1
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Liu K, Sibille J, Dragoi G. Nested compressed co-representations of multiple sequential experiences during sleep. Nat Neurosci 2024; 27:1816-1828. [PMID: 39030341 DOI: 10.1038/s41593-024-01703-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/17/2023] [Accepted: 06/14/2024] [Indexed: 07/21/2024]
Abstract
Animals encounter and remember multiple experiences daily. During sleep, hippocampal neuronal ensembles replay past experiences and preplay future ones. Although most previous studies investigated p/replay of a single experience, it remains unclear how the hippocampus represents many experiences without major interference during sleep. By monitoring hippocampal neuronal ensembles as rats encountered 15 distinct linear track experiences, we uncovered principles for efficient multi-experience compressed p/replay representation. First, we found a serial position effect whereby the earliest and the most recent experiences had the strongest representations. Second, distinct experiences were co-represented in a multiplexed, flickering manner during nested p/replay events, which greatly enhanced the network's representational capacity. Third, spatially contiguous and disjunct track pairs were bound together into contiguous conjunctive representations during sleep. Finally, sequences spanning day-long multi-track experiences were p/replayed at hyper-compressed ratios during sleep. These coding schemes efficiently parallelize, bind and compress multiple sequential representations with reduced interference and enhanced capacity during sleep.
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Affiliation(s)
- Kefei Liu
- Department of Psychiatry, Yale School of Medicine, New Haven, CT, USA
- Bioscience and Biomedical Engineering Thrust, Systems Hub, Hong Kong University of Science and Technology (Guangzhou), Guangzhou, China
| | - Jeremie Sibille
- Department of Psychiatry, Yale School of Medicine, New Haven, CT, USA
| | - George Dragoi
- Department of Psychiatry, Yale School of Medicine, New Haven, CT, USA.
- Department of Neuroscience, Yale School of Medicine, New Haven, CT, USA.
- Wu Tsai Institute, Yale University, New Haven, CT, USA.
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2
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Parks DF, Schneider AM, Xu Y, Brunwasser SJ, Funderburk S, Thurber D, Blanche T, Dyer EL, Haussler D, Hengen KB. A nonoscillatory, millisecond-scale embedding of brain state provides insight into behavior. Nat Neurosci 2024; 27:1829-1843. [PMID: 39009836 DOI: 10.1038/s41593-024-01715-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/26/2023] [Accepted: 06/19/2024] [Indexed: 07/17/2024]
Abstract
The most robust and reliable signatures of brain states are enriched in rhythms between 0.1 and 20 Hz. Here we address the possibility that the fundamental unit of brain state could be at the scale of milliseconds and micrometers. By analyzing high-resolution neural activity recorded in ten mouse brain regions over 24 h, we reveal that brain states are reliably identifiable (embedded) in fast, nonoscillatory activity. Sleep and wake states could be classified from 100 to 101 ms of neuronal activity sampled from 100 µm of brain tissue. In contrast to canonical rhythms, this embedding persists above 1,000 Hz. This high-frequency embedding is robust to substates, sharp-wave ripples and cortical on/off states. Individual regions intermittently switched states independently of the rest of the brain, and such brief state discontinuities coincided with brief behavioral discontinuities. Our results suggest that the fundamental unit of state in the brain is consistent with the spatial and temporal scale of neuronal computation.
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Affiliation(s)
- David F Parks
- Department of Biomolecular Engineering, University of California, Santa Cruz, CA, USA
| | - Aidan M Schneider
- Department of Biology, Washington University in Saint Louis, St. Louis, MO, USA
| | - Yifan Xu
- Department of Biology, Washington University in Saint Louis, St. Louis, MO, USA
| | - Samuel J Brunwasser
- Department of Biology, Washington University in Saint Louis, St. Louis, MO, USA
| | - Samuel Funderburk
- Department of Biology, Washington University in Saint Louis, St. Louis, MO, USA
| | | | | | - Eva L Dyer
- Department of Biomedical Engineering, Georgia Institute of Technology, Atlanta, GA, USA
| | - David Haussler
- Department of Biomolecular Engineering, University of California, Santa Cruz, CA, USA
| | - Keith B Hengen
- Department of Biology, Washington University in Saint Louis, St. Louis, MO, USA.
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3
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Martial C, Piarulli A, Gosseries O, Cassol H, Ledoux D, Charland-Verville V, Laureys S. EEG signature of near-death-like experiences during syncope-induced periods of unresponsiveness. Neuroimage 2024; 298:120759. [PMID: 39067553 DOI: 10.1016/j.neuroimage.2024.120759] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/10/2024] [Revised: 06/28/2024] [Accepted: 07/25/2024] [Indexed: 07/30/2024] Open
Abstract
During fainting, disconnected consciousness may emerge in the form of dream-like experiences. Characterized by extra-ordinary and mystical features, these subjective experiences have been associated to near-death-like experiences (NDEs-like). We here aim to assess brain activity during syncope-induced disconnected consciousness by means of high-density EEG monitoring. Transient loss of consciousness and unresponsiveness were induced in 27 healthy volunteers through hyperventilation, orthostasis, and Valsalva maneuvers. Upon awakening, subjects were asked to report memories, if any. The Greyson NDE scale was used to evaluate the potential phenomenological content experienced during the syncope-induced periods of unresponsiveness. EEG source reconstruction assessed cortical activations during fainting, which were regressed out with subjective reports collected upon recovery of normal consciousness. We also conducted functional connectivity, graph-theoretic and complexity analyses. High quality high-density EEG data were obtained in 22 volunteers during syncope and unresponsiveness (lasting 22±8 s). NDE-like features (Greyson NDE scale total score ≥7/32) were apparent for eight volunteers and characterized by higher activity in delta, theta and beta2 bands in temporal and frontal regions. The richness of the NDE-like content was associated with delta, theta and beta2 bands cortical current densities, in temporal, parietal and frontal lobes, including insula, right temporoparietal junction, and cingulate cortex. Our analyses also revealed a higher complexity and that networks related to delta, theta, and beta2 bands were characterized by a higher overall connectivity paralleled by a higher segregation (i.e., local efficiency) and a higher integration (i.e., global efficiency) for the NDE-like group compared to the non-NDE-like group. Fainting-induced NDE-like episodes seem to be sustained by surges of neural activity representing promising markers of disconnected consciousness.
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Affiliation(s)
- Charlotte Martial
- Coma Science Group, GIGA-Consciousness, University of Liège, Liège, Belgium, Avenue de l'hôpital, 11, 4000 Liège, Belgium; Centre du Cerveau², University Hospital of Liège, Liège, Belgium, Avenue de l'Hôpital, 11, 4000 Liège, Belgium.
| | - Andrea Piarulli
- Coma Science Group, GIGA-Consciousness, University of Liège, Liège, Belgium, Avenue de l'hôpital, 11, 4000 Liège, Belgium; Department of Surgical, Medical, Molecular Pathology and Critical Care Medicine, University of Pisa, Pisa, Italy. Via Paradisa 2, 56124 Pisa, Italy
| | - Olivia Gosseries
- Coma Science Group, GIGA-Consciousness, University of Liège, Liège, Belgium, Avenue de l'hôpital, 11, 4000 Liège, Belgium; Centre du Cerveau², University Hospital of Liège, Liège, Belgium, Avenue de l'Hôpital, 11, 4000 Liège, Belgium
| | - Héléna Cassol
- Coma Science Group, GIGA-Consciousness, University of Liège, Liège, Belgium, Avenue de l'hôpital, 11, 4000 Liège, Belgium
| | - Didier Ledoux
- Centre du Cerveau², University Hospital of Liège, Liège, Belgium, Avenue de l'Hôpital, 11, 4000 Liège, Belgium; Department of Intensive Care and Resuscitation, University Hospital of Liège, Liège, Belgium, Avenue de l'Hôpital, 11, 4000 Liège, Belgium
| | - Vanessa Charland-Verville
- Coma Science Group, GIGA-Consciousness, University of Liège, Liège, Belgium, Avenue de l'hôpital, 11, 4000 Liège, Belgium
| | - Steven Laureys
- Coma Science Group, GIGA-Consciousness, University of Liège, Liège, Belgium, Avenue de l'hôpital, 11, 4000 Liège, Belgium; Centre du Cerveau², University Hospital of Liège, Liège, Belgium, Avenue de l'Hôpital, 11, 4000 Liège, Belgium
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4
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Huang Q, Xiao Z, Yu Q, Luo Y, Xu J, Qu Y, Dolan R, Behrens T, Liu Y. Replay-triggered brain-wide activation in humans. Nat Commun 2024; 15:7185. [PMID: 39169063 PMCID: PMC11339350 DOI: 10.1038/s41467-024-51582-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/22/2023] [Accepted: 08/08/2024] [Indexed: 08/23/2024] Open
Abstract
The consolidation of discrete experiences into a coherent narrative shapes the cognitive map, providing structured mental representations of our experiences. In this process, past memories are reactivated and replayed in sequence, fostering hippocampal-cortical dialogue. However, brain-wide engagement coinciding with sequential reactivation (or replay) of memories remains largely unexplored. In this study, employing simultaneous EEG-fMRI, we capture both the spatial and temporal dynamics of memory replay. We find that during mental simulation, past memories are replayed in fast sequences as detected via EEG. These transient replay events are associated with heightened fMRI activity in the hippocampus and medial prefrontal cortex. Replay occurrence strengthens functional connectivity between the hippocampus and the default mode network, a set of brain regions key to representing the cognitive map. On the other hand, when subjects are at rest following learning, memory reactivation of task-related items is stronger than that of pre-learning rest, and is also associated with heightened hippocampal activation and augmented hippocampal connectivity to the entorhinal cortex. Together, our findings highlight a distributed, brain-wide engagement associated with transient memory reactivation and its sequential replay.
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Affiliation(s)
- Qi Huang
- State Key Laboratory of Cognitive Neuroscience and Learning, IDG/McGovern Institute for Brain Research, Beijing Normal University, Beijing, China
- Chinese Institute for Brain Research, Beijing, China
| | - Zhibing Xiao
- State Key Laboratory of Cognitive Neuroscience and Learning, IDG/McGovern Institute for Brain Research, Beijing Normal University, Beijing, China
- Chinese Institute for Brain Research, Beijing, China
| | - Qianqian Yu
- School of Psychology, Center for Brain Disorders and Cognitive Science, Shenzhen University, Shenzhen, China
| | - Yuejia Luo
- State Key Laboratory of Cognitive Neuroscience and Learning, IDG/McGovern Institute for Brain Research, Beijing Normal University, Beijing, China
- School of Psychology, Center for Brain Disorders and Cognitive Science, Shenzhen University, Shenzhen, China
| | - Jiahua Xu
- Chinese Institute for Brain Research, Beijing, China
| | - Yukun Qu
- State Key Laboratory of Cognitive Neuroscience and Learning, IDG/McGovern Institute for Brain Research, Beijing Normal University, Beijing, China
- Chinese Institute for Brain Research, Beijing, China
| | - Raymond Dolan
- State Key Laboratory of Cognitive Neuroscience and Learning, IDG/McGovern Institute for Brain Research, Beijing Normal University, Beijing, China
- Max Planck University College London Centre for Computational Psychiatry and Ageing Research, London, UK
- Wellcome Centre for Human Neuroimaging, UCL, London, UK
| | - Timothy Behrens
- Wellcome Centre for Human Neuroimaging, UCL, London, UK
- Wellcome Centre for Integrative Neuroimaging, University of Oxford, Oxford, UK
- Sainsbury Wellcome Centre for Neural Circuits and Behaviour, UCL, London, UK
| | - Yunzhe Liu
- State Key Laboratory of Cognitive Neuroscience and Learning, IDG/McGovern Institute for Brain Research, Beijing Normal University, Beijing, China.
