1
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Zai AT, Stepien AE, Giret N, Hahnloser RHR. Goal-directed vocal planning in a songbird. eLife 2024; 12:RP90445. [PMID: 38959057 PMCID: PMC11221833 DOI: 10.7554/elife.90445] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 07/04/2024] Open
Abstract
Songbirds' vocal mastery is impressive, but to what extent is it a result of practice? Can they, based on experienced mismatch with a known target, plan the necessary changes to recover the target in a practice-free manner without intermittently singing? In adult zebra finches, we drive the pitch of a song syllable away from its stable (baseline) variant acquired from a tutor, then we withdraw reinforcement and subsequently deprive them of singing experience by muting or deafening. In this deprived state, birds do not recover their baseline song. However, they revert their songs toward the target by about 1 standard deviation of their recent practice, provided the sensory feedback during the latter signaled a pitch mismatch with the target. Thus, targeted vocal plasticity does not require immediate sensory experience, showing that zebra finches are capable of goal-directed vocal planning.
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Affiliation(s)
- Anja T Zai
- Neuroscience Center Zurich (ZNZ), University of Zurich and ETH ZurichZurichSwitzerland
- Institute of Neuroinformatics, University of Zurich and ETH ZurichZurichSwitzerland
| | - Anna E Stepien
- Neuroscience Center Zurich (ZNZ), University of Zurich and ETH ZurichZurichSwitzerland
- Institute of Neuroinformatics, University of Zurich and ETH ZurichZurichSwitzerland
| | - Nicolas Giret
- Institut des Neurosciences Paris-Saclay, UMR 9197 CNRS, Université Paris-SaclaySaclayFrance
| | - Richard HR Hahnloser
- Neuroscience Center Zurich (ZNZ), University of Zurich and ETH ZurichZurichSwitzerland
- Institute of Neuroinformatics, University of Zurich and ETH ZurichZurichSwitzerland
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2
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Elemans CPH, Jiang W, Jensen MH, Pichler H, Mussman BR, Nattestad J, Wahlberg M, Zheng X, Xue Q, Fitch WT. Evolutionary novelties underlie sound production in baleen whales. Nature 2024; 627:123-129. [PMID: 38383781 DOI: 10.1038/s41586-024-07080-1] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/10/2023] [Accepted: 01/16/2024] [Indexed: 02/23/2024]
Abstract
Baleen whales (mysticetes) use vocalizations to mediate their complex social and reproductive behaviours in vast, opaque marine environments1. Adapting to an obligate aquatic lifestyle demanded fundamental physiological changes to efficiently produce sound, including laryngeal specializations2-4. Whereas toothed whales (odontocetes) evolved a nasal vocal organ5, mysticetes have been thought to use the larynx for sound production1,6-8. However, there has been no direct demonstration that the mysticete larynx can phonate, or if it does, how it produces the great diversity of mysticete sounds9. Here we combine experiments on the excised larynx of three mysticete species with detailed anatomy and computational models to show that mysticetes evolved unique laryngeal structures for sound production. These structures allow some of the largest animals that ever lived to efficiently produce frequency-modulated, low-frequency calls. Furthermore, we show that this phonation mechanism is likely to be ancestral to all mysticetes and shares its fundamental physical basis with most terrestrial mammals, including humans10, birds11, and their closest relatives, odontocetes5. However, these laryngeal structures set insurmountable physiological limits to the frequency range and depth of their vocalizations, preventing them from escaping anthropogenic vessel noise12,13 and communicating at great depths14, thereby greatly reducing their active communication range.
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Affiliation(s)
- Coen P H Elemans
- Sound Communication and Behaviour Group, Department of Biology, University of Southern Denmark, Odense, Denmark.
| | - Weili Jiang
- Department of Mechanical Engineering, Rochester Institute of Technology, Rochester, NY, USA
| | - Mikkel H Jensen
- Sound Communication and Behaviour Group, Department of Biology, University of Southern Denmark, Odense, Denmark
| | - Helena Pichler
- Department of Behavioral and Cognitive Biology, Faculty of Life Sciences, University of Vienna, Vienna, Austria
| | - Bo R Mussman
- Department of Radiology, Odense University Hospital, Odense, Denmark
- Department of Clinical Research, University of Southern Denmark, Odense, Denmark
| | - Jacob Nattestad
- Department of Radiology, Odense University Hospital, Odense, Denmark
| | - Magnus Wahlberg
- Sound Communication and Behaviour Group, Department of Biology, University of Southern Denmark, Odense, Denmark
| | - Xudong Zheng
- Department of Mechanical Engineering, Rochester Institute of Technology, Rochester, NY, USA
| | - Qian Xue
- Department of Mechanical Engineering, Rochester Institute of Technology, Rochester, NY, USA
| | - W Tecumseh Fitch
- Department of Behavioral and Cognitive Biology, Faculty of Life Sciences, University of Vienna, Vienna, Austria.
- Vienna Cognitive Science Hub, University of Vienna, Vienna, Austria.
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3
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Longtine C, Eliason CM, Mishkind D, Lee C, Chiappone M, Goller F, Love J, Kingsley EP, Clarke JA, Tabin CJ. Homology and the evolution of vocal folds in the novel avian voice box. Curr Biol 2024; 34:461-472.e7. [PMID: 38183987 DOI: 10.1016/j.cub.2023.12.013] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/14/2023] [Revised: 08/29/2023] [Accepted: 12/06/2023] [Indexed: 01/08/2024]
Abstract
The origin of novel traits, those that are not direct modifications of a pre-existing ancestral structure, remains a fundamental problem in evolutionary biology. For example, little is known about the evolutionary and developmental origins of the novel avian vocal organ, the syrinx. Located at the tracheobronchial junction, the syrinx is responsible for avian vocalization, but it is unclear whether avian vocal folds are homologous to the laryngeal vocal folds in other tetrapods or convergently evolved. Here, we identify a core developmental program involved in avian vocal fold formation and infer the morphology of the syrinx of the ancestor of modern birds. We find that this ancestral syrinx had paired sound sources induced by a conserved developmental pathway and show that shifts in these signals correlate with syringeal diversification. We show that, despite being derived from different developmental tissues, vocal folds in the syrinx and larynx have similar tissue composition and are established through a strikingly similar developmental program, indicating that co-option of an ancestral developmental program facilitated the origin of vocal folds in the avian syrinx.
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Affiliation(s)
- Charlie Longtine
- Department of Genetics, Harvard Medical School, Boston, MA 02115, USA
| | - Chad M Eliason
- The Jackson School of Geosciences and Department of Integrative Biology, The University of Texas at Austin, Austin, TX 78712, USA
| | - Darcy Mishkind
- Department of Genetics, Harvard Medical School, Boston, MA 02115, USA
| | - ChangHee Lee
- Department of Genetics, Harvard Medical School, Boston, MA 02115, USA
| | - Michael Chiappone
- The Jackson School of Geosciences and Department of Integrative Biology, The University of Texas at Austin, Austin, TX 78712, USA
| | - Franz Goller
- School of Biological Sciences, University of Utah, Salt Lake City, UT 84112, USA; Department of Zoophysiology, University of Münster, 48149 Münster, Germany
| | - Jay Love
- School of Biological Sciences, University of Utah, Salt Lake City, UT 84112, USA
| | - Evan P Kingsley
- Department of Genetics, Harvard Medical School, Boston, MA 02115, USA.
| | - Julia A Clarke
- The Jackson School of Geosciences and Department of Integrative Biology, The University of Texas at Austin, Austin, TX 78712, USA.
| | - Clifford J Tabin
- Department of Genetics, Harvard Medical School, Boston, MA 02115, USA.
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4
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Kreiman J. Information conveyed by voice qualitya). THE JOURNAL OF THE ACOUSTICAL SOCIETY OF AMERICA 2024; 155:1264-1271. [PMID: 38345424 DOI: 10.1121/10.0024609] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/21/2023] [Accepted: 01/09/2024] [Indexed: 02/15/2024]
Abstract
The problem of characterizing voice quality has long caused debate and frustration. The richness of the available descriptive vocabulary is overwhelming, but the density and complexity of the information voices convey lead some to conclude that language can never adequately specify what we hear. Others argue that terminology lacks an empirical basis, so that language-based scales are inadequate a priori. Efforts to provide meaningful instrumental characterizations have also had limited success. Such measures may capture sound patterns but cannot at present explain what characteristics, intentions, or identity listeners attribute to the speaker based on those patterns. However, some terms continually reappear across studies. These terms align with acoustic dimensions accounting for variance across speakers and languages and correlate with size and arousal across species. This suggests that labels for quality rest on a bedrock of biology: We have evolved to perceive voices in terms of size/arousal, and these factors structure both voice acoustics and descriptive language. Such linkages could help integrate studies of signals and their meaning, producing a truly interdisciplinary approach to the study of voice.
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Affiliation(s)
- Jody Kreiman
- Departments of Head and Neck Surgery and Linguistics, University of California, Los Angeles, Los Angeles, California 90095-1794, USA
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5
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Ghani B, Denton T, Kahl S, Klinck H. Global birdsong embeddings enable superior transfer learning for bioacoustic classification. Sci Rep 2023; 13:22876. [PMID: 38129622 PMCID: PMC10739890 DOI: 10.1038/s41598-023-49989-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/30/2023] [Accepted: 12/14/2023] [Indexed: 12/23/2023] Open
Abstract
Automated bioacoustic analysis aids understanding and protection of both marine and terrestrial animals and their habitats across extensive spatiotemporal scales, and typically involves analyzing vast collections of acoustic data. With the advent of deep learning models, classification of important signals from these datasets has markedly improved. These models power critical data analyses for research and decision-making in biodiversity monitoring, animal behaviour studies, and natural resource management. However, deep learning models are often data-hungry and require a significant amount of labeled training data to perform well. While sufficient training data is available for certain taxonomic groups (e.g., common bird species), many classes (such as rare and endangered species, many non-bird taxa, and call-type) lack enough data to train a robust model from scratch. This study investigates the utility of feature embeddings extracted from audio classification models to identify bioacoustic classes other than the ones these models were originally trained on. We evaluate models on diverse datasets, including different bird calls and dialect types, bat calls, marine mammals calls, and amphibians calls. The embeddings extracted from the models trained on bird vocalization data consistently allowed higher quality classification than the embeddings trained on general audio datasets. The results of this study indicate that high-quality feature embeddings from large-scale acoustic bird classifiers can be harnessed for few-shot transfer learning, enabling the learning of new classes from a limited quantity of training data. Our findings reveal the potential for efficient analyses of novel bioacoustic tasks, even in scenarios where available training data is limited to a few samples.
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Affiliation(s)
- Burooj Ghani
- Naturalis Biodiversity Center, Leiden, The Netherlands.
| | - Tom Denton
- Google Research, San Francisco, California, USA.
| | - Stefan Kahl
- K. Lisa Yang Center for Conservation Bioacoustics, Cornell Lab of Ornithology, Cornell University, Ithaca, USA
- Chemnitz University of Technology, Chemnitz, Germany
| | - Holger Klinck
- K. Lisa Yang Center for Conservation Bioacoustics, Cornell Lab of Ornithology, Cornell University, Ithaca, USA
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6
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Adam I, Riebel K, Stål P, Wood N, Previs MJ, Elemans CPH. Daily vocal exercise is necessary for peak performance singing in a songbird. Nat Commun 2023; 14:7787. [PMID: 38086817 PMCID: PMC10716414 DOI: 10.1038/s41467-023-43592-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/24/2023] [Accepted: 11/13/2023] [Indexed: 12/18/2023] Open
Abstract
Vocal signals, including human speech and birdsong, are produced by complicated, precisely coordinated body movements, whose execution is fitness-determining in resource competition and mate choice. While the acquisition and maintenance of motor skills generally requires practice to develop and maintain both motor circuitry and muscle performance, it is unknown whether vocal muscles, like limb muscles, exhibit exercise-induced plasticity. Here, we show that juvenile and adult zebra finches (Taeniopygia castanotis) require daily vocal exercise to first gain and subsequently maintain peak vocal muscle performance. Experimentally preventing male birds from singing alters both vocal muscle physiology and vocal performance within days. Furthermore, we find females prefer song of vocally exercised males in choice experiments. Vocal output thus contains information on recent exercise status, and acts as an honest indicator of past exercise investment in songbirds, and possibly in all vocalising vertebrates.
