garden, Chinese Academy of Sciences, Wuhan, Hubei, China
| | - Qi-Qi Chen
- CAS Key Laboratory of Plant Germplasm Enhancement and Specialty Agriculture, Wuhan Botanical Garden, Chinese Academy of Sciences, Wuhan, Hubei, China
| | - Rui Lei
- CAS Key Laboratory of Plant Germplasm Enhancement and Specialty Agriculture, Wuhan Botanical Garden, Chinese Academy of Sciences, Wuhan, Hubei, China
| | - Cheng-Cheng Zhao
- CAS Key Laboratory of Plant Germplasm Enhancement and Specialty Agriculture, Wuhan Botanical Garden, Chinese Academy of Sciences, Wuhan, Hubei, China
| | - Yun-Qiu Zhou
- CAS Key Laboratory of Plant Germplasm Enhancement and Specialty Agriculture, Wuhan Botanical Garden, Chinese Academy of Sciences, Wuhan, Hubei, China; College of Life Sciences, University of Chinese Academy of Sciences, Beijing, China
| | - Zheng-Wang Jiang
- CAS Key Laboratory of Plant Germplasm Enhancement and Specialty Agriculture, Wuhan Botanical Garden, Chinese Academy of Sciences, Wuhan, Hubei, China
| | - Zuo-Zhou Li
- CAS Key Laboratory of Plant Germplasm Enhancement and Specialty Agriculture, Wuhan Botanical Garden, Chinese Academy of Sciences, Wuhan, Hubei, China
| | - Shang Zheng
- Wuhan Frasergen Bioinformatics Co., Ltd, Wuhan, Hubei, China
| | - Chang Dong
- College of Agricultural Sciences, Xichang University, Xichang, Sichuan, China
| | - Bai-Lin Wang
- Department of Horticulture, Heilongjiang Academy of Agricultural Sciences, Harbin, Heilongjiang, China
| | - Yan-Xiang Sun
- College of Life Sciences, Langfang Normal University, Langfang, Hebei, China
| | - Hui-Qin Zhang
- Institute of Horticulture, Zhejiang Academy of Agricultural Sciences, Hangzhou, Zhejiang, China
| | - Jie-Wei Li
- Guangxi Institute of Botany, Chinese Academy of Sciences, Guilin, Guangxi, China
| | - Quan-Hui Mo
- Guangxi Institute of Botany, Chinese Academy of Sciences, Guilin, Guangxi, China
| | - Ying Zhang
- Xi'an Botanical Garden of Shaanxi Province, Institute of Botany of Shaanxi Province, Xi'an, Shaanxi, China
| | - Xin Lou
- Institute of Modern Agricultural Research, Dalian University, Dalian, Liaoning, China
| | - Hai-Xu Peng
- Bioinformatics Center, College of Plant Science and Technology, Beijing University of Agriculture, Beijing, China
| | - Ya-Ting Yi
- Bioinformatics Center, College of Plant Science and Technology, Beijing University of Agriculture, Beijing, China
| | - He-Xin Wang
- Institute of Modern Agricultural Research, Dalian University, Dalian, Liaoning, China
| | - Xiu-Jun Zhang
- CAS Key Laboratory of Plant Germplasm Enhancement and Specialty Agriculture, Wuhan Botanical Garden, Chinese Academy of Sciences, Wuhan, Hubei, China
| | - Yi-Bo Wang
- Key Laboratory of Western China's Environmental Systems (Ministry of Education), College of Earth and Environmental Sciences, Lanzhou University, Lanzhou, Gansu, China
| | - Dan Wang
- College of Agriculture, Eastern Liaoning University, Dandong, Liaoning, China
| | - Li Li
- CAS Key Laboratory of Plant Germplasm Enhancement and Specialty Agriculture, Wuhan Botanical Garden, Chinese Academy of Sciences, Wuhan, Hubei, China
| | - Qiong Zhang
- CAS Key Laboratory of Plant Germplasm Enhancement and Specialty Agriculture, Wuhan Botanical Garden, Chinese Academy of Sciences, Wuhan, Hubei, China
| | - Wen-Xia Wang
- Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian, Liaoning, China
| | - Yongbo Liu
- State Environmental Protection Key Laboratory of Regional Eco-process and Function Assessment, Chinese Research Academy of Environmental Sciences, Beijing, China.
| | - Lei Gao
- CAS Key Laboratory of Plant Germplasm Enhancement and Specialty Agriculture, Wuhan Botanical Garden, Chinese Academy of Sciences, Wuhan, Hubei, China; Hubei Hongshan Laboratory, Wuhan, Hubei, China.
| | - Jin-Hu Wu
- The New Zealand Institute for Plant and Food Research Limited, Auckland, New Zealand.
| | - Yan-Chang Wang
- CAS Key Laboratory of Plant Germplasm Enhancement and Specialty Agriculture, Wuhan Botanical Garden, Chinese Academy of Sciences, Wuhan, Hubei, China.
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8
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Kawamura K, Oyabu I. Two decades of deep ice cores from Antarctica. Nature 2024; 630:825-827. [PMID: 38858549 DOI: 10.1038/d41586-024-01507-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/12/2024]
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9
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Noguerales V, Arjona Y, García-Olivares V, Machado A, López H, Patiño J, Emerson BC. Genetic legacies of mega-landslides: Cycles of isolation and contact across flank collapses in an oceanic island. Mol Ecol 2024; 33:e17341. [PMID: 38576177 DOI: 10.1111/mec.17341] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/08/2023] [Revised: 02/16/2024] [Accepted: 02/21/2024] [Indexed: 04/06/2024]
Abstract
Catastrophic flank collapses are recognized as important drivers of insular biodiversity dynamics, through the disruption of species ranges and subsequent allopatric divergence. However, little empirical data supports this conjecture, with their evolutionary consequences remaining poorly understood. Using genome-wide data within a population genomics and phylogenomics framework, we evaluate how mega-landslides have impacted evolutionary and demographic history within a species complex of weevils (Curculionidae) within the Canary Island of Tenerife. We reveal a complex genomic landscape, within which individuals of single ancestry were sampled in areas characterized by long-term geological stability, relative to the timing of flank collapses. In contrast, individuals of admixed ancestry were almost exclusively sampled within the boundaries of flank collapses. Estimated divergence times among ancestral populations aligned with the timings of mega-landslide events. Our results provide first evidence for a cyclical dynamic of range fragmentation and secondary contact across flank collapse landscapes, with support for a model where this dynamic is mediated by Quaternary climate oscillations. The context within which we reveal climate and topography to interact cyclically through time to shape the geographic structure of genetic variation, together with related recent work, highlights the importance of topoclimatic phenomena as an agent of diversification within insular invertebrates.
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Affiliation(s)
- Víctor Noguerales
- Instituto de Productos Naturales y Agrobiología (IPNA-CSIC), San Cristóbal de La Laguna, Canary Islands, Spain
| | - Yurena Arjona
- Instituto de Productos Naturales y Agrobiología (IPNA-CSIC), San Cristóbal de La Laguna, Canary Islands, Spain
- Department of Botany, Ecology and Plant Physiology, University of La Laguna, San Cristóbal de La Laguna, Canary Islands, Spain
| | - Víctor García-Olivares
- Plataforma Genómica de Alto Rendimiento para el Estudio de la Biodiversidad, Instituto de Productos Naturales y Agrobiología (IPNA-CSIC), San Cristóbal de La Laguna, Canary Islands, Spain
- Genomics Division, Instituto Tecnológico y de Energías Renovables (ITER), Santa Cruz de Tenerife, Canary Islands, Spain
| | - Antonio Machado
- C/Chopin 1, San Cristóbal de La Laguna, Canary Islands, Spain
| | - Heriberto López
- Instituto de Productos Naturales y Agrobiología (IPNA-CSIC), San Cristóbal de La Laguna, Canary Islands, Spain
| | - Jairo Patiño
- Instituto de Productos Naturales y Agrobiología (IPNA-CSIC), San Cristóbal de La Laguna, Canary Islands, Spain
- Department of Botany, Ecology and Plant Physiology, University of La Laguna, San Cristóbal de La Laguna, Canary Islands, Spain
| | - Brent C Emerson
- Instituto de Productos Naturales y Agrobiología (IPNA-CSIC), San Cristóbal de La Laguna, Canary Islands, Spain
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10
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Huang W, Xu B, Guo W, Huang Z, Li Y, Wu W. De novo genome assembly and population genomics of a shrub tree Barthea barthei (Hance) krass provide insights into the adaptive color variations. FRONTIERS IN PLANT SCIENCE 2024; 15:1365686. [PMID: 38751846 PMCID: PMC11094225 DOI: 10.3389/fpls.2024.1365686] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 01/04/2024] [Accepted: 04/19/2024] [Indexed: 05/18/2024]
Abstract
Flower color is a classic example of an ecologically important trait under selection in plants. Understanding the genetic mechanisms underlying shifts in flower color can provide key insights into ecological speciation. In this study, we investigated the genetic basis of flower color divergence in Barthea barthei, a shrub tree species exhibiting natural variation in flower color. We assembled a high-quality genome assembly for B. barthei with a contig N50 of 2.39 Mb and a scaffold N50 of 16.21 Mb. The assembly was annotated with 46,430 protein-coding genes and 1,560 non-coding RNAs. Genome synteny analysis revealed two recent tetraploidization events in B. barthei, estimated to have occurred at approximately 17 and 63 million years ago. These tetraploidization events resulted in massive duplicated gene content, with over 70% of genes retained in collinear blocks. Gene family members of the core regulators of the MBW complex were significantly expanded in B. barthei compared to Arabidopsis, suggesting that these duplications may have provided raw genetic material for the evolution of novel regulatory interactions and the diversification of anthocyanin pigmentation. Transcriptome profiling of B. barthei flowers revealed differential expression of 9 transcription factors related to anthocyanin biosynthesis between the two ecotypes. Six of these differentially expressed transcription factors were identified as high-confidence candidates for adaptive evolution based on positive selection signals. This study provides insights into the genetic basis of flower color divergence and the evolutionary mechanisms underlying ecological adaptation in plants.
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Affiliation(s)
- Weicheng Huang
- College of Horticulture and Landscape Architecture, Zhongkai University of Agriculture and Engineering, Guangzhou, China
- South China Botanical Garden, Chinese Academy of Science, Guangzhou, China
| | - Bin Xu
- Guangdong Provincial Key Laboratory of Silviculture, Protection and Utilization, Guangdong Academy of Forestry, Guangzhou, China
| | - Wei Guo
- College of Horticulture and Landscape Architecture, Zhongkai University of Agriculture and Engineering, Guangzhou, China
| | - Zecheng Huang
- College of Horticulture and Landscape Architecture, Zhongkai University of Agriculture and Engineering, Guangzhou, China
| | - Yongquan Li
- College of Horticulture and Landscape Architecture, Zhongkai University of Agriculture and Engineering, Guangzhou, China
| | - Wei Wu
- College of Horticulture and Landscape Architecture, Zhongkai University of Agriculture and Engineering, Guangzhou, China
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11
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Yao Z, Shi X, Yin Q, Jaccard S, Liu Y, Guo Z, Gorbarenko SA, Wang K, Chen T, Wu Z, Nan Q, Zou J, Wang H, Cui J, Wang A, Yang G, Zhu A, Bosin A, Vasilenko Y, Yu Y. Ice sheet and precession controlled subarctic Pacific productivity and upwelling over the last 550,000 years. Nat Commun 2024; 15:3489. [PMID: 38664426 PMCID: PMC11045732 DOI: 10.1038/s41467-024-47871-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/01/2023] [Accepted: 04/09/2024] [Indexed: 04/28/2024] Open
Abstract
The polar oceans play a vital role in regulating atmospheric CO2 concentrations (pCO2) during the Pleistocene glacial cycles. However, despite being the largest modern reservoir of respired carbon, the impact of the subarctic Pacific remains poorly understood due to limited records. Here, we present high-resolution, 230Th-normalized export productivity records from the subarctic northwestern Pacific covering the last five glacial cycles. Our records display pronounced, glacial-interglacial cyclicity superimposed with precessional-driven variability, with warm interglacial climate and high boreal summer insolation providing favorable conditions to sustain upwelling of nutrient-rich subsurface waters and hence increased export productivity. Our transient model simulations consistently show that ice sheets and to a lesser degree, precession are the main drivers that control the strength and latitudinal position of the westerlies. Enhanced upwelling of nutrient/carbon-rich water caused by the intensification and poleward migration of the northern westerlies during warmer climate intervals would have led to the release of previously sequestered CO2 from the subarctic Pacific to the atmosphere. Our results also highlight the significant role of the subarctic Pacific in modulating pCO2 changes during the Pleistocene climate cycles, especially on precession timescale ( ~ 20 kyr).
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Affiliation(s)
- Zhengquan Yao
- Key Laboratory of Marine Geology and Metallogeny, Shandong Key Laboratory of Deep-Sea Mineral Resources Development, First Institute of Oceanography, MNR, Qingdao, China.
- Laboratory for Marine Geology, Qingdao Marine Science and Technology Center, Qingdao, China.
| | - Xuefa Shi
- Key Laboratory of Marine Geology and Metallogeny, Shandong Key Laboratory of Deep-Sea Mineral Resources Development, First Institute of Oceanography, MNR, Qingdao, China.