- Chinese Institute for Brain Research, Beijing, China.
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5
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Jin SW, Ha HS, Lee I. Selective reactivation of value- and place-dependent information during sharp-wave ripples in the intermediate and dorsal hippocampus. SCIENCE ADVANCES 2024; 10:eadn0416. [PMID: 39110810 PMCID: PMC11305392 DOI: 10.1126/sciadv.adn0416] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 11/19/2023] [Accepted: 06/26/2024] [Indexed: 08/10/2024]
Abstract
Reactivating place cells during sharp-wave ripples in the hippocampus is important for memory consolidation. However, whether hippocampal reactivation is affected by the values of events experienced by the animal is largely unknown. Here, we investigated whether place cells in the dorsal (dHP) and intermediate hippocampus (iHP) of rats are differentially reactivated depending on the value associated with a place during the learning of places associated with higher-value rewards in a T-maze. Place cells in the iHP representing the high-value location were reactivated significantly more frequently than those representing the low-value location, characteristics not observed in the dHP. In contrast, the activities of place cells in the dHP coding the routes leading to high-value locations were replayed more than those in the iHP. Our findings suggest that value-based differential reactivation patterns along the septotemporal axis of the hippocampus may play essential roles in optimizing goal-directed spatial learning for maximal reward.
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Affiliation(s)
| | - Hee-Seung Ha
- Department of Brain and Cognitive Sciences, Seoul National University, Gwanak-ro 1, Gwanak-gu, Seoul 08826, Korea
| | - Inah Lee
- Department of Brain and Cognitive Sciences, Seoul National University, Gwanak-ro 1, Gwanak-gu, Seoul 08826, Korea
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6
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Chu T, Ji Z, Zuo J, Mi Y, Zhang WH, Huang T, Bush D, Burgess N, Wu S. Firing rate adaptation affords place cell theta sweeps, phase precession, and procession. eLife 2024; 12:RP87055. [PMID: 39037765 PMCID: PMC11262797 DOI: 10.7554/elife.87055] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 07/23/2024] Open
Abstract
Hippocampal place cells in freely moving rodents display both theta phase precession and procession, which is thought to play important roles in cognition, but the neural mechanism for producing theta phase shift remains largely unknown. Here, we show that firing rate adaptation within a continuous attractor neural network causes the neural activity bump to oscillate around the external input, resembling theta sweeps of decoded position during locomotion. These forward and backward sweeps naturally account for theta phase precession and procession of individual neurons, respectively. By tuning the adaptation strength, our model explains the difference between 'bimodal cells' showing interleaved phase precession and procession, and 'unimodal cells' in which phase precession predominates. Our model also explains the constant cycling of theta sweeps along different arms in a T-maze environment, the speed modulation of place cells' firing frequency, and the continued phase shift after transient silencing of the hippocampus. We hope that this study will aid an understanding of the neural mechanism supporting theta phase coding in the brain.
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Affiliation(s)
- Tianhao Chu
- School of Psychological and Cognitive Sciences, IDG/McGovern Institute for Brain Research, Center of Quantitative Biology, Peking-Tsinghua Center for Life Sciences, Academy for Advanced Interdisciplinary Studies, Peking UniversityBeijingChina
| | - Zilong Ji
- School of Psychological and Cognitive Sciences, IDG/McGovern Institute for Brain Research, Center of Quantitative Biology, Peking-Tsinghua Center for Life Sciences, Academy for Advanced Interdisciplinary Studies, Peking UniversityBeijingChina
- Institute of Cognitive Neuroscience, University College LondonLondonUnited Kingdom
| | - Junfeng Zuo
- School of Psychological and Cognitive Sciences, IDG/McGovern Institute for Brain Research, Center of Quantitative Biology, Peking-Tsinghua Center for Life Sciences, Academy for Advanced Interdisciplinary Studies, Peking UniversityBeijingChina
| | - Yuanyuan Mi
- Department of Psychology, Tsinghua UniversityBeijingChina
| | - Wen-hao Zhang
- Lyda Hill Department of Bioinformatics, O’Donnell Brain Institute, The University of Texas Southwestern Medical CenterDallasUnited States
| | - Tiejun Huang
- School of Computer Science, Peking UniversityBeijingChina
| | - Daniel Bush
- Department of Neuroscience, Physiology and Pharmacology, University College LondonLondonUnited Kingdom
| | - Neil Burgess
- Institute of Cognitive Neuroscience, University College LondonLondonUnited Kingdom
| | - Si Wu
- School of Psychological and Cognitive Sciences, IDG/McGovern Institute for Brain Research, Center of Quantitative Biology, Peking-Tsinghua Center for Life Sciences, Academy for Advanced Interdisciplinary Studies, Peking UniversityBeijingChina
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7
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Luo DD, Giri B, Diba K, Kemere C. Extended Poisson Gaussian-Process Latent Variable Model for Unsupervised Neural Decoding. Neural Comput 2024; 36:1449-1475. [PMID: 39028957 DOI: 10.1162/neco_a_01685] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/30/2023] [Accepted: 03/28/2024] [Indexed: 07/21/2024]
Abstract
Dimension reduction on neural activity paves a way for unsupervised neural decoding by dissociating the measurement of internal neural pattern reactivation from the measurement of external variable tuning. With assumptions only on the smoothness of latent dynamics and of internal tuning curves, the Poisson gaussian-process latent variable model (P-GPLVM; Wu et al., 2017) is a powerful tool to discover the low-dimensional latent structure for high-dimensional spike trains. However, when given novel neural data, the original model lacks a method to infer their latent trajectories in the learned latent space, limiting its ability for estimating the neural reactivation. Here, we extend the P-GPLVM to enable the latent variable inference of new data constrained by previously learned smoothness and mapping information. We also describe a principled approach for the constrained latent variable inference for temporally compressed patterns of activity, such as those found in population burst events during hippocampal sharp-wave ripples, as well as metrics for assessing the validity of neural pattern reactivation and inferring the encoded experience. Applying these approaches to hippocampal ensemble recordings during active maze exploration, we replicate the result that P-GPLVM learns a latent space encoding the animal's position. We further demonstrate that this latent space can differentiate one maze context from another. By inferring the latent variables of new neural data during running, certain neural patterns are observed to reactivate, in accordance with the similarity of experiences encoded by its nearby neural trajectories in the training data manifold. Finally, reactivation of neural patterns can be estimated for neural activity during population burst events as well, allowing the identification for replay events of versatile behaviors and more general experiences. Thus, our extension of the P-GPLVM framework for unsupervised analysis of neural activity can be used to answer critical questions related to scientific discovery.
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Affiliation(s)
- Della Daiyi Luo
- Department of Electrical and Computer Engineering, Rice University, Houston, TX 77005, U.S.A.
| | - Bapun Giri
- Department of Anesthesiology, Neuroscience Graduate Program, University of Michigan Medical School, Ann Arbor, MI 48109, U.S.A.
| | - Kamran Diba
- Department of Anesthesiology, Neuroscience Graduate Program, University of Michigan Medical School, Ann Arbor, MI 48109, U.S.A.
| | - Caleb Kemere
- Department of Electrical and Computer Engineering, Rice University, Houston, TX 77005, U.S.A.
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8
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Robson E, Donahue MM, Mably AJ, Demetrovich PG, Hewitt LT, Colgin LL. Social odors drive hippocampal CA2 place cell responses to social stimuli. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2024.07.16.603738. [PMID: 39071428 PMCID: PMC11275720 DOI: 10.1101/2024.07.16.603738] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Subscribe] [Scholar Register] [Indexed: 07/30/2024]
Abstract
Hippocampal region CA2 is essential for social memory processing. Interaction with social stimuli induces changes in CA2 place cell firing during active exploration and sharp wave-ripples during rest following a social interaction. However, it is unknown whether these changes in firing patterns are caused by integration of multimodal social stimuli or by a specific sensory modality associated with a social interaction. Rodents rely heavily on chemosensory cues in the form of olfactory signals for social recognition processes. To determine the extent to which olfactory signals contribute to CA2 place cell responses to social stimuli, we recorded CA2 place cells in rats freely exploring environments containing social stimuli that included or lacked olfactory content. We found that CA2 place cell firing patterns significantly changed only when social odors were prominent. Also, place cells that increased their firing in the presence of social odors alone preferentially increased their firing during subsequent sharp wave-ripples. Our results suggest that olfactory cues are essential for changing CA2 place cell firing patterns during and after social interactions. These results support prior work suggesting CA2 performs social functions and shed light on processes underlying CA2 responses to social stimuli.
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Affiliation(s)
- Emma Robson
- Center for Learning and Memory, The University of Texas at Austin, Austin, TX 78712
- Department of Neuroscience, The University of Texas at Austin, Austin, TX 78712
| | - Margaret M. Donahue
- Center for Learning and Memory, The University of Texas at Austin, Austin, TX 78712
- Institute for Neuroscience, The University of Texas at Austin, Austin, TX 78712
| | - Alexandra J. Mably
- Center for Learning and Memory, The University of Texas at Austin, Austin, TX 78712
- Department of Neuroscience, The University of Texas at Austin, Austin, TX 78712
| | - Peyton G. Demetrovich
- Center for Learning and Memory, The University of Texas at Austin, Austin, TX 78712
- Institute for Neuroscience, The University of Texas at Austin, Austin, TX 78712
| | - Lauren T. Hewitt
- Center for Learning and Memory, The University of Texas at Austin, Austin, TX 78712
- Institute for Neuroscience, The University of Texas at Austin, Austin, TX 78712
| | - Laura Lee Colgin
- Center for Learning and Memory, The University of Texas at Austin, Austin, TX 78712
- Department of Neuroscience, The University of Texas at Austin, Austin, TX 78712
- Institute for Neuroscience, The University of Texas at Austin, Austin, TX 78712
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9
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Shin JD, Jadhav SP. Prefrontal cortical ripples mediate top-down suppression of hippocampal reactivation during sleep memory consolidation. Curr Biol 2024; 34:2801-2811.e9. [PMID: 38834064 PMCID: PMC11233241 DOI: 10.1016/j.cub.2024.05.018] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/13/2024] [Revised: 04/17/2024] [Accepted: 05/09/2024] [Indexed: 06/06/2024]
Abstract
Consolidation of initially encoded hippocampal representations in the neocortex through reactivation is crucial for long-term memory formation and is facilitated by the coordination of hippocampal sharp-wave ripples (SWRs) with cortical slow and spindle oscillations during non-REM sleep. Recent evidence suggests that high-frequency cortical ripples can also coordinate with hippocampal SWRs in support of consolidation; however, the contribution of cortical ripples to reactivation remains unclear. We used high-density, continuous recordings in the hippocampus (area CA1) and prefrontal cortex (PFC) over the course of spatial learning and show that independent PFC ripples dissociated from SWRs are prevalent in NREM sleep and predominantly suppress hippocampal activity. PFC ripples paradoxically mediate top-down suppression of hippocampal reactivation rather than coordination, and this suppression is stronger for assemblies that are reactivated during coordinated CA1-PFC ripples for consolidation of recent experiences. Further, we show non-canonical, serial coordination of independent cortical ripples with slow and spindle oscillations, which are known signatures of memory consolidation. These results establish a role for prefrontal cortical ripples in top-down regulation of behaviorally relevant hippocampal representations during consolidation.