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Affiliation(s)
- Iris Adam
- Department of Biology, University of Southern Denmark, Odense, Denmark.
| | - Katharina Riebel
- Institute of Biology, Animal Sciences & Health, Leiden University, Leiden, The Netherlands
| | - Per Stål
- Department of Integrative Medical Biology, Umea University, Umeå, Sweden
| | - Neil Wood
- Department of Molecular Physiology and Biophysics, Larner College of Medicine, University of Vermont, Burlington, NJ, USA
| | - Michael J Previs
- Department of Molecular Physiology and Biophysics, Larner College of Medicine, University of Vermont, Burlington, NJ, USA
| | - Coen P H Elemans
- Department of Biology, University of Southern Denmark, Odense, Denmark.
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7
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Han SM, Land BR, Bass AH, Rice AN. Sound production biomechanics in three-spined toadfish and potential functional consequences of swim bladder morphology in the Batrachoididaea). THE JOURNAL OF THE ACOUSTICAL SOCIETY OF AMERICA 2023; 154:3466-3478. [PMID: 38019096 DOI: 10.1121/10.0022386] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/29/2023] [Accepted: 10/30/2023] [Indexed: 11/30/2023]
Abstract
The relationship between sound complexity and the underlying morphology and physiology of the vocal organ anatomy is a fundamental component in the evolution of acoustic communication, particularly for fishes. Among vertebrates, the mammalian larynx and avian syrinx are the best-studied vocal organs, and their ability to produce complex vocalizations has been modeled. The range and complexity of the sounds in mammalian lineages have been attributed, in part, to the bilateral nature of the vocal anatomy. Similarly, we hypothesize that the bipartite swim bladder of some species of toadfish (family Batrachoididae) is responsible for complex nonlinear characters of the multiple call types that they can produce, supported by nerve transection experiments. Here, we develop a low-dimensional coupled-oscillator model of the mechanics underlying sound production by the two halves of the swim bladder of the three-spined toadfish, Batrachomoeus trispinosus. Our model was able to replicate the nonlinear structure of both courtship and agonistic sounds. The results provide essential support for the hypothesis that fishes and tetrapods have converged in an evolutionary innovation for complex acoustic signaling, namely, a relatively simple bipartite mechanism dependent on sonic muscles contracting around a gas filled structure.
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Affiliation(s)
- Sang Min Han
- School of Electrical and Computer Engineering, Cornell University, Ithaca, New York 14853, USA
- Department of Neurobiology and Behavior, Cornell University, Ithaca, New York 14853, USA
| | - Bruce R Land
- School of Electrical and Computer Engineering, Cornell University, Ithaca, New York 14853, USA
| | - Andrew H Bass
- Department of Neurobiology and Behavior, Cornell University, Ithaca, New York 14853, USA
| | - Aaron N Rice
- K. Lisa Yang Center for Conservation Bioacoustics, Cornell Lab of Ornithology, Cornell University, Ithaca, New York 14850, USA
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8
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Favaro L, Zanoli A, Ludynia K, Snyman A, Carugati F, Friard O, Scaglione FE, Manassero L, Valazza A, Mathevon N, Gamba M, Reby D. Vocal tract shape variation contributes to individual vocal identity in African penguins. Proc Biol Sci 2023; 290:20231029. [PMID: 37817600 PMCID: PMC10565386 DOI: 10.1098/rspb.2023.1029] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/09/2023] [Accepted: 09/18/2023] [Indexed: 10/12/2023] Open
Abstract
Variation in formant frequencies has been shown to affect social interactions and sexual competition in a range of avian species. Yet, the anatomical bases of this variation are poorly understood. Here, we investigated the morphological correlates of formants production in the vocal apparatus of African penguins. We modelled the geometry of the supra-syringeal vocal tract of 20 specimens to generate a population of virtual vocal tracts with varying dimensions. We then estimated the acoustic response of these virtual vocal tracts and extracted the centre frequency of the first four predicted formants. We demonstrate that: (i) variation in length and cross-sectional area of vocal tracts strongly affects the formant pattern, (ii) the tracheal region determines most of this variation, and (iii) the skeletal size of penguins does not correlate with the trachea length and consequently has relatively little effect on formants. We conclude that in African penguins, while the variation in vocal tract geometry generates variation in resonant frequencies supporting the discrimination of conspecifics, such variation does not provide information on the emitter's body size. Overall, our findings advance our understanding of the role of formant frequencies in bird vocal communication.
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Affiliation(s)
- Livio Favaro
- ENES Bioacoustics Research Laboratory, CRNL, University of Saint-Etienne, CNRS, Inserm, Saint-Etienne, France
- Department of Life Sciences and Systems Biology, University of Turin, Turin, Italy
| | - Anna Zanoli
- Department of Life Sciences and Systems Biology, University of Turin, Turin, Italy
| | - Katrin Ludynia
- Southern African Foundation for the Conservation of Coastal Birds (SANCCOB), Cape Town, South Africa
- Department of Biodiversity and Conservation Biology, University of the Western Cape, Bellville, South Africa
| | - Albert Snyman
- Southern African Foundation for the Conservation of Coastal Birds (SANCCOB), Cape Town, South Africa
| | - Filippo Carugati
- Department of Life Sciences and Systems Biology, University of Turin, Turin, Italy
| | - Olivier Friard
- Department of Life Sciences and Systems Biology, University of Turin, Turin, Italy
| | | | - Luca Manassero
- Department of Veterinary Science, University of Turin, Turin, Italy
| | - Alberto Valazza
- Department of Veterinary Science, University of Turin, Turin, Italy
| | - Nicolas Mathevon
- ENES Bioacoustics Research Laboratory, CRNL, University of Saint-Etienne, CNRS, Inserm, Saint-Etienne, France
- Institut Universitaire de France, Ministry of Higher Education, Research and Innovation, 1 rue Descartes, 75231 Paris Cedex 05, France
| | - Marco Gamba
- Department of Life Sciences and Systems Biology, University of Turin, Turin, Italy
| | - David Reby
- ENES Bioacoustics Research Laboratory, CRNL, University of Saint-Etienne, CNRS, Inserm, Saint-Etienne, France
- Institut Universitaire de France, Ministry of Higher Education, Research and Innovation, 1 rue Descartes, 75231 Paris Cedex 05, France
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9
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Yamoah EN, Pavlinkova G, Fritzsch B. The Development of Speaking and Singing in Infants May Play a Role in Genomics and Dementia in Humans. Brain Sci 2023; 13:1190. [PMID: 37626546 PMCID: PMC10452560 DOI: 10.3390/brainsci13081190] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/24/2023] [Revised: 08/04/2023] [Accepted: 08/08/2023] [Indexed: 08/27/2023] Open
Abstract
The development of the central auditory system, including the auditory cortex and other areas involved in processing sound, is shaped by genetic and environmental factors, enabling infants to learn how to speak. Before explaining hearing in humans, a short overview of auditory dysfunction is provided. Environmental factors such as exposure to sound and language can impact the development and function of the auditory system sound processing, including discerning in speech perception, singing, and language processing. Infants can hear before birth, and sound exposure sculpts their developing auditory system structure and functions. Exposing infants to singing and speaking can support their auditory and language development. In aging humans, the hippocampus and auditory nuclear centers are affected by neurodegenerative diseases such as Alzheimer's, resulting in memory and auditory processing difficulties. As the disease progresses, overt auditory nuclear center damage occurs, leading to problems in processing auditory information. In conclusion, combined memory and auditory processing difficulties significantly impact people's ability to communicate and engage with their societal essence.
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Affiliation(s)
- Ebenezer N. Yamoah
- Department of Physiology and Cell Biology, School of Medicine, University of Nevada, Reno, NV 89557, USA;
| | | | - Bernd Fritzsch
- Department of Neurological Sciences, University of Nebraska Medical Center, Omaha, NE 68198, USA
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10
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Lameira AR, Hardus ME. Wild orangutans can simultaneously use two independent vocal sound sources similarly to songbirds and human beatboxers. PNAS NEXUS 2023; 2:pgad182. [PMID: 37383019 PMCID: PMC10299071 DOI: 10.1093/pnasnexus/pgad182] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 05/04/2023] [Accepted: 05/23/2023] [Indexed: 06/30/2023]
Abstract
Speech is among the most complex motoric tasks humans ever perform. Songbirds match this achievement during song production through the precise and simultaneous motor control of two sound sources in the syrinx. Integrated and intricate motor control has made songbirds comparative models par excellence for the evolution of speech, however, phylogenetic distance with humans prevents an improved understanding of the precursors that, within the human lineage, drove the emergence of advanced vocal motor control and speech. Here, we report two types of biphonic call combination in wild orangutans that articulatorily resemble human beatboxing and that result from the simultaneous exercise of two vocal sound sources: one unvoiced source achieved through articulatory maneuvering of the lips, tongue, and jaw as typically used for consonant-like call production, plus one voiced source achieved through laryngeal action and voice activation as typically used for vowel-like call production. Orangutan biphonic call combinations showcase unappreciated levels of, and distinct neuromotor channels for, vocal motor control in a wild great ape, providing a direct vocal motor analogy with birdsong based on the precise and simultaneous co-control of two sound sources. Findings suggest that speech and human vocal fluency likely built upon complex call combination, coordination and coarticulation capacities that involved vowel-like and consonant-like calls in an ancestral hominid.
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11
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Movahhedi M, Liu XY, Geng B, Elemans C, Xue Q, Wang JX, Zheng X. Predicting 3D soft tissue dynamics from 2D imaging using physics informed neural networks. Commun Biol 2023; 6:541. [PMID: 37208428 DOI: 10.1038/s42003-023-04914-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/02/2022] [Accepted: 05/04/2023] [Indexed: 05/21/2023] Open
Abstract
Tissue dynamics play critical roles in many physiological functions and provide important metrics for clinical diagnosis. Capturing real-time high-resolution 3D images of tissue dynamics, however, remains a challenge. This study presents a hybrid physics-informed neural network algorithm that infers 3D flow-induced tissue dynamics and other physical quantities from sparse 2D images. The algorithm combines a recurrent neural network model of soft tissue with a differentiable fluid solver, leveraging prior knowledge in solid mechanics to project the governing equation on a discrete eigen space. The algorithm uses a Long-short-term memory-based recurrent encoder-decoder connected with a fully connected neural network to capture the temporal dependence of flow-structure-interaction. The effectiveness and merit of the proposed algorithm is demonstrated on synthetic data from a canine vocal fold model and experimental data from excised pigeon syringes. The results showed that the algorithm accurately reconstructs 3D vocal dynamics, aerodynamics, and acoustics from sparse 2D vibration profiles.
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Affiliation(s)
| | - Xin-Yang Liu
- Aerospace and Mechanical Engineering Department, University of Notre Dame, Notre Dame, IN, 46556, USA
| | - Biao Geng
- Mechanical Engineering Department, University of Maine, Orono, ME, 04469, USA
- Mechanical Engineering Department, Rochester Institute of Technology, Rochester, NY, 14623, USA
| | - Coen Elemans
- Department of Biology, University of Southern Denmark, Odense M, 5230, Denmark
| | - Qian Xue
- Mechanical Engineering Department, University of Maine, Orono, ME, 04469, USA
- Mechanical Engineering Department, Rochester Institute of Technology, Rochester, NY, 14623, USA
| | - Jian-Xun Wang
- Aerospace and Mechanical Engineering Department, University of Notre Dame, Notre Dame, IN, 46556, USA.
| | - Xudong Zheng
- Mechanical Engineering Department, University of Maine, Orono, ME, 04469, USA.