- Laboratory for Marine Geology, Qingdao Marine Science and Technology Center, Qingdao, China.
| | - Qiuzhen Yin
- Earth and Climate Research Center, Earth and Life Institute, Université catholique de Louvain, Louvain-la-Neuve, Belgium.
| | - Samuel Jaccard
- Institute of Geological Sciences, University of Lausanne, Lausanne, Switzerland
| | - Yanguang Liu
- Key Laboratory of Marine Geology and Metallogeny, Shandong Key Laboratory of Deep-Sea Mineral Resources Development, First Institute of Oceanography, MNR, Qingdao, China
- Laboratory for Marine Geology, Qingdao Marine Science and Technology Center, Qingdao, China
| | - Zhengtang Guo
- Key Laboratory of Cenozoic Geology and Environment, Institute of Geology and Geophysics, Chinese Academy of Sciences, Beijing, China
| | - Sergey A Gorbarenko
- V.I. Il'ichev Pacific Oceanological Institute, Far East Branch of Russian Academy of Science, Vladivostok, Russia
| | - Kunshan Wang
- Key Laboratory of Marine Geology and Metallogeny, Shandong Key Laboratory of Deep-Sea Mineral Resources Development, First Institute of Oceanography, MNR, Qingdao, China
- Laboratory for Marine Geology, Qingdao Marine Science and Technology Center, Qingdao, China
| | - Tianyu Chen
- State Key Laboratory for Mineral Deposits Research, School of Earth Sciences and Engineering, Nanjing University, Nanjing, China
| | - Zhipeng Wu
- Earth and Climate Research Center, Earth and Life Institute, Université catholique de Louvain, Louvain-la-Neuve, Belgium
| | - Qingyun Nan
- Key Laboratory of Marine Geology and Environment, Institute of Oceanology, Chinese Academy of Sciences, Qingdao, China
| | - Jianjun Zou
- Key Laboratory of Marine Geology and Metallogeny, Shandong Key Laboratory of Deep-Sea Mineral Resources Development, First Institute of Oceanography, MNR, Qingdao, China
- Laboratory for Marine Geology, Qingdao Marine Science and Technology Center, Qingdao, China
| | - Hongmin Wang
- Key Laboratory of Marine Geology and Metallogeny, Shandong Key Laboratory of Deep-Sea Mineral Resources Development, First Institute of Oceanography, MNR, Qingdao, China
- Laboratory for Marine Geology, Qingdao Marine Science and Technology Center, Qingdao, China
| | - Jingjing Cui
- Key Laboratory of Marine Geology and Metallogeny, Shandong Key Laboratory of Deep-Sea Mineral Resources Development, First Institute of Oceanography, MNR, Qingdao, China
- Laboratory for Marine Geology, Qingdao Marine Science and Technology Center, Qingdao, China
| | - Anqi Wang
- Key Laboratory of Marine Geology and Metallogeny, Shandong Key Laboratory of Deep-Sea Mineral Resources Development, First Institute of Oceanography, MNR, Qingdao, China
- State Key Laboratory for Mineral Deposits Research, School of Earth Sciences and Engineering, Nanjing University, Nanjing, China
| | - Gongxu Yang
- Key Laboratory of Marine Geology and Metallogeny, Shandong Key Laboratory of Deep-Sea Mineral Resources Development, First Institute of Oceanography, MNR, Qingdao, China
| | - Aimei Zhu
- Key Laboratory of Marine Geology and Metallogeny, Shandong Key Laboratory of Deep-Sea Mineral Resources Development, First Institute of Oceanography, MNR, Qingdao, China
- Laboratory for Marine Geology, Qingdao Marine Science and Technology Center, Qingdao, China
| | - Aleksandr Bosin
- V.I. Il'ichev Pacific Oceanological Institute, Far East Branch of Russian Academy of Science, Vladivostok, Russia
| | - Yuriy Vasilenko
- V.I. Il'ichev Pacific Oceanological Institute, Far East Branch of Russian Academy of Science, Vladivostok, Russia
| | - Yonggui Yu
- Key Laboratory of Marine Geology and Metallogeny, Shandong Key Laboratory of Deep-Sea Mineral Resources Development, First Institute of Oceanography, MNR, Qingdao, China
- Laboratory for Marine Geology, Qingdao Marine Science and Technology Center, Qingdao, China
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12
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Cannone N, Malfasi F. Climate change triggered synchronous woody plants recruitment in the last two centuries in the treeline ecotone of the Northern Hemisphere. THE SCIENCE OF THE TOTAL ENVIRONMENT 2024; 921:170953. [PMID: 38365041 DOI: 10.1016/j.scitotenv.2024.170953] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/16/2023] [Revised: 02/01/2024] [Accepted: 02/11/2024] [Indexed: 02/18/2024]
Abstract
Climate change triggers several ecosystem responses, including woody plant encroachment. We analyse woody plant recruitment across the treeline ecotone (the forest-tundra ecotone) of the Northern Hemisphere (NH) over an extended period (1801-2010) and its relation with atmospheric CO2 and air temperature. We detected a synchronous trend of woody plant recruitment across the NH, indicating a major climatic and environmental change, triggered by a combination of CO2 fertilization and air temperature changes. The drivers of woody plant recruitment changed with time: CO2 fertilization was the main driver in the period 1801-1950, while air temperature was the main driver after 1950, despite the drastic acceleration of CO2 increase in the last decades. These data support the hypothesis that we are shifting from a fertilization-dominated to a warming-dominated period. The temporal patterns of woody plant recruitment are consistent with the occurrence of the 1980 regime shift, a major change occurred in the Earth's biophysical systems. Indeed, the recruitment drop promoted by the 1960s-1980s air cooling, was followed by an intensive recruitment increase triggered by the restart of air warming in the last decades. The largest sensitivity and fastest resilience of evergreen and Pinaceae to the restart of air warming allows to hypothesize that, among the woody plant functional and taxonomic groups, they could perform the largest expansion also in future decades.
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Affiliation(s)
- N Cannone
- Università degli Studi dell'Insubria, Dip. Scienze Teoriche e Applicate, Via J.H. Dunant 2, 21100 Varese, Italy; Climate Change Research Center, Insubria University, Via Sant'Abbondio 12, 22100 Como, Italy.
| | - F Malfasi
- Università degli Studi dell'Insubria, Dip. Scienza e Alta Tecnologia, Via Valleggio 11, 22100 Como, Italy; Climate Change Research Center, Insubria University, Via Sant'Abbondio 12, 22100 Como, Italy
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13
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Panitsina VA, Bodrov SY, Boulygina ES, Slobodova NV, Kosintsev PA, Abramson NI. In Search of the Elusive North: Evolutionary History of the Arctic Fox ( Vulpes lagopus) in the Palearctic from the Late Pleistocene to the Recent Inferred from Mitogenomic Data. BIOLOGY 2023; 12:1517. [PMID: 38132343 PMCID: PMC10740874 DOI: 10.3390/biology12121517] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/14/2023] [Revised: 12/07/2023] [Accepted: 12/09/2023] [Indexed: 12/23/2023]
Abstract
Despite the high level of interest, the population history of arctic foxes during the Late Pleistocene and Holocene remains poorly understood. Here we aimed to fill gaps in the demographic and colonization history of the arctic fox by analyzing new ancient DNA data from fossil specimens aged from 50 to 1 thousand years from the Northern and Polar Urals, historic DNA from museum specimens from the Novaya Zemlya Archipelago and the Taymyr Peninsula and supplementing these data by previously published sequences of recent and extinct arctic foxes from other regions. This dataset was used for reconstruction of a time-calibrated phylogeny and a temporal haplotype network covering four time intervals: Late Pleistocene (ranging from 30 to 13 thousand years bp), Holocene (ranging from 4 to 1 thousand years bp), historical (approximately 150 years), and modern. Our results revealed that Late Pleistocene specimens showed no genetic similarity to either modern or historical specimens, thus supporting the earlier hypothesis on local extinction rather than habitat tracking.
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Affiliation(s)
- Valentina A. Panitsina
- Zoological Institute, Russian Academy of Sciences, 199034 Saint-Petersburg, Russia; (V.A.P.); (S.Y.B.)
| | - Semyon Yu. Bodrov
- Zoological Institute, Russian Academy of Sciences, 199034 Saint-Petersburg, Russia; (V.A.P.); (S.Y.B.)
| | | | | | - Pavel A. Kosintsev
- Institute of Plant and Animal Ecology, Ural Branch, Russian Academy of Sciences, 620144 Yekaterinburg, Russia
| | - Natalia I. Abramson
- Zoological Institute, Russian Academy of Sciences, 199034 Saint-Petersburg, Russia; (V.A.P.); (S.Y.B.)
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14
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Chen L, Di P, Feng J, Chen D, Li N, Li Y. Impact of dust deposition on the growth of marine autotrophic and heterotrophic microorganisms: Evidence from the South China Sea. MARINE POLLUTION BULLETIN 2023; 197:115749. [PMID: 37924735 DOI: 10.1016/j.marpolbul.2023.115749] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/17/2023] [Revised: 10/29/2023] [Accepted: 11/01/2023] [Indexed: 11/06/2023]
Abstract
Aeolian dust can provide nutrients for the ocean and affect the growth of phytoplankton. However, the impacts of dust deposition on autotrophic and heterotrophic microorganisms have rarely been studied. In this study, we conducted two microcosm experiments in the low-nutrient and low-chlorophyll environment of the South China Sea and found that dust did not stimulate the abundance of autotrophic and heterotrophic microorganisms. Our results show that dust contains most of the unreacted iron-bearing minerals, and thus provides limited bioavailable iron and nitrogen for bacterioplankton and phytoplankton growth. These results elucidate the overlooked impacts of the properties of the iron-bearing minerals in aeolian dust on microbial communities, which may play an important role in marine ecosystems and climate change.
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Affiliation(s)
- Linying Chen
- Shanghai Engineering Research Center of Hadal Science and Technology, College of Marine Sciences, Shanghai Ocean University, Shanghai 201306, China
| | - Pengfei Di
- Key Laboratory of Ocean and Marginal Sea Geology, South China Sea Institute of Oceanology, Innovation Academy of South China Sea Ecology and Environmental Engineering, Chinese Academy of Sciences, Guangzhou 510301, China
| | - Junxi Feng
- Key Laboratory of Marine Mineral Resources, Guangzhou Marine Geological Survey, Ministry of Natural Resources, Guangzhou 510075, China
| | - Duofu Chen
- Shanghai Engineering Research Center of Hadal Science and Technology, College of Marine Sciences, Shanghai Ocean University, Shanghai 201306, China
| | - Niu Li
- Key Laboratory of Ocean and Marginal Sea Geology, South China Sea Institute of Oceanology, Innovation Academy of South China Sea Ecology and Environmental Engineering, Chinese Academy of Sciences, Guangzhou 510301, China.
| | - Yazi Li
- Guangdong Provincial Key Laboratory of Single Cell Technology and Application, Department of Biochemistry and Molecular Biology, School of Basic Medical Sciences, Southern Medical University, Guangzhou 510515, China.
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15
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Kong W, Shi S, Peng D, Feng S, Xu L, Wang X, Shen B, Bi Y, Lyu H. Effects of phytohormone on Chlorella vulgaris grown in wastewater-flue gas: C/N/S fixation, wastewater treatment and metabolome analysis. CHEMOSPHERE 2023; 345:140398. [PMID: 37844705 DOI: 10.1016/j.chemosphere.2023.140398] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/22/2023] [Revised: 09/24/2023] [Accepted: 10/08/2023] [Indexed: 10/18/2023]
Abstract
Chlorella vulgaris (C. vulgaris) can provide the means to fix CO2 from complicated flue gas, treat wastewater and reach a sustainable production of petrochemical substitutes simultaneously. However, a prerequisite to achieving this goal is to promote C. vulgaris growth and improve the CO2-to-fatty acids conversion efficiency under different conditions of flue gas and wastewater. Thus, the addition of indole-3-acetic acid (IAA) in C. vulgaris cultivation was proposed. Results showed that C. vulgaris were more easily inhibited by 100 ppm NO and 200 ppm SO2 under low nitrogen (N) condition. NO and SO2 decreased the carbon (C) fixation; but increased N and sulfur (S) fixation. IAA adjusted the content of superoxide dismutase (SOD) and malondialdehyde (MDA), improved the expression of psbA, rbcL, and accD, attenuated the toxicity of NO and SO2 on C. vulgaris, and ultimately improved cell growth (2014.64-2458.16 mgdw·L-1) and restored CO2 fixation rate (170.98-220.92 mg CO2·L-1·d-1). Moreover, wastewater was found to have a high treatment efficiency because C. vulgaris grew well in all treatments, and the maximal removal rates of both N and phosphorus (P) reached 100%. Metabonomic analysis showed that IAA, "NO and SO2" were involved in the down-regulated and up-regulated expression of multiple metabolites, such as fatty acids, amino acids, and carbohydrates. IAA was beneficial for improving lipid accumulation with 24584.21-27634.23 μg g-1, especially monounsaturated fatty acids (MUFAs) dominated by 16-18 C fatty acids, in C. vulgaris cells. It was concluded that IAA enhanced the CO2 fixation, fatty acids production of C. vulgaris and its nutrients removal rate.
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Affiliation(s)
- Wenwen Kong
- Tianjin Key Laboratory of Clean Energy and Pollution Control, School of Energy and Environmental Engineering, Hebei University of Technology, Tianjin, 300401, PR China; Hebei Engineering Research Center of Pollution Control in Power System, Hebei University of Technology, Tianjin, 300401, PR China
| | - Shilin Shi
- Tianjin Key Laboratory of Clean Energy and Pollution Control, School of Energy and Environmental Engineering, Hebei University of Technology, Tianjin, 300401, PR China; Hebei Engineering Research Center of Pollution Control in Power System, Hebei University of Technology, Tianjin, 300401, PR China
| | - Denghui Peng
- Tianjin Key Laboratory of Clean Energy and Pollution Control, School of Energy and Environmental Engineering, Hebei University of Technology, Tianjin, 300401, PR China; Hebei Engineering Research Center of Pollution Control in Power System, Hebei University of Technology, Tianjin, 300401, PR China
| | - Shuo Feng
- Tianjin Key Laboratory of Clean Energy and Pollution Control, School of Energy and Environmental Engineering, Hebei University of Technology, Tianjin, 300401, PR China; Hebei Engineering Research Center of Pollution Control in Power System, Hebei University of Technology, Tianjin, 300401, PR China
| | - Lianfei Xu
- Tianjin Key Laboratory of Clean Energy and Pollution Control, School of Energy and Environmental Engineering, Hebei University of Technology, Tianjin, 300401, PR China; Hebei Engineering Research Center of Pollution Control in Power System, Hebei University of Technology, Tianjin, 300401, PR China
| | - Xin Wang
- Tianjin Key Laboratory of Clean Energy and Pollution Control, School of Energy and Environmental Engineering, Hebei University of Technology, Tianjin, 300401, PR China; Hebei Engineering Research Center of Pollution Control in Power System, Hebei University of Technology, Tianjin, 300401, PR China
| | - Boxiong Shen
- Tianjin Key Laboratory of Clean Energy and Pollution Control, School of Energy and Environmental Engineering, Hebei University of Technology, Tianjin, 300401, PR China; Hebei Engineering Research Center of Pollution Control in Power System, Hebei University of Technology, Tianjin, 300401, PR China.
| | - Yonghong Bi
- State Key Laboratory of Freshwater Ecology and Biotechnology, Institute of Hydrobiology, Chinese Academy of Sciences, Wuhan, 430072, PR China.
| | - Honghong Lyu
- Tianjin Key Laboratory of Clean Energy and Pollution Control, School of Energy and Environmental Engineering, Hebei University of Technology, Tianjin, 300401, PR China; Hebei Engineering Research Center of Pollution Control in Power System, Hebei University of Technology, Tianjin, 300401, PR China.