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Affiliation(s)
- Justin D Shin
- Neuroscience Program, Department of Psychology, and Volen National Center for Complex Systems, Brandeis University, 415 South Street, Waltham, MA 02453, USA
| | - Shantanu P Jadhav
- Neuroscience Program, Department of Psychology, and Volen National Center for Complex Systems, Brandeis University, 415 South Street, Waltham, MA 02453, USA.
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10
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Breffle J, Germaine H, Shin JD, Jadhav SP, Miller P. Intrinsic dynamics of randomly clustered networks generate place fields and preplay of novel environments. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2023.10.26.564173. [PMID: 37961479 PMCID: PMC10634993 DOI: 10.1101/2023.10.26.564173] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/15/2023]
Abstract
During both sleep and awake immobility, hippocampal place cells reactivate time-compressed versions of sequences representing recently experienced trajectories in a phenomenon known as replay. Intriguingly, spontaneous sequences can also correspond to forthcoming trajectories in novel environments experienced later, in a phenomenon known as preplay. Here, we present a model showing that sequences of spikes correlated with the place fields underlying spatial trajectories in both previously experienced and future novel environments can arise spontaneously in neural circuits with random, clustered connectivity rather than pre-configured spatial maps. Moreover, the realistic place fields themselves arise in the circuit from minimal, landmark-based inputs. We find that preplay quality depends on the network's balance of cluster isolation and overlap, with optimal preplay occurring in small-world regimes of high clustering yet short path lengths. We validate the results of our model by applying the same place field and preplay analyses to previously published rat hippocampal place cell data. Our results show that clustered recurrent connectivity can generate spontaneous preplay and immediate replay of novel environments. These findings support a framework whereby novel sensory experiences become associated with preexisting "pluripotent" internal neural activity patterns.
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Affiliation(s)
- Jordan Breffle
- Neuroscience Program, Brandeis University, 415 South St., Waltham, MA 02454
| | - Hannah Germaine
- Neuroscience Program, Brandeis University, 415 South St., Waltham, MA 02454
| | - Justin D Shin
- Neuroscience Program, Brandeis University, 415 South St., Waltham, MA 02454
- Volen National Center for Complex Systems, Brandeis University, 415 South St., Waltham, MA 02454
- Department of Psychology, Brandeis University, 415 South St., Waltham, MA 02454
| | - Shantanu P Jadhav
- Neuroscience Program, Brandeis University, 415 South St., Waltham, MA 02454
- Volen National Center for Complex Systems, Brandeis University, 415 South St., Waltham, MA 02454
- Department of Psychology, Brandeis University, 415 South St., Waltham, MA 02454
| | - Paul Miller
- Neuroscience Program, Brandeis University, 415 South St., Waltham, MA 02454
- Volen National Center for Complex Systems, Brandeis University, 415 South St., Waltham, MA 02454
- Department of Biology, Brandeis University, 415 South St., Waltham, MA 02454
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11
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Iwata T, Yanagisawa T, Ikegaya Y, Smallwood J, Fukuma R, Oshino S, Tani N, Khoo HM, Kishima H. Hippocampal sharp-wave ripples correlate with periods of naturally occurring self-generated thoughts in humans. Nat Commun 2024; 15:4078. [PMID: 38778048 PMCID: PMC11111804 DOI: 10.1038/s41467-024-48367-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/21/2023] [Accepted: 04/29/2024] [Indexed: 05/25/2024] Open
Abstract
Core features of human cognition highlight the importance of the capacity to focus on information distinct from events in the here and now, such as mind wandering. However, the brain mechanisms that underpin these self-generated states remain unclear. An emerging hypothesis is that self-generated states depend on the process of memory replay, which is linked to sharp-wave ripples (SWRs), which are transient high-frequency oscillations originating in the hippocampus. Local field potentials were recorded from the hippocampus of 10 patients with epilepsy for up to 15 days, and experience sampling was used to describe their association with ongoing thought patterns. The SWR rates were higher during extended periods of time when participants' ongoing thoughts were more vivid, less desirable, had more imaginable properties, and exhibited fewer correlations with an external task. These data suggest a role for SWR in the patterns of ongoing thoughts that humans experience in daily life.
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Affiliation(s)
- Takamitsu Iwata
- Department of Neurosurgery, Graduate School of Medicine, Osaka University, Osaka, 565-0871, Japan
| | - Takufumi Yanagisawa
- Department of Neurosurgery, Graduate School of Medicine, Osaka University, Osaka, 565-0871, Japan.
- Institute for Advanced Co-Creation Studies, Osaka University, Osaka, 565-0871, Japan.
| | - Yuji Ikegaya
- Laboratory of Chemical Pharmacology, Graduate School of Pharmaceutical Sciences, The University of Tokyo, Tokyo, 113-0033, Japan
- Institute for AI and Beyond, The University of Tokyo, Tokyo, 113-0033, Japan
- National Institute of Information and Communications Technology, Center for Information and Neural Networks, Suita City, Osaka, 565-0871, Japan
| | - Jonathan Smallwood
- Department of Psychology, Queen's University, Kingston, ON, K7L 3N6, Canada
| | - Ryohei Fukuma
- Department of Neurosurgery, Graduate School of Medicine, Osaka University, Osaka, 565-0871, Japan
- Institute for Advanced Co-Creation Studies, Osaka University, Osaka, 565-0871, Japan
| | - Satoru Oshino
- Department of Neurosurgery, Graduate School of Medicine, Osaka University, Osaka, 565-0871, Japan
| | - Naoki Tani
- Department of Neurosurgery, Graduate School of Medicine, Osaka University, Osaka, 565-0871, Japan
| | - Hui Ming Khoo
- Department of Neurosurgery, Graduate School of Medicine, Osaka University, Osaka, 565-0871, Japan
| | - Haruhiko Kishima
- Department of Neurosurgery, Graduate School of Medicine, Osaka University, Osaka, 565-0871, Japan
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12
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Vöröslakos M, Zhang Y, McClain K, Huszár R, Rothstein A, Buzsáki G. ThermoMaze: A behavioral paradigm for readout of immobility-related brain events. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2023.07.25.550518. [PMID: 37546818 PMCID: PMC10402115 DOI: 10.1101/2023.07.25.550518] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 08/08/2023]
Abstract
Brain states fluctuate between exploratory and consummatory phases of behavior. These state changes affect both internal computation and the organism's responses to sensory inputs. Understanding neuronal mechanisms supporting exploratory and consummatory states and their switching requires experimental control of behavioral shifts and collecting sufficient amounts of brain data. To achieve this goal, we developed the ThermoMaze, which exploits the animal's natural warmth-seeking homeostatic behavior. By decreasing the floor temperature and selectively heating unmarked areas, mice avoid the aversive state by exploring the maze and finding the warm spot. In its design, the ThermoMaze is analogous to the widely used water maze but without the inconvenience of a wet environment and, therefore, allows the collection of physiological data in many trials. We combined the ThermoMaze with electrophysiology recording, and report that spiking activity of hippocampal CA1 neurons during sharp-wave ripple events encode the position of the animal. Thus, place-specific firing is not confined to locomotion and associated theta oscillations but persist during waking immobility and sleep at the same location. The ThermoMaze will allow for detailed studies of brain correlates of immobility, preparatory-consummatory transitions and open new options for studying behavior-mediated temperature homeostasis.
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Affiliation(s)
- Mihály Vöröslakos
- Neuroscience Institute and New York University, New York, NY 10016, USA
| | - Yunchang Zhang
- Neuroscience Institute and New York University, New York, NY 10016, USA
- Princeton Neuroscience Institute, Princeton University, Princeton, NJ 08544, USA
| | - Kathryn McClain
- Neuroscience Institute and New York University, New York, NY 10016, USA
| | - Roman Huszár
- Neuroscience Institute and New York University, New York, NY 10016, USA
| | - Aryeh Rothstein
- Neuroscience Institute and New York University, New York, NY 10016, USA
| | - György Buzsáki
- Neuroscience Institute and New York University, New York, NY 10016, USA
- Department of Neurology, School of Medicine, New York University, New York, NY 10016, USA
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13
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Coulter ME, Gillespie AK, Chu J, Denovellis EL, Nguyen TTK, Liu DF, Wadhwani K, Sharma B, Wang K, Deng X, Eden UT, Kemere C, Frank LM. Closed-loop modulation of remote hippocampal representations with neurofeedback. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2024.05.08.593085. [PMID: 38766135 PMCID: PMC11100667 DOI: 10.1101/2024.05.08.593085] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/22/2024]
Abstract
Humans can remember specific events without acting on them and can influence which memories are retrieved based on internal goals. However, current animal models of memory typically present sensory cues to trigger retrieval and assess retrieval based on action 1-5 . As a result, it is difficult to determine whether measured patterns of neural activity relate to the cue(s), the retrieved memory, or the behavior. We therefore asked whether we could develop a paradigm to isolate retrieval-related neural activity in animals without retrieval cues or the requirement of a behavioral report. To do this, we focused on hippocampal "place cells." These cells primarily emit spiking patterns that represent the animal's current location (local representations), but they can also generate representations of previously visited locations distant from the animal's current location (remote representations) 6-13 . It is not known whether animals can deliberately engage specific remote representations, and if so, whether this engagement would occur during specific brain states. So, we used a closed-loop neurofeedback system to reward expression of remote representations that corresponded to uncued, experimenter-selected locations, and found that rats could increase the prevalence of these specific remote representations over time; thus, demonstrating memory retrieval modulated by internal goals in an animal model. These representations occurred predominately during periods of immobility but outside of hippocampal sharp-wave ripple (SWR) 13-15 events. This paradigm enables future direct studies of memory retrieval mechanisms in the healthy brain and in models of neurological disorders.
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14
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Qiu Y, Li H, Liao J, Chen K, Wu X, Liu B, Huang R. Forming cognitive maps for abstract spaces: the roles of the human hippocampus and orbitofrontal cortex. Commun Biol 2024; 7:517. [PMID: 38693344 PMCID: PMC11063219 DOI: 10.1038/s42003-024-06214-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/09/2023] [Accepted: 04/18/2024] [Indexed: 05/03/2024] Open
Abstract
How does the human brain construct cognitive maps for decision-making and inference? Here, we conduct an fMRI study on a navigation task in multidimensional abstract spaces. Using a deep neural network model, we assess learning levels and categorized paths into exploration and exploitation stages. Univariate analyses show higher activation in the bilateral hippocampus and lateral prefrontal cortex during exploration, positively associated with learning level and response accuracy. Conversely, the bilateral orbitofrontal cortex (OFC) and retrosplenial cortex show higher activation during exploitation, negatively associated with learning level and response accuracy. Representational similarity analysis show that the hippocampus, entorhinal cortex, and OFC more accurately represent destinations in exploitation than exploration stages. These findings highlight the collaboration between the medial temporal lobe and prefrontal cortex in learning abstract space structures. The hippocampus may be involved in spatial memory formation and representation, while the OFC integrates sensory information for decision-making in multidimensional abstract spaces.
