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For: Ayroles JF, Carbone MA, Stone EA, Jordan KW, Lyman RF, Magwire MM, Rollmann SM, Duncan LH, Lawrence F, Anholt RRH, Mackay TFC. Systems genetics of complex traits in Drosophila melanogaster. Nat Genet 2009;41:299-307. [PMID: 19234471 PMCID: PMC2752214 DOI: 10.1038/ng.332] [Citation(s) in RCA: 393] [Impact Index Per Article: 26.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/27/2008] [Accepted: 01/12/2009] [Indexed: 01/18/2023]
Number Cited by Other Article(s)
1
Ren S, Li J, Dorado J, Sierra A, González-Díaz H, Duardo A, Shen B. From molecular mechanisms of prostate cancer to translational applications: based on multi-omics fusion analysis and intelligent medicine. Health Inf Sci Syst 2024;12:6. [PMID: 38125666 PMCID: PMC10728428 DOI: 10.1007/s13755-023-00264-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/24/2023] [Accepted: 11/28/2023] [Indexed: 12/23/2023]  Open
2
Li T, Zhang RS, True JR. Genetic variation for sexual dimorphism in developmental traits in Drosophila melanogaster. G3 (BETHESDA, MD.) 2024;14:jkae010. [PMID: 38427952 PMCID: PMC10989870 DOI: 10.1093/g3journal/jkae010] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/12/2023] [Accepted: 01/10/2024] [Indexed: 03/03/2024]
3
Lai WY, Nolte V, Jakšić AM, Schlötterer C. Evolution of Phenotypic Variance Provides Insights into the Genetic Basis of Adaptation. Genome Biol Evol 2024;16:evae077. [PMID: 38620076 PMCID: PMC11057206 DOI: 10.1093/gbe/evae077] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/11/2023] [Revised: 03/27/2024] [Accepted: 04/02/2024] [Indexed: 04/17/2024]  Open
4
Souto-Maior C, Serrano Negron YL, Harbison ST. Nonlinear expression patterns and multiple shifts in gene network interactions underlie robust phenotypic change in Drosophila melanogaster selected for night sleep duration. PLoS Comput Biol 2023;19:e1011389. [PMID: 37561813 PMCID: PMC10443883 DOI: 10.1371/journal.pcbi.1011389] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/15/2023] [Revised: 08/22/2023] [Accepted: 07/25/2023] [Indexed: 08/12/2023]  Open
5
Rand MD, Tennessen JM, Mackay TFC, Anholt RRH. Perspectives on the Drosophila melanogaster Model for Advances in Toxicological Science. Curr Protoc 2023;3:e870. [PMID: 37639638 PMCID: PMC10463236 DOI: 10.1002/cpz1.870] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 08/31/2023]
6
Hatchett WJ, Jueterbock AO, Kopp M, Coyer JA, Coelho SM, Hoarau G, Lipinska AP. Evolutionary dynamics of sex-biased gene expression in a young XY system: insights from the brown alga genus Fucus. THE NEW PHYTOLOGIST 2023;238:422-437. [PMID: 36597732 DOI: 10.1111/nph.18710] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/11/2022] [Accepted: 12/16/2022] [Indexed: 06/17/2023]
7
Anholt RRH, Mackay TFC. The genetic architecture of behavioral canalization. Trends Genet 2023:S0168-9525(23)00033-1. [PMID: 36878820 DOI: 10.1016/j.tig.2023.02.007] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/01/2022] [Revised: 02/10/2023] [Accepted: 02/14/2023] [Indexed: 03/07/2023]
8
Mokashi SS, Shankar V, Johnstun JA, Mackay TFC, Anholt RRH. Pleiotropic fitness effects of a Drosophila odorant-binding protein. G3 (BETHESDA, MD.) 2023;13:jkac307. [PMID: 36454098 PMCID: PMC9911060 DOI: 10.1093/g3journal/jkac307] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/19/2022] [Revised: 11/11/2022] [Accepted: 11/14/2022] [Indexed: 12/05/2022]
9
Porrazzo A, Cipressa F, De Gregorio A, De Pittà C, Sales G, Ciapponi L, Morciano P, Esposito G, Tabocchini MA, Cenci G. Low dose rate γ-irradiation protects fruit fly chromosomes from double strand breaks and telomere fusions by reducing the esi-RNA biogenesis factor Loquacious. Commun Biol 2022;5:905. [PMID: 36057690 PMCID: PMC9440893 DOI: 10.1038/s42003-022-03885-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/01/2022] [Accepted: 08/23/2022] [Indexed: 12/03/2022]  Open