- Mechanical Engineering Department, Rochester Institute of Technology, Rochester, NY, 14623, USA.
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12
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Madsen PT, Siebert U, Elemans CPH. Toothed whales use distinct vocal registers for echolocation and communication. Science 2023; 379:928-933. [PMID: 36862790 DOI: 10.1126/science.adc9570] [Citation(s) in RCA: 11] [Impact Index Per Article: 11.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/04/2023]
Abstract
Echolocating toothed whales (odontocetes) capture fast-moving prey in dark marine environments, which critically depends on their ability to generate powerful, ultrasonic clicks. How their supposedly air-driven sound source can produce biosonar clicks at depths of >1000 meters, while also producing rich vocal repertoires to mediate complex social communication, remains unknown. We show that odontocetes possess a sound production system based on air driven through nasal passages that is functionally analogous to laryngeal and syringeal sound production. Tissue vibration in different registers produces distinct echolocation and communication signals across all major odontocete clades, and thus provides a physiological basis for classifying their vocal repertoires. The vocal fry register is used by species from porpoises to sperm whales for generating powerful, highly air-efficient echolocation clicks.
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Affiliation(s)
- Peter T Madsen
- Zoophysiology, Department of Biology, Aarhus University, 8000 Aarhus, Denmark
| | - Ursula Siebert
- Institute for Terrestrial and Aquatic Wildlife Research, University of Veterinary Medicine Hannover, 25761 Büsum, Germany
| | - Coen P H Elemans
- Sound Communication and Behavior Group, Department of Biology, University of Southern Denmark, 5230 Odense M, Denmark
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13
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Ravignani A, Herbst CT. Voices in the ocean. Science 2023; 379:881-882. [PMID: 36862789 DOI: 10.1126/science.adg5256] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/04/2023]
Abstract
Toothed whales evolved a third way of making sounds similar to that of land mammals and birds.
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Affiliation(s)
- Andrea Ravignani
- Comparative Bioacoustics Group, Max Planck Institute for Psycholinguistics, Nijmegen, Netherlands.,Center for Music in the Brain, Department of Clinical Medicine, Aarhus University and The Royal Academy of Music Aarhus/Aalborg, Aarhus, Denmark
| | - Christian T Herbst
- Department of Behavioural and Cognitive Biology, University of Vienna, Vienna, Austria.,Department of Vocal Studies, Mozarteum University Salzburg, Salzburg, Austria.,Janette Ogg Voice Research Center, Shenandoah Conservatory, Winchester, VA, USA
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14
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Adam I, Riebel K, St L P, Wood NB, Previs MJ, Elemans CPH. Peak performance singing requires daily vocal exercise in songbirds. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2023:2023.02.23.529633. [PMID: 36865130 PMCID: PMC9980080 DOI: 10.1101/2023.02.23.529633] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/25/2023]
Abstract
Vocal signals mediate much of human and non-human communication. Key performance traits - such as repertoire size, speed and accuracy of delivery - affect communication efficacy in fitness-decisive contexts such as mate choice and resource competition 1 . Specialized fast vocal muscles 2,3 are central to accurate sound production 4 , but it is unknown whether vocal, like limb muscles 5,6 , need exercise to gain and maintain peak performance 7,8 . Here, we show that for song development in juvenile songbirds, the closest analogue to human speech acquisition 9 , regular vocal muscle exercise is crucial to achieve adult peak muscle performance. Furthermore, adult vocal muscle performance reduces within two days of abolishing exercise, leading to downregulation of critical proteins transforming fast to slower muscle fibre types. Daily vocal exercise is thus required to both gain and maintain peak vocal muscle performance, and if absent changes vocal output. We show that conspecifics can detect these acoustic changes and females prefer the song of exercised males. Song thus contains information on recent exercise status of the sender. Daily investment in vocal exercise to maintain peak performance is an unrecognized cost of singing and could explain why many birds sing daily even under adverse conditions 10 . Because neural regulation of syringeal and laryngeal muscle plasticity is equivalent, vocal output may reflect recent exercise status in all vocalizing vertebrates.
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15
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Herbst CT, Elemans CPH, Tokuda IT, Chatziioannou V, Švec JG. Dynamic System Coupling in Voice Production. J Voice 2023:S0892-1997(22)00310-1. [PMID: 36737267 DOI: 10.1016/j.jvoice.2022.10.004] [Citation(s) in RCA: 5] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/08/2022] [Revised: 10/07/2022] [Accepted: 10/07/2022] [Indexed: 02/04/2023]
Abstract
Voice is a major means of communication for humans, non-human mammals and many other vertebrates like birds and anurans. The physical and physiological principles of voice production are described by two theories: the MyoElastic-AeroDynamic (MEAD) theory and the Source-Filter Theory (SFT). While MEAD employs a multiphysics approach to understand the motor control and dynamics of self-sustained vibration of vocal folds or analogous tissues, SFT predominantly uses acoustics to understand spectral changes of the source via linear propagation through the vocal tract. Because the two theories focus on different aspects of voice production, they are often applied distinctly in specific areas of science and engineering. Here, we argue that the MEAD and the SFT are linked integral aspects of a holistic theory of voice production, describing a dynamically coupled system. The aim of this manuscript is to provide a comprehensive review of both the MEAD and the source-filter theory with its nonlinear extension, the latter of which suggests a number of conceptual similarities to sound production in brass instruments. We discuss the application of both theories to voice production of humans as well as of animals. An appraisal of voice production in the light of non-linear dynamics supports the notion that voice production can best be described with a systems view, considering coupled systems rather than isolated contributions of individual sub-systems.
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Affiliation(s)
- Christian T Herbst
- Department of Vocal Studies, Mozarteum University, Salzburg, Austria; Janette Ogg Voice Research Center, Shenandoah Conservatory, Winchester, Virginia. http://www.christian-herbst.org
| | - Coen P H Elemans
- Vocal Neuromechanics Lab, Department of Biology, University of Southern Denmark, Odense M, Denmark
| | - Isao T Tokuda
- Department of Mechanical Engineering, Ritsumeikan University, Kusatsu, Shiga, Japan
| | | | - Jan G Švec
- Voice Research Laboratory, Department of Experimental Physics, Faculty of Science, Palacky University Olomouc, Olomouc, Czech Republic
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16
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Méndez JM, Dukes J, Cooper BG. Preparing to sing: respiratory patterns underlying motor readiness for song. J Neurophysiol 2022; 128:1646-1662. [PMID: 36416416 PMCID: PMC9762977 DOI: 10.1152/jn.00551.2021] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/29/2021] [Revised: 11/15/2022] [Accepted: 11/18/2022] [Indexed: 11/24/2022] Open
Abstract
Evidence for motor preparation and planning comes from neural activity preceding neural commands to activate the effectors; such preparatory activity is observed in pallial areas controlling learned motor behaviors. Vocal learning in songbirds is an example of a learned, sequential motor behavior that is a respiratory motor act and where there is evidence for neuromuscular planning. Respiration is the foundation of vocalization, elucidating the neural control of song motor planning requires studying respiratory antecedents of song initiation. Despite the importance of respiration in song production, few studies have investigated respiratory antecedents of impending vocalizations. Therefore, we investigated respiratory patterns in male zebra finches (Taeniopygia guttata) and Bengalese finches (Lonchura striata domestica) prior to, during, and following song bouts. In both species, compared with quiet respiration, song respiratory patterns were generated with higher amplitude, faster tempo, and ∼70% of the respiratory cycle is in the expiratory phase. In female-directed and isolation song, both species show a change in the respiratory tempo and the proportion of time spent inhaling prior to song. Following song, only zebra finches show systematic changes in respiratory patterns; they spend a greater proportion of the respiratory cycle in the expiratory phase for 1 s after song, which is likely due to hyperventilation during song. Accelerated respiratory rhythms before song may reflect the motor preparation for the upcoming song production; species differences in preparatory motor activity could be related to the degree to which motor planning is required; finally, song termination may be dictated by respiratory demands.NEW & NOTEWORTHY Motor planning for vocal production in birdsong manifests as an adaptation of respiratory characteristics prior to song. The songbird's respiratory system anticipates the upcoming song production by accelerating the respiratory tempo and increasing the proportion of time spent inhaling.
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Affiliation(s)
- Jorge M Méndez
- Department of Physics and Astronomy, Minnesota State University, Mankato, Minnesota
| | - Jacqueline Dukes
- Department of Psychology, Texas Christian University, Fort Worth, Texas
| | - Brenton G Cooper
- Department of Psychology, Texas Christian University, Fort Worth, Texas
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17
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Håkansson J, Mikkelsen C, Jakobsen L, Elemans CPH. Bats expand their vocal range by recruiting different laryngeal structures for echolocation and social communication. PLoS Biol 2022; 20:e3001881. [PMID: 36445872 PMCID: PMC9707786 DOI: 10.1371/journal.pbio.3001881] [Citation(s) in RCA: 8] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/24/2022] [Accepted: 10/19/2022] [Indexed: 12/03/2022] Open
Abstract
Echolocating bats produce very diverse vocal signals for echolocation and social communication that span an impressive frequency range of 1 to 120 kHz or 7 octaves. This tremendous vocal range is unparalleled in mammalian sound production and thought to be produced by specialized laryngeal vocal membranes on top of vocal folds. However, their function in vocal production remains untested. By filming vocal membranes in excised bat larynges (Myotis daubentonii) in vitro with ultra-high-speed video (up to 250,000 fps) and using deep learning networks to extract their motion, we provide the first direct observations that vocal membranes exhibit flow-induced self-sustained vibrations to produce 10 to 95 kHz echolocation and social communication calls in bats. The vocal membranes achieve the highest fundamental frequencies (fo's) of any mammal, but their vocal range is with 3 to 4 octaves comparable to most mammals. We evaluate the currently outstanding hypotheses for vocal membrane function and propose that most laryngeal adaptations in echolocating bats result from selection for producing high-frequency, rapid echolocation calls to catch fast-moving prey. Furthermore, we show that bats extend their lower vocal range by recruiting their ventricular folds-as in death metal growls-that vibrate at distinctly lower frequencies of 1 to 5 kHz for producing agonistic social calls. The different selection pressures for echolocation and social communication facilitated the evolution of separate laryngeal structures that together vastly expanded the vocal range in bats.
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Affiliation(s)
- Jonas Håkansson
- Sound Communication and Behavior Group, Department of Biology, University of Southern Denmark, Odense M, Denmark,* E-mail: (JH); (CPHE)
| | - Cathrine Mikkelsen
- Sound Communication and Behavior Group, Department of Biology, University of Southern Denmark, Odense M, Denmark
| | - Lasse Jakobsen
- Sound Communication and Behavior Group, Department of Biology, University of Southern Denmark, Odense M, Denmark
| | - Coen P. H. Elemans
- Sound Communication and Behavior Group, Department of Biology, University of Southern Denmark, Odense M, Denmark,* E-mail: (JH); (CPHE)
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18
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Goller F. The syrinx. Curr Biol 2022; 32:R1095-R1100. [DOI: 10.1016/j.cub.2022.08.034] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
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19
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Alviso D, Sciamarella D, Gronskis A, Artana G. Flow-induced self-sustained oscillations in a straight channel with rigid walls and elastic supports. BIOINSPIRATION & BIOMIMETICS 2022; 17:065005. [PMID: 35998610 DOI: 10.1088/1748-3190/ac8c0f] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/16/2022] [Accepted: 08/23/2022] [Indexed: 06/15/2023]
Abstract
This work considers the two-dimensional flow field of an incompressible viscous fluid in a parallel-sided channel. In our study, one of the walls is fixed whereas the other one is elastically mounted, and sustained oscillations are induced by the fluid motion. The flow that forces the wall movement is produced as a consequence that one of the ends of the channel is pressurized, whereas the opposite end is at atmospheric pressure. The study aims at reducing the complexity of models for several physiological systems in which fluid-structure interaction produces large deformation of the wall. We report the experimental results of the observed self-sustained oscillations. These oscillations occur at frequencies close to the natural frequency of the system. The vertical motion is accompanied by a slight trend to rotate the moving mass at intervals when the gap height is quite narrow. We propose a simplified analytical model to explore the conditions under which this motion is possible. The analytical approach considers asymptotic solutions of the Navier-Stokes equation with a perturbation technique. The comparison between the experimental pressure measured at the midlength of the channel and the analytical result issued with a model neglecting viscous effects shows a very good agreement. Also, the rotating trend of the moving wall can be explained in terms of the quadratic dependence of the pressure with the streamwise coordinate that is predicted by this simplified model.