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Affiliation(s)
- Yidan Qiu
- School of Psychology; Center for the Study of Applied Psychology; Key Laboratory of Mental Health and Cognitive Science of Guangdong Province; Key Laboratory of Brain, Cognition and Education Sciences, Ministry of Education; South China Normal University, Guangzhou, 510631, China
| | - Huakang Li
- School of Computer Science and Engineering, South China University of Technology, Guangzhou, 510006, China
| | - Jiajun Liao
- School of Psychology; Center for the Study of Applied Psychology; Key Laboratory of Mental Health and Cognitive Science of Guangdong Province; Key Laboratory of Brain, Cognition and Education Sciences, Ministry of Education; South China Normal University, Guangzhou, 510631, China
| | - Kemeng Chen
- School of Psychology; Center for the Study of Applied Psychology; Key Laboratory of Mental Health and Cognitive Science of Guangdong Province; Key Laboratory of Brain, Cognition and Education Sciences, Ministry of Education; South China Normal University, Guangzhou, 510631, China
| | - Xiaoyan Wu
- School of Psychology; Center for the Study of Applied Psychology; Key Laboratory of Mental Health and Cognitive Science of Guangdong Province; Key Laboratory of Brain, Cognition and Education Sciences, Ministry of Education; South China Normal University, Guangzhou, 510631, China
| | - Bingyi Liu
- School of Psychology; Center for the Study of Applied Psychology; Key Laboratory of Mental Health and Cognitive Science of Guangdong Province; Key Laboratory of Brain, Cognition and Education Sciences, Ministry of Education; South China Normal University, Guangzhou, 510631, China
| | - Ruiwang Huang
- School of Psychology; Center for the Study of Applied Psychology; Key Laboratory of Mental Health and Cognitive Science of Guangdong Province; Key Laboratory of Brain, Cognition and Education Sciences, Ministry of Education; South China Normal University, Guangzhou, 510631, China.
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15
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Mou X, Ji D. Observational activation of anterior cingulate cortical neurons coordinates hippocampal replay in social learning. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2024.03.31.587484. [PMID: 38617364 PMCID: PMC11014478 DOI: 10.1101/2024.03.31.587484] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 04/16/2024]
Abstract
Social learning enables a subject to make decisions by observing the actions of another. How neural circuits acquire relevant information during observation to guide subsequent behavior is unknown. Utilizing an observational spatial working memory task, we show that neurons in the rat anterior cingulate cortex (ACC) associated with spatial trajectories during self-running in a maze are activated when observing another rat running the same maze. The observation-induced ACC activities are reduced in error trials and are correlated with activities of hippocampal place cells representing the same trajectories. The ACC activities during observation also predict subsequent hippocampal place cell activities during sharp-wave ripples and spatial contents of hippocampal replay prior to self-running. The results support that ACC neurons involved in decisions during self-running are reactivated during observation and coordinate hippocampal replay to guide subsequent spatial navigation.
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Affiliation(s)
- Xiang Mou
- Department of Neuroscience, Baylor College of Medicine; One Baylor Plaza, Houston, TX 77030, USA
| | - Daoyun Ji
- Department of Neuroscience, Baylor College of Medicine; One Baylor Plaza, Houston, TX 77030, USA
- Department of Molecular and Cellular Biology, Baylor College of Medicine; One Baylor Plaza, Houston, TX 77030, USA
- Lead Contact
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16
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Yang Y, Leopold DA, Duyn JH, Liu X. Hippocampal replay sequence governed by spontaneous brain-wide dynamics. PNAS NEXUS 2024; 3:pgae078. [PMID: 38562584 PMCID: PMC10983782 DOI: 10.1093/pnasnexus/pgae078] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 08/23/2023] [Accepted: 02/01/2024] [Indexed: 04/04/2024]
Abstract
Neurons in the hippocampus exhibit spontaneous spiking activity during rest that appears to recapitulate previously experienced events. While this replay activity is frequently linked to memory consolidation and learning, the underlying mechanisms are not well understood. Recent large-scale neural recordings in mice have demonstrated that resting-state spontaneous activity is expressed as quasi-periodic cascades of spiking activity that pervade the forebrain, with each cascade engaging a high proportion of recorded neurons. Hippocampal ripples are known to be coordinated with cortical dynamics; however, less is known about the occurrence of replay activity relative to other brain-wide spontaneous events. Here we analyzed responses across the mouse brain to multiple viewings of natural movies, as well as subsequent patterns of neural activity during rest. We found that hippocampal neurons showed time-selectivity, with individual neurons responding consistently during particular moments of the movie. During rest, the population of time-selective hippocampal neurons showed both forward and time-reversed replay activity that matched the sequence observed in the movie. Importantly, these replay events were strongly time-locked to brain-wide spiking cascades, with forward and time-reversed replay activity associated with distinct cascade types. Thus, intrinsic hippocampal replay activity is temporally structured according to large-scale spontaneous physiology affecting areas throughout the forebrain. These findings shed light on the coordination between hippocampal and cortical circuits thought to be critical for memory consolidation.
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Affiliation(s)
- Yifan Yang
- Department of Biomedical Engineering, The Pennsylvania State University, University Park, PA 16802, USA
| | - David A Leopold
- Neurophysiology Imaging Facility, National Institute of Mental Health, National Institute of Neurological Disorders and Stroke, and National Eye Institute, National Institutes of Health, Bethesda, MD 20892, USA
- Section on Cognitive Neurophysiology and Imaging, Laboratory of Neuropsychology, National Institute of Mental Health, National Institutes of Health, Bethesda, MD 20892, USA
| | - Jeff H Duyn
- Advanced MRI Section, Laboratory of Functional and Molecular Imaging, National Institute of Neurological Disorders and Stroke, National Institutes of Health, Bethesda, MD 20892, USA
| | - Xiao Liu
- Department of Biomedical Engineering, The Pennsylvania State University, University Park, PA 16802, USA
- Institute for Computational and Data Sciences, The Pennsylvania State University, University Park, PA 16802, USA
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17
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Hoffman C, Cheng J, Morales R, Ji D, Dabaghian Y. Altered patterning of neural activity in a tauopathy mouse model. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2024.03.23.586417. [PMID: 38585991 PMCID: PMC10996513 DOI: 10.1101/2024.03.23.586417] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 04/09/2024]
Abstract
Alzheimer's disease (AD) is a complex neurodegenerative condition that manifests at multiple levels and involves a spectrum of abnormalities ranging from the cellular to cognitive. Here, we investigate the impact of AD-related tau-pathology on hippocampal circuits in mice engaged in spatial navigation, and study changes of neuronal firing and dynamics of extracellular fields. While most studies are based on analyzing instantaneous or time-averaged characteristics of neuronal activity, we focus on intermediate timescales-spike trains and waveforms of oscillatory potentials, which we consider as single entities. We find that, in healthy mice, spike arrangements and wave patterns (series of crests or troughs) are coupled to the animal's location, speed, and acceleration. In contrast, in tau-mice, neural activity is structurally disarrayed: brainwave cadence is detached from locomotion, spatial selectivity is lost, the spike flow is scrambled. Importantly, these alterations start early and accumulate with age, which exposes progressive disinvolvement the hippocampus circuit in spatial navigation. These features highlight qualitatively different neurodynamics than the ones provided by conventional analyses, and are more salient, thus revealing a new level of the hippocampal circuit disruptions.
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Affiliation(s)
- C Hoffman
- Department of Neurology, The University of Texas McGovern Medical School, 6431 Fannin St, Houston, TX 77030
| | - J Cheng
- Department of Neuroscience, Baylor College of Medicine, Houston, TX 77030
| | - R Morales
- Department of Neurology, The University of Texas McGovern Medical School, 6431 Fannin St, Houston, TX 77030
| | - D Ji
- Department of Neuroscience, Baylor College of Medicine, Houston, TX 77030
| | - Y Dabaghian
- Department of Neurology, The University of Texas McGovern Medical School, 6431 Fannin St, Houston, TX 77030
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18
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Deceuninck L, Kloosterman F. Disruption of awake sharp-wave ripples does not affect memorization of locations in repeated-acquisition spatial memory tasks. eLife 2024; 13:e84004. [PMID: 38530125 PMCID: PMC11018343 DOI: 10.7554/elife.84004] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/06/2022] [Accepted: 03/25/2024] [Indexed: 03/27/2024] Open
Abstract
Storing and accessing memories is required to successfully perform day-to-day tasks, for example for engaging in a meaningful conversation. Previous studies in both rodents and primates have correlated hippocampal cellular activity with behavioral expression of memory. A key role has been attributed to awake hippocampal replay - a sequential reactivation of neurons representing a trajectory through space. However, it is unclear if awake replay impacts immediate future behavior, gradually creates and stabilizes long-term memories over a long period of time (hours and longer), or enables the temporary memorization of relevant events at an intermediate time scale (seconds to minutes). In this study, we aimed to address the uncertainty around the timeframe of impact of awake replay by collecting causal evidence from behaving rats. We detected and disrupted sharp wave ripples (SWRs) - signatures of putative replay events - using electrical stimulation of the ventral hippocampal commissure in rats that were trained on three different spatial memory tasks. In each task, rats were required to memorize a new set of locations in each trial or each daily session. Interestingly, the rats performed equally well with or without SWR disruptions. These data suggest that awake SWRs - and potentially replay - does not affect the immediate behavior nor the temporary memorization of relevant events at a short timescale that are required to successfully perform the spatial tasks. Based on these results, we hypothesize that the impact of awake replay on memory and behavior is long-term and cumulative over time.
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Affiliation(s)
- Lies Deceuninck
- KU Leuven, Department of Physics and Astronomy, Soft Matter and BiophysicsHeverleeBelgium
- NERF-NeuroElectronics Research Flanders, Kloosterman LabHeverleeBelgium
| | - Fabian Kloosterman
- NERF-NeuroElectronics Research Flanders, Kloosterman LabHeverleeBelgium
- KU Leuven, Faculty of Psychology & Educational SciencesLeuvenBelgium
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19
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Jimenez CA, Meyer ML. The dorsomedial prefrontal cortex prioritizes social learning during rest. Proc Natl Acad Sci U S A 2024; 121:e2309232121. [PMID: 38466844 PMCID: PMC10962978 DOI: 10.1073/pnas.2309232121] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/01/2023] [Accepted: 02/12/2024] [Indexed: 03/13/2024] Open
Abstract
Sociality is a defining feature of the human experience: We rely on others to ensure survival and cooperate in complex social networks to thrive. Are there brain mechanisms that help ensure we quickly learn about our social world to optimally navigate it? We tested whether portions of the brain's default network engage "by default" to quickly prioritize social learning during the memory consolidation process. To test this possibility, participants underwent functional MRI (fMRI) while viewing scenes from the documentary film, Samsara. This film shows footage of real people and places from around the world. We normed the footage to select scenes that differed along the dimension of sociality, while matched on valence, arousal, interestingness, and familiarity. During fMRI, participants watched the "social" and "nonsocial" scenes, completed a rest scan, and a surprise recognition memory test. Participants showed superior social (vs. nonsocial) memory performance, and the social memory advantage was associated with neural pattern reinstatement during rest in the dorsomedial prefrontal cortex (DMPFC), a key node of the default network. Moreover, it was during early rest that DMPFC social pattern reinstatement was greatest and predicted subsequent social memory performance most strongly, consistent with the "prioritization" account. Results simultaneously update 1) theories of memory consolidation, which have not addressed how social information may be prioritized in the learning process, and 2) understanding of default network function, which remains to be fully characterized. More broadly, the results underscore the inherent human drive to understand our vastly social world.