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16
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Jiang HB, Hutchins DA, Ma W, Zhang RF, Wells M, Jiao N, Wang Y, Chai F. Natural ocean iron fertilization and climate variability over geological periods. GLOBAL CHANGE BIOLOGY 2023; 29:6856-6866. [PMID: 37855153 DOI: 10.1111/gcb.16990] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/18/2023] [Revised: 09/20/2023] [Accepted: 09/27/2023] [Indexed: 10/20/2023]
Abstract
Marine primary producers are largely dependent on and shape the Earth's climate, although their relationship with climate varies over space and time. The growth of phytoplankton and associated marine primary productivity in most of the modern global ocean is limited by the supply of nutrients, including the micronutrient iron. The addition of iron via episodic and frequent events drives the biological carbon pump and promotes the sequestration of atmospheric carbon dioxide (CO2 ) into the ocean. However, the dependence between iron and marine primary producers adaptively changes over different geological periods due to the variation in global climate and environment. In this review, we examined the role and importance of iron in modulating marine primary production during some specific geological periods, that is, the Great Oxidation Event (GOE) during the Huronian glaciation, the Snowball Earth Event during the Cryogenian, the glacial-interglacial cycles during the Pleistocene, and the period from the last glacial maximum to the late Holocene. Only the change trend of iron bioavailability and climate in the glacial-interglacial cycles is consistent with the Iron Hypothesis. During the GOE and the Snowball Earth periods, although the bioavailability of iron in the ocean and the climate changed dramatically, the changing trend of many factors contradicted the Iron Hypothesis. By detangling the relationship among marine primary productivity, iron availability and oceanic environments in different geological periods, this review can offer some new insights for evaluating the impact of ocean iron fertilization on removing CO2 from the atmosphere and regulating the climate.
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Affiliation(s)
- Hai-Bo Jiang
- Key Laboratory of Marine Biotechnology of Zhejiang Province, School of Marine Sciences, Ningbo University, Ningbo, Zhejiang, China
- State Key Laboratory of Satellite Ocean Environment Dynamics, Second Institute of Oceanography, Ministry of Natural Resources, Hangzhou, Zhejiang, China
- Southern Marine Science and Engineering Guangdong Laboratory (Zhuhai), Zhuhai, Guangdong, China
| | - David A Hutchins
- Department of Biological Sciences, University of Southern California, Los Angeles, California, USA
| | - Wentao Ma
- State Key Laboratory of Satellite Ocean Environment Dynamics, Second Institute of Oceanography, Ministry of Natural Resources, Hangzhou, Zhejiang, China
| | - Rui-Feng Zhang
- School of Oceanography, Shanghai Jiaotong University, Shanghai, Shanghai, China
| | - Mark Wells
- State Key Laboratory of Satellite Ocean Environment Dynamics, Second Institute of Oceanography, Ministry of Natural Resources, Hangzhou, Zhejiang, China
- School of Marine Sciences, University of Maine, Orono, Maine, USA
| | - Nianzhi Jiao
- State Key Laboratory of Marine Environmental Sciences, Xiamen University, Xiamen, Fujian, China
| | - Yuntao Wang
- State Key Laboratory of Satellite Ocean Environment Dynamics, Second Institute of Oceanography, Ministry of Natural Resources, Hangzhou, Zhejiang, China
| | - Fei Chai
- State Key Laboratory of Satellite Ocean Environment Dynamics, Second Institute of Oceanography, Ministry of Natural Resources, Hangzhou, Zhejiang, China
- State Key Laboratory of Marine Environmental Sciences, Xiamen University, Xiamen, Fujian, China
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17
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Yu Y, Pi S, Ke T, Zhou B, Chao W, Yang Y, Li Z, Li G, Ren N, Gao X, Lu L. Artificial Soil-Like Material Enhances CO 2 Bio-Valorization into Chemicals in Gas Fermentation. ACS APPLIED MATERIALS & INTERFACES 2023; 15:53488-53497. [PMID: 37929338 DOI: 10.1021/acsami.3c12627] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/07/2023]
Abstract
Gas fermentation offers a carbon-neutral route for producing industrial feedstocks using autotrophic microbes to convert carbon dioxide (CO2) in waste gases, such as industrial emissions and biogas, into valuable chemicals or biofuels. However, slow microbial metabolism owing to low gaseous solubility causes significant challenges in gas fermentation. Although chemical or genetic manipulations have been explored to improve gas fermentation, they are either nonsustainable or complex. Herein, an artificial soil-like material (SLM) inspired by natural soil was fabricated to improve the growth and metabolism ofCupriavidus necatorfor enhanced poly-β-hydroxybutyrate (PHB) biosynthesis from CO2 and hydrogen (H2). Porous SLM comprises low-cost nanoclay, boehmite, and starch and serves as a biocarrier to facilitate the colonization of bacteria and delivery of CO2 to bacteria. With 3.0 g/L SLM addition, the solubility of CO2 in water increased by ∼4 times and biomass and PHB production boosted by 29 and 102%, respectively, in the 24 h culture. In addition, a positive modulation was observed in the metabolism of PHB biosynthesis. PHB biosynthesis-associated gene expression was found to be enhanced in response to the SLM addition. The concentrations of intermediates in the metabolic pathway of PHB biosynthesis, such as pyruvate and acetyl-CoA, as well as reducing energy (ATP and NADPH) significantly increased with SLM addition. SLM also demonstrated the merits of easy fabrication, high stability, recyclability, and plasticity, thereby indicating its considerable potential for large-scale application in gas fermentation.
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Affiliation(s)
- Yongjie Yu
- State Key Laboratory of Urban Water Resource and Environment, School of Civil and Environmental Engineering, Harbin Institute of Technology, Shenzhen 518055, China
| | - Shanshan Pi
- State Key Laboratory of Urban Water Resource and Environment, School of Civil and Environmental Engineering, Harbin Institute of Technology, Shenzhen 518055, China
| | - Tan Ke
- State Key Laboratory of Urban Water Resource and Environment, School of Civil and Environmental Engineering, Harbin Institute of Technology, Shenzhen 518055, China
| | - Baiqin Zhou
- State Key Laboratory of Urban Water Resource and Environment, School of Civil and Environmental Engineering, Harbin Institute of Technology, Shenzhen 518055, China
| | - Weixiang Chao
- State Key Laboratory of Urban Water Resource and Environment, School of Civil and Environmental Engineering, Harbin Institute of Technology, Shenzhen 518055, China
| | - Yang Yang
- State Key Laboratory of Urban Water Resource and Environment, School of Civil and Environmental Engineering, Harbin Institute of Technology, Shenzhen 518055, China
| | - Zhida Li
- State Key Laboratory of Urban Water Resource and Environment, School of Civil and Environmental Engineering, Harbin Institute of Technology, Shenzhen 518055, China
| | - Guifeng Li
- State Key Laboratory of Urban Water Resource and Environment, School of Civil and Environmental Engineering, Harbin Institute of Technology, Shenzhen 518055, China
| | - Nanqi Ren
- State Key Laboratory of Urban Water Resource and Environment, School of Civil and Environmental Engineering, Harbin Institute of Technology, Shenzhen 518055, China
| | - Xiang Gao
- Center for Materials Synthetic Biology, CAS Key Laboratory of Quantitative Engineering Biology of CAS, Shenzhen Institute of Synthetic Biology, Shenzhen Institutes of Advanced Technology, Chinese Academic of Science, Shenzhen 518000, China
| | - Lu Lu
- State Key Laboratory of Urban Water Resource and Environment, School of Civil and Environmental Engineering, Harbin Institute of Technology, Shenzhen 518055, China
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18
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Archer W, Presnyakova D, Aldeias V, Colarossi D, Hutten L, Lauer T, Porraz G, Rossouw L, Shaw M. Late Acheulean occupations at Montagu Cave and the pattern of Middle Pleistocene behavioral change in Western Cape, southern Africa. J Hum Evol 2023; 184:103435. [PMID: 37774470 DOI: 10.1016/j.jhevol.2023.103435] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/01/2023] [Revised: 08/29/2023] [Accepted: 08/30/2023] [Indexed: 10/01/2023]
Abstract
Patterns of so-called modern human behavior are increasingly well documented in an abundance of Middle Stone Age archaeological sites across southern Africa. Contextualized archives directly preceding the southern African Middle Stone Age, however, remain scarce. Current understanding of the terminal Acheulean in southern Africa derives from a small number of localities that are predominantly in the central and northern interior. Many of these localities are surface and deflated contexts, others were excavated prior to the availability of modern field documentation techniques, and yet other relevant assemblages contain low numbers of characteristic artifacts relative to volume of excavated deposit. The site of Montagu Cave, situated in the diverse ecosystem of the Cape Floral Region, South Africa, contains the rare combination of archaeologically rich, laminated and deeply stratified Acheulean layers followed by a younger Middle Stone Age occupation. Yet little is known about the site owing largely to a lack of contextual information associated with the early excavations. Here we present renewed excavation of Levels 21-22 at Montagu Cave, located in the basal Acheulean sequence, including new data on site formation and ecological context, geochronology, and technological variability. We document intensive occupation of the cave by Acheulean tool-producing hominins, likely at the onset of interglacial conditions in MIS 7. New excavations at Montagu Cave suggest that, while Middle Stone Age technologies were practiced by 300 ka in several other regions of Africa, the classic Acheulean persisted later in the Fynbos Biome of the southwestern Cape. We discuss the implications of this regionalized persistence for the biogeography of African later Middle Pleistocene hominin populations, for the ecological drivers of their technological systems, and for the pattern and pace of behavioral change just prior to the proliferation of the southern African later Middle Stone Age.
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Affiliation(s)
- Will Archer
- Max Planck Partner Group, Department of Archaeology and Anthropology, National Museum, Bloemfontein, South Africa; Department of Geology, University of the Free State, Bloemfontein, South Africa.
| | - Darya Presnyakova
- Department of Early Prehistory and Quaternary Ecology, University of Tübingen, Tübingen, Germany; Aix-Marseille Université, CNRS, UMR 7269, Laboratoire Méditerranéen de Préhistoire Europe Afrique (LAMPEA), Aix-en Provence, France
| | - Vera Aldeias
- Interdisciplinary Center for Archaeology and the Evolution of Human Behaviour (ICArEHB), University of Algarve, Faro, Portugal
| | - Debra Colarossi
- Department of Geography and Earth Sciences, Aberystwyth University, Aberystwyth, Wales, United Kingdom
| | - Louisa Hutten
- Department of Archaeology, University of Cape Town, South Africa
| | - Tobias Lauer
- Department of Geosciences, University of Tübingen, Tübingen, Germany
| | - Guillaume Porraz
- Aix-Marseille Université, CNRS, UMR 7269, Laboratoire Méditerranéen de Préhistoire Europe Afrique (LAMPEA), Aix-en Provence, France
| | - Lloyd Rossouw
- Florisbad Quaternary Research Department, National Museum, Bloemfontein, South Africa
| | - Matthew Shaw
- Centre for Archaeological Science, School of Earth, Atmospheric, and Life Sciences, University of Wollongong, Australia
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19
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Sharma A, Chiang RA, Manginell M, Nardi I, Coker EN, Vanegas JM, Rempe SB, Bachand GD. Carbonic Anhydrase Robustness for Use in Nanoscale CO 2 Capture Technologies. ACS OMEGA 2023; 8:37830-37841. [PMID: 37867662 PMCID: PMC10586288 DOI: 10.1021/acsomega.3c02630] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 04/17/2023] [Accepted: 09/08/2023] [Indexed: 10/24/2023]
Abstract
Continued dependence on crude oil and natural gas resources for fossil fuels has caused global atmospheric carbon dioxide (CO2) emissions to increase to record-setting proportions. There is an urgent need for efficient and inexpensive carbon sequestration systems to mitigate large-scale emissions of CO2 from industrial flue gas. Carbonic anhydrase (CA) has shown high potential for enhanced CO2 capture applications compared to conventional absorption-based methods currently utilized in various industrial settings. This study aims to understand structural aspects that contribute to the stability of CA enzymes critical for their applications in industrial processes, which require the ability to withstand conditions different from those in their native environments. Here, we evaluated the thermostability and enzyme activity of mesophilic and thermophilic CA variants at different temperature conditions and in the presence of atmospheric gas pollutants like nitrogen oxides and sulfur oxides. Based on our enzyme activity assays and molecular dynamics simulations, we see increased conformational stability and CA activity levels in thermostable CA variants incubated week-long at different temperature conditions. The thermostable CA variants also retained high levels of CA activity despite changes in solution pH due to increasing NO and SO2 concentrations. A loss of CA activity was observed only at high concentrations of NO/SO2 that possibly can be minimized with the appropriate buffered solutions.