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Affiliation(s)
- Dario Alviso
- Laboratorio de Fluidodinámica, Facultad de Ingeniería, Universidad de Buenos Aires, Av. Paseo Colón 850 CABA, Argentina
- Universidad María Auxiliadora, Ruta Traschaco Km 12.5, Loma Pyta, Paraguay
| | - Denisse Sciamarella
- Institut Franco-Argentin d'Études sur le Climat et ses Impacts, IFAECI IRL 3351 (CNRS-CONICET-UBA-IRD), Buenos Aires, Argentina
| | - Alejandro Gronskis
- Laboratorio de Fluidodinámica, Facultad de Ingeniería, Universidad de Buenos Aires, Av. Paseo Colón 850 CABA, Argentina
| | - Guillermo Artana
- Laboratorio de Fluidodinámica, Facultad de Ingeniería, Universidad de Buenos Aires, Av. Paseo Colón 850 CABA, Argentina
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20
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Faiß M, Riede T, Goller F. Tonality over a broad frequency range is linked to vocal learning in birds. Proc Biol Sci 2022; 289:20220792. [PMID: 36100028 PMCID: PMC9470270 DOI: 10.1098/rspb.2022.0792] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/25/2022] [Accepted: 08/23/2022] [Indexed: 11/12/2022] Open
Abstract
Many birds emit tonal song syllables even though the sound sources generate sound with rich upper harmonic energy content. This tonality is thought to arise in part from dynamically adjusted filtering of harmonic content. Here, we compare tonality of song syllables between vocal learners and non-learners to assess whether this characteristic is linked to the increased neural substrate that evolved with vocal learning. We hypothesize that vocal learning ability is correlated with enhanced ability for generating tonal sounds, because vocal production learners might also have an enhanced ability to articulate their vocal tracts and sound source for producing tonality. To test this hypothesis, we compared vocal learners and non-learners from two groups (186 passerines and 42 hummingbirds) by assessing tonality of song syllables. The data suggest that vocal learners in both clades have evolved to sing songs with higher tonality than the related, non-vocal learning clades, which is consistent with stronger roles for broadband dynamic filtering and adjustments to the sound source. In addition, oscine songs display higher tonality than those of hummingbirds. A complex interplay of vocal tract biomechanics, anatomical differences of the sound source as well as increased motor control through vocal learning facilitates generation of broad tonality.
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Affiliation(s)
- Marius Faiß
- Institute for Zoophysiology, University of Münster, Münster, Germany
| | - Tobias Riede
- Department of Physiology, Midwestern University, Glendale, AZ, USA
| | - Franz Goller
- Institute for Zoophysiology, University of Münster, Münster, Germany
- School of Biological Sciences, University of Utah, Salt Lake City, UT, USA
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21
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Nishimura T, Tokuda IT, Miyachi S, Dunn JC, Herbst CT, Ishimura K, Kaneko A, Kinoshita Y, Koda H, Saers JPP, Imai H, Matsuda T, Larsen ON, Jürgens U, Hirabayashi H, Kojima S, Fitch WT. Evolutionary loss of complexity in human vocal anatomy as an adaptation for speech. Science 2022; 377:760-763. [PMID: 35951711 DOI: 10.1126/science.abm1574] [Citation(s) in RCA: 19] [Impact Index Per Article: 9.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/02/2022]
Abstract
Human speech production obeys the same acoustic principles as vocal production in other animals but has distinctive features: A stable vocal source is filtered by rapidly changing formant frequencies. To understand speech evolution, we examined a wide range of primates, combining observations of phonation with mathematical modeling. We found that source stability relies upon simplifications in laryngeal anatomy, specifically the loss of air sacs and vocal membranes. We conclude that the evolutionary loss of vocal membranes allows human speech to mostly avoid the spontaneous nonlinear phenomena and acoustic chaos common in other primate vocalizations. This loss allows our larynx to produce stable, harmonic-rich phonation, ideally highlighting formant changes that convey most phonetic information. Paradoxically, the increased complexity of human spoken language thus followed simplification of our laryngeal anatomy.
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Affiliation(s)
- Takeshi Nishimura
- Primate Research Institute, Kyoto University, Inuyama, Aichi 484-8506, Japan.,Center for the Evolutionary Origins of Human Behavior, Kyoto University, Inuyama, Aichi 484-8506, Japan
| | - Isao T Tokuda
- Department of Mechanical Engineering, Ritsumeikan University, Kusatsu, Shiga 525-8577, Japan
| | - Shigehiro Miyachi
- Primate Research Institute, Kyoto University, Inuyama, Aichi 484-8506, Japan.,Center for the Evolutionary Origins of Human Behavior, Kyoto University, Inuyama, Aichi 484-8506, Japan
| | - Jacob C Dunn
- Behavioural Ecology Research Group, School of Life Science, Anglia Ruskin University, Cambridge CB1 1PT, UK.,Department of Archaeology, University of Cambridge, Cambridge CB2 3DZ, UK.,Department of Behavioral and Cognitive Biology, University of Vienna, 1030 Vienna, Austria
| | - Christian T Herbst
- Primate Research Institute, Kyoto University, Inuyama, Aichi 484-8506, Japan.,Department of Behavioral and Cognitive Biology, University of Vienna, 1030 Vienna, Austria
| | - Kazuyoshi Ishimura
- Department of Mechanical Engineering, Ritsumeikan University, Kusatsu, Shiga 525-8577, Japan
| | - Akihisa Kaneko
- Primate Research Institute, Kyoto University, Inuyama, Aichi 484-8506, Japan.,Center for the Evolutionary Origins of Human Behavior, Kyoto University, Inuyama, Aichi 484-8506, Japan
| | - Yuki Kinoshita
- Primate Research Institute, Kyoto University, Inuyama, Aichi 484-8506, Japan.,Center for the Evolutionary Origins of Human Behavior, Kyoto University, Inuyama, Aichi 484-8506, Japan
| | - Hiroki Koda
- Primate Research Institute, Kyoto University, Inuyama, Aichi 484-8506, Japan
| | - Jaap P P Saers
- Department of Archaeology, University of Cambridge, Cambridge CB2 3DZ, UK
| | - Hirohiko Imai
- Department of Systems Science, Graduate School of Informatics, Kyoto University, Sakyo, Kyoto 606-8501, Japan
| | - Tetsuya Matsuda
- Department of Systems Science, Graduate School of Informatics, Kyoto University, Sakyo, Kyoto 606-8501, Japan
| | - Ole Næsbye Larsen
- Department of Biology, University of Southern Denmark, DK-5230 Odense M, Denmark
| | - Uwe Jürgens
- Section of Neurobiology, German Primate Center, D-37077 Göttingen, Germany
| | | | - Shozo Kojima
- Primate Research Institute, Kyoto University, Inuyama, Aichi 484-8506, Japan
| | - W Tecumseh Fitch
- Department of Behavioral and Cognitive Biology, University of Vienna, 1030 Vienna, Austria.,Cognitive Science Hub, University of Vienna, Vienna, Austria
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22
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Selection levels on vocal individuality: strategic use or byproduct. Curr Opin Behav Sci 2022. [DOI: 10.1016/j.cobeha.2022.101140] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
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23
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de Reus K, Carlson D, Lowry A, Gross S, Garcia M, Rubio-Garcia A, Salazar-Casals A, Ravignani A. Vocal tract allometry in a mammalian vocal learner. J Exp Biol 2022; 225:275049. [PMID: 35483405 PMCID: PMC9124484 DOI: 10.1242/jeb.243766] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/05/2021] [Accepted: 03/14/2022] [Indexed: 11/20/2022]
Abstract
Acoustic allometry occurs when features of animal vocalisations can be predicted from body size measurements. Despite this being considered the norm, allometry sometimes breaks, resulting in species sounding smaller or larger than expected for their size. A recent hypothesis suggests that allometry-breaking mammals cluster into two groups: those with anatomical adaptations to their vocal tracts and those capable of learning new sounds (vocal learners). Here, we tested which mechanism is used to escape from acoustic allometry by probing vocal tract allometry in a proven mammalian vocal learner, the harbour seal (Phoca vitulina). We tested whether vocal tract structures and body size scale allometrically in 68 young individuals. We found that both body length and body mass accurately predict vocal tract length and one tracheal dimension. Independently, body length predicts vocal fold length while body mass predicts a second tracheal dimension. All vocal tract measures are larger in weaners than in pups and some structures are sexually dimorphic within age classes. We conclude that harbour seals do comply with anatomical allometric constraints. However, allometry between body size and vocal fold length seems to emerge after puppyhood, suggesting that ontogeny may modulate the anatomy–learning distinction previously hypothesised as clear cut. We suggest that seals, and perhaps other species producing signals that deviate from those expected from their vocal tract dimensions, may break allometry without morphological adaptations. In seals, and potentially other vocal learning mammals, advanced neural control over vocal organs may be the main mechanism for breaking acoustic allometry. Summary: Harbour seals are vocal learners that can escape acoustic allometry despite complying with anatomical allometric constraints. Advanced neural control over their vocal organs may allow them to break acoustic allometry.
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Affiliation(s)
- Koen de Reus
- Comparative Bioacoustics Group, Max Planck Institute for Psycholinguistics, 6525 XD Nijmegen, The Netherlands.,Artificial Intelligence Lab, Vrije Universiteit Brussel, 1050 Brussels, Belgium.,Research Department, Sealcentre Pieterburen, 9968 AG Pieterburen, The Netherlands
| | - Daryll Carlson
- Research Department, Sealcentre Pieterburen, 9968 AG Pieterburen, The Netherlands.,Department of Earth System Science, Stanford University, Stanford, CA 94305-4216, USA
| | - Alice Lowry
- Research Department, Sealcentre Pieterburen, 9968 AG Pieterburen, The Netherlands.,School of Environmental Sciences, University of Liverpool, Liverpool, L3 5DA, UK
| | - Stephanie Gross
- Institute for Terrestrial and Aquatic Wildlife Research (ITAW), University of Veterinary Medicine Hannover, Foundation, 25761 Büsum, Germany
| | - Maxime Garcia
- Animal Behaviour, Department of Evolutionary Biology and Environmental Studies, University of Zurich, 8057 Zürich, Switzerland.,Center for the Interdisciplinary Study of Language Evolution, University of Zurich, CH-8050 Zürich, Switzerland
| | - Ana Rubio-Garcia
- Research Department, Sealcentre Pieterburen, 9968 AG Pieterburen, The Netherlands
| | - Anna Salazar-Casals
- Research Department, Sealcentre Pieterburen, 9968 AG Pieterburen, The Netherlands
| | - Andrea Ravignani
- Comparative Bioacoustics Group, Max Planck Institute for Psycholinguistics, 6525 XD Nijmegen, The Netherlands.,Research Department, Sealcentre Pieterburen, 9968 AG Pieterburen, The Netherlands.,Center for Music in the Brain, Department of Clinical Medicine, Aarhus University & The Royal Academy of Music Aarhus/Aalborg, 8000 Aarhus C, Denmark
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24
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Hernández DG, Sober SJ, Nemenman I. Unsupervised Bayesian Ising Approximation for decoding neural activity and other biological dictionaries. eLife 2022; 11:e68192. [PMID: 35315769 PMCID: PMC8989415 DOI: 10.7554/elife.68192] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/09/2021] [Accepted: 03/19/2022] [Indexed: 11/13/2022] Open
Abstract
The problem of deciphering how low-level patterns (action potentials in the brain, amino acids in a protein, etc.) drive high-level biological features (sensorimotor behavior, enzymatic function) represents the central challenge of quantitative biology. The lack of general methods for doing so from the size of datasets that can be collected experimentally severely limits our understanding of the biological world. For example, in neuroscience, some sensory and motor codes have been shown to consist of precisely timed multi-spike patterns. However, the combinatorial complexity of such pattern codes have precluded development of methods for their comprehensive analysis. Thus, just as it is hard to predict a protein's function based on its sequence, we still do not understand how to accurately predict an organism's behavior based on neural activity. Here, we introduce the unsupervised Bayesian Ising Approximation (uBIA) for solving this class of problems. We demonstrate its utility in an application to neural data, detecting precisely timed spike patterns that code for specific motor behaviors in a songbird vocal system. In data recorded during singing from neurons in a vocal control region, our method detects such codewords with an arbitrary number of spikes, does so from small data sets, and accounts for dependencies in occurrences of codewords. Detecting such comprehensive motor control dictionaries can improve our understanding of skilled motor control and the neural bases of sensorimotor learning in animals. To further illustrate the utility of uBIA, we used it to identify the distinct sets of activity patterns that encode vocal motor exploration versus typical song production. Crucially, our method can be used not only for analysis of neural systems, but also for understanding the structure of correlations in other biological and nonbiological datasets.