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Affiliation(s)
| | - Meghan L. Meyer
- Department of Psychology, Columbia University, New York, NY10027
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20
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Puhger K, Crestani AP, Diniz CRF, Wiltgen BJ. The hippocampus contributes to retroactive stimulus associations during trace fear conditioning. iScience 2024; 27:109035. [PMID: 38375237 PMCID: PMC10875141 DOI: 10.1016/j.isci.2024.109035] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/30/2023] [Revised: 12/04/2023] [Accepted: 01/23/2024] [Indexed: 02/21/2024] Open
Abstract
Binding events that occur at different times are essential for memory formation. In trace fear conditioning, animals associate a tone and footshock despite no temporal overlap. The hippocampus is thought to mediate this learning by maintaining a memory of the tone until shock occurrence, however, evidence for sustained hippocampal tone representations is lacking. Here, we demonstrate a retrospective role for the hippocampus in trace fear conditioning. Bulk calcium imaging revealed sustained increases in CA1 activity after footshock that were not observed after tone termination. Optogenetic silencing of CA1 immediately after footshock impaired subsequent memory. Additionally, footshock increased the number of sharp-wave ripples compared to baseline during conditioning. Therefore, post-shock hippocampal activity likely supports learning by reactivating and linking latent tone and shock representations. These findings highlight an underappreciated function of post-trial hippocampal activity in enabling retroactive temporal associations during new learning, as opposed to persistent maintenance of stimulus representations.
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Affiliation(s)
- Kyle Puhger
- Department of Psychology, University of California, Davis, 135 Young Hall, 1 Shields Avenue, Davis, CA 95616, USA
- Center for Neuroscience, University of California, Davis, 1544 Newton Court, Davis, CA 95618, USA
| | - Ana P. Crestani
- Center for Neuroscience, University of California, Davis, 1544 Newton Court, Davis, CA 95618, USA
| | - Cassiano R.A. F. Diniz
- Center for Neuroscience, University of California, Davis, 1544 Newton Court, Davis, CA 95618, USA
| | - Brian J. Wiltgen
- Department of Psychology, University of California, Davis, 135 Young Hall, 1 Shields Avenue, Davis, CA 95616, USA
- Center for Neuroscience, University of California, Davis, 1544 Newton Court, Davis, CA 95618, USA
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21
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Calvin OL, Erickson MT, Walters CJ, Redish AD. Dorsal hippocampus represents locations to avoid as well as locations to approach during approach-avoidance conflict. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2024.03.10.584295. [PMID: 38559154 PMCID: PMC10979882 DOI: 10.1101/2024.03.10.584295] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 04/04/2024]
Abstract
Worrying about perceived threats is a hallmark of multiple psychological disorders including anxiety. This concern about future events is particularly important when an individual is faced with an approach-avoidance conflict. Potential goals to approach are known to be represented in the dorsal hippocampus during theta sweeps. Similarly, important non-local information is represented during hippocampal high synchrony events (HSEs), which are correlated with sharp-wave ripples (SWRs). It is likely that potential future threats may be similarly represented. We examined how threats and rewards were represented within the hippocampus during approach-avoidance conflicts in rats faced with a predator-like robot guarding a food reward. We found representations of the pseudo-predator during HSEs when hesitating in the nest, and during theta prior to retreating as the rats approached the pseudo-predator. After the first attack, we observed new place fields appearing at the location of the robot (not the location the rat was when attacked). The anxiolytic diazepam reduced anxiety-like behavior and altered hippocampal local field potentials, including reducing SWRs, suggesting that one potential mechanism of diazepam's actions may be through altered representations of imagined threat. These results suggest that hippocampal representation of potential threats could be an important mechanism that underlies worry and a potential target for anxiolytics.
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Affiliation(s)
- Olivia L. Calvin
- Department of Neuroscience, University of Minnesota, Minneapolis MN 55455
| | | | | | - A. David Redish
- Department of Neuroscience, University of Minnesota, Minneapolis MN 55455
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22
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Luo DD, Giri B, Diba K, Kemere C. Extended Poisson Gaussian-Process Latent Variable Model for Unsupervised Neural Decoding. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2024.03.04.583340. [PMID: 38496669 PMCID: PMC10942371 DOI: 10.1101/2024.03.04.583340] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 03/19/2024]
Abstract
Dimension reduction on neural activity paves a way for unsupervised neural decoding by dissociating the measurement of internal neural state repetition from the measurement of external variable tuning. With assumptions only on the smoothness of latent dynamics and of internal tuning curves, the Poisson Gaussian-process latent variable model (P-GPLVM) (Wu et al., 2017) is a powerful tool to discover the low-dimensional latent structure for high-dimensional spike trains. However, when given novel neural data, the original model lacks a method to infer their latent trajectories in the learned latent space, limiting its ability for estimating the internal state repetition. Here, we extend the P-GPLVM to enable the latent variable inference of new data constrained by previously learned smoothness and mapping information. We also describe a principled approach for the constrained latent variable inference for temporally-compressed patterns of activity, such as those found in population burst events (PBEs) during hippocampal sharp-wave ripples, as well as metrics for assessing whether the inferred new latent variables are congruent with a previously learned manifold in the latent space. Applying these approaches to hippocampal ensemble recordings during active maze exploration, we replicate the result that P-GPLVM learns a latent space encoding the animal's position. We further demonstrate that this latent space can differentiate one maze context from another. By inferring the latent variables of new neural data during running, certain internal neural states are observed to repeat, which is in accordance with the similarity of experiences encoded by its nearby neural trajectories in the training data manifold. Finally, repetition of internal neural states can be estimated for neural activity during PBEs as well, allowing the identification for replay events of versatile behaviors and more general experiences. Thus, our extension of the P-GPLVM framework for unsupervised analysis of neural activity can be used to answer critical questions related to scientific discovery.
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Affiliation(s)
- Della Daiyi Luo
- Department of Electrical and Computer Engineering, Rice University, Houston, TX 77005, USA
| | - Bapun Giri
- Department of Anesthesiology, Neuroscience Graduate Program, University of Michigan Medical School, Ann Arbor, MI 48109, USA
| | - Kamran Diba
- Department of Anesthesiology, Neuroscience Graduate Program, University of Michigan Medical School, Ann Arbor, MI 48109, USA
| | - Caleb Kemere
- Department of Electrical and Computer Engineering, Rice University, Houston, TX 77005, USA
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23
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Zimmerman CA, Pan-Vazquez A, Wu B, Keppler EF, Guthman EM, Fetcho RN, Bolkan SS, McMannon B, Lee J, Hoag AT, Lynch LA, Janarthanan SR, López Luna JF, Bondy AG, Falkner AL, Wang SSH, Witten IB. A neural mechanism for learning from delayed postingestive feedback. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2023.10.06.561214. [PMID: 37873112 PMCID: PMC10592633 DOI: 10.1101/2023.10.06.561214] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/25/2023]
Abstract
Animals learn the value of foods based on their postingestive effects and thereby develop aversions to foods that are toxic1-6 and preferences to those that are nutritious7-14. However, it remains unclear how the brain is able to assign credit to flavors experienced during a meal with postingestive feedback signals that can arise after a substantial delay. Here, we reveal an unexpected role for postingestive reactivation of neural flavor representations in this temporal credit assignment process. To begin, we leverage the fact that mice learn to associate novel15-18, but not familiar, flavors with delayed gastric malaise signals to investigate how the brain represents flavors that support aversive postingestive learning. Surveying cellular resolution brainwide activation patterns reveals that a network of amygdala regions is unique in being preferentially activated by novel flavors across every stage of the learning process: the initial meal, delayed malaise, and memory retrieval. By combining high-density recordings in the amygdala with optogenetic stimulation of genetically defined hindbrain malaise cells, we find that postingestive malaise signals potently and specifically reactivate amygdalar novel flavor representations from a recent meal. The degree of malaise-driven reactivation of individual neurons predicts strengthening of flavor responses upon memory retrieval, leading to stabilization of the population-level representation of the recently consumed flavor. In contrast, meals without postingestive consequences degrade neural flavor representations as flavors become familiar and safe. Thus, our findings demonstrate that interoceptive reactivation of amygdalar flavor representations provides a neural mechanism to resolve the temporal credit assignment problem inherent to postingestive learning.
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Affiliation(s)
| | | | - Bichan Wu
- Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA
| | - Emma F Keppler
- Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA
| | - Eartha Mae Guthman
- Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA
| | - Robert N Fetcho
- Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA
| | - Scott S Bolkan
- Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA
| | - Brenna McMannon
- Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA
| | - Junuk Lee
- Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA
| | - Austin T Hoag
- Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA
| | - Laura A Lynch
- Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA
| | | | - Juan F López Luna
- Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA
| | - Adrian G Bondy
- Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA
| | - Annegret L Falkner
- Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA
| | - Samuel S-H Wang
- Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA
| | - Ilana B Witten
- Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA
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24
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Dragoi G. The generative grammar of the brain: a critique of internally generated representations. Nat Rev Neurosci 2024; 25:60-75. [PMID: 38036709 DOI: 10.1038/s41583-023-00763-0] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 10/18/2023] [Indexed: 12/02/2023]
Abstract
The past decade of progress in neurobiology has uncovered important organizational principles for network preconfiguration and neuronal selection that suggest a generative grammar exists in the brain. In this Perspective, I discuss the competence of the hippocampal neural network to generically express temporally compressed sequences of neuronal firing that represent novel experiences, which is envisioned as a form of generative neural syntax supporting a neurobiological perspective on brain function. I compare this neural competence with the hippocampal network performance that represents specific experiences with higher fidelity after new learning during replay, which is envisioned as a form of neural semantic that supports a complementary neuropsychological perspective. I also demonstrate how the syntax of network competence emerges a priori during early postnatal life and is followed by the later development of network performance that enables rapid encoding and memory consolidation. Thus, I propose that this generative grammar of the brain is essential for internally generated representations, which are crucial for the cognitive processes underlying learning and memory, prospection, and inference, which ultimately underlie our reason and representation of the world.
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Affiliation(s)
- George Dragoi
- Department of Psychiatry, Yale University School of Medicine, New Haven, CT, USA.
- Department of Neuroscience, Yale University School of Medicine, New Haven, CT, USA.
- Wu Tsai Institute, Yale University, New Haven, CT, USA.