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Affiliation(s)
- Arjun Sharma
- Department
of Physics, The University of Vermont, Burlington, Vermont 05405-0160, United
States
| | - Rong-an Chiang
- Memzyme,
LLC, Albuquerque, New Mexico 87123, United States
| | - Monica Manginell
- Center
for Integrated Nanotechnologies, Sandia
National Laboratories, Albuquerque, New Mexico 87185, United States
| | - Isaac Nardi
- Epigentor
Consultants, Inc., Miami, Florida 87185, United States
| | - Eric N. Coker
- Electronic,
Optical, and Nanomaterials Department, Sandia
National Laboratories, Albuquerque, New Mexico 87185, United States
| | - Juan M. Vanegas
- Department
of Physics, The University of Vermont, Burlington, Vermont 05405-0160, United
States
| | - Susan B. Rempe
- Center
for Integrated Nanotechnologies, Sandia
National Laboratories, Albuquerque, New Mexico 87185, United States
| | - George D. Bachand
- Center
for Integrated Nanotechnologies, Sandia
National Laboratories, Albuquerque, New Mexico 87185, United States
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20
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Li P, Xiao L, Du Q, Quan M, Song Y, He Y, Huang W, Xie J, Lv C, Wang D, Zhou J, Li L, Liu Q, El‐Kassaby YA, Zhang D. Genomic insights into selection for heterozygous alleles and woody traits in Populus tomentosa. PLANT BIOTECHNOLOGY JOURNAL 2023; 21:2002-2018. [PMID: 37392407 PMCID: PMC10502748 DOI: 10.1111/pbi.14108] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/14/2023] [Revised: 05/03/2023] [Accepted: 06/12/2023] [Indexed: 07/03/2023]
Abstract
Heterozygous alleles are widespread in outcrossing and clonally propagated woody plants. The variation in heterozygosity that underlies population adaptive evolution and phenotypic variation, however, remains largely unknown. Here, we describe a de novo chromosome-level genome assembly of Populus tomentosa, an economic and ecologically important native tree in northern China. By resequencing 302 natural accessions, we determined that the South subpopulation (Pop_S) encompasses the ancestral strains of P. tomentosa, while the Northwest subpopulation (Pop_NW) and Northeast subpopulation (Pop_NE) experienced different selection pressures during population evolution, resulting in significant population differentiation and a decrease in the extent of heterozygosity. Analysis of heterozygous selective sweep regions (HSSR) suggested that selection for lower heterozygosity contributed to the local adaptation of P. tomentosa by dwindling gene expression and genetic load in the Pop_NW and Pop_NE subpopulations. Genome-wide association studies (GWAS) revealed that 88 single nucleotide polymorphisms (SNPs) within 63 genes are associated with nine wood composition traits. Among them, the selection for the homozygous AA allele in PtoARF8 is associated with reductions in cellulose and hemicellulose contents by attenuating PtoARF8 expression, and the increase in lignin content is attributable to the selection for decreases in exon heterozygosity in PtoLOX3 during adaptive evolution of natural populations. This study provides novel insights into allelic variations in heterozygosity associated with adaptive evolution of P. tomentosa in response to the local environment and identifies a series of key genes for wood component traits, thereby facilitating genomic-based breeding of important traits in perennial woody plants.
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Affiliation(s)
- Peng Li
- National Engineering Research Center of Tree Breeding and Ecological Restoration, College of Biological Sciences and TechnologyBeijing Forestry UniversityBeijingChina
- Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and TechnologyBeijing Forestry UniversityBeijingChina
| | - Liang Xiao
- National Engineering Research Center of Tree Breeding and Ecological Restoration, College of Biological Sciences and TechnologyBeijing Forestry UniversityBeijingChina
- Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and TechnologyBeijing Forestry UniversityBeijingChina
| | - Qingzhang Du
- National Engineering Research Center of Tree Breeding and Ecological Restoration, College of Biological Sciences and TechnologyBeijing Forestry UniversityBeijingChina
- Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and TechnologyBeijing Forestry UniversityBeijingChina
| | - Mingyang Quan
- National Engineering Research Center of Tree Breeding and Ecological Restoration, College of Biological Sciences and TechnologyBeijing Forestry UniversityBeijingChina
- Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and TechnologyBeijing Forestry UniversityBeijingChina
| | - Yuepeng Song
- National Engineering Research Center of Tree Breeding and Ecological Restoration, College of Biological Sciences and TechnologyBeijing Forestry UniversityBeijingChina
- Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and TechnologyBeijing Forestry UniversityBeijingChina
| | - Yuling He
- National Engineering Research Center of Tree Breeding and Ecological Restoration, College of Biological Sciences and TechnologyBeijing Forestry UniversityBeijingChina
- Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and TechnologyBeijing Forestry UniversityBeijingChina
| | - Weixiong Huang
- National Engineering Research Center of Tree Breeding and Ecological Restoration, College of Biological Sciences and TechnologyBeijing Forestry UniversityBeijingChina
- Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and TechnologyBeijing Forestry UniversityBeijingChina
| | - Jianbo Xie
- National Engineering Research Center of Tree Breeding and Ecological Restoration, College of Biological Sciences and TechnologyBeijing Forestry UniversityBeijingChina
- Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and TechnologyBeijing Forestry UniversityBeijingChina
| | - Chenfei Lv
- National Engineering Research Center of Tree Breeding and Ecological Restoration, College of Biological Sciences and TechnologyBeijing Forestry UniversityBeijingChina
- Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and TechnologyBeijing Forestry UniversityBeijingChina
| | - Dan Wang
- National Engineering Research Center of Tree Breeding and Ecological Restoration, College of Biological Sciences and TechnologyBeijing Forestry UniversityBeijingChina
- Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and TechnologyBeijing Forestry UniversityBeijingChina
| | - Jiaxuan Zhou
- National Engineering Research Center of Tree Breeding and Ecological Restoration, College of Biological Sciences and TechnologyBeijing Forestry UniversityBeijingChina
- Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and TechnologyBeijing Forestry UniversityBeijingChina
| | - Lianzheng Li
- National Engineering Research Center of Tree Breeding and Ecological Restoration, College of Biological Sciences and TechnologyBeijing Forestry UniversityBeijingChina
- Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and TechnologyBeijing Forestry UniversityBeijingChina
| | - Qing Liu
- CSIRO Agriculture and Food, Black MountainCanberraAustralian Capital TerritoryAustralia
| | - Yousry A. El‐Kassaby
- Department of Forest and Conservation Sciences, Faculty of Forestry, Forest Sciences CentreUniversity of British ColumbiaVancouverBritish ColumbiaCanada
| | - Deqiang Zhang
- National Engineering Research Center of Tree Breeding and Ecological Restoration, College of Biological Sciences and TechnologyBeijing Forestry UniversityBeijingChina
- Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and TechnologyBeijing Forestry UniversityBeijingChina
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21
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Senevirathna HL, Wu S, Lee C, Kim JY, Kim SS, Bai K, Wu P. Enhancing MgO efficiency in CO 2 capture: engineered MgO/Mg(OH) 2 composites with Cl -, SO 42-, and PO 43- additives. RSC Adv 2023; 13:27946-27955. [PMID: 37736562 PMCID: PMC10509748 DOI: 10.1039/d3ra04080a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/17/2023] [Accepted: 09/12/2023] [Indexed: 09/23/2023] Open
Abstract
The formation of a MgCO3 shell hampers CO2 capture efficiency in MgO. Our previous studies developed MgO/Mg(OH)2 composites to facilitate CO2 diffusion, improving capture efficiency. However, MgCO3 still formed along the interfaces. To tackle this issue, we engineered the MgO/Mg(OH)2 interfaces by incorporating Cl-, SO42-, and PO43- additives. Novel MgO-H2O-MgX (X = Cl-, SO42-, and PO43-) composites were synthesized to explore the role of additives in preventing MgCO3 formation. MgO-Mg(OH)2-MgCl2 nano-composites displayed enhanced CO2 adsorption and stability. This breakthrough paves the way for effective bio-inspired strategies in overcoming CO2 transport barriers in MgO-based adsorbents.
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Affiliation(s)
- Hasanthi L Senevirathna
- Entropic Interface Group, Engineering Product Development, Singapore University of Technology and Design 8 Somapah Road 487372 Singapore
| | - Shunnian Wu
- Entropic Interface Group, Engineering Product Development, Singapore University of Technology and Design 8 Somapah Road 487372 Singapore
| | - Cathie Lee
- Entropic Interface Group, Engineering Product Development, Singapore University of Technology and Design 8 Somapah Road 487372 Singapore
| | - Jin-Young Kim
- Department of Materials Science and Engineering, Inha University Incheon 22212 Korea
| | - Sang Sub Kim
- Department of Materials Science and Engineering, Inha University Incheon 22212 Korea
| | - Kewu Bai
- Institute of High Performance Computing, Agency for Science, Technology and Research Fusionopolis Way, #16-16 Connexis Singapore 138632 Singapore
| | - Ping Wu
- Entropic Interface Group, Engineering Product Development, Singapore University of Technology and Design 8 Somapah Road 487372 Singapore
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22
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Wolf A, Ersek V, Braun T, French AD, McGee D, Bernasconi SM, Skiba V, Griffiths ML, Johnson KR, Fohlmeister J, Breitenbach SFM, Pausata FSR, Tabor CR, Longman J, Roberts WHG, Chandan D, Peltier WR, Salzmann U, Limbert D, Trinh HQ, Trinh AD. Deciphering local and regional hydroclimate resolves contradicting evidence on the Asian monsoon evolution. Nat Commun 2023; 14:5697. [PMID: 37709741 PMCID: PMC10502020 DOI: 10.1038/s41467-023-41373-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/30/2022] [Accepted: 09/01/2023] [Indexed: 09/16/2023] Open
Abstract
The winter and summer monsoons in Southeast Asia are important but highly variable sources of rainfall. Current understanding of the winter monsoon is limited by conflicting proxy observations, resulting from the decoupling of regional atmospheric circulation patterns and local rainfall dynamics. These signals are difficult to decipher in paleoclimate reconstructions. Here, we present a winter monsoon speleothem record from Southeast Asia covering the Holocene and find that winter and summer rainfall changed synchronously, forced by changes in the Pacific and Indian Oceans. In contrast, regional atmospheric circulation shows an inverse relation between winter and summer controlled by seasonal insolation over the Northern Hemisphere. We show that disentangling the local and regional signal in paleoclimate reconstructions is crucial in understanding and projecting winter and summer monsoon variability in Southeast Asia.
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Affiliation(s)
- Annabel Wolf
- Department of Earth System Science, University of California, Irvine, CA, 92697, USA.
- Department of Geography and Environmental Sciences, Northumbria University Newcastle, Newcastle-upon-Tyne, NE1 8ST, UK.
| | - Vasile Ersek
- Department of Geography and Environmental Sciences, Northumbria University Newcastle, Newcastle-upon-Tyne, NE1 8ST, UK.
| | - Tobias Braun
- Potsdam Institute for Climate Impact Research, 14473, Potsdam, Germany
| | - Amanda D French
- Environmental Research Institute, Waikato University, Hamilton, 3240, New Zealand
| | - David McGee
- Department of Earth, Atmospheric and Planetary Sciences, Massachusetts Institute of Technology, Cambridge, MA, 02139-4307, USA
| | | | - Vanessa Skiba
- Potsdam Institute for Climate Impact Research, 14473, Potsdam, Germany
| | - Michael L Griffiths
- Department of Environmental Science, William Paterson University, Wayne, NJ, 07470, USA
| | - Kathleen R Johnson
- Department of Earth System Science, University of California, Irvine, CA, 92697, USA
| | - Jens Fohlmeister
- Federal Office for Radiations Protection, 10318, Berlin, Germany
| | - Sebastian F M Breitenbach
- Department of Geography and Environmental Sciences, Northumbria University Newcastle, Newcastle-upon-Tyne, NE1 8ST, UK
| | - Francesco S R Pausata
- Department of Earth and Atmospheric Sciences, Centre ESCER (Étude et la Simulation du Climat à l'Échelle Régionale) and GEOTOP (Research Center on the dynamics of the Earth System), University of Quebec in Montreal, Montréal, QC, Canada
| | - Clay R Tabor
- Department of Earth Sciences, University of Connecticut, Storrs, CT, 06269, USA
| | - Jack Longman
- Department of Geography and Environmental Sciences, Northumbria University Newcastle, Newcastle-upon-Tyne, NE1 8ST, UK
- Institute for Chemistry and Biology of the Marine Environment (ICBM), University of Oldenburg, Oldenburg, 26129, Germany
| | - William H G Roberts
- Department of Geography and Environmental Sciences, Northumbria University Newcastle, Newcastle-upon-Tyne, NE1 8ST, UK
| | - Deepak Chandan
- Department of Physics, University of Toronto, 60 St. George Street, Toronto, ON, M5S1A7, Canada
| | - W Richard Peltier
- Department of Physics, University of Toronto, 60 St. George Street, Toronto, ON, M5S1A7, Canada
| | - Ulrich Salzmann
- Department of Geography and Environmental Sciences, Northumbria University Newcastle, Newcastle-upon-Tyne, NE1 8ST, UK
| | | | - Hong Quan Trinh
- Institute of Chemistry, Vietnam Academy of Science and Technology, Ha Noi, 10072, Viet Nam
| | - Anh Duc Trinh
- Nuclear Training Center, Vietnam Atomic Energy Institute, 140 Nguyen Tuan, Thanh Xuan, Ha Noi, 11416, Viet Nam
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23
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Almawgani AHM, Fathy HM, Elsayed HA, Abdelrahman Ali YA, Mehaney A. A promising ultra-sensitive CO 2 sensor at varying concentrations and temperatures based on Fano resonance phenomenon in different 1D phononic crystal designs. Sci Rep 2023; 13:15028. [PMID: 37700005 PMCID: PMC10497549 DOI: 10.1038/s41598-023-41999-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/11/2023] [Accepted: 09/04/2023] [Indexed: 09/14/2023] Open
Abstract
Detecting of the levels of greenhouse gases in the air with high precision and low cost is a very urgent demand for environmental protection. Phononic crystals (PnCs) represent a novel sensor technology, particularly for high-performance sensing applications. This study has been conducted by using two PnC designs (periodic and quasi-periodic) to detect the CO2 pollution in the surrounding air through a wide range of concentrations (0-100%) and temperatures (0-180 °C). The detection process is physically dependent on the displacement of Fano resonance modes. The performance of the sensor is demonstrated for the periodic and Fibonacci quasi-periodic (S3 and S4 sequences) structures. In this regard, the numerical findings revealed that the periodic PnC provides a better performance than the quasi-periodic one with a sensitivity of 31.5 MHz, the quality factor (Q), along with a figure of merit (FOM) of 280 and 95, respectively. In addition, the temperature effects on the Fano resonance mode position were examined. The results showed a pronounced temperature sensitivity with a value of 13.4 MHz/°C through a temperature range of 0-60 °C. The transfer matrix approach has been utilized for modeling the acoustic wave propagation through each PnC design. Accordingly, the proposed sensor has the potential to be implemented in many industrial and biomedical applications as it can be used as a monitor for other greenhouse gases.
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Affiliation(s)
- Abdulkarem H M Almawgani
- Electrical Engineering Department, College of Engineering, Najran University, Najran, Kingdom of Saudi Arabia.
| | - Hamza Makhlouf Fathy
- Physics Department, Faculty of Science, Beni-Suef University, Beni-Suef, 62512, Egypt
| | - Hussein A Elsayed
- Physics Department, Faculty of Science, Beni-Suef University, Beni-Suef, 62512, Egypt
| | - Yahya Ali Abdelrahman Ali
- Information Systems Department, College of Computer Sciences and Information Systems, Najran University, Najran, Saudi Arabia
| | - Ahmed Mehaney
- Physics Department, Faculty of Science, Beni-Suef University, Beni-Suef, 62512, Egypt.