10
Benoit I, Di Curzio D, Civetta A, Douville RN. Drosophila as a Model for Human Viral Neuroinfections. Cells 2022;11:cells11172685. [PMID: 36078091 PMCID: PMC9454636 DOI: 10.3390/cells11172685] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/02/2022] [Revised: 08/21/2022] [Accepted: 08/22/2022] [Indexed: 11/16/2022]  Open
11
Hine E, Runcie DE, Allen SL, Wang Y, Chenoweth SF, Blows MW, McGuigan K. Maintenance of quantitative genetic variance in complex, multi-trait phenotypes: The contribution of rare, large effect variants in two Drosophila species. Genetics 2022;222:6663993. [PMID: 35961029 PMCID: PMC9526065 DOI: 10.1093/genetics/iyac122] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/16/2022] [Accepted: 08/02/2022] [Indexed: 11/29/2022]  Open
12
Morozova TV, Shankar V, MacPherson RA, Mackay TFC, Anholt RRH. Modulation of the Drosophila transcriptome by developmental exposure to alcohol. BMC Genomics 2022;23:347. [PMID: 35524193 PMCID: PMC9074282 DOI: 10.1186/s12864-022-08559-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/19/2021] [Accepted: 04/18/2022] [Indexed: 11/21/2022]  Open
13
Wone BWM, Swanson DL. Metabolic Profiling and Integration of Metabolomic and Transcriptomic Data From Pectoralis Muscle Reveal Winter-Adaptive Metabolic Responses of Black-Capped Chickadee and American Goldfinch. Front Ecol Evol 2022. [DOI: 10.3389/fevo.2022.866130] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022]  Open
14
White RJ, Mackay E, Wilson SW, Busch-Nentwich EM. Allele-specific gene expression can underlie altered transcript abundance in zebrafish mutants. eLife 2022;11:72825. [PMID: 35175196 PMCID: PMC8884726 DOI: 10.7554/elife.72825] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/05/2021] [Accepted: 02/16/2022] [Indexed: 11/13/2022]  Open
15
Rand DM, Mossman JA, Spierer AN, Santiago JA. Mitochondria as environments for the nuclear genome in Drosophila: mitonuclear G×G×E. J Hered 2022;113:37-47. [PMID: 34964900 PMCID: PMC8851671 DOI: 10.1093/jhered/esab066] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/04/2021] [Accepted: 10/21/2021] [Indexed: 12/13/2022]  Open
16
Lange JD, Bastide H, Lack JB, Pool JE. A Population Genomic Assessment of Three Decades of Evolution in a Natural Drosophila Population. Mol Biol Evol 2021;39:6491261. [PMID: 34971382 PMCID: PMC8826484 DOI: 10.1093/molbev/msab368] [Citation(s) in RCA: 17] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]  Open
17
Watanabe LP, Riddle NC. Exercise-induced changes in climbing performance. ROYAL SOCIETY OPEN SCIENCE 2021;8:211275. [PMID: 34804578 PMCID: PMC8580468 DOI: 10.1098/rsos.211275] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/08/2021] [Accepted: 10/12/2021] [Indexed: 05/13/2023]
18
Zarubin M, Gangapshev A, Gavriljuk Y, Kazalov V, Kravchenko E. First transcriptome profiling of D. melanogaster after development in a deep underground low radiation background laboratory. PLoS One 2021;16:e0255066. [PMID: 34351964 PMCID: PMC8341612 DOI: 10.1371/journal.pone.0255066] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/25/2021] [Accepted: 07/08/2021] [Indexed: 11/19/2022]  Open
19
Houle D, Cheng C. Predicting the Evolution of Sexual Dimorphism in Gene Expression. Mol Biol Evol 2021;38:1847-1859. [PMID: 33512493 PMCID: PMC8097294 DOI: 10.1093/molbev/msaa329] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/02/2023]  Open
20