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25
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Nguyen ND, Lutas A, Amsalem O, Fernando J, Ahn AYE, Hakim R, Vergara J, McMahon J, Dimidschstein J, Sabatini BL, Andermann ML. Cortical reactivations predict future sensory responses. Nature 2024; 625:110-118. [PMID: 38093002 PMCID: PMC11014741 DOI: 10.1038/s41586-023-06810-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/10/2022] [Accepted: 10/31/2023] [Indexed: 01/05/2024]
Abstract
Many theories of offline memory consolidation posit that the pattern of neurons activated during a salient sensory experience will be faithfully reactivated, thereby stabilizing the pattern1,2. However, sensory-evoked patterns are not stable but, instead, drift across repeated experiences3-6. Here, to investigate the relationship between reactivations and the drift of sensory representations, we imaged the calcium activity of thousands of excitatory neurons in the mouse lateral visual cortex. During the minute after a visual stimulus, we observed transient, stimulus-specific reactivations, often coupled with hippocampal sharp-wave ripples. Stimulus-specific reactivations were abolished by local cortical silencing during the preceding stimulus. Reactivations early in a session systematically differed from the pattern evoked by the previous stimulus-they were more similar to future stimulus response patterns, thereby predicting both within-day and across-day representational drift. In particular, neurons that participated proportionally more or less in early stimulus reactivations than in stimulus response patterns gradually increased or decreased their future stimulus responses, respectively. Indeed, we could accurately predict future changes in stimulus responses and the separation of responses to distinct stimuli using only the rate and content of reactivations. Thus, reactivations may contribute to a gradual drift and separation in sensory cortical response patterns, thereby enhancing sensory discrimination7.
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Affiliation(s)
- Nghia D Nguyen
- Program in Neuroscience, Harvard University, Boston, MA, USA
| | - Andrew Lutas
- Division of Endocrinology, Department of Medicine, Beth Israel Deaconess Medical Center, Boston, MA, USA
- Diabetes, Endocrinology and Obesity Branch, National Institutes of Diabetes and Digestive and Kidney Diseases, National Institutes of Health, Bethesda, MD, USA
| | - Oren Amsalem
- Division of Endocrinology, Department of Medicine, Beth Israel Deaconess Medical Center, Boston, MA, USA
| | - Jesseba Fernando
- Division of Endocrinology, Department of Medicine, Beth Israel Deaconess Medical Center, Boston, MA, USA
| | - Andy Young-Eon Ahn
- Division of Endocrinology, Department of Medicine, Beth Israel Deaconess Medical Center, Boston, MA, USA
| | - Richard Hakim
- Program in Neuroscience, Harvard University, Boston, MA, USA
- Howard Hughes Medical Institute, Department of Neurobiology, Harvard Medical School, Boston, MA, USA
| | - Josselyn Vergara
- Stanley Center for Psychiatric Research, Broad Institute of Harvard and MIT, Cambridge, MA, USA
| | - Justin McMahon
- Stanley Center for Psychiatric Research, Broad Institute of Harvard and MIT, Cambridge, MA, USA
| | - Jordane Dimidschstein
- Stanley Center for Psychiatric Research, Broad Institute of Harvard and MIT, Cambridge, MA, USA
| | - Bernardo L Sabatini
- Program in Neuroscience, Harvard University, Boston, MA, USA
- Howard Hughes Medical Institute, Department of Neurobiology, Harvard Medical School, Boston, MA, USA
| | - Mark L Andermann
- Program in Neuroscience, Harvard University, Boston, MA, USA.
- Division of Endocrinology, Department of Medicine, Beth Israel Deaconess Medical Center, Boston, MA, USA.
- Department of Neurobiology, Harvard Medical School, Boston, MA, USA.
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26
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Veselic S, Muller TH, Gutierrez E, Behrens TEJ, Hunt LT, Butler JL, Kennerley SW. A cognitive map for value-guided choice in ventromedial prefrontal cortex. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2023:2023.12.15.571895. [PMID: 38168410 PMCID: PMC10760117 DOI: 10.1101/2023.12.15.571895] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/05/2024]
Abstract
The prefrontal cortex is crucial for economic decision-making and representing the value of options. However, how such representations facilitate flexible decisions remains unknown. We reframe economic decision-making in prefrontal cortex in line with representations of structure within the medial temporal lobe because such cognitive map representations are known to facilitate flexible behaviour. Specifically, we framed choice between different options as a navigation process in value space. Here we show that choices in a 2D value space defined by reward magnitude and probability were represented with a grid-like code, analogous to that found in spatial navigation. The grid-like code was present in ventromedial prefrontal cortex (vmPFC) local field potential theta frequency and the result replicated in an independent dataset. Neurons in vmPFC similarly contained a grid-like code, in addition to encoding the linear value of the chosen option. Importantly, both signals were modulated by theta frequency - occurring at theta troughs but on separate theta cycles. Furthermore, we found sharp-wave ripples - a key neural signature of planning and flexible behaviour - in vmPFC, which were modulated by accuracy and reward. These results demonstrate that multiple cognitive map-like computations are deployed in vmPFC during economic decision-making, suggesting a new framework for the implementation of choice in prefrontal cortex.
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Affiliation(s)
- Sebastijan Veselic
- Department of Experimental Psychology, University of Oxford, UK
- Clinical and Movement Neurosciences, Department of Motor Neuroscience, University College London, London, UK
| | - Timothy H Muller
- Department of Experimental Psychology, University of Oxford, UK
- Clinical and Movement Neurosciences, Department of Motor Neuroscience, University College London, London, UK
| | - Elena Gutierrez
- Department of Experimental Psychology, University of Oxford, UK
- Clinical and Movement Neurosciences, Department of Motor Neuroscience, University College London, London, UK
| | - Timothy E J Behrens
- Wellcome Centre for Human Neuroimaging, University College London, London, UK
- Wellcome Centre for Integrative Neuroimaging, University of Oxford, FMRIB, John Radcliffe Hospital, Oxford, UK
- Sainsbury Wellcome Centre for Neural Circuits and Behaviour College, University College London, London, UK
| | - Laurence T Hunt
- Department of Experimental Psychology, University of Oxford, UK
- Department of Psychiatry, University of Oxford, Oxford, UK
| | - James L Butler
- Department of Experimental Psychology, University of Oxford, UK
| | - Steven W Kennerley
- Department of Experimental Psychology, University of Oxford, UK
- Clinical and Movement Neurosciences, Department of Motor Neuroscience, University College London, London, UK
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27
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Shin JD, Jadhav SP. Cortical ripples mediate top-down suppression of hippocampal reactivation during sleep memory consolidation. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2023:2023.12.12.571373. [PMID: 38168420 PMCID: PMC10760112 DOI: 10.1101/2023.12.12.571373] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/05/2024]
Abstract
Consolidation of initially encoded hippocampal representations in the neocortex through reactivation is crucial for long-term memory formation, and is facilitated by the coordination of hippocampal sharp-wave ripples (SWRs) with cortical oscillations during non-REM sleep. However, the contribution of high-frequency cortical ripples to consolidation is still unclear. We used continuous recordings in the hippocampus and prefrontal cortex (PFC) over the course of spatial learning and show that independent PFC ripples, when dissociated from SWRs, predominantly suppress hippocampal activity in non-REM sleep. PFC ripples paradoxically mediate top-down suppression of hippocampal reactivation, which is inversely related to reactivation strength during coordinated CA1-PFC ripples. Further, we show non-canonical, serial coordination of ripples with cortical slow and spindle oscillations. These results establish a role for cortical ripples in regulating consolidation.
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Affiliation(s)
- Justin D. Shin
- Neuroscience Program, Department of Psychology, and Volen National Center for Complex Systems, Brandeis University, Waltham, MA 02453, USA
| | - Shantanu P. Jadhav
- Neuroscience Program, Department of Psychology, and Volen National Center for Complex Systems, Brandeis University, Waltham, MA 02453, USA
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28
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Huelin Gorriz M, Takigawa M, Bendor D. The role of experience in prioritizing hippocampal replay. Nat Commun 2023; 14:8157. [PMID: 38071221 PMCID: PMC10710481 DOI: 10.1038/s41467-023-43939-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/31/2023] [Accepted: 11/24/2023] [Indexed: 12/18/2023] Open
Abstract
During sleep, recent memories are replayed by the hippocampus, leading to their consolidation, with a higher priority given to salient experiences. To examine the role of replay in the selective strengthening of memories, we recorded large ensembles of hippocampal place cells while male rats ran repeated spatial trajectories on two linear tracks, differing in either their familiarity or number of laps run. We observed that during sleep, the rate of replay events for a given track increased proportionally with the number of spatial trajectories run by the animal. In contrast, the rate of sleep replay events decreased if the animal was more familiar with the track. Furthermore, we find that the cumulative number of awake replay events occurring during behavior, influenced by both the novelty and duration of an experience, predicts which memories are prioritized for sleep replay, providing a more parsimonious neural correlate for the selective strengthening of memories.
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Affiliation(s)
- Marta Huelin Gorriz
- Institute of Behavioural Neuroscience (IBN), University College London (UCL), London, WC1H 0AP, UK
| | - Masahiro Takigawa
- Institute of Behavioural Neuroscience (IBN), University College London (UCL), London, WC1H 0AP, UK
| | - Daniel Bendor
- Institute of Behavioural Neuroscience (IBN), University College London (UCL), London, WC1H 0AP, UK.
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29
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Yang W, Sun C, Huszár R, Hainmueller T, Buzsáki G. Selection of experience for memory by hippocampal sharp wave ripples. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2023:2023.11.07.565935. [PMID: 37987008 PMCID: PMC10659301 DOI: 10.1101/2023.11.07.565935] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/22/2023]
Abstract
A general wisdom is that experiences need to be tagged during learning for further consolidation. However, brain mechanisms that select experiences for lasting memory are not known. Combining large-scale neural recordings with a novel application of dimensionality reduction techniques, we observed that successive traversals in the maze were tracked by continuously drifting populations of neurons, providing neuronal signatures of both places visited and events encountered (trial number). When the brain state changed during reward consumption, sharp wave ripples (SPW-Rs) occurred on some trials and their unique spike content most often decoded the trial in which they occurred. In turn, during post-experience sleep, SPW-Rs continued to replay those trials that were reactivated most frequently during awake SPW-Rs. These findings suggest that replay content of awake SPW-Rs provides a tagging mechanism to select aspects of experience that are preserved and consolidated for future use.
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Affiliation(s)
- Wannan Yang
- Center for Neural Science, New York University, NY, USA
- Neuroscience Institute, NYU Grossman School of Medicine, New York University, New York, NY, USA
| | - Chen Sun
- Mila - Quebec AI Institute, Montréal, Canada
| | - Roman Huszár
- Neuroscience Institute, NYU Grossman School of Medicine, New York University, New York, NY, USA
| | - Thomas Hainmueller
- Neuroscience Institute, NYU Grossman School of Medicine, New York University, New York, NY, USA
- Department of Psychiatry, New York University Langone Medical Center, New York, NY, USA
| | - György Buzsáki
- Center for Neural Science, New York University, NY, USA
- Neuroscience Institute, NYU Grossman School of Medicine, New York University, New York, NY, USA
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30
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Lai C, Tanaka S, Harris TD, Lee AK. Volitional activation of remote place representations with a hippocampal brain-machine interface. Science 2023; 382:566-573. [PMID: 37917713 PMCID: PMC10683874 DOI: 10.1126/science.adh5206] [Citation(s) in RCA: 5] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/09/2023] [Accepted: 09/22/2023] [Indexed: 11/04/2023]
Abstract
The hippocampus is critical for recollecting and imagining experiences. This is believed to involve voluntarily drawing from hippocampal memory representations of people, events, and places, including maplike representations of familiar environments. However, whether representations in such "cognitive maps" can be volitionally accessed is unknown. We developed a brain-machine interface to test whether rats can do so by controlling their hippocampal activity in a flexible, goal-directed, and model-based manner. We found that rats can efficiently navigate or direct objects to arbitrary goal locations within a virtual reality arena solely by activating and sustaining appropriate hippocampal representations of remote places. This provides insight into the mechanisms underlying episodic memory recall, mental simulation and planning, and imagination and opens up possibilities for high-level neural prosthetics that use hippocampal representations.