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24
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Yang H, Xin X. CO 2 capture and lipid production performance of microalgae in the S-shaped photobioreactor under different culture modes. Enzyme Microb Technol 2023; 165:110194. [PMID: 36682097 DOI: 10.1016/j.enzmictec.2023.110194] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/02/2022] [Revised: 01/08/2023] [Accepted: 01/10/2023] [Indexed: 01/13/2023]
Abstract
An S-shaped photobioreactor was designed by adding grooves and baffles in the traditional photobioreactor to improve the culture efficiency of microalgae. After that, the parameters of the characterization of the S-shaped photobioreactor, such as the mixing time, gas holdup, and gas-liquid mass transfer coefficient, were determined. The biomass, lipid production rate, and average CO2 capture rate of microalgae were then analyzed under different culture modes. Finally, the feasibility of using digested piggery wastewater combined with simulated flue gas was explored as a culture mode for the microalgae and the lipid properties of the microalgae were analyzed. The results revealed that, at a flow rate of 0.08 vvm, the mixing time was reduced by 8.5 s, the gas hold-up increased by 44.6% and the gas-liquid mass transfer ability was also improved. Improvements were also observed in the biomass values, lipid production rate, and average CO2 capture rate of the microalgae under different culture conditions, with respective values reaching 0.23 g·(L·d)-1, 70.28 mg·(L·d)-1, and 0.43 g·(L·d)-1 under the mixotrophic mode. Additionally, digested piggery wastewater combined with the simulated microalgae flue gas culture was determined to be feasible. The biomass, lipid production rate, and the average CO2 capture rate of microalgae, the values of which were 0.22 g·(L·d)-1, 52.55 mg·(L·d)-1, and 0.41 g·(L·d)-1, respectively. Lipid was observed to have the potential to produce high-quality biofuel.
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Affiliation(s)
- Hao Yang
- School of Resources and Environment, Chengdu University of Information Technology, Chengdu 610225, China
| | - Xin Xin
- School of Resources and Environment, Chengdu University of Information Technology, Chengdu 610225, China.
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25
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Wang T, Wang B, Hua X, Tang H, Zhang Z, Gao R, Qi Y, Zhang Q, Wang G, Yu Z, Huang Y, Zhang Z, Mei J, Wang Y, Zhang Y, Li Y, Meng X, Wang Y, Pan H, Chen S, Li Z, Shi H, Liu X, Deng Z, Chen B, Zhang M, Gu L, Wang J, Ming R, Yao W, Zhang J. A complete gap-free diploid genome in Saccharum complex and the genomic footprints of evolution in the highly polyploid Saccharum genus. NATURE PLANTS 2023; 9:554-571. [PMID: 36997685 DOI: 10.1038/s41477-023-01378-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/24/2022] [Accepted: 02/21/2023] [Indexed: 06/19/2023]
Abstract
A diploid genome in the Saccharum complex facilitates our understanding of evolution in the highly polyploid Saccharum genus. Here we have generated a complete, gap-free genome assembly of Erianthus rufipilus, a diploid species within the Saccharum complex. The complete assembly revealed that centromere satellite homogenization was accompanied by the insertions of Gypsy retrotransposons, which drove centromere diversification. An overall low rate of gene transcription was observed in the palaeo-duplicated chromosome EruChr05 similar to other grasses, which might be regulated by methylation patterns mediated by homologous 24 nt small RNAs, and potentially mediating the functions of many nucleotide-binding site genes. Sequencing data for 211 accessions in the Saccharum complex indicated that Saccharum probably originated in the trans-Himalayan region from a diploid ancestor (x = 10) around 1.9-2.5 million years ago. Our study provides new insights into the origin and evolution of Saccharum and accelerates translational research in cereal genetics and genomics.
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Affiliation(s)
- Tianyou Wang
- National Engineering Research Center for Sugarcane, College of Agriculture, Fujian Agriculture and Forestry University, Fuzhou, China
| | - Baiyu Wang
- State Key Lab for Conservation and Utilization of Subtropical AgroBiological Resources and Guangxi Key Lab for Sugarcane Biology, Guangxi University, Nanning, China
| | - Xiuting Hua
- State Key Lab for Conservation and Utilization of Subtropical AgroBiological Resources and Guangxi Key Lab for Sugarcane Biology, Guangxi University, Nanning, China
| | - Haibao Tang
- Center for Genomics and Biotechnology, Fujian Provincial Key Laboratory of Haixia Applied Plant Systems Biology, Haixia Institute of Science, Fujian Agriculture and Forestry University, Fuzhou, China
| | - Zeyu Zhang
- Basic Forestry and Proteomics Research Center, College of Forestry, Haixia Institute of Science, Fujian Agriculture and Forestry University, Fuzhou, China
| | - Ruiting Gao
- State Key Lab for Conservation and Utilization of Subtropical AgroBiological Resources and Guangxi Key Lab for Sugarcane Biology, Guangxi University, Nanning, China
| | - Yiying Qi
- National Engineering Research Center for Sugarcane, College of Agriculture, Fujian Agriculture and Forestry University, Fuzhou, China
| | - Qing Zhang
- Center for Genomics and Biotechnology, Fujian Provincial Key Laboratory of Haixia Applied Plant Systems Biology, Haixia Institute of Science, Fujian Agriculture and Forestry University, Fuzhou, China
| | - Gang Wang
- Jiangsu Key Laboratory for Bioresources of Saline Soils, Yancheng Teachers University, Yancheng, China
| | - Zehuai Yu
- State Key Lab for Conservation and Utilization of Subtropical AgroBiological Resources and Guangxi Key Lab for Sugarcane Biology, Guangxi University, Nanning, China
| | - Yongji Huang
- Institute of Oceanography, Marine Biotechnology Center, Minjiang University, Fuzhou, China
| | - Zhe Zhang
- Center for Genomics and Biotechnology, Fujian Provincial Key Laboratory of Haixia Applied Plant Systems Biology, Haixia Institute of Science, Fujian Agriculture and Forestry University, Fuzhou, China
| | - Jing Mei
- Center for Genomics and Biotechnology, Fujian Provincial Key Laboratory of Haixia Applied Plant Systems Biology, Haixia Institute of Science, Fujian Agriculture and Forestry University, Fuzhou, China
| | - Yuhao Wang
- National Engineering Research Center for Sugarcane, College of Agriculture, Fujian Agriculture and Forestry University, Fuzhou, China
| | - Yixing Zhang
- Center for Genomics and Biotechnology, Fujian Provincial Key Laboratory of Haixia Applied Plant Systems Biology, Haixia Institute of Science, Fujian Agriculture and Forestry University, Fuzhou, China
| | - Yihan Li
- State Key Lab for Conservation and Utilization of Subtropical AgroBiological Resources and Guangxi Key Lab for Sugarcane Biology, Guangxi University, Nanning, China
| | - Xue Meng
- Center for Genomics and Biotechnology, Fujian Provincial Key Laboratory of Haixia Applied Plant Systems Biology, Haixia Institute of Science, Fujian Agriculture and Forestry University, Fuzhou, China
| | - Yongjun Wang
- National Engineering Research Center for Sugarcane, College of Agriculture, Fujian Agriculture and Forestry University, Fuzhou, China
| | - Haoran Pan
- National Engineering Research Center for Sugarcane, College of Agriculture, Fujian Agriculture and Forestry University, Fuzhou, China
| | - Shuqi Chen
- Center for Genomics and Biotechnology, Fujian Provincial Key Laboratory of Haixia Applied Plant Systems Biology, Haixia Institute of Science, Fujian Agriculture and Forestry University, Fuzhou, China
| | - Zhen Li
- National Engineering Research Center for Sugarcane, College of Agriculture, Fujian Agriculture and Forestry University, Fuzhou, China
| | - Huihong Shi
- Center for Genomics and Biotechnology, Fujian Provincial Key Laboratory of Haixia Applied Plant Systems Biology, Haixia Institute of Science, Fujian Agriculture and Forestry University, Fuzhou, China
| | - Xinlong Liu
- Yunnan Key Laboratory of Sugarcane Genetic Improvement, Sugarcane Research Institute, Yunnan Academy of Agricultural Sciences, Kaiyuan, China
| | - Zuhu Deng
- National Engineering Research Center for Sugarcane, College of Agriculture, Fujian Agriculture and Forestry University, Fuzhou, China
| | - Baoshan Chen
- State Key Lab for Conservation and Utilization of Subtropical AgroBiological Resources and Guangxi Key Lab for Sugarcane Biology, Guangxi University, Nanning, China
| | - Muqing Zhang
- State Key Lab for Conservation and Utilization of Subtropical AgroBiological Resources and Guangxi Key Lab for Sugarcane Biology, Guangxi University, Nanning, China
| | - Lianfeng Gu
- Basic Forestry and Proteomics Research Center, College of Forestry, Haixia Institute of Science, Fujian Agriculture and Forestry University, Fuzhou, China
| | - Jianping Wang
- Department of Agronomy, University of Florida, Gainesville, FL, USA
| | - Ray Ming
- Center for Genomics and Biotechnology, Fujian Provincial Key Laboratory of Haixia Applied Plant Systems Biology, Haixia Institute of Science, Fujian Agriculture and Forestry University, Fuzhou, China
| | - Wei Yao
- State Key Lab for Conservation and Utilization of Subtropical AgroBiological Resources and Guangxi Key Lab for Sugarcane Biology, Guangxi University, Nanning, China.
| | - Jisen Zhang
- State Key Lab for Conservation and Utilization of Subtropical AgroBiological Resources and Guangxi Key Lab for Sugarcane Biology, Guangxi University, Nanning, China.
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26
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Bagniewski W, Rousseau DD, Ghil M. The PaleoJump database for abrupt transitions in past climates. Sci Rep 2023; 13:4472. [PMID: 36934110 PMCID: PMC10024733 DOI: 10.1038/s41598-023-30592-1] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/08/2022] [Accepted: 02/27/2023] [Indexed: 03/20/2023] Open
Abstract
Tipping points (TPs) in Earth's climate system have been the subject of increasing interest and concern in recent years, given the risk that anthropogenic forcing could cause abrupt, potentially irreversible, climate transitions. Paleoclimate records are essential for identifying past TPs and for gaining a thorough understanding of the underlying nonlinearities and bifurcation mechanisms. However, the quality, resolution, and reliability of these records can vary, making it important to carefully select the ones that provide the most accurate representation of past climates. Moreover, as paleoclimate time series vary in their origin, time spans, and periodicities, an objective, automated methodology is crucial for identifying and comparing TPs. To address these challenges, we introduce the open-source PaleoJump database, which contains a collection of carefully selected, high-resolution records originating in ice cores, marine sediments, speleothems, terrestrial records, and lake sediments. These records describe climate variability on centennial, millennial and longer time scales and cover all the continents and ocean basins. We provide an overview of their spatial distribution and discuss the gaps in coverage. Our statistical methodology includes an augmented Kolmogorov-Smirnov test and Recurrence Quantification Analysis; it is applied here, for illustration purposes, to selected records in which abrupt transitions are automatically detected and the presence of potential tipping elements is investigated. These transitions are shown in the PaleoJump database along with other essential information about the records, including location, temporal scale and resolution, as well as temporal plots. This open-source database represents, therefore, a valuable resource for researchers investigating TPs in past climates.
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Affiliation(s)
- Witold Bagniewski
- Department of Geosciences and Laboratoire de Météorologie Dynamique (CNRS and IPSL), École Normale Supérieure, PSL University, Paris, France.
| | - Denis-Didier Rousseau
- Geosciences Montpellier, CNRS, University of Montpellier, Montpellier, France
- Institute of Physics - CSE, Division of Geochronology and Environmental Isotopes, Silesian University of Technology, Gliwice, Poland
- Lamont-Doherty Earth Observatory, Columbia University, New York, USA
| | - Michael Ghil
- Department of Geosciences and Laboratoire de Météorologie Dynamique (CNRS and IPSL), École Normale Supérieure, PSL University, Paris, France
- Department of Atmospheric and Oceanic Sciences, University of California at Los Angeles, Los Angeles, USA
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27
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Gao F, Wu J, Xiao J, Li X, Liao S, Chen W. Spatially explicit carbon emissions by remote sensing and social sensing. ENVIRONMENTAL RESEARCH 2023; 221:115257. [PMID: 36642123 DOI: 10.1016/j.envres.2023.115257] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/28/2022] [Revised: 12/05/2022] [Accepted: 01/09/2023] [Indexed: 06/17/2023]
Abstract
Scientific simulation of carbon emissions is an important prerequisite for achieving low-carbon green development and carbon peak and carbon neutralization. This study proposed a carbon emissions spatialization method based on nighttime light (NTL) remote sensing and municipal electricity social sensing. First, the economics-energy comprehensive index (EECI) was proposed by integrating the NTL and municipal electricity consumption (EC) data. Second, the carbon emissions were spatialized at a fine scale based on NTL, EC, and EECI, respectively. Finally, the geographical detector model was applied to quantify the influencing factors on carbon emissions from the perspectives of individuals and interactions. Results show that combining remote sensing and social sensing data helps depict carbon emissions accurately. The factor analysis found that GDP and population were the basis of carbon emissions, while the secondary industry and urbanization rate were the direct factors. This study is expected to provide constructive suggestions and methods for emission reduction, carbon peak, and carbon neutrality in high-density cities in China.