Que E, James KL, Coffey AR, Smallwood TL, Albright J, Huda MN, Pomp D, Sethupathy P, Bennett BJ. Genetic architecture modulates diet-induced hepatic mRNA and miRNA expression profiles in Diversity Outbred mice. Genetics 2021;218:6321522. [PMID: 34849860 PMCID: PMC8757298 DOI: 10.1093/genetics/iyab068] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/22/2019] [Accepted: 07/27/2020] [Indexed: 11/30/2022]  Open
21
Morgan K, Harr B, White MA, Payseur BA, Turner LM. Disrupted Gene Networks in Subfertile Hybrid House Mice. Mol Biol Evol 2021;37:1547-1562. [PMID: 32076722 PMCID: PMC7253214 DOI: 10.1093/molbev/msaa002] [Citation(s) in RCA: 12] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]  Open
22
May CM, Van den Akker EB, Zwaan BJ. The Transcriptome in Transition: Global Gene Expression Profiles of Young Adult Fruit Flies Depend More Strongly on Developmental Than Adult Diet. Front Ecol Evol 2021. [DOI: 10.3389/fevo.2021.624306] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022]  Open
23
Hamann E, Denney D, Day S, Lombardi E, Jameel MI, MacTavish R, Anderson JT. Review: Plant eco-evolutionary responses to climate change: Emerging directions. PLANT SCIENCE : AN INTERNATIONAL JOURNAL OF EXPERIMENTAL PLANT BIOLOGY 2021;304:110737. [PMID: 33568289 DOI: 10.1016/j.plantsci.2020.110737] [Citation(s) in RCA: 18] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/15/2020] [Revised: 10/23/2020] [Accepted: 10/25/2020] [Indexed: 05/14/2023]
24
Kumar S, Tunc I, Tansey TR, Pirooznia M, Harbison ST. Identification of Genes Contributing to a Long Circadian Period in Drosophila Melanogaster. J Biol Rhythms 2020;36:239-253. [PMID: 33274675 DOI: 10.1177/0748730420975946] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
25
Marshall KE, Gotthard K, Williams CM. Evolutionary impacts of winter climate change on insects. CURRENT OPINION IN INSECT SCIENCE 2020;41:54-62. [PMID: 32711362 DOI: 10.1016/j.cois.2020.06.003] [Citation(s) in RCA: 46] [Impact Index Per Article: 11.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/10/2020] [Revised: 05/29/2020] [Accepted: 06/08/2020] [Indexed: 06/11/2023]
26
Cheng 成常德 C, Houle D. Predicting Multivariate Responses of Sexual Dimorphism to Direct and Indirect Selection. Am Nat 2020;196:391-405. [PMID: 32970462 DOI: 10.1086/710353] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/04/2022]
27
Que E, James KL, Coffey AR, Smallwood TL, Albright J, Huda MN, Pomp D, Sethupathy P, Bennett BJ. Genetic Architecture Modulates Diet-Induced Hepatic mRNA and miRNA Expression Profiles in Diversity Outbred Mice. Genetics 2020;216:241-259. [PMID: 32763908 PMCID: PMC7463293 DOI: 10.1534/genetics.120.303481] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/22/2019] [Accepted: 07/27/2020] [Indexed: 02/07/2023]  Open
28
Hamann E, Pauli CS, Joly-Lopez Z, Groen SC, Rest JS, Kane NC, Purugganan MD, Franks SJ. Rapid evolutionary changes in gene expression in response to climate fluctuations. Mol Ecol 2020;30:193-206. [PMID: 32761923 PMCID: PMC7818422 DOI: 10.1111/mec.15583] [Citation(s) in RCA: 16] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/27/2020] [Revised: 07/20/2020] [Accepted: 07/30/2020] [Indexed: 12/12/2022]
29
Koch EL, Guillaume F. Restoring ancestral phenotypes is a general pattern in gene expression evolution during adaptation to new environments in Tribolium castaneum. Mol Ecol 2020;29:3938-3953. [PMID: 32844494 DOI: 10.1111/mec.15607] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/12/2019] [Revised: 06/19/2020] [Accepted: 08/10/2020] [Indexed: 12/15/2022]
30
Transcriptome profiling revealed potentially important roles of defensive gene expression in the divergence of insect biotypes: a case study with the cereal aphid Sitobion avenae. BMC Genomics 2020;21:546. [PMID: 32762647 PMCID: PMC7430832 DOI: 10.1186/s12864-020-06950-y] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/09/2019] [Accepted: 07/27/2020] [Indexed: 11/20/2022]  Open