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Affiliation(s)
- Chongxi Lai
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, Virginia, USA
| | - Shinsuke Tanaka
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, Virginia, USA
| | - Timothy D. Harris
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, Virginia, USA
| | - Albert K. Lee
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, Virginia, USA
- Howard Hughes Medical Institute and Department of Neurology, Beth Israel Deaconess Medical Center, Boston, MA, USA
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31
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Dabaghian Y. Grid cells, border cells, and discrete complex analysis. Front Comput Neurosci 2023; 17:1242300. [PMID: 37881247 PMCID: PMC10595009 DOI: 10.3389/fncom.2023.1242300] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/19/2023] [Accepted: 09/22/2023] [Indexed: 10/27/2023] Open
Abstract
We propose a mechanism enabling the appearance of border cells-neurons firing at the boundaries of the navigated enclosures. The approach is based on the recent discovery of discrete complex analysis on a triangular lattice, which allows constructing discrete epitomes of complex-analytic functions and making use of their inherent ability to attain maximal values at the boundaries of generic lattice domains. As it turns out, certain elements of the discrete-complex framework readily appear in the oscillatory models of grid cells. We demonstrate that these models can extend further, producing cells that increase their activity toward the frontiers of the navigated environments. We also construct a network model of neurons with border-bound firing that conforms with the oscillatory models.
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Affiliation(s)
- Yuri Dabaghian
- Department of Neurology, The University of Texas, McGovern Medical Center at Houston, Houston, TX, United States
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32
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Jafarpour A, Lin JJ, Knight RT, Buffalo EA. Multiple memory systems for efficient temporal order memory. Hippocampus 2023; 33:1154-1157. [PMID: 37365860 PMCID: PMC10543450 DOI: 10.1002/hipo.23550] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/15/2022] [Revised: 05/07/2023] [Accepted: 05/09/2023] [Indexed: 06/28/2023]
Abstract
We report distinct contributions of multiple memory systems to the retrieval of the temporal order of events. The neural dynamics related to the retrieval of movie scenes revealed that recalling the temporal order of close events elevates hippocampal theta power, like that observed for recalling close spatial relationships. In contrast, recalling far events increases beta power in the orbitofrontal cortex, reflecting recall based on the overall movie structure.
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Affiliation(s)
- Anna Jafarpour
- University of Washington School of Medicine, Department of Physiology and Biophysics, Seattle, WA, USA
| | - Jack J. Lin
- Department of Neurology and Center for Mind and Brain, University of California, Davis, CA, USA
| | - Robert T. Knight
- Helen Wills Neuroscience Institute, University of California, Berkeley, CA, USA
- Department of Psychology, University of California, Berkeley, CA, USA
| | - Elizabeth A. Buffalo
- University of Washington School of Medicine, Department of Physiology and Biophysics, Seattle, WA, USA
- Washington National Primate Research Center, Seattle, WA, USA
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33
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Dabaghian Y. Grid Cell Percolation. Neural Comput 2023; 35:1609-1626. [PMID: 37523457 DOI: 10.1162/neco_a_01606] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/05/2022] [Accepted: 05/10/2023] [Indexed: 08/02/2023]
Abstract
Grid cells play a principal role in enabling cognitive representations of ambient environments. The key property of these cells-the regular arrangement of their firing fields-is commonly viewed as a means for establishing spatial scales or encoding specific locations. However, using grid cells' spiking outputs for deducing geometric orderliness proves to be a strenuous task due to fairly irregular activation patterns triggered by the animal's sporadic visits to the grid fields. This article addresses statistical mechanisms enabling emergent regularity of grid cell firing activity from the perspective of percolation theory. Using percolation phenomena for modeling the effect of the rat's moves through the lattices of firing fields sheds new light on the mechanisms of spatial information processing, spatial learning, path integration, and establishing spatial metrics. It is also shown that physiological parameters required for spiking percolation match the experimental range, including the characteristic 2/3 ratio between the grid fields' size and the grid spacing, pointing at a biological viability of the approach.
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Affiliation(s)
- Yuri Dabaghian
- Department of Neurology, University of Texas McGovern Medical School, Houston, TX 77030, U.S.A.
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34
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Liu J, Hall AF, Wang DV. Emerging many-to-one weighted mapping in hippocampus-amygdala network underlies memory formation. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2023:2023.09.06.556568. [PMID: 37732176 PMCID: PMC10508749 DOI: 10.1101/2023.09.06.556568] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 09/22/2023]
Abstract
Memories are crucial for our daily lives, yet the network-level organizing principle that governs neural representations of our experiences remains to be determined. Employing dual-site electrophysiology recording in freely behaving mice, we discovered that hippocampal dorsal CA1 (dCA1) and basolateral amygdala (BLA) utilize distinct coding strategies to represent novel experiences. A small assembly of BLA neurons rapidly emerged during memory acquisition and remained active during subsequent consolidation, whereas the majority of dCA1 neurons engaged in the same processes. Machine learning decoding revealed that dCA1 population spikes predicted the BLA assembly firing rate. This suggests that most dCA1 neurons concurrently index an episodic event by rapidly establishing weighted communications with a specific BLA assembly, a process we call "many-to-one weighted mapping." Furthermore, we demonstrated that closed-loop optoinhibition of BLA activity triggered by dCA1 ripples after new learning resulted in impaired memory. These findings highlight a new principle of hippocampus-amygdala communication underlying memory formation and provide new insights into how the brain creates and stores memories.
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Affiliation(s)
- Jun Liu
- Department of Neurobiology & Anatomy, Drexel University College of Medicine, Philadelphia, PA 19129
| | - Arron F Hall
- Department of Neurobiology & Anatomy, Drexel University College of Medicine, Philadelphia, PA 19129
| | - Dong V Wang
- Department of Neurobiology & Anatomy, Drexel University College of Medicine, Philadelphia, PA 19129
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35
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Tanrıverdi B, Cowan ET, Metoki A, Jobson KR, Murty VP, Chein J, Olson IR. Awake Hippocampal-Cortical Co-reactivation Is Associated with Forgetting. J Cogn Neurosci 2023; 35:1446-1462. [PMID: 37348130 PMCID: PMC10759317 DOI: 10.1162/jocn_a_02021] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/24/2023]
Abstract
Systems consolidation theories posit that consolidation occurs primarily through a coordinated communication between hippocampus and neocortex [Moscovitch, M., & Gilboa, A. Systems consolidation, transformation and reorganization: Multiple trace theory, trace transformation theory and their competitors. PsyArXiv, 2021; Kumaran, D., Hassabis, D., & McClelland, J. L. What learning systems do intelligent agents need? Complementary learning systems theory updated. Trends in Cognitive Sciences, 20, 512-534, 2016; McClelland, J. L., & O'Reilly, R. C. Why there are complementary learning systems in the hippocampus and neocortex: Insights from the successes and failures of connectionist models of learning and memory. Psychological Review, 102, 419-457, 1995]. Recent sleep studies in rodents have shown that hippocampus and visual cortex replay the same information at temporal proximity ("co-replay"; Lansink, C. S., Goltstein, P. M., Lankelma, J. V., McNaughton, B. L., & Pennartz, C. M. A. Hippocampus leads ventral striatum in replay of place-reward information. PLoS Biology, 7, e1000173, 2009; Peyrache, A., Khamassi, M., Benchenane, K., Wiener, S. I., & Battaglia, F. P. Replay of rule-learning related neural patterns in the prefrontal cortex during sleep. Nature Neuroscience, 12, 919-926, 2009; Wierzynski, C. M., Lubenov, E. V., Gu, M., & Siapas, A. G. State-dependent spike-timing relationships between hippocampal and prefrontal circuits during sleep. Neuron, 61, 587-596, 2009; Ji, D., & Wilson, M. A. Coordinated memory replay in the visual cortex and hippocampus during sleep. Nature Neuroscience, 10, 100-107, 2007). We developed a novel repetition time (TR)-based co-reactivation analysis method to study hippocampal-cortical co-replays in humans using fMRI. Thirty-six young adults completed an image (face or scene) and location paired associate encoding task in the scanner, which were preceded and followed by resting state scans. We identified post-encoding rest TRs (± 1) that showed neural reactivation of each image-location trials in both hippocampus (HPC) and category-selective cortex (fusiform face area [FFA]). This allowed us to characterize temporally proximal coordinated reactivations ("co-reactivations") between HPC and FFA. Moreover, we found that increased HPC-FFA co-reactivations were associated with incorrectly recognized trials after a 1-week delay (p = .004). Finally, we found that these HPC-FFA co-reactivations were also associated with trials that were initially correctly recognized immediately after encoding but were later forgotten in 1-day (p = .043) and 1-week delay period (p = .031). We discuss these results from a trace transformation perspective [Sekeres, M. J., Winocur, G., & Moscovitch, M. The hippocampus and related neocortical structures in memory transformation. Neuroscience Letters, 680, 39-53, 2018; Winocur, G., & Moscovitch, M. Memory transformation and systems consolidation. Journal of the International Neuropsychological Society, 17, 766-780, 2011] and speculate that HPC-FFA co-reactivations may be integrating related events, at the expense of disrupting event-specific details, hence leading to forgetting.
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36
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Ma G, Jiang R, Wang L, Tang H. Dual memory model for experience-once task-incremental lifelong learning. Neural Netw 2023; 166:174-187. [PMID: 37494763 DOI: 10.1016/j.neunet.2023.07.009] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/01/2022] [Revised: 06/21/2023] [Accepted: 07/07/2023] [Indexed: 07/28/2023]
Abstract
Experience replay (ER) is a widely-adopted neuroscience-inspired method to perform lifelong learning. Nonetheless, existing ER-based approaches consider very coarse memory modules with simple memory and rehearsal mechanisms that cannot fully exploit the potential of memory replay. Evidence from neuroscience has provided fine-grained memory and rehearsal mechanisms, such as the dual-store memory system consisting of PFC-HC circuits. However, the computational abstraction of these processes is still very challenging. To address these problems, we introduce the Dual-Memory (Dual-MEM) model emulating the memorization, consolidation, and rehearsal process in the PFC-HC dual-store memory circuit. Dual-MEM maintains an incrementally updated short-term memory to benefit current-task learning. At the end of the current task, short-term memories will be consolidated into long-term ones for future rehearsal to alleviate forgetting. For the Dual-MEM optimization, we propose two learning policies that emulate different memory retrieval strategies: Direct Retrieval Learning and Mixup Retrieval Learning. Extensive evaluations on eight benchmarks demonstrate that Dual-MEM delivers compelling performance while maintaining high learning and memory utilization efficiencies under the challenging experience-once setting.