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Affiliation(s)
- Feng Gao
- Guangzhou Urban Planning & Design Survey Research Institute, Guangzhou, 510060, China; Guangdong Enterprise Key Laboratory for Urban Sensing, Monitoring and Early Warning, Guangzhou, 510060, China
| | - Jie Wu
- Guangzhou Urban Planning & Design Survey Research Institute, Guangzhou, 510060, China; Guangdong Enterprise Key Laboratory for Urban Sensing, Monitoring and Early Warning, Guangzhou, 510060, China.
| | - Jinghao Xiao
- Guangzhou Urban Planning & Design Survey Research Institute, Guangzhou, 510060, China; Guangdong Enterprise Key Laboratory for Urban Sensing, Monitoring and Early Warning, Guangzhou, 510060, China
| | - Xiaohui Li
- Guangzhou Urban Planning & Design Survey Research Institute, Guangzhou, 510060, China; Guangdong Enterprise Key Laboratory for Urban Sensing, Monitoring and Early Warning, Guangzhou, 510060, China
| | - Shunyi Liao
- Guangzhou Urban Planning & Design Survey Research Institute, Guangzhou, 510060, China; Guangdong Enterprise Key Laboratory for Urban Sensing, Monitoring and Early Warning, Guangzhou, 510060, China
| | - Wangyang Chen
- Guangzhou Urban Planning & Design Survey Research Institute, Guangzhou, 510060, China; Guangdong Enterprise Key Laboratory for Urban Sensing, Monitoring and Early Warning, Guangzhou, 510060, China
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28
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East Antarctica ice sheet in Schirmacher Oasis, Central Dronning Maud Land, during the past 158 ka. PROCEEDINGS OF THE INDIAN NATIONAL SCIENCE ACADEMY 2023. [DOI: 10.1007/s43538-023-00154-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/17/2023]
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29
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Duarte AG, Maherali H. Plant response to arbuscular mycorrhizal fungi at CO2 and temperature levels of the past and present. Symbiosis 2023. [DOI: 10.1007/s13199-023-00906-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
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30
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Prehistoric human migration between Sundaland and South Asia was driven by sea-level rise. Commun Biol 2023; 6:150. [PMID: 36739308 PMCID: PMC9899273 DOI: 10.1038/s42003-023-04510-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/05/2022] [Accepted: 01/20/2023] [Indexed: 02/06/2023] Open
Abstract
Rapid sea-level rise between the Last Glacial Maximum (LGM) and the mid-Holocene transformed the Southeast Asian coastal landscape, but the impact on human demography remains unclear. Here, we create a paleogeographic map, focusing on sea-level changes during the period spanning the LGM to the present-day and infer the human population history in Southeast and South Asia using 763 high-coverage whole-genome sequencing datasets from 59 ethnic groups. We show that sea-level rise, in particular meltwater pulses 1 A (MWP1A, ~14,500-14,000 years ago) and 1B (MWP1B, ~11,500-11,000 years ago), reduced land area by over 50% since the LGM, resulting in segregation of local human populations. Following periods of rapid sea-level rises, population pressure drove the migration of Malaysian Negritos into South Asia. Integrated paleogeographic and population genomic analysis demonstrates the earliest documented instance of forced human migration driven by sea-level rise.
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31
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Araki Y, Sota T. Whole-genome resequencing reveals recent divergence of geographic populations of the dung beetle Phelotrupes auratus with color variation. Ecol Evol 2023; 13:e9765. [PMID: 36713480 PMCID: PMC9873872 DOI: 10.1002/ece3.9765] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/21/2022] [Revised: 12/18/2022] [Accepted: 01/09/2023] [Indexed: 01/26/2023] Open
Abstract
Knowledge of population divergence history is key to understanding organism diversification mechanisms. The geotrupid dung beetle Phelotrupes auratus, which inhabits montane forests and exhibits three color forms (red, green, and indigo), diverged into five local populations (west/red, south/green, south/indigo, south/red, and east/red) in the Kinki District of Honshu, Japan, based on the combined interpretation of genetic cluster and color-form data. Here, we estimated the demographic histories of these local populations using the newly assembled draft genome sequence of P. auratus and whole-genome resequencing data obtained from each local population. Using coalescent simulation analysis, we estimated P. auratus population divergences at ca. 3800, 2100, 600, and 200 years ago, with no substantial gene flow between diverged populations, implying the existence of persistent barriers to gene flow. Notably, the last two divergence events led to three local populations with different color forms. The initial divergence may have been affected by climatic cooling around that time, and the last three divergence events may have been associated with the increasing impact of human activities. Both climatic cooling and increasing human activity may have caused habitat fragmentation and a reduction in the numbers of large mammals supplying food (dung) for P. auratus, thereby promoting the decline, segregation, and divergence of local populations. Our research demonstrates that geographic population divergence in an insect with conspicuous differences in traits such as body color may have occurred rapidly under the influence of human activity.
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Affiliation(s)
- Yoshifumi Araki
- Department of Zoology, Graduate School of ScienceKyoto UniversityKyotoJapan
| | - Teiji Sota
- Department of Zoology, Graduate School of ScienceKyoto UniversityKyotoJapan
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32
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Gardette V, Motto-Ros V, Alvarez-Llamas C, Sancey L, Duponchel L, Busser B. Laser-Induced Breakdown Spectroscopy Imaging for Material and Biomedical Applications: Recent Advances and Future Perspectives. Anal Chem 2023; 95:49-69. [PMID: 36625118 DOI: 10.1021/acs.analchem.2c04910] [Citation(s) in RCA: 7] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/11/2023]
Affiliation(s)
- Vincent Gardette
- Université de Lyon, Université Claude Bernard Lyon 1, CNRS, Institut Lumière Matière, 69622 Villeurbanne, France
| | - Vincent Motto-Ros
- Université de Lyon, Université Claude Bernard Lyon 1, CNRS, Institut Lumière Matière, 69622 Villeurbanne, France
| | - César Alvarez-Llamas
- Université de Lyon, Université Claude Bernard Lyon 1, CNRS, Institut Lumière Matière, 69622 Villeurbanne, France
| | - Lucie Sancey
- Univ. Grenoble Alpes, Institute for Advanced Biosciences, Inserm U 1209/CNRS 5309, 38000 Grenoble, France
| | - Ludovic Duponchel
- Univ. Lille, CNRS, UMR 8516 - LASIRE - Laboratoire de Spectroscopie pour Les Interactions, La Réactivité et L'Environnement, Lille F-59000, France
| | - Benoit Busser
- Univ. Grenoble Alpes, Institute for Advanced Biosciences, Inserm U 1209/CNRS 5309, 38000 Grenoble, France.,Department of Laboratory Medicine, Grenoble Alpes University Hospital, 38000 Grenoble, France.,Institut Universitaire de France, 75231 Paris, France
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33
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Du X, Russell JM, Liu Z, Otto-Bliesner BL, Oppo DW, Mohtadi M, Zhu C, Galy VV, Schefuß E, Yan Y, Rosenthal Y, Dubois N, Arbuszewski J, Gao Y. North Atlantic cooling triggered a zonal mode over the Indian Ocean during Heinrich Stadial 1. SCIENCE ADVANCES 2023; 9:eadd4909. [PMID: 36598985 PMCID: PMC9812376 DOI: 10.1126/sciadv.add4909] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 06/23/2022] [Accepted: 11/23/2022] [Indexed: 06/17/2023]
Abstract
Abrupt changes in the Atlantic meridional overturning circulation (AMOC) are thought to affect tropical hydroclimate through adjustment of the latitudinal position of the intertropical convergence zone (ITCZ). Heinrich Stadial 1 (HS1) involves the largest AMOC reduction in recent geological time; however, over the tropical Indian Ocean (IO), proxy records suggest zonal anomalies featuring intense, widespread drought in tropical East Africa versus generally wet but heterogeneous conditions in the Maritime Continent. Here, we synthesize proxy data and an isotope-enabled transient deglacial simulation and show that the southward ITCZ shift over the eastern IO during HS1 strengthens IO Walker circulation, triggering an east-west precipitation dipole across the basin. This dipole reverses the zonal precipitation anomalies caused by the exposed Sunda and Sahul shelves due to glacial lower sea level. Our study illustrates how zonal modes of atmosphere-ocean circulation can amplify or reverse global climate anomalies, highlighting their importance for future climate change.
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Affiliation(s)
- Xiaojing Du
- Department of Earth, Environmental, and Planetary Sciences, Brown University, Providence, RI, USA
- Institute at Brown for Environment and Society, Brown University, Providence, RI, USA
| | - James M. Russell
- Department of Earth, Environmental, and Planetary Sciences, Brown University, Providence, RI, USA
- Institute at Brown for Environment and Society, Brown University, Providence, RI, USA
| | - Zhengyu Liu
- Atmospheric Science Program, Department of Geography, The Ohio State University, Columbus, OH, USA
| | - Bette L. Otto-Bliesner
- Climate and Global Dynamics Laboratory, National Center for Atmospheric Research, Boulder, CO, USA
| | - Delia W. Oppo
- Geology and Geophysics Department, Woods Hole Oceanographic Institution, Woods Hole, MA, USA
| | - Mahyar Mohtadi
- MARUM-Center for Marine Environmental Sciences, University of Bremen, Bremen, Germany
| | - Chenyu Zhu
- Frontier Science Center for Deep Ocean Multispheres and Earth System (FDOMES) and Physical Oceanography Laboratory, Ocean University of China, Qingdao, China
| | - Valier V. Galy
- Department of Marine Chemistry and Geochemistry, Woods Hole Oceanographic Institution, Woods Hole, MA, USA
| | - Enno Schefuß
- MARUM-Center for Marine Environmental Sciences, University of Bremen, Bremen, Germany
| | - Yan Yan
- State Key Laboratory of Isotope Geochemistry, CAS Center for Excellence in Deep Earth Science, Guangzhou Institute of Geochemistry, Chinese Academy of Sciences, Guangzhou, China
| | - Yair Rosenthal
- Department of Marine and Coastal Sciences and Department of Earth and Planetary Sciences, Rutgers, State University of New Jersey, New Brunswick, NJ, USA
| | - Nathalie Dubois
- Department of Surface Waters Research and Management, Eawag, Dübendorf, Switzerland
- Department of Earth Sciences, ETH Zürich, Zürich, Switzerland
| | - Jennifer Arbuszewski
- Geology and Geophysics Department, Woods Hole Oceanographic Institution, Woods Hole, MA, USA
| | - Yu Gao
- Department of Atmospheric and Oceanic Sciences, School of Physics, Peking University, Beijing, China
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34
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Jones TR, Cuffey KM, Roberts WHG, Markle BR, Steig EJ, Stevens CM, Valdes PJ, Fudge TJ, Sigl M, Hughes AG, Morris V, Vaughn BH, Garland J, Vinther BM, Rozmiarek KS, Brashear CA, White JWC. Seasonal temperatures in West Antarctica during the Holocene. Nature 2023; 613:292-297. [PMID: 36631651 PMCID: PMC9834049 DOI: 10.1038/s41586-022-05411-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/26/2021] [Accepted: 10/04/2022] [Indexed: 01/13/2023]
Abstract
The recovery of long-term climate proxy records with seasonal resolution is rare because of natural smoothing processes, discontinuities and limitations in measurement resolution. Yet insolation forcing, a primary driver of multimillennial-scale climate change, acts through seasonal variations with direct impacts on seasonal climate1. Whether the sensitivity of seasonal climate to insolation matches theoretical predictions has not been assessed over long timescales. Here, we analyse a continuous record of water-isotope ratios from the West Antarctic Ice Sheet Divide ice core to reveal summer and winter temperature changes through the last 11,000 years. Summer temperatures in West Antarctica increased through the early-to-mid-Holocene, reached a peak 4,100 years ago and then decreased to the present. Climate model simulations show that these variations primarily reflect changes in maximum summer insolation, confirming the general connection between seasonal insolation and warming and demonstrating the importance of insolation intensity rather than seasonally integrated insolation or season duration2,3. Winter temperatures varied less overall, consistent with predictions from insolation forcing, but also fluctuated in the early Holocene, probably owing to changes in meridional heat transport. The magnitudes of summer and winter temperature changes constrain the lowering of the West Antarctic Ice Sheet surface since the early Holocene to less than 162 m and probably less than 58 m, consistent with geological constraints elsewhere in West Antarctica4-7.
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Affiliation(s)
- Tyler R Jones
- Institute of Arctic and Alpine Research, University of Colorado, Boulder, CO, USA.
| | - Kurt M Cuffey
- Department of Geography, University of California, Berkeley, CA, USA
| | - William H G Roberts
- Geography and Environmental Sciences, Northumbria University, Newcastle-upon-Tyne, UK
| | - Bradley R Markle
- Institute of Arctic and Alpine Research, University of Colorado, Boulder, CO, USA.,Department of Geological Sciences, University of Colorado, Boulder, CO, USA
| | - Eric J Steig
- Department of Earth and Space Sciences, University of Washington, Seattle, WA, USA
| | - C Max Stevens
- Cryospheric Science Laboratory, NASA Goddard Space Flight Center, Greenbelt, MD, USA.,Earth System Science Interdisciplinary Center, University of Maryland, College Park, MD, USA
| | - Paul J Valdes
- School of Geographical Sciences, University of Bristol, Bristol, UK
| | - T J Fudge
- Department of Earth and Space Sciences, University of Washington, Seattle, WA, USA
| | - Michael Sigl
- Climate and Environmental Physics, Physics Institute & Oeschger Centre for Climate Change Research, University of Bern, Bern, Switzerland
| | - Abigail G Hughes
- Institute of Arctic and Alpine Research, University of Colorado, Boulder, CO, USA.,Department of Geological Sciences, University of Colorado, Boulder, CO, USA
| | - Valerie Morris
- Institute of Arctic and Alpine Research, University of Colorado, Boulder, CO, USA
| | - Bruce H Vaughn
- Institute of Arctic and Alpine Research, University of Colorado, Boulder, CO, USA
| | - Joshua Garland
- Center on Narrative, Disinformation and Strategic Influence, Arizona State University, Tempe, AZ, USA
| | - Bo M Vinther
- Centre for Ice and Climate, Niels Bohr Institute, University of Copenhagen, Copenhagen, Denmark
| | - Kevin S Rozmiarek
- Institute of Arctic and Alpine Research, University of Colorado, Boulder, CO, USA.,Department of Geological Sciences, University of Colorado, Boulder, CO, USA
| | - Chloe A Brashear
- Institute of Arctic and Alpine Research, University of Colorado, Boulder, CO, USA.,Department of Geological Sciences, University of Colorado, Boulder, CO, USA
| | - James W C White
- College of Arts and Sciences, University of North Carolina, Chapel Hill, NC, USA
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35
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Burls N, Sagoo N. Increasingly Sophisticated Climate Models Need the Out-Of-Sample Tests Paleoclimates Provide. JOURNAL OF ADVANCES IN MODELING EARTH SYSTEMS 2022; 14:e2022MS003389. [PMID: 37035628 PMCID: PMC10078273 DOI: 10.1029/2022ms003389] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 09/12/2022] [Revised: 11/28/2022] [Accepted: 12/05/2022] [Indexed: 06/19/2023]
Abstract
Climate models are becoming increasingly sophisticated as climate scientists continually work to improve the realism with which the processes influencing Earth's climate are represented. One example is the treatment of cloud microphysics: as complexity is added to cloud microphysical schemes, Earth's energy budget can respond to changes in climate forcings, such as carbon dioxide or aerosols, in new ways. This increase in degrees of freedom has illuminated larger spread in climate sensitivity across the latest generation of climate models participating Coupled Model Intercomparison Project, Phase 6, with more high climate sensitivity models (Zelinka et al., 2020, https://doi.org/10.1029/2019gl085782). Whilst the historical record gives us just over a century of data to apply toward climate sensitivity constraints (e.g., Nijsse et al., 2020, https://doi.org/10.5194/esd-11-737-2020), the ocean is still taking up much of the heat trapped by anthropogenic greenhouse gas emissions and the climate system is far from equilibrium which limits our understanding how climate sensitivity might change in response to long-term forced climate change. Here we discuss the valuable tests that paleoclimate reconstructions can provide the latest generation of climate models, as demonstrated by the recent study of Zhu et al., 2022, https://doi.org/10.1029/2021ms002776. Their study provides an example of the benefits for climate model development when climate models are confronted with simulating climates very different from today. Ideally the climate model development stage under future iterations of CMIP will involve such tests as an effort to constrain global climate sensitivity and the regional patterns of climate, such as polar amplification and subtropical aridification.