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Affiliation(s)
- Damián G Hernández
- Department of Medical Physics, Centro Atómico Bariloche and Instituto BalseiroBarilocheArgentina
- Department of Physics, Emory UniversityAtlantaUnited States
| | - Samuel J Sober
- Department of Biology, Emory UniversityAtlantaUnited States
| | - Ilya Nemenman
- Department of Physics, Emory UniversityAtlantaUnited States
- Department of Biology, Emory UniversityAtlantaUnited States
- Initiative in Theory and Modeling of Living SystemsAtlantaUnited States
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25
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26
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Vocal Learning and Behaviors in Birds and Human Bilinguals: Parallels, Divergences and Directions for Research. LANGUAGES 2021. [DOI: 10.3390/languages7010005] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
Comparisons between the communication systems of humans and animals are instrumental in contextualizing speech and language into an evolutionary and biological framework and for illuminating mechanisms of human communication. As a complement to previous work that compares developmental vocal learning and use among humans and songbirds, in this article we highlight phenomena associated with vocal learning subsequent to the development of primary vocalizations (i.e., the primary language (L1) in humans and the primary song (S1) in songbirds). By framing avian “second-song” (S2) learning and use within the human second-language (L2) context, we lay the groundwork for a scientifically-rich dialogue between disciplines. We begin by summarizing basic birdsong research, focusing on how songs are learned and on constraints on learning. We then consider commonalities in vocal learning across humans and birds, in particular the timing and neural mechanisms of learning, variability of input, and variability of outcomes. For S2 and L2 learning outcomes, we address the respective roles of age, entrenchment, and social interactions. We proceed to orient current and future birdsong inquiry around foundational features of human bilingualism: L1 effects on the L2, L1 attrition, and L1<–>L2 switching. Throughout, we highlight characteristics that are shared across species as well as the need for caution in interpreting birdsong research. Thus, from multiple instructive perspectives, our interdisciplinary dialogue sheds light on biological and experiential principles of L2 acquisition that are informed by birdsong research, and leverages well-studied characteristics of bilingualism in order to clarify, contextualize, and further explore S2 learning and use in songbirds.
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27
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Frey R, Wyman MT, Johnston M, Schofield M, Locatelli Y, Reby D. Roars, groans and moans: Anatomical correlates of vocal diversity in polygynous deer. J Anat 2021; 239:1336-1369. [PMID: 34342877 PMCID: PMC8602020 DOI: 10.1111/joa.13519] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/15/2021] [Revised: 06/15/2021] [Accepted: 07/06/2021] [Indexed: 02/01/2023] Open
Abstract
Eurasian deer are characterized by the extraordinary diversity of their vocal repertoires. Male sexual calls range from roars with relatively low fundamental frequency (hereafter fo ) in red deer Cervus elaphus, to moans with extremely high fo in sika deer Cervus nippon, and almost infrasonic groans with exceptionally low fo in fallow deer Dama dama. Moreover, while both red and fallow males are capable of lowering their formant frequencies during their calls, sika males appear to lack this ability. Female contact calls are also characterized by relatively less pronounced, yet strong interspecific differences. The aim of this study is to examine the anatomical bases of these inter-specific and inter-sexual differences by identifying if the acoustic variation is reflected in corresponding anatomical variation. To do this, we investigated the vocal anatomy of male and female specimens of each of these three species. Across species and sexes, we find that the observed acoustic variability is indeed related to expected corresponding anatomical differences, based on the source-filter theory of vocal production. At the source level, low fo is associated with larger vocal folds, whereas high fo is associated with smaller vocal folds: sika deer have the smallest vocal folds and male fallow deer the largest. Red and sika deer vocal folds do not appear to be sexually dimorphic, while fallow deer exhibit strong sexual dimorphism (after correcting for body size differences). At the filter level, the variability in formants is related to the configuration of the vocal tract: in fallow and red deer, both sexes have evolved a permanently descended larynx (with a resting position of the larynx much lower in males than in females). Both sexes also have the potential for momentary, call-synchronous vocal tract elongation, again more pronounced in males than in females. In contrast, the resting position of the larynx is high in both sexes of sika deer and the potential for further active vocal tract elongation is virtually absent in both sexes. Anatomical evidence suggests an evolutionary reversal in larynx position within sika deer, that is, a secondary larynx ascent. Together, our observations confirm that the observed diversity of vocal behaviour in polygynous deer is supported by strong anatomical differences, highlighting the importance of anatomical specializations in shaping mammalian vocal repertoires. Sexual selection is discussed as a potential evolutionary driver of the observed vocal diversity and sexual dimorphisms.
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Affiliation(s)
- Roland Frey
- Department of Reproduction ManagementLeibniz Institute of Zoo and Wildlife Research (IZW)BerlinGermany
| | - Megan Tompkins Wyman
- Department of Evolutionary Biology and Environmental ScienceUniversity of ZurichZurichSwitzerland
| | - Malcolm Johnston
- Clinical Imaging Sciences CentreUniversity of SussexBrightonUK
- Department of RadiologyBrighton and Sussex University HospitalsBrightonUK
| | - Michael Schofield
- Genome Damage and Stability CentreSchool of Life SciencesUniversity of SussexBrightonUK
| | - Yann Locatelli
- Réserve de la Haute ToucheMuséum National d’Histoire NaturelleObterreFrance
| | - David Reby
- Equipe de Neuro‐Ethologie Sensorielle (ENES)/Centre de Recherche en Neurosciences de Lyon (CRNL)University of Saint‐Étienne, CNRS UMR5292, INSERM UMR_S 1028Saint‐ÉtienneFrance
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28
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Abstract
Vocal production learning, the ability to modify the structure of vocalizations as a result of hearing those of others, has been studied extensively in birds but less attention has been given to its occurrence in mammals. We summarize the available evidence for vocal learning in mammals from the last 25 years, updating earlier reviews on the subject. The clearest evidence comes from cetaceans, pinnipeds, elephants and bats where species have been found to copy artificial or human language sounds, or match acoustic models of different sound types. Vocal convergence, in which parameter adjustments within one sound type result in similarities between individuals, occurs in a wider range of mammalian orders with additional evidence from primates, mole-rats, goats and mice. Currently, the underlying mechanisms for convergence are unclear with vocal production learning but also usage learning or matching physiological states being possible explanations. For experimental studies, we highlight the importance of quantitative comparisons of seemingly learned sounds with vocal repertoires before learning started or with species repertoires to confirm novelty. Further studies on the mammalian orders presented here as well as others are needed to explore learning skills and limitations in greater detail. This article is part of the theme issue 'Vocal learning in animals and humans'.
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Affiliation(s)
- Vincent M Janik
- Scottish Oceans Institute, School of Biology, University of St Andrews, St Andrews KY16 8LB, UK
| | - Mirjam Knörnschild
- Museum für Naturkunde, Leibniz-Institute for Evolution and Biodiversity Science, Berlin, Germany.,Animal Behavior Lab, Freie Universität, Berlin, Germany.,Smithsonian Tropical Research Institute, Balboa, Ancón, Panama
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29
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Lin CC, Hedwig B. Wing movements underlying sound production in calling, rivalry, and courtship songs of the cricket Gryllus bimaculatus (DeGeer). JOURNAL OF INSECT PHYSIOLOGY 2021; 134:104299. [PMID: 34418404 DOI: 10.1016/j.jinsphys.2021.104299] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/14/2021] [Revised: 08/12/2021] [Accepted: 08/13/2021] [Indexed: 06/13/2023]
Abstract
We recorded the wing movements and sound signals during the production of calling, rivalry, and courtship song in the bispotted field cricket Gryllus bimaculatus. Recordings confirm that salient sound pulses during calling and rivalry song are generated during the closing movements of the wings. Wing movements for calling and rivalry song start from an elevated wing position and are performed with a very similar opening-closing movement, indicating that both types of songs may be generated by the same neuronal network. Wing movements for courtship song start from a low wing position; rapid closing movements generate high-frequency ticks and low-amplitude wing oscillations lead to low-amplitude pulses, generated during the opening and closing movements with a carrier frequency corresponding to the calling song. The two types of wing movements underlying courtship song indicate a different motor control as compared to calling song and may represent an early evolutionary phenotype.
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Affiliation(s)
- Chu-Cheng Lin
- Department of Zoology, University of Cambridge, Downing Street, Cambridge CB2 3EJ, United Kingdom
| | - Berthold Hedwig
- Department of Zoology, University of Cambridge, Downing Street, Cambridge CB2 3EJ, United Kingdom.
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30
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Arneodo EM, Chen S, Brown DE, Gilja V, Gentner TQ. Neurally driven synthesis of learned, complex vocalizations. Curr Biol 2021; 31:3419-3425.e5. [PMID: 34139192 DOI: 10.1016/j.cub.2021.05.035] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/28/2019] [Revised: 04/03/2021] [Accepted: 05/18/2021] [Indexed: 12/29/2022]
Abstract
Brain machine interfaces (BMIs) hold promise to restore impaired motor function and serve as powerful tools to study learned motor skill. While limb-based motor prosthetic systems have leveraged nonhuman primates as an important animal model,1-4 speech prostheses lack a similar animal model and are more limited in terms of neural interface technology, brain coverage, and behavioral study design.5-7 Songbirds are an attractive model for learned complex vocal behavior. Birdsong shares a number of unique similarities with human speech,8-10 and its study has yielded general insight into multiple mechanisms and circuits behind learning, execution, and maintenance of vocal motor skill.11-18 In addition, the biomechanics of song production bear similarity to those of humans and some nonhuman primates.19-23 Here, we demonstrate a vocal synthesizer for birdsong, realized by mapping neural population activity recorded from electrode arrays implanted in the premotor nucleus HVC onto low-dimensional compressed representations of song, using simple computational methods that are implementable in real time. Using a generative biomechanical model of the vocal organ (syrinx) as the low-dimensional target for these mappings allows for the synthesis of vocalizations that match the bird's own song. These results provide proof of concept that high-dimensional, complex natural behaviors can be directly synthesized from ongoing neural activity. This may inspire similar approaches to prosthetics in other species by exploiting knowledge of the peripheral systems and the temporal structure of their output.