31
Balmant KM, Noble JD, C Alves F, Dervinis C, Conde D, Schmidt HW, Vazquez AI, Barbazuk WB, Campos GDL, Resende MFR, Kirst M. Xylem systems genetics analysis reveals a key regulator of lignin biosynthesis in Populus deltoides. Genome Res 2020;30:1131-1143. [PMID: 32817237 PMCID: PMC7462072 DOI: 10.1101/gr.261438.120] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/20/2020] [Accepted: 07/13/2020] [Indexed: 02/01/2023]
32
Mérel V, Boulesteix M, Fablet M, Vieira C. Transposable elements in Drosophila. Mob DNA 2020;11:23. [PMID: 32636946 PMCID: PMC7334843 DOI: 10.1186/s13100-020-00213-z] [Citation(s) in RCA: 46] [Impact Index Per Article: 11.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/16/2020] [Accepted: 04/14/2020] [Indexed: 12/25/2022]  Open
33
Zarubin M, Yakhnenko A, Kravchenko E. Transcriptome analysis of Drosophila melanogaster laboratory strains of different geographical origin after long-term laboratory maintenance. Ecol Evol 2020;10:7082-7093. [PMID: 32760513 PMCID: PMC7391317 DOI: 10.1002/ece3.6410] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/25/2020] [Revised: 04/28/2020] [Accepted: 05/03/2020] [Indexed: 01/18/2023]  Open
34
Mauro AA, Ghalambor CK. Trade-offs, Pleiotropy, and Shared Molecular Pathways: A Unified View of Constraints on Adaptation. Integr Comp Biol 2020;60:332-347. [DOI: 10.1093/icb/icaa056] [Citation(s) in RCA: 18] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]  Open
35
Koch EL, Guillaume F. Additive and mostly adaptive plastic responses of gene expression to multiple stress in Tribolium castaneum. PLoS Genet 2020;16:e1008768. [PMID: 32379753 PMCID: PMC7238888 DOI: 10.1371/journal.pgen.1008768] [Citation(s) in RCA: 18] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/26/2019] [Revised: 05/19/2020] [Accepted: 04/08/2020] [Indexed: 12/13/2022]  Open
36
A standardized method for incorporation of drugs into food for use with Drosophila melanogaster. Anal Biochem 2020;599:113740. [PMID: 32320689 DOI: 10.1016/j.ab.2020.113740] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/09/2019] [Revised: 03/16/2020] [Accepted: 04/13/2020] [Indexed: 11/22/2022]
37
Ma WJ, Carpentier F, Giraud T, Hood ME. Differential Gene Expression between Fungal Mating Types Is Associated with Sequence Degeneration. Genome Biol Evol 2020;12:243-258. [PMID: 32058544 PMCID: PMC7150583 DOI: 10.1093/gbe/evaa028] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 02/09/2020] [Indexed: 12/13/2022]  Open
38
Collet J, Fellous S. Do traits separated by metamorphosis evolve independently? Concepts and methods. Proc Biol Sci 2020;286:20190445. [PMID: 30966980 DOI: 10.1098/rspb.2019.0445] [Citation(s) in RCA: 18] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]  Open
39
Everett LJ, Huang W, Zhou S, Carbone MA, Lyman RF, Arya GH, Geisz MS, Ma J, Morgante F, St Armour G, Turlapati L, Anholt RRH, Mackay TFC. Gene expression networks in the Drosophila Genetic Reference Panel. Genome Res 2020;30:485-496. [PMID: 32144088 PMCID: PMC7111517 DOI: 10.1101/gr.257592.119] [Citation(s) in RCA: 36] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/26/2019] [Accepted: 02/28/2020] [Indexed: 01/02/2023]
40
Huang W, Campbell T, Carbone MA, Jones WE, Unselt D, Anholt RRH, Mackay TFC. Context-dependent genetic architecture of Drosophila life span. PLoS Biol 2020;18:e3000645. [PMID: 32134916 PMCID: PMC7077879 DOI: 10.1371/journal.pbio.3000645] [Citation(s) in RCA: 38] [Impact Index Per Article: 9.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/31/2019] [Revised: 03/17/2020] [Accepted: 02/14/2020] [Indexed: 12/13/2022]  Open
41