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Affiliation(s)
- Natalie Burls
- Department of Atmospheric, Oceanic, and Earth SciencesCenter for Ocean‐Land‐Atmosphere StudiesGeorge Mason UniversityVAFairfaxUSA
| | - Navjit Sagoo
- Department of MeteorologyStockholm UniversityStockholmSweden
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36
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Evidence for late-glacial oceanic carbon redistribution and discharge from the Pacific Southern Ocean. Nat Commun 2022; 13:6250. [PMID: 36369161 PMCID: PMC9652385 DOI: 10.1038/s41467-022-33753-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/23/2021] [Accepted: 09/30/2022] [Indexed: 11/13/2022] Open
Abstract
Southern Ocean deep-water circulation plays a vital role in the global carbon cycle. On geological time scales, upwelling along the Chilean margin likely contributed to the deglacial atmospheric carbon dioxide rise, but little quantitative evidence exists of carbon storage. Here, we develop an X-ray Micro-Computer-Tomography method to assess foraminiferal test dissolution as proxy for paleo-carbonate ion concentrations ([CO32-]). Our subantarctic Southeast Pacific sediment core depth transect shows significant deep-water [CO32-] variations during the Last Glacial Maximum and Deglaciation (10-22 ka BP). We provide evidence for an increase in [CO32-] during the early-deglacial period (15-19 ka BP) in Lower Circumpolar Deepwater. The export of such low-carbon deep-water from the Pacific to the Atlantic contributed to significantly lowered carbon storage within the Southern Ocean, highlighting the importance of a dynamic Pacific-Southern Ocean deep-water reconfiguration for shaping late-glacial oceanic carbon storage, and subsequent deglacial oceanic-atmospheric CO2 transfer.
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37
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Shackleton JD, Follows MJ, Thomas PJ, Omta AW. The Mid-Pleistocene Transition: a delayed response to an increasing positive feedback? CLIMATE DYNAMICS 2022; 60:4083-4098. [PMID: 37292246 PMCID: PMC10244291 DOI: 10.1007/s00382-022-06544-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 05/11/2022] [Accepted: 10/14/2022] [Indexed: 06/10/2023]
Abstract
Glacial-interglacial cycles constitute large natural variations in Earth's climate. The Mid-Pleistocene Transition (MPT) marks a shift of the dominant periodicity of these climate cycles from ∼ 40 to ∼ 100 kyr. Recently, it has been suggested that this shift resulted from a gradual increase in the internal period (or equivalently, a decrease in the natural frequency) of the system. As a result, the system would then have locked to ever higher multiples of the external forcing period. We find that the internal period is sensitive to the strength of positive feedbacks in the climate system. Using a carbon cycle model in which feedbacks between calcifier populations and ocean alkalinity mediate atmospheric CO2 , we simulate stepwise periodicity changes similar to the MPT through such a mechanism. Due to the internal dynamics of the system, the periodicity shift occurs up to millions of years after the change in the feedback strength is imposed. This suggests that the cause for the MPT may have occurred a significant time before the observed periodicity shift.
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Affiliation(s)
- J. D. Shackleton
- Department of Earth, Atmospheric, and Planetary Sciences, Massachusetts Institute of Technology, Cambridge, MA 02139 USA
| | - M. J. Follows
- Department of Earth, Atmospheric, and Planetary Sciences, Massachusetts Institute of Technology, Cambridge, MA 02139 USA
| | - P. J. Thomas
- Department of Mathematics, Applied Mathematics and Statistics, Case Western Reserve University, Cleveland, OH 44106 USA
| | - A. W. Omta
- Department of Earth, Environmental, and Planetary Sciences, Case Western Reserve University, Cleveland, OH 44106 USA
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38
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Du J, Mix AC, Haley BA, Belanger CL, Sharon. Volcanic trigger of ocean deoxygenation during Cordilleran ice sheet retreat. Nature 2022; 611:74-80. [DOI: 10.1038/s41586-022-05267-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/12/2022] [Accepted: 08/23/2022] [Indexed: 11/06/2022]
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39
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Ye L, Yang L, Wang B, Chen G, Jiang L, Hu Z, Shi Z, Liu Y, Chen S. The Chromosome-level genome of Aesculus wilsonii provides new insights into terpenoid biosynthesis and Aesculus evolution. FRONTIERS IN PLANT SCIENCE 2022; 13:1022169. [PMID: 36388583 PMCID: PMC9642078 DOI: 10.3389/fpls.2022.1022169] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 08/18/2022] [Accepted: 09/12/2022] [Indexed: 06/16/2023]
Abstract
Aesculus L. (buckeye and horse chestnut) are woody plant species with important horticultural and medicinal values. Aesculus seeds are widely used as biomedicine and cosmetic ingredients due to their saponins. We report a chromosomal-scale genome of Aesculus wilsonii. Sequences amounting to a total of 579.01 Mb were assembled into 20 chromosomes. More than half of the genome (54.46%) were annotated as repetitive sequences, and 46,914 protein-coding genes were predicted. In addition to the widespread gamma event with core eudicots, a unique whole-genome duplication (WGD) event (17.69 Mya) occurred in Aesculus after buckeye differentiated from longan. Due to WGD events and tandem duplications, the related synthetic genes of triterpene saponins unique to Aesculus increased significantly. Combined with transcriptome characterization, the study preliminarily resolved the biosynthetic pathway of triterpenoid saponins like aescin in A. wilsonii genome. Analyses of the resequencing of 104 buckeye accessions revealed clear relationship between the geographic distribution and genetic differentiation of buckeye trees in China. We found that the buckeye species found in southern Shaanxi is A. wilsonii rather than A. chinensis. Population dynamics analysis further suggests that the population size and evolution of existing buckeye species have been influenced by climate fluctuations during the Pleistocene and recent domestication events. The genome of A. wilsonii and population genomics of Aesculus provide a resource for future research on Hippocastanaceae. These findings will contribute to the utilization and diversity protection of Aesculus.
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Affiliation(s)
- Lichun Ye
- College of Pharmacy, Hubei University of Chinese Medicine, Wuhan, China
| | - Lulu Yang
- Genomics Project Department, Wuhan Benagen Tech Solutions Company Limited, Wuhan, China
| | - Bo Wang
- Hubei Institute for Drug Control, Wuhan, China
| | - Gang Chen
- Genomics Project Department, Wuhan Benagen Tech Solutions Company Limited, Wuhan, China
| | - Liping Jiang
- Department of Pharmacy, Wuhan Hospital of Traditional and Western Medicine, Wuhan, China
| | - Zhigang Hu
- College of Pharmacy, Hubei University of Chinese Medicine, Wuhan, China
| | - Zhaohua Shi
- Key Laboratory of Chinese Medicine Resource and Compound Prescription, Ministry of Education, Hubei University of Chinese Medicine, Wuhan, China
| | - Yifei Liu
- College of Pharmacy, Hubei University of Chinese Medicine, Wuhan, China
| | - Shilin Chen
- College of Pharmacy, Hubei University of Chinese Medicine, Wuhan, China
- Institute of herbgenomics, Chengdu University of Traditional Chinese Medicine, Chengdu, China
- Institute of Chinese Materia Medica, China Academy of Chinese Medical Sciences, Beijing, China
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40
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Khan MA, Sen UR, Khan S, Sengupta S, Shruti S, Naskar S. Manganese based Molecular Water Oxidation Catalyst: From Natural to Artificial Photosynthesis. COMMENT INORG CHEM 2022. [DOI: 10.1080/02603594.2022.2130273] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/17/2022]
Affiliation(s)
| | | | - Sahanwaj Khan
- Department of Chemistry, Birla Institute of Technology-Mesra, Ranchi, India
| | - Swaraj Sengupta
- Department of Chemical Engineering, Birla Institute of Technology-Mesra, Ranchi, India
| | - Sonal Shruti
- Department of Chemistry, Birla Institute of Technology-Mesra, Ranchi, India
| | - Subhendu Naskar
- Department of Chemistry, Birla Institute of Technology-Mesra, Ranchi, India
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41
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Sperling EA, Boag TH, Duncan MI, Endriga CR, Marquez JA, Mills DB, Monarrez PM, Sclafani JA, Stockey RG, Payne JL. Breathless through Time: Oxygen and Animals across Earth's History. THE BIOLOGICAL BULLETIN 2022; 243:184-206. [PMID: 36548971 DOI: 10.1086/721754] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/17/2023]
Abstract
AbstractOxygen levels in the atmosphere and ocean have changed dramatically over Earth history, with major impacts on marine life. Because the early part of Earth's history lacked both atmospheric oxygen and animals, a persistent co-evolutionary narrative has developed linking oxygen change with changes in animal diversity. Although it was long believed that oxygen rose to essentially modern levels around the Cambrian period, a more muted increase is now believed likely. Thus, if oxygen increase facilitated the Cambrian explosion, it did so by crossing critical ecological thresholds at low O2. Atmospheric oxygen likely remained at low or moderate levels through the early Paleozoic era, and this likely contributed to high metazoan extinction rates until oxygen finally rose to modern levels in the later Paleozoic. After this point, ocean deoxygenation (and marine mass extinctions) is increasingly linked to large igneous province eruptions-massive volcanic carbon inputs to the Earth system that caused global warming, ocean acidification, and oxygen loss. Although the timescales of these ancient events limit their utility as exact analogs for modern anthropogenic global change, the clear message from the geologic record is that large and rapid CO2 injections into the Earth system consistently cause the same deadly trio of stressors that are observed today. The next frontier in understanding the impact of oxygen changes (or, more broadly, temperature-dependent hypoxia) in deep time requires approaches from ecophysiology that will help conservation biologists better calibrate the response of the biosphere at large taxonomic, spatial, and temporal scales.
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Extracting causation from millennial-scale climate fluctuations in the last 800 kyr. Sci Rep 2022; 12:15320. [PMID: 36097179 PMCID: PMC9468010 DOI: 10.1038/s41598-022-18406-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/11/2022] [Accepted: 08/10/2022] [Indexed: 11/09/2022] Open
Abstract
The detection of cause-effect relationships from the analysis of paleoclimatic records is a crucial step to disentangle the main mechanisms at work in the climate system. Here, we show that the approach based on the generalized Fluctuation-Dissipation Relation, complemented by the analysis of the Transfer Entropy, allows the causal links to be identified between temperature, CO[Formula: see text] concentration and astronomical forcing during the glacial cycles of the last 800 kyr based on Antarctic ice core records. When considering the whole spectrum of time scales, the results of the analysis suggest that temperature drives CO[Formula: see text] concentration, or that are both driven by the common astronomical forcing. However, considering only millennial-scale fluctuations, the results reveal the presence of more complex causal links, indicating that CO[Formula: see text] variations contribute to driving the changes of temperature on such time scales. The results also evidence a slow temporal variability in the strength of the millennial-scale causal links between temperature and CO[Formula: see text] concentration.
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43
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Wang XL, Zhou JJ, Liu S, Sun YQ, Xiu ZL. In situ carbon dioxide capture to co-produce 1,3-propanediol, biohydrogen and micro-nano calcium carbonate from crude glycerol by Clostridium butyricum. BIOTECHNOLOGY FOR BIOFUELS AND BIOPRODUCTS 2022; 15:91. [PMID: 36057610 PMCID: PMC9440576 DOI: 10.1186/s13068-022-02190-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 01/18/2022] [Accepted: 08/26/2022] [Indexed: 11/30/2022]
Abstract
Background Climate change caused by greenhouse gas emission has become a global hot topic. Although biotechnology is considered as an environmentally friendly method to produce chemicals, almost all biochemicals face carbon dioxide emission from inevitable respiration and energy metabolism of most microorganisms. To cater for the broad prospect of biochemicals, bioprocess optimization of diverse valuable products is becoming increasingly important for environmental sustainability and cleaner production. Based on Ca(OH)2 as a CO2 capture agent and pH regulator, a bioprocess was proposed for co-production of 1,3-propanediol (1,3-PDO), biohydrogen and micro-nano CaCO3 by Clostridium butyricum DL07. Results In fed-batch fermentation, the maximum concentration of 1,3-PDO reached up to 88.6 g/L with an overall productivity of 5.54 g/L/h. This productivity is 31.9% higher than the highest value previously reports (4.20 g/L/h). In addition, the ratio of H2 to CO2 in exhaust gas showed a remarkable 152-fold increase in the 5 M Ca(OH)2 group compared to 5 M NaOH as the CO2 capture agent. Green hydrogen in exhaust gas ranged between 17.2% and 20.2%, with the remainder being N2 with negligible CO2 emissions. During CO2 capture in situ, micro-nano calcite particles of CaCO3 with sizes in the range of 300 nm to 20 µm were formed simultaneously. Moreover, when compared with 5M NaOH group, the concentrations of soluble salts and proteins in the fermentation broth of 5 M Ca(OH)2 group were notably reduced by 53.6% and 44.1%, respectively. The remarkable reduction of soluble salts and proteins would contribute to the separation of 1,3-PDO. Conclusions Ca(OH)2 was used as a CO2 capture agent and pH regulator in this study to promote the production of 1,3-PDO. Meanwhile, micro-nano CaCO3 and green H2 were co-produced. In addition, the soluble salts and proteins in the fermentation broth were significantly reduced. Graphical Abstract ![]()
Supplementary Information The online version contains supplementary material available at 10.1186/s13068-022-02190-2.