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Affiliation(s)
- Ezequiel M Arneodo
- Biocircuits Institute, University of California, San Diego, 9500 Gilman Drive, La Jolla, CA 92093, USA; Department of Psychology, University of California, San Diego, 9500 Gilman Drive, La Jolla, CA 92093, USA; IFLP-CONICET, Departamento de Física, Universidad Nacional de La Plata, CC 67, La Plata 1900, Argentina
| | - Shukai Chen
- Department of Bioengineering, University of California, San Diego, 9500 Gilman Drive, La Jolla, CA 92093, USA
| | - Daril E Brown
- Department of Electrical and Computer Engineering, University of California, San Diego, 9500 Gilman Drive, La Jolla, CA 92093, USA
| | - Vikash Gilja
- Department of Electrical and Computer Engineering, University of California, San Diego, 9500 Gilman Drive, La Jolla, CA 92093, USA
| | - Timothy Q Gentner
- Biocircuits Institute, University of California, San Diego, 9500 Gilman Drive, La Jolla, CA 92093, USA; Department of Psychology, University of California, San Diego, 9500 Gilman Drive, La Jolla, CA 92093, USA; Kavli Institute for Brain and Mind, 9500 Gilman Drive, La Jolla, CA 92093, USA; Neurobiology Section, University of California, San Diego, 9500 Gilman Drive, La Jolla, CA 92093, USA.
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31
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James LS, Mori C, Wada K, Sakata JT. Phylogeny and mechanisms of shared hierarchical patterns in birdsong. Curr Biol 2021; 31:2796-2808.e9. [PMID: 33989526 DOI: 10.1016/j.cub.2021.04.015] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/21/2020] [Revised: 12/14/2020] [Accepted: 04/08/2021] [Indexed: 11/19/2022]
Abstract
Organizational patterns can be shared across biological systems, and revealing the factors shaping common patterns can provide insight into fundamental biological mechanisms. The behavioral pattern that elements with more constituents tend to consist of shorter constituents (Menzerath's law [ML]) was described first in speech and language (e.g., words with more syllables consist of shorter syllables) and subsequently in music and animal communication. Menzerath's law is hypothesized to reflect efficiency in information transfer, but biases and constraints in motor production can also lead to this pattern. We investigated the evolutionary breadth of ML and the contribution of production mechanisms to ML in the songs of 15 songbird species. Negative relationships between the number and duration of constituents (e.g., syllables in phrases) were observed in all 15 species. However, negative relationships were also observed in null models in which constituents were randomly allocated into observed element durations, and the observed negative relationship for numerous species did not differ from the null model; consequently, ML in these species could simply reflect production constraints and not communicative efficiency. By contrast, ML was significantly different from the null model for more than half the cases, suggesting additional organizational rules are imposed onto birdsongs. Production mechanisms are also underscored by the finding that canaries and zebra finches reared without auditory experiences that guide vocal development produced songs with nearly identical ML patterning as typically reared birds. These analyses highlight the breadth with which production mechanisms contribute to this prevalent organizational pattern in behavior.
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Affiliation(s)
- Logan S James
- Department of Biology, McGill University, Montreal, QC H3A 1B1, Canada.
| | - Chihiro Mori
- Graduate School of Life Science, Hokkaido University, Sapporo 060-0810, Japan
| | - Kazuhiro Wada
- Graduate School of Life Science, Hokkaido University, Sapporo 060-0810, Japan; Faculty of Science, Hokkaido University, Sapporo 060-0810, Japan
| | - Jon T Sakata
- Department of Biology, McGill University, Montreal, QC H3A 1B1, Canada; Centre for Research on Brain, Language, and Music, McGill University, Montreal, QC H3G 2A8, Canada.
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32
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Amador A, Mindlin GB. Synthetic Birdsongs as a Tool to Induce, and Iisten to, Replay Activity in Sleeping Birds. Front Neurosci 2021; 15:647978. [PMID: 34290576 PMCID: PMC8287859 DOI: 10.3389/fnins.2021.647978] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/30/2020] [Accepted: 06/11/2021] [Indexed: 11/13/2022] Open
Abstract
Birdsong is a complex vocal behavior, which emerges out of the interaction between a nervous system and a highly nonlinear vocal device, the syrinx. In this work we discuss how low dimensional dynamical systems, interpretable in terms of the biomechanics involved, are capable of synthesizing realistic songs. We review the experimental and conceptual steps that lead to the formulation of low dimensional dynamical systems for the song system and describe the tests that quantify their success. In particular, we show how to evaluate computational models by comparing the responses of highly selective neurons to the bird's own song and to synthetic copies generated mathematically. Beyond testing the hypothesis behind the model's construction, these low dimensional models allow designing precise stimuli in order to explore the sensorimotor integration of acoustic signals.
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Affiliation(s)
- Ana Amador
- Department of Physics, University of Buenos Aires, Buenos Aires, Argentina
- IFIBA, CONICET, Buenos Aires, Argentina
| | - Gabriel B. Mindlin
- Department of Physics, University of Buenos Aires, Buenos Aires, Argentina
- IFIBA, CONICET, Buenos Aires, Argentina
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33
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Moorman S, Ahn JR, Kao MH. Plasticity of stereotyped birdsong driven by chronic manipulation of cortical-basal ganglia activity. Curr Biol 2021; 31:2619-2632.e4. [PMID: 33974850 PMCID: PMC8222193 DOI: 10.1016/j.cub.2021.04.030] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/13/2020] [Revised: 03/05/2021] [Accepted: 04/13/2021] [Indexed: 10/21/2022]
Abstract
Cortical-basal ganglia (CBG) circuits are critical for motor learning and performance, and are a major site of pathology. In songbirds, a CBG circuit regulates moment-by-moment variability in song and also enables song plasticity. Studies have shown that variable burst firing in LMAN, the output nucleus of this CBG circuit, actively drives acute song variability, but whether and how LMAN drives long-lasting changes in song remains unclear. Here, we ask whether chronic pharmacological augmentation of LMAN bursting is sufficient to drive plasticity in birds singing stereotyped songs. We show that altered LMAN activity drives cumulative changes in acoustic structure, timing, and sequencing over multiple days, and induces repetitions and silent pauses reminiscent of human stuttering. Changes persisted when LMAN was subsequently inactivated, indicating plasticity in song motor regions. Following cessation of pharmacological treatment, acoustic features and song sequence gradually recovered to their baseline values over a period of days to weeks. Together, our findings show that augmented bursting in CBG circuitry drives plasticity in well-learned motor skills, and may inform treatments for basal ganglia movement disorders.
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Affiliation(s)
- Sanne Moorman
- Psychology Department, Utrecht University, Yalelaan 2, 3584 CM Utrecht, the Netherlands; Biology Department, Tufts University, 200 Boston Avenue, Medford, MA 02155, USA.
| | - Jae-Rong Ahn
- Biology Department, Tufts University, 200 Boston Avenue, Medford, MA 02155, USA
| | - Mimi H Kao
- Biology Department, Tufts University, 200 Boston Avenue, Medford, MA 02155, USA; Neuroscience Graduate Program, Tufts University, Boston, MA 02111, USA.
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34
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Adam I, Maxwell A, Rößler H, Hansen EB, Vellema M, Brewer J, Elemans CPH. One-to-one innervation of vocal muscles allows precise control of birdsong. Curr Biol 2021; 31:3115-3124.e5. [PMID: 34089645 DOI: 10.1016/j.cub.2021.05.008] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/18/2019] [Revised: 04/13/2021] [Accepted: 05/04/2021] [Indexed: 11/29/2022]
Abstract
The motor control resolution of any animal behavior is limited to the minimal force step available when activating muscles, which is set by the number and size distribution of motor units (MUs) and muscle-specific force. Birdsong is an excellent model system for understanding acquisition and maintenance of complex fine motor skills, but we know surprisingly little about how the motor pool controlling the syrinx is organized and how MU recruitment drives changes in vocal output. Here we developed an experimental paradigm to measure MU size distribution using spatiotemporal imaging of intracellular calcium concentration in cross-sections of living intact syrinx muscles. We combined these measurements with muscle stress and an in vitro syrinx preparation to determine the control resolution of fundamental frequency (fo), a key vocal parameter, in zebra finches. We show that syringeal muscles have extremely small MUs, with 40%-50% innervating ≤3 and 13%-17% innervating a single muscle fiber. Combined with the lowest specific stress (5 mN/mm2) known to skeletal vertebrate muscle, small force steps by the major fo controlling muscle provide control of 50-mHz to 7.3-Hz steps per MU. We show that the song system has the highest motor control resolution possible in the vertebrate nervous system and suggest this evolved due to strong selection on fine gradation of vocal output. Furthermore, we propose that high-resolution motor control was a key feature contributing to the radiation of songbirds that allowed diversification of song and speciation by vocal space expansion.
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Affiliation(s)
- Iris Adam
- Department of Biology, University of Southern Denmark, Campusvej 55, 5230 Odense, Denmark
| | - Alyssa Maxwell
- Department of Biology, University of Southern Denmark, Campusvej 55, 5230 Odense, Denmark
| | - Helen Rößler
- Department of Biology, University of Southern Denmark, Campusvej 55, 5230 Odense, Denmark
| | - Emil B Hansen
- Department of Biology, University of Southern Denmark, Campusvej 55, 5230 Odense, Denmark
| | - Michiel Vellema
- Department of Biology, University of Southern Denmark, Campusvej 55, 5230 Odense, Denmark
| | - Jonathan Brewer
- PhyLife, University of Southern Denmark, Campusvej 55, 5230 Odense, Denmark
| | - Coen P H Elemans
- Department of Biology, University of Southern Denmark, Campusvej 55, 5230 Odense, Denmark.
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35
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Lewis RN, Soma M, de Kort SR, Gilman RT. Like Father Like Son: Cultural and Genetic Contributions to Song Inheritance in an Estrildid Finch. Front Psychol 2021; 12:654198. [PMID: 34149539 PMCID: PMC8213215 DOI: 10.3389/fpsyg.2021.654198] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/15/2021] [Accepted: 05/05/2021] [Indexed: 11/25/2022] Open
Abstract
Social learning of vocalizations is integral to song inheritance in oscine passerines. However, other factors, such as genetic inheritance and the developmental environment, can also influence song phenotype. The relative contributions of these factors can have a strong influence on song evolution and may affect important evolutionary processes such as speciation. However, relative contributions are well-described only for a few species and are likely to vary with taxonomy. Using archived song data, we examined patterns of song inheritance in a domestic population of Java sparrows (Lonchura oryzivora), some of which had been cross-fostered. Six-hundred and seventy-six songs from 73 birds were segmented and classified into notes and note subtypes (N = 22,972), for which a range of acoustic features were measured. Overall, we found strong evidence for cultural inheritance of song structure and of the acoustic characteristics of notes; sons’ song syntax and note composition were similar to that of their social fathers and were not influenced by genetic relatedness. For vocal consistency of note subtypes, a measure of vocal performance, there was no apparent evidence of social or genetic inheritance, but both age and developmental environment influenced consistency. These findings suggest that high learning fidelity of song material, i.e., song structure and note characteristics, could allow novel variants to be preserved and accumulate over generations, with implications for evolution and conservation. However, differences in vocal performance do not show strong links to cultural inheritance, instead potentially serving as condition dependent signals.