The strength and pattern of natural selection on gene expression in rice. Nature 2020;578:572-576. [PMID: 32051590 DOI: 10.1038/s41586-020-1997-2] [Citation(s) in RCA: 61] [Impact Index Per Article: 15.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/02/2019] [Accepted: 12/13/2019] [Indexed: 01/12/2023]
42
Anholt RRH. Evolution of Epistatic Networks and the Genetic Basis of Innate Behaviors. Trends Genet 2019;36:24-29. [PMID: 31706688 DOI: 10.1016/j.tig.2019.10.005] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/08/2019] [Revised: 09/20/2019] [Accepted: 10/15/2019] [Indexed: 01/07/2023]
43
Sabir JSM, Rabah S, Yacoub H, Hajrah NH, Atef A, Al-Matary M, Edris S, Alharbi MG, Ganash M, Mahyoub J, Al-Hindi RR, Al-Ghamdi KM, Hall N, Bahieldin A, Kamli MR, Rather IA. Molecular evolution of cytochrome C oxidase-I protein of insects living in Saudi Arabia. PLoS One 2019;14:e0224336. [PMID: 31682609 PMCID: PMC6827904 DOI: 10.1371/journal.pone.0224336] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/21/2019] [Accepted: 10/10/2019] [Indexed: 11/19/2022]  Open
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Wierzbicki MP, Christie N, Pinard D, Mansfield SD, Mizrachi E, Myburg AA. A systems genetics analysis in Eucalyptus reveals coordination of metabolic pathways associated with xylan modification in wood-forming tissues. THE NEW PHYTOLOGIST 2019;223:1952-1972. [PMID: 31144333 DOI: 10.1111/nph.15972] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/17/2018] [Accepted: 05/01/2019] [Indexed: 06/09/2023]
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Liu L, Wang J, Yang JR, Wang F, He X. The expression tractability of biological traits shaped by natural selection. J Genet Genomics 2019;46:397-404. [PMID: 31471211 DOI: 10.1016/j.jgg.2019.08.001] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/29/2019] [Revised: 07/31/2019] [Accepted: 08/01/2019] [Indexed: 10/26/2022]
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Allen SL, Bonduriansky R, Chenoweth SF. Genetic constraints on microevolutionary divergence of sex-biased gene expression. Philos Trans R Soc Lond B Biol Sci 2019;373:rstb.2017.0427. [PMID: 30150225 DOI: 10.1098/rstb.2017.0427] [Citation(s) in RCA: 22] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 07/17/2018] [Indexed: 12/18/2022]  Open
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Khramtsova EA, Davis LK, Stranger BE. The role of sex in the genomics of human complex traits. Nat Rev Genet 2019;20:173-190. [PMID: 30581192 DOI: 10.1038/s41576-018-0083-1] [Citation(s) in RCA: 166] [Impact Index Per Article: 33.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
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Malacrinò A, Kimber CM, Brengdahl M, Friberg U. Heightened condition-dependence of the sexual transcriptome as a function of genetic quality in Drosophila melanogaster head tissue. Proc Biol Sci 2019;286:20190819. [PMID: 31288700 DOI: 10.1098/rspb.2019.0819] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/17/2023]  Open
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Baliga NS, Björkegren JLM, Boeke JD, Boutros M, Crawford NPS, Dudley AM, Farber CR, Jones A, Levey AI, Lusis AJ, Mak HC, Nadeau JH, Noyes MB, Petretto E, Seyfried NT, Steinmetz LM, Vonesch SC. The State of Systems Genetics in 2017. Cell Syst 2019;4:7-15. [PMID: 28125793 DOI: 10.1016/j.cels.2017.01.005] [Citation(s) in RCA: 20] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
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Cis- and trans-acting variants contribute to survivorship in a naïve Drosophila melanogaster population exposed to ryanoid insecticides. Proc Natl Acad Sci U S A 2019;116:10424-10429. [PMID: 31064874 PMCID: PMC6535026 DOI: 10.1073/pnas.1821713116] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]  Open
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