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Dasari S, Paris G, Charreau J, Savarino J. Sulfur-isotope anomalies recorded in Antarctic ice cores as a potential proxy for tracing past ozone layer depletion events. PNAS NEXUS 2022; 1:pgac170. [PMID: 36714879 PMCID: PMC9802080 DOI: 10.1093/pnasnexus/pgac170] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 04/07/2022] [Accepted: 08/23/2022] [Indexed: 02/01/2023]
Abstract
Changes in the cosmic-ray background of the Earth can impact the ozone layer. High-energy cosmic events [e.g. supernova (SN)] or rapid changes in the Earth's magnetic field [e.g. geomagnetic Excursion (GE)] can lead to a cascade of cosmic rays. Ensuing chemical reactions can then cause thinning/destruction of the ozone layer-leading to enhanced penetration of harmful ultraviolet (UV) radiation toward the Earth's surface. However, observational evidence for such UV "windows" is still lacking. Here, we conduct a pilot study and investigate this notion during two well-known events: the multiple SN event (≈10 kBP) and the Laschamp GE event (≈41 kBP). We hypothesize that ice-core-Δ33S records-originally used as volcanic fingerprints-can reveal UV-induced background-tropospheric-photochemical imprints during such events. Indeed, we find nonvolcanic S-isotopic anomalies (Δ33S ≠ 0‰) in background Antarctic ice-core sulfate during GE/SN periods, thereby confirming our hypothesis. This suggests that ice-core-Δ33S records can serve as a proxy for past ozone-layer-depletion events.
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Affiliation(s)
| | - Guillaume Paris
- Centre de Recherches Pétrographiques et Géochimiques, Université de Lorraine, CNRS, 54000 Nancy, France
| | - Julien Charreau
- Centre de Recherches Pétrographiques et Géochimiques, Université de Lorraine, CNRS, 54000 Nancy, France
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Levy EJ, Thomas C, Antler G, Gavrieli I, Turchyn A, Grossi V, Ariztegui D, Sivan O. Intensified microbial sulfate reduction in the deep Dead Sea during the early Holocene Mediterranean sapropel 1 deposition. GEOBIOLOGY 2022; 20:518-532. [PMID: 35384246 PMCID: PMC9325388 DOI: 10.1111/gbi.12493] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 05/10/2021] [Revised: 01/25/2022] [Accepted: 03/03/2022] [Indexed: 06/14/2023]
Abstract
The hypersaline Dead Sea and its sediments are natural laboratories for studying extremophile microorganism habitat response to environmental change. In modern times, increased freshwater runoff to the lake surface waters resulted in stratification and dilution of the upper water column followed by microbial blooms. However, whether these events facilitated a microbial response in the deep lake and sediments is obscure. Here we investigate archived evidence of microbial processes and changing regional hydroclimate conditions by reconstructing deep Dead Sea chemical compositions from pore fluid major ion concentration and stable S, O, and C isotopes, together with lipid biomarkers preserved in the hypersaline deep Dead Sea ICDP-drilled core sediments dating to the early Holocene (ca. 10,000 years BP). Following a significant negative lake water balance resulting in salt layer deposits at the start of the Holocene, there was a general period of positive net water balance at 9500-8300 years BP. The pore fluid isotopic composition of sulfate exhibit evidence of intensified microbial sulfate reduction, where both δ34S and δ18O of sulfate show a sharp increase from estimated base values of 15.0‰ and 13.9‰ to 40.2‰ and 20.4‰, respectively, and a δ34S vs. δ18O slope of 0.26. The presence of the n-C17 alkane biomarker in the sediments suggests an increase of cyanobacteria or phytoplankton contribution to the bulk organic matter that reached the deepest parts of the Dead Sea. Although hydrologically disconnected, both the Mediterranean Sea and the Dead Sea microbial ecosystems responded to increased freshwater runoff during the early Holocene, with the former depositing the organic-rich sapropel 1 layer due to anoxic water column conditions. In the Dead Sea prolonged positive net water balance facilitated primary production and algal blooms in the upper waters and intensified microbial sulfate reduction in the hypolimnion and/or at the sediment-brine interface.
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Affiliation(s)
- Elan J. Levy
- Department of Earth and Environmental SciencesBen‐Gurion University of the NegevBeer ShevaIsrael
- Geological Survey of IsraelJerusalemIsrael
- Department of Climate GeochemistryMax Planck Institute for ChemistryMainzGermany
| | - Camille Thomas
- Department of Earth SciencesUniversity of GenevaGenevaSwitzerland
| | - Gilad Antler
- Department of Earth and Environmental SciencesBen‐Gurion University of the NegevBeer ShevaIsrael
- The Interuniversity Institute for Marine Sciences in EilatEilatIsrael
| | | | | | - Vincent Grossi
- Laboratoire de Géologie de LyonUniv. Lyon 1CNRSENSLVilleurbanneFrance
| | - Daniel Ariztegui
- Department of Earth SciencesUniversity of GenevaGenevaSwitzerland
| | - Orit Sivan
- Department of Earth and Environmental SciencesBen‐Gurion University of the NegevBeer ShevaIsrael
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46
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Solovyev VI, Dubatolov VV, Vavilova VY, Kosterin OE. Estimating range disjunction time of the Palearctic Admirals (Limenitis L.) with COI and histone H1 genes. ORG DIVERS EVOL 2022. [DOI: 10.1007/s13127-022-00565-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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47
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Way AM, de la Peña P, de la Peña E, Wadley L. Howiesons Poort backed artifacts provide evidence for social connectivity across southern Africa during the Final Pleistocene. Sci Rep 2022; 12:9227. [PMID: 35680943 PMCID: PMC9184481 DOI: 10.1038/s41598-022-12677-5] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/20/2021] [Accepted: 04/29/2022] [Indexed: 11/24/2022] Open
Abstract
Examining why human populations used specific technologies in the Final Pleistocene is critical to understanding our evolutionary path. A key Final Pleistocene techno-tradition is the Howiesons Poort, which is marked by an increase in behavioral complexity and technological innovation. Central to this techno-tradition is the production of backed artifacts—small, sharp blades likely used as insets in composite tools. Although backed artifacts were manufactured for thousands of years before the Howiesons Poort, this period is marked by a phenomenal increase in their production. In this paper we test both social and environmental hypotheses to explain this phenomenon. We correlate environmental data with changing frequencies of backed artifact production at Sibudu and assess morphological similarity across seven sites in southern Africa. We find that these artifacts are made to a similar template across different regions and that their increased production correlates with multiple paleo-environmental proxies. When compared to an Australian outgroup, the backed artifacts from the seven southern African sites cluster within the larger shape space described by the Australian group. This leads us to argue that the observed standardized across southern Africa is related to cultural similarities and marks a strengthening of long-distance social ties during the MIS4.
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Affiliation(s)
- Amy M Way
- Evolutionary Studies Institute, University of the Witwatersrand, PO Wits, Johannesburg, 2050, South Africa. .,Geoscience and Archaeology, Australian Museum Research Institute, Australian Museum, Sydney, NSW, 2010, Australia. .,Department of Archaeology, School of Philosophical and Historical Inquiry, The University of Sydney, Sydney, NSW, 2006, Australia.
| | - Paloma de la Peña
- Evolutionary Studies Institute, University of the Witwatersrand, PO Wits, Johannesburg, 2050, South Africa.,McDonald Institute for Archaeological Research, Downing Street, Cambridge, CB2 3ER, UK.,Center of Exploration of the Deep Human Journey, University of the Witwatersrand, PO Wits, Johannesburg, 2050, South Africa
| | - Eduardo de la Peña
- Department of Plants & Crops, Faculty of Bioscience Engineering, Ghent University, 9000, Ghent, Belgium.,Instituto de Hortofruticultura Subtropical y Mediterránea "La Mayora (IHSM-UMA-CSIC), Estación Experimental "La Mayora", Málaga, Spain
| | - Lyn Wadley
- Evolutionary Studies Institute, University of the Witwatersrand, PO Wits, Johannesburg, 2050, South Africa
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Marcher A, Bernardo RT, Simões JC, Auger J. Water stable isotopes in snow along a traverse of the West Antarctic Ice Sheet: insights into moisture origins, air-masses distillation history, and climatic value. AN ACAD BRAS CIENC 2022; 94:e20210353. [PMID: 35648989 DOI: 10.1590/0001-3765202220210353] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/10/2021] [Accepted: 01/04/2022] [Indexed: 11/22/2022] Open
Abstract
This study investigated the water isotopic content (δ18O, δD, d-excess) of the surface snow along a 995 km traverse over the West Antarctic Ice Sheet from the Möller Ice Stream - Institute Ice Stream to the upper reaches of the Pine Island Glacier drainage basin. The purpose of this study was to evaluate the climatic record preserved in the snow. We analyzed 92 surface samples (~0.15-0.20 m deep), retrieved during 2014/2015 austral summer from every ~10 km along the traverse route, using the laser spectroscopy technique. We computed the isotopic-geographical characteristics and spatial co-isotopic empirical relationships and compared the isotopic results with the tropospheric mean annual temperature and air mass trajectories. Our isotopic results were sensitive to capturing the well-known climatic asymmetry between the Amundsen-Bellingshausen Sea (ABS; which receives more influence from warmer (oceanic) air masses) and Weddell Sea (WS; more influenced by colder (continental) air masses) sectors. Further, the spatial distribution of δs and d-excess and the co-isotopic relationships reflect two preferential fractionation paths: one from the coast of the ABS sector to the WS sector, and another from the coast of the WS sector to the inland. The Pacific Ocean is confirmed as the primary source of moisture.
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Affiliation(s)
- Andressa Marcher
- Universidade Federal do Rio Grande do Sul, Centro Polar e Climático, Instituto de Geociências, Av. Bento Gonçalves, 9500, 91501-970 Porto Alegre, RS, Brazil
| | - Ronaldo T Bernardo
- Universidade Federal do Rio Grande do Sul, Centro Polar e Climático, Instituto de Geociências, Av. Bento Gonçalves, 9500, 91501-970 Porto Alegre, RS, Brazil
| | - Jefferson C Simões
- Universidade Federal do Rio Grande do Sul, Centro Polar e Climático, Instituto de Geociências, Av. Bento Gonçalves, 9500, 91501-970 Porto Alegre, RS, Brazil.,Climate Change Institute, University of Maine, Orono, ME 04469-5790, USA
| | - Jeffrey Auger
- Universidade Federal do Rio Grande do Sul, Centro Polar e Climático, Instituto de Geociências, Av. Bento Gonçalves, 9500, 91501-970 Porto Alegre, RS, Brazil.,Climate Change Institute, University of Maine, Orono, ME 04469-5790, USA
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49
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Koutsoyiannis D, Onof C, Christofidis A, Kundzewicz ZW. Revisiting causality using stochastics: 2. Applications. Proc Math Phys Eng Sci 2022. [DOI: 10.1098/rspa.2021.0836] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022] Open
Abstract
In a companion paper, we develop the theoretical background of a stochastic approach to causality with the objective of formulating necessary conditions that are operationally useful in identifying or falsifying causality claims. Starting from the idea of stochastic causal systems, the approach extends it to the more general concept of hen-or-egg causality, which includes as special cases the classic causal, and the potentially causal and anti-causal systems. The framework developed is applicable to large-scale open systems, which are neither controllable nor repeatable. In this paper, we illustrate and showcase the proposed framework in a number of case studies. Some of them are controlled synthetic examples and are conducted as a proof of applicability of the theoretical concept, to test the methodology with
a priori
known system properties. Others are real-world studies on interesting scientific problems in geophysics, and in particular hydrology and climatology.
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Affiliation(s)
- Demetris Koutsoyiannis
- Department of Water Resources and Environmental Engineering, School of Civil Engineering, National Technical University of Athens, Athens, Greece
| | - Christian Onof
- Department of Civil and Environmental Engineering, Faculty of Engineering, Imperial College London, London, UK
| | - Antonis Christofidis
- Department of Water Resources and Environmental Engineering, School of Civil Engineering, National Technical University of Athens, Athens, Greece
| | - Zbigniew W. Kundzewicz
- Meteorology Lab, Department of Construction and Geoengineering, Faculty of Environmental Engineering and Mechanical Engineering, Poznan University of Life Sciences, Poznań, Poland
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50
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Kar T, Firoozabadi A. Effective viscosification of supercritical carbon dioxide by oligomers of 1-decene. iScience 2022; 25:104266. [PMID: 35521540 PMCID: PMC9062731 DOI: 10.1016/j.isci.2022.104266] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/17/2022] [Revised: 03/22/2022] [Accepted: 04/12/2022] [Indexed: 11/21/2022] Open
Abstract
Viscosification of carbon dioxide by polymers can make large scale CO2 sequestration safe and efficient. We present solubility of branched hydrocarbon oligomers in CO2 and viscosification measurements at relevant subsurface conditions. Polymers of 1-decene (P1D) with about 20 repeating units are found to be effective in CO2 viscosification, increasing it by 6.5-fold at 1.8 wt% concentration at 308 K and 31 MPa. We reason that methyl groups and branching promote solubility and viscosification. Low molecular weight oligomers can have lower solubility in CO2 than higher molecular weight ones and the trend in solubility is non-monotonic at constant pressure and temperature. Analysis of solubility trend of P1D oligomers in CO2 advances our understanding of molecular structure and functionality and opens the path to engineering of oligomers effective in viscosification and widespread use of CO2. Increasing P1D size has non-monotonic solubility trend in CO2 at moderate pressures P1D solubility in CO2 has monotonic trend at higher pressures Methyl groups enhance solubilization in CO2 An exponential trend observed for relative viscosity with polymer molecular size
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Affiliation(s)
- Taniya Kar
- Reservoir Engineering Research Institute, 595 Lytton Avenue, Suite B, Palo Alto, CA 94301, USA
| | - Abbas Firoozabadi
- Reservoir Engineering Research Institute, 595 Lytton Avenue, Suite B, Palo Alto, CA 94301, USA
- Rice University, Chemical and Biomolecular Engineering Department, Houston, TX 77005, USA
- Corresponding author
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