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Affiliation(s)
- Rebecca N Lewis
- Department of Earth and Environmental Sciences, University of Manchester, Manchester, United Kingdom.,Chester Zoo, Chester, United Kingdom
| | - Masayo Soma
- Department of Biology, Faculty of Science, Hokkaido University, Hokkaido, Japan
| | - Selvino R de Kort
- Department of Natural Sciences, Ecology and Environment Research Centre, Manchester Metropolitan University, Manchester, United Kingdom
| | - R Tucker Gilman
- Department of Earth and Environmental Sciences, University of Manchester, Manchester, United Kingdom
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36
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Pagliarini S, Leblois A, Hinaut X. Vocal Imitation in Sensorimotor Learning Models: A Comparative Review. IEEE Trans Cogn Dev Syst 2021. [DOI: 10.1109/tcds.2020.3041179] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
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37
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Jakobsen L, Christensen-Dalsgaard J, Juhl PM, Elemans CPH. How Loud Can you go? Physical and Physiological Constraints to Producing High Sound Pressures in Animal Vocalizations. Front Ecol Evol 2021. [DOI: 10.3389/fevo.2021.657254] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/28/2023] Open
Abstract
Sound is vital for communication and navigation across the animal kingdom and sound communication is unrivaled in accuracy and information richness over long distances both in air and water. The source level (SL) of the sound is a key factor in determining the range at which animals can communicate and the range at which echolocators can operate their biosonar. Here we compile, standardize and compare measurements of the loudest animals both in air and water. In air we find a remarkable similarity in the highest SLs produced across the different taxa. Within all taxa we find species that produce sound above 100 dBpeak re 20 μPa at 1 m, and a few bird and mammal species have SLs as high as 125 dBpeak re 20 μPa at 1 m. We next used pulsating sphere and piston models to estimate the maximum sound pressures generated in the radiated sound field. These data suggest that the loudest species within all taxa converge upon maximum pressures of 140–150 dBpeak re 20 μPa in air. In water, the toothed whales produce by far the loudest SLs up to 240 dBpeak re 1 μPa at 1 m. We discuss possible physical limitations to the production, radiation and propagation of high sound pressures. Furthermore, we discuss physiological limitations to the wide variety of sound generating mechanisms that have evolved in air and water of which many are still not well-understood or even unknown. We propose that in air, non-linear sound propagation forms a limit to producing louder sounds. While non-linear sound propagation may play a role in water as well, both sperm whale and pistol shrimp reach another physical limit of sound production, the cavitation limit in water. Taken together, our data suggests that both in air and water, animals evolved that produce sound so loud that they are pushing against physical rather than physiological limits of sound production, radiation and propagation.
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38
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Lesch R, Schwaha T, Orozco A, Shilling M, Brunelli S, Hofer M, Bowling DL, Zimmerberg B, Fitch WT. Selection on vocal output affects laryngeal morphology in rats. J Anat 2021; 238:1179-1190. [PMID: 33480050 PMCID: PMC8053590 DOI: 10.1111/joa.13366] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/20/2020] [Revised: 10/27/2020] [Accepted: 11/06/2020] [Indexed: 12/03/2022] Open
Abstract
Although laryngeal morphology often reflects adaptations for vocalization, the structural consequences of selection for particular aspects of vocal behavior remain poorly understood. In this study, we investigated the effects of increased ultrasonic calling in pups on the adult larynx morphology in selectively bred rat lines. Laryngeal morphology was assessed using multiple techniques: mineralized cartilage volumes were compared in 3D-models derived from microCT scans, internal structure was compared using clearing and staining procedures combined with microscopy, cellular structure was compared using histology and microscopy, and element composition was assessed with scanning energy dispersive X-ray spectroscopy. Our results show that adult rats from lines bred to produce ultrasonic calls at higher rates as pups have shorter vocal folds and a more mineralized thyroid cartilage compared to rats bred to produce ultrasonic calls at lower rates. The change in vocal fold length appears to account for differences in low-frequency calls in these two rat lines. We suggest that the observed increases in mineralization of the thyroid cartilage in the high-ultrasound lineage provide increased reinforcement of the laryngeal structure during ultrasonic call production. Our findings therefore demonstrate an effect of selection for vocal behavior on laryngeal morphology, with acoustic consequences.
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Affiliation(s)
- Raffaela Lesch
- Department of Behavioral and Cognitive BiologyUniversity of ViennaViennaAustria
| | - Thomas Schwaha
- Department of Evolutionary Biology, Integrative ZoologyUniversity of ViennaViennaAustria
| | - Andrea Orozco
- Department of PsychologyWilliams CollegeWilliamstownMAUSA
| | | | - Susan Brunelli
- Department of PsychiatryColumbia UniversityNew YorkNYUSA
| | - Myron Hofer
- Department of PsychiatryColumbia UniversityNew YorkNYUSA
| | - Daniel L. Bowling
- Department of Behavioral and Cognitive BiologyUniversity of ViennaViennaAustria
- Department of Psychiatry and Behavioral SciencesStanford University School of MedicineStanfordCAUSA
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39
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Syringeal vocal folds do not have a voice in zebra finch vocal development. Sci Rep 2021; 11:6469. [PMID: 33742101 PMCID: PMC7979720 DOI: 10.1038/s41598-021-85929-5] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/08/2020] [Accepted: 03/03/2021] [Indexed: 01/31/2023] Open
Abstract
Vocal behavior can be dramatically changed by both neural circuit development and postnatal maturation of the body. During song learning in songbirds, both the song system and syringeal muscles are functionally changing, but it is unknown if maturation of sound generators within the syrinx contributes to vocal development. Here we densely sample the respiratory pressure control space of the zebra finch syrinx in vitro. We show that the syrinx produces sound very efficiently and that key acoustic parameters, minimal fundamental frequency, entropy and source level, do not change over development in both sexes. Thus, our data suggest that the observed acoustic changes in vocal development must be attributed to changes in the motor control pathway, from song system circuitry to muscle force, and not by material property changes in the avian analog of the vocal folds. We propose that in songbirds, muscle use and training driven by the sexually dimorphic song system are the crucial drivers that lead to sexual dimorphism of the syringeal skeleton and musculature. The size and properties of the instrument are thus not changing, while its player is.
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40
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Švec JG, Schutte HK, Chen CJ, Titze IR. Integrative Insights into the Myoelastic-Aerodynamic Theory and Acoustics of Phonation. Scientific Tribute to Donald G. Miller. J Voice 2021; 37:305-313. [PMID: 33744068 DOI: 10.1016/j.jvoice.2021.01.023] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/27/2020] [Revised: 01/22/2021] [Accepted: 01/26/2021] [Indexed: 10/21/2022]
Abstract
In this tribute article to D.G. Miller, we review some historical and recent contributions to understanding the myoelastic-aerodynamic (MEAD) theory of phonation and the related acoustic phenomena in subglottal and vocal tract. At the time of the formulation of MEAD by van den Berg in late 1950s, it was assumed that vocal fold oscillations are self-sustained thanks to increased subglottal pressure pushing the glottis to open and decreased subglottal pressure allowing the glottis to close. In vivo measurements of subglottal pressures during phonation invalidated these assumptions, however, and showed that at low fundamental frequencies subglottal pressure rather tends to reach a maximum value at the beginning of glottal closure and then exhibits damped oscillations. These events can be interpreted as transient acoustic resonance phenomena in the subglottal tract that are triggered by glottal closure. They are analogous to the transient acoustic phenomena seen in the vocal tract. Rather than subglottal pressure oscillations, a more efficient mechanism of transfer of aerodynamic energy to the vocal fold vibrations has been identified in the vertical phase differences (mucosal waves) making the glottal shape more convergent during glottis opening than during glottis closing. Along with other discoveries, these findings form the basis of our current understanding of MEAD.
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Affiliation(s)
- Jan G Švec
- Voice Research Laboratory, Department of Experimental Physics, Faculty of Sciences, Palacký University, Olomouc, Czechia.
| | - Harm K Schutte
- Groningen Voice Research Lab, Groningen, the Netherlands
| | - C Julian Chen
- Department of Applied Physics and Applied Mathematics, Columbia University, New York, New York
| | - Ingo R Titze
- National Center for Voice and Speech, University of Utah, Salt Lake City, Utah
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41
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Mann DC, Fitch WT, Tu HW, Hoeschele M. Universal principles underlying segmental structures in parrot song and human speech. Sci Rep 2021; 11:776. [PMID: 33436874 PMCID: PMC7804275 DOI: 10.1038/s41598-020-80340-y] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/09/2020] [Accepted: 12/04/2020] [Indexed: 01/29/2023] Open
Abstract
Despite the diversity of human languages, certain linguistic patterns are remarkably consistent across human populations. While syntactic universals receive more attention, there is stronger evidence for universal patterns in the inventory and organization of segments: units that are separated by rapid acoustic transitions which are used to build syllables, words, and phrases. Crucially, if an alien researcher investigated spoken human language how we analyze non-human communication systems, many of the phonological regularities would be overlooked, as the majority of analyses in non-humans treat breath groups, or "syllables" (units divided by silent inhalations), as the smallest unit. Here, we introduce a novel segment-based analysis that reveals patterns in the acoustic output of budgerigars, a vocal learning parrot species, that match universal phonological patterns well-documented in humans. We show that song in four independent budgerigar populations is comprised of consonant- and vowel-like segments. Furthermore, the organization of segments within syllables is not random. As in spoken human language, segments at the start of a vocalization are more likely to be consonant-like and segments at the end are more likely to be longer, quieter, and lower in fundamental frequency. These results provide a new foundation for empirical investigation of language-like abilities in other species.
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Affiliation(s)
- Dan C Mann
- Linguistics Program, The Graduate Center of the City University of New York, New York City, USA.
- Department of Cognitive Biology, University of Vienna, Vienna, Austria.
| | - W Tecumseh Fitch
- Department of Cognitive Biology, University of Vienna, Vienna, Austria
| | - Hsiao-Wei Tu
- Department of Psychology, University of Maryland, College Park, USA
| | - Marisa Hoeschele
- Department of Cognitive Biology, University of Vienna, Vienna, Austria
- Acoustics Research Institute, Austrian Academy of Sciences, Vienna, Austria
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42
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Herbst CT, Nishimura T, Garcia M, Migimatsu K, Tokuda IT. Effect of Ventricular Folds on Vocalization Fundamental Frequency in Domestic Pigs (Sus scrofa domesticus). J Voice 2020; 35:805.e1-805.e15. [PMID: 33388229 DOI: 10.1016/j.jvoice.2020.01.013] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/04/2019] [Revised: 01/10/2020] [Accepted: 01/16/2020] [Indexed: 10/22/2022]
Abstract
This study investigates the effect of the ventricular folds on fundamental frequency (fo) in the voice production of domestic pigs (Sus scrofa domesticus). The excised larynges of six subadult pigs were phonated in two preparation stages, with the ventricular folds present (PS1) and removed (PS2). Vocal fold resonances were tested with a laser vibrometer, and a four-mass computational model was created. Highly significant fo differences were found between PS1 and PS2 (means at 93.7 and 409.3 Hz, respectively). Two tissue resonances were found at 115 Hz and 250-290 Hz. The computational model had unique solutions for abducted and adducted ventricular folds at about 150 and 400 Hz, roughly matching the fo measured ex vivo for PS1 and PS2. The differing fo encountered across preparation stages PS1 and PS2 is explained by distinct activation of either a high or a low eigenfrequency mode, depending on the engagement of the ventricular folds. The inability of the investigated larynges to vibrate at frequencies below 250 Hz in PS2 suggests that in vivo low-frequency calls of domestic pigs (pre-eminently grunts) are likely produced with engaged ventricular folds. Allometric comparison suggests that the special, mechanically coupled "double oscillator" has evolved to prevent signaling disadvantages. Given these traits, the porcine larynx might - apart from special applications relating to the involvement of ventricular folds - not be an ideal candidate for emulating human voice production in excised larynx experimentation.
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Affiliation(s)
- Christian T Herbst
- Antonio Salieri Department of Vocal Studies and Vocal Research in Music Education, University of Music and Performing Arts Vienna, Vienna, Austria.
| | | | - Maxime Garcia
- ENES Lab, Université Lyon/Saint-Etienne, Neuro-PSI, CNRS UMR 9197, Saint-Etienne, France; Department of Evolutionary Biology and Environmental Studies, University of Zurich, Zürich, Switzerland
| | - Kishin Migimatsu
- Department of Mechanical Engineering, Ritsumeikan University, Kusatsu, Shiga, Japan
| | - Isao T Tokuda
- Department of Mechanical Engineering, Ritsumeikan University, Kusatsu, Shiga, Japan
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43
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Nowak LJ. Observations on mechanisms and phenomena underlying underwater and surface vocalisations of grey seals. BIOACOUSTICS 2020. [DOI: 10.1080/09524622.2020.1851298] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
Affiliation(s)
- Lukasz J. Nowak
- Biomedical Photonic Imaging Group, University of Twente, Enschede, The Netherlands
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44
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Adam I, Elemans CPH. Increasing Muscle Speed Drives Changes in the Neuromuscular Transform of Motor Commands during Postnatal Development in Songbirds. J Neurosci 2020; 40:6722-6731. [PMID: 32487696 PMCID: PMC7455216 DOI: 10.1523/jneurosci.0111-20.2020] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/15/2020] [Revised: 05/19/2020] [Accepted: 05/21/2020] [Indexed: 01/04/2023] Open
Abstract
Progressive changes in vocal behavior over the course of vocal imitation leaning are often attributed exclusively to developing neural circuits, but the effects of postnatal body changes remain unknown. In songbirds, the syrinx transforms song system motor commands into sound and exhibits changes during song learning. Here we test the hypothesis that the transformation from motor commands to force trajectories by syringeal muscles functionally changes over vocal development in zebra finches. Our data collected in both sexes show that, only in males, muscle speed significantly increases and that supralinear summation occurs and increases with muscle contraction speed. Furthermore, we show that previously reported submillisecond spike timing in the avian cortex can be resolved by superfast syringeal muscles and that the sensitivity to spike timing increases with speed. Because motor neuron and muscle properties are tightly linked, we make predictions on the boundaries of the yet unknown motor code that correspond well with cortical activity. Together, we show that syringeal muscles undergo essential transformations during song learning that drastically change how neural commands are translated into force profiles and thereby acoustic features. We propose that the song system motor code must compensate for these changes to achieve its acoustic targets. Our data thus support the hypothesis that the neuromuscular transformation changes over vocal development and emphasizes the need for an embodied view of song motor learning.SIGNIFICANCE STATEMENT Fine motor skill learning typically occurs in a postnatal period when the brain is learning to control a body that is changing dramatically due to growth and development. How the developing body influences motor code formation and vice versa remains largely unknown. Here we show that vocal muscles in songbirds undergo critical transformations during song learning that drastically change how neural commands are translated into force profiles and thereby acoustic features. We propose that the motor code must compensate for these changes to achieve its acoustic targets. Our data thus support the hypothesis that the neuromuscular transformation changes over vocal development and emphasizes the need for an embodied view of song motor learning.
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Affiliation(s)
- Iris Adam
- University of Southern Denmark, Department of Biology, 5230 Odense M, Denmark
| | - Coen P H Elemans
- University of Southern Denmark, Department of Biology, 5230 Odense M, Denmark
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Bowling DL, Dunn JC, Smaers JB, Garcia M, Sato A, Hantke G, Handschuh S, Dengg S, Kerney M, Kitchener AC, Gumpenberger M, Fitch WT. Rapid evolution of the primate larynx? PLoS Biol 2020; 18:e3000764. [PMID: 32780733 PMCID: PMC7418954 DOI: 10.1371/journal.pbio.3000764] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/14/2020] [Accepted: 07/08/2020] [Indexed: 12/03/2022] Open
Abstract
Tissue vibrations in the larynx produce most sounds that comprise vocal communication in mammals. Larynx morphology is thus predicted to be a key target for selection, particularly in species with highly developed vocal communication systems. Here, we present a novel database of digitally modeled scanned larynges from 55 different mammalian species, representing a wide range of body sizes in the primate and carnivoran orders. Using phylogenetic comparative methods, we demonstrate that the primate larynx has evolved more rapidly than the carnivoran larynx, resulting in a pattern of larger size and increased deviation from expected allometry with body size. These results imply fundamental differences between primates and carnivorans in the balance of selective forces that constrain larynx size and highlight an evolutionary flexibility in primates that may help explain why we have developed complex and diverse uses of the vocal organ for communication.
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Affiliation(s)
- Daniel L. Bowling
- Department of Psychiatry and Behavioral Sciences, Stanford University, Stanford, California, United States of America
- Department of Behavioral & Cognitive Biology, University of Vienna, Vienna, Austria
| | - Jacob C. Dunn
- Department of Behavioral & Cognitive Biology, University of Vienna, Vienna, Austria
- Behavioural Ecology Research Group, Anglia Ruskin University, Cambridge, United Kingdom
- Biological Anthropology, Department of Archaeology, University of Cambridge, Cambridge, United Kingdom
| | - Jeroen B. Smaers
- Department of Anthropology, Stony Brook University, Stony Brook, New York, United States of America
- Division of Anthropology, American Museum of Natural History, New York City, New York, United States of America
| | - Maxime Garcia
- Department of Behavioral & Cognitive Biology, University of Vienna, Vienna, Austria
- Animal Behaviour, Department of Evolutionary Biology and Environmental Science, University of Zurich, Zurich, Switzerland
| | - Asha Sato
- Center for Language Evolution, University of Edinburgh, Edinburgh, United Kingdom
| | - Georg Hantke
- Department of Natural Sciences, National Museums Scotland, Edinburgh, United Kingdom
| | - Stephan Handschuh
- VetCore Facility for Research, University of Veterinary Medicine Vienna, Vienna, Austria
| | - Sabine Dengg
- Klinische Abteilung für Bildgebende Diagnostik, University of Veterinary Medicine Vienna, Vienna, Austria
| | - Max Kerney
- Behavioural Ecology Research Group, Anglia Ruskin University, Cambridge, United Kingdom
| | - Andrew C. Kitchener
- Department of Natural Sciences, National Museums Scotland, Edinburgh, United Kingdom
| | - Michaela Gumpenberger
- Klinische Abteilung für Bildgebende Diagnostik, University of Veterinary Medicine Vienna, Vienna, Austria
| | - W. Tecumseh Fitch
- Department of Behavioral & Cognitive Biology, University of Vienna, Vienna, Austria
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Monte A, Cerwenka AF, Ruthensteiner B, Gahr M, Düring DN. The hummingbird syrinx morphome: a detailed three-dimensional description of the black jacobin’s vocal organ. BMC ZOOL 2020. [DOI: 10.1186/s40850-020-00057-3] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023] Open
Abstract
Abstract
Background
The ability to imitate sounds depends on a process called vocal production learning, a rare evolutionary trait. In addition to the few mammalian groups that possess this ability, vocal production learning has evolved independently in three avian clades: songbirds, parrots, and hummingbirds. Although the anatomy and mechanisms of sound production in songbirds are well understood, little is known about the hummingbird’s vocal anatomy.
Results
We use high-resolution micro-computed tomography (μCT) and microdissection to reveal the three-dimensional structure of the syrinx, the vocal organ of the black jacobin (Florisuga fusca), a phylogenetically basal hummingbird species. We identify three features of the black jacobin’s syrinx: (i) a shift in the position of the syrinx to the outside of the thoracic cavity and the related loss of the sterno-tracheal muscle, (ii) complex intrinsic musculature, oriented dorso-ventrally, and (iii) ossicles embedded in the medial vibratory membranes.
Conclusions
The extra-thoracic placement of the black jacobin’s syrinx and the dorso-ventrally oriented musculature likely aid to uncoupling syrinx movements from extensive flight-related thorax constraints. The syrinx morphology further allows for vibratory decoupling, precise control of complex acoustic parameters, and a large motor redundancy that may be key biomechanical factors leading to acoustic complexity and thus facilitating the occurrence of vocal production learning.
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Decker E, Parker B, Linke S, Capon S, Sheldon F. Singing streams: Describing freshwater soundscapes with the help of acoustic indices. Ecol Evol 2020; 10:4979-4989. [PMID: 32551075 PMCID: PMC7297790 DOI: 10.1002/ece3.6251] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/27/2020] [Revised: 03/10/2020] [Accepted: 03/10/2020] [Indexed: 11/19/2022] Open
Abstract
Understanding soundscapes, that is, the totality of sounds within a location, helps to assess nature in a more holistic way, providing a novel approach to investigating ecosystems. To date, very few studies have investigated freshwater soundscapes in their entirety and none across a broad spatial scale.In this study, we recorded 12 freshwater streams in South East Queensland continuously for three days and calculated three acoustic indices for each minute in each stream. We then used principal component analysis of summary statistics for all three acoustic indices to investigate acoustic properties of each stream and spatial variation in their soundscapes.All streams had a unique soundscape with most exhibiting diurnal variation in acoustic patterns. Across these sites, we identified five distinct groups with similar acoustic characteristics. We found that we could use summary statistics of AIs to describe daytimes across streams as well. Most difference in stream soundscapes was observed during the daytime with significant variation in soundscapes both between hours and among sites. Synthesis and Application. We demonstrate how to characterize stream soundscapes by using simple summary statistics of complex acoustic indices. This technique allows simple and rapid investigation of streams with similar acoustic properties and the capacity to characterize them in a holistic and universal way. While we developed this technique for freshwater streams, it is also applicable to terrestrial and marine soundscapes.
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Affiliation(s)
- Emilia Decker
- Australian Rivers InstituteGriffith UniversityNathanQueenslandAustralia
| | - Brett Parker
- Australian Rivers InstituteGriffith UniversityNathanQueenslandAustralia
| | - Simon Linke
- Australian Rivers InstituteGriffith UniversityNathanQueenslandAustralia
| | - Samantha Capon
- Australian Rivers InstituteGriffith UniversityNathanQueenslandAustralia
| | - Fran Sheldon
- Australian Rivers InstituteGriffith UniversityNathanQueenslandAustralia
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High-fidelity continuum modeling predicts avian voiced sound production. Proc Natl Acad Sci U S A 2020; 117:4718-4723. [PMID: 32054784 DOI: 10.1073/pnas.1922147117] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
Abstract
Voiced sound production is the primary form of acoustic communication in terrestrial vertebrates, particularly birds and mammals, including humans. Developing a causal physics-based model that ultimately links descending vocal motor control to tissue vibration and sound requires embodied approaches that include realistic representations of voice physiology. Here, we first implement and then experimentally test a high-fidelity three-dimensional (3D) continuum model for voiced sound production in birds. Driven by individual-based physiologically quantifiable inputs, combined with noninvasive inverse methods for tissue material parameterization, our model accurately predicts observed key vibratory and acoustic performance traits. These results demonstrate that realistic models lead to accurate predictions and support the continuum model approach as a critical tool toward a causal model of voiced sound production.
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Abstract
This review provides a comprehensive compilation, from a digital image processing point of view of the most important techniques currently developed to characterize and quantify the vibration behaviour of the vocal folds, along with a detailed description of the laryngeal image modalities currently used in the clinic. The review presents an overview of the most significant glottal-gap segmentation and facilitative playbacks techniques used in the literature for the mentioned purpose, and shows the drawbacks and challenges that still remain unsolved to develop robust vocal folds vibration function analysis tools based on digital image processing.
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50
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Zhang YS, Ghazanfar AA. A Hierarchy of Autonomous Systems for Vocal Production. Trends Neurosci 2020; 43:115-126. [PMID: 31955902 PMCID: PMC7213988 DOI: 10.1016/j.tins.2019.12.006] [Citation(s) in RCA: 35] [Impact Index Per Article: 8.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/09/2019] [Revised: 12/01/2019] [Accepted: 12/12/2019] [Indexed: 10/25/2022]
Abstract
Vocal production is hierarchical in the time domain. These hierarchies build upon biomechanical and neural dynamics across various timescales. We review studies in marmoset monkeys, songbirds, and other vertebrates. To organize these data in an accessible and across-species framework, we interpret the different timescales of vocal production as belonging to different levels of an autonomous systems hierarchy. The first level accounts for vocal acoustics produced on short timescales; subsequent levels account for longer timescales of vocal output. The hierarchy of autonomous systems that we put forth accounts for vocal patterning, sequence generation, dyadic interactions, and context dependence by sequentially incorporating central pattern generators, intrinsic drives, and sensory signals from the environment. We then show the framework's utility by providing an integrative explanation of infant vocal production learning in which social feedback modulates infant vocal acoustics through the tuning of a drive signal.
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Affiliation(s)
- Yisi S Zhang
- Princeton Neuroscience Institute, Princeton University, Princeton, NJ 08544, USA.
| | - Asif A Ghazanfar
- Princeton Neuroscience Institute, Princeton University, Princeton, NJ 08544, USA; Department of Psychology, Princeton University, Princeton, NJ 08544, USA; Department of Ecology & Evolutionary Biology, Princeton University, Princeton, NJ 08544, USA.
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