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Affiliation(s)
- Gehua Ma
- College of Computer Science and Technology, Zhejiang University, Hangzhou, China
| | - Runhao Jiang
- College of Computer Science and Technology, Zhejiang University, Hangzhou, China
| | - Lang Wang
- Department of Neurology of the First Affiliated Hospital, Interdisciplinary Institute of Neuroscience and Technology, Zhejiang University School of Medicine, Hangzhou, China
| | - Huajin Tang
- College of Computer Science and Technology, Zhejiang University, Hangzhou, China.
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37
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den Bakker H, Van Dijck M, Sun JJ, Kloosterman F. Sharp-wave-ripple-associated activity in the medial prefrontal cortex supports spatial rule switching. Cell Rep 2023; 42:112959. [PMID: 37590137 DOI: 10.1016/j.celrep.2023.112959] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/08/2022] [Revised: 06/22/2023] [Accepted: 07/24/2023] [Indexed: 08/19/2023] Open
Abstract
Previous studies have highlighted an important role for hippocampal sharp-wave ripples in spatial alternation learning, as well as in modulating activity in the medial prefrontal cortex (mPFC). However, the direct influence of hippocampal sharp-wave ripples on mPFC activity during spatial alternation learning has not been investigated. Here, we train Long Evans rats on a three-arm radial maze to perform a sequence of alternations. Three alternation sequences needed to be learned, and while learning a sequence, the activity in the mPFC was inhibited either directly following sharp-wave ripples in the hippocampus (on-time condition) or with a randomized delay (delayed condition). In the on-time condition, the behavioral performance is significantly worse compared to the same animals in the delayed inhibition condition, as measured by a lower correct alternation performance and more perseverative behavior. This indicates that the activity in the mPFC directly following hippocampal sharp-wave ripples is necessary for spatial rule switching.
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Affiliation(s)
- Hanna den Bakker
- Neuro-Electronics Research Flanders, Leuven, Belgium; Brain & Cognition, KU Leuven, Leuven, Belgium
| | - Marie Van Dijck
- Neuro-Electronics Research Flanders, Leuven, Belgium; Department of Chemistry, KU Leuven, Leuven, Belgium
| | - Jyh-Jang Sun
- Neuro-Electronics Research Flanders, Leuven, Belgium
| | - Fabian Kloosterman
- Neuro-Electronics Research Flanders, Leuven, Belgium; Brain & Cognition, KU Leuven, Leuven, Belgium.
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38
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Chaudhuri-Vayalambrone P, Rule ME, Bauza M, Krstulovic M, Kerekes P, Burton S, O'Leary T, Krupic J. Simultaneous representation of multiple time horizons by entorhinal grid cells and CA1 place cells. Cell Rep 2023; 42:112716. [PMID: 37402167 DOI: 10.1016/j.celrep.2023.112716] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/26/2022] [Revised: 04/08/2023] [Accepted: 06/13/2023] [Indexed: 07/06/2023] Open
Abstract
Grid cells and place cells represent the spatiotemporal continuum of an animal's past, present, and future locations. However, their spatiotemporal relationship is unclear. Here, we co-record grid and place cells in freely foraging rats. We show that average time shifts in grid cells tend to be prospective and are proportional to their spatial scale, providing a nearly instantaneous readout of a spectrum of progressively increasing time horizons ranging hundreds of milliseconds. Average time shifts of place cells are generally larger compared to grid cells and also increase with place field sizes. Moreover, time horizons display nonlinear modulation by the animal's trajectories in relation to the local boundaries and locomotion cues. Finally, long and short time horizons occur at different parts of the theta cycle, which may facilitate their readout. Together, these findings suggest that population activity of grid and place cells may represent local trajectories essential for goal-directed navigation and planning.
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Affiliation(s)
| | | | - Marius Bauza
- Sainsbury Wellcome Centre for Neural Circuits and Behavior, University College London, London W1T4JG, UK; Cambridge Phenotyping Limited, London NW1 9ND, UK
| | - Marino Krstulovic
- Department of Physiology, Development and Neuroscience, University of Cambridge, Cambridge CB2 3EG, UK
| | - Pauline Kerekes
- Department of Physiology, Development and Neuroscience, University of Cambridge, Cambridge CB2 3EG, UK
| | - Stephen Burton
- Sainsbury Wellcome Centre for Neural Circuits and Behavior, University College London, London W1T4JG, UK
| | - Timothy O'Leary
- Department of Engineering, University of Cambridge, Cambridge CB2 1PZ, UK
| | - Julija Krupic
- Department of Physiology, Development and Neuroscience, University of Cambridge, Cambridge CB2 3EG, UK; Cambridge Phenotyping Limited, London NW1 9ND, UK.
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39
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Parks DF, Schneider AM, Xu Y, Brunwasser SJ, Funderburk S, Thurber D, Blanche T, Dyer EL, Haussler D, Hengen KB. A non-oscillatory, millisecond-scale embedding of brain state provides insight into behavior. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2023:2023.06.09.544399. [PMID: 37333381 PMCID: PMC10274881 DOI: 10.1101/2023.06.09.544399] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/20/2023]
Abstract
Sleep and wake are understood to be slow, long-lasting processes that span the entire brain. Brain states correlate with many neurophysiological changes, yet the most robust and reliable signature of state is enriched in rhythms between 0.1 and 20 Hz. The possibility that the fundamental unit of brain state could be a reliable structure at the scale of milliseconds and microns has not been addressed due to the physical limits associated with oscillation-based definitions. Here, by analyzing high resolution neural activity recorded in 10 anatomically and functionally diverse regions of the murine brain over 24 h, we reveal a mechanistically distinct embedding of state in the brain. Sleep and wake states can be accurately classified from on the order of 100 to 101 ms of neuronal activity sampled from 100 μm of brain tissue. In contrast to canonical rhythms, this embedding persists above 1,000 Hz. This high frequency embedding is robust to substates and rapid events such as sharp wave ripples and cortical ON/OFF states. To ascertain whether such fast and local structure is meaningful, we leveraged our observation that individual circuits intermittently switch states independently of the rest of the brain. Brief state discontinuities in subsets of circuits correspond with brief behavioral discontinuities during both sleep and wake. Our results suggest that the fundamental unit of state in the brain is consistent with the spatial and temporal scale of neuronal computation, and that this resolution can contribute to an understanding of cognition and behavior.
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Affiliation(s)
- David F. Parks
- Department of Biomolecular Engineering, University of California, Santa Cruz
| | | | - Yifan Xu
- Department of Biology, Washington University in Saint Louis
| | | | | | | | | | - Eva L. Dyer
- Department of Biomedical Engineering, Georgia Tech, Atlanta GA
| | - David Haussler
- Department of Biomolecular Engineering, University of California, Santa Cruz
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40
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Ambrogioni L, Ólafsdóttir HF. Rethinking the hippocampal cognitive map as a meta-learning computational module. Trends Cogn Sci 2023:S1364-6613(23)00128-6. [PMID: 37357064 DOI: 10.1016/j.tics.2023.05.011] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/10/2023] [Revised: 04/26/2023] [Accepted: 05/24/2023] [Indexed: 06/27/2023]
Abstract
A hallmark of biological intelligence is the ability to adaptively draw on past experience to guide behaviour under novel situations. Yet, the neurobiological principles that underlie this form of meta-learning remain relatively unexplored. In this Opinion, we review the existing literature on hippocampal spatial representations and reinforcement learning theory and describe a novel theoretical framework that aims to account for biological meta-learning. We conjecture that so-called hippocampal cognitive maps of familiar environments are part of a larger meta-representation (meta-map) that encodes information states and sources, which support exploration and provides a foundation for learning. We also introduce concrete hypotheses on how these generic states can be encoded using a principle of superposition.
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Affiliation(s)
- Luca Ambrogioni
- Donders Institute for Brain, Cognition & Behaviour, Radboud Universiteit, Nijmegen, The Netherlands.
| | - H Freyja Ólafsdóttir
- Donders Institute for Brain, Cognition & Behaviour, Radboud Universiteit, Nijmegen, The Netherlands.
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41
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Sherrill KR, Molitor RJ, Karagoz AB, Atyam M, Mack ML, Preston AR. Generalization of cognitive maps across space and time. Cereb Cortex 2023; 33:7971-7992. [PMID: 36977625 PMCID: PMC10492577 DOI: 10.1093/cercor/bhad092] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/26/2022] [Revised: 02/24/2023] [Accepted: 02/25/2023] [Indexed: 03/30/2023] Open
Abstract
Prominent theories posit that associative memory structures, known as cognitive maps, support flexible generalization of knowledge across cognitive domains. Here, we evince a representational account of cognitive map flexibility by quantifying how spatial knowledge formed one day was used predictively in a temporal sequence task 24 hours later, biasing both behavior and neural response. Participants learned novel object locations in distinct virtual environments. After learning, hippocampus and ventromedial prefrontal cortex (vmPFC) represented a cognitive map, wherein neural patterns became more similar for same-environment objects and more discriminable for different-environment objects. Twenty-four hours later, participants rated their preference for objects from spatial learning; objects were presented in sequential triplets from either the same or different environments. We found that preference response times were slower when participants transitioned between same- and different-environment triplets. Furthermore, hippocampal spatial map coherence tracked behavioral slowing at the implicit sequence transitions. At transitions, predictive reinstatement of virtual environments decreased in anterior parahippocampal cortex. In the absence of such predictive reinstatement after sequence transitions, hippocampus and vmPFC responses increased, accompanied by hippocampal-vmPFC functional decoupling that predicted individuals' behavioral slowing after a transition. Collectively, these findings reveal how expectations derived from spatial experience generalize to support temporal prediction.
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Affiliation(s)
- Katherine R Sherrill
- Center for Learning and Memory, University of Texas at Austin, Austin, TX 78712, USA
- Department of Neuroscience, University of Texas at Austin, Austin, TX 78712, USA
| | - Robert J Molitor
- Center for Learning and Memory, University of Texas at Austin, Austin, TX 78712, USA
| | - Ata B Karagoz
- Center for Learning and Memory, University of Texas at Austin, Austin, TX 78712, USA
| | - Manasa Atyam
- Center for Learning and Memory, University of Texas at Austin, Austin, TX 78712, USA
| | - Michael L Mack
- Department of Psychology, University of Toronto, Toronto, ON M5G 1E6, Canada
| | - Alison R Preston
- Center for Learning and Memory, University of Texas at Austin, Austin, TX 78712, USA
- Department of Neuroscience, University of Texas at Austin, Austin, TX 78712, USA
- Department of Psychology, University of Texas at Austin, Austin, TX 78712, USA
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42
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Duszkiewicz AJ, Rossato JI, Moreno A, Takeuchi T, Yamasaki M, Genzel L, Spooner P, Canals S, Morris RGM. Execution of new trajectories toward a stable goal without a functional hippocampus. Hippocampus 2023; 33:769-786. [PMID: 36798045 PMCID: PMC10946713 DOI: 10.1002/hipo.23497] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/19/2022] [Revised: 12/06/2022] [Accepted: 12/14/2022] [Indexed: 02/18/2023]
Abstract
The hippocampus is a critical component of a mammalian spatial navigation system, with the firing sequences of hippocampal place cells during sleep or immobility constituting a "replay" of an animal's past trajectories. A novel spatial navigation task recently revealed that such "replay" sequences of place fields can also prospectively map onto imminent new paths to a goal that occupies a stable location during each session. It was hypothesized that such "prospective replay" sequences may play a causal role in goal-directed navigation. In the present study, we query this putative causal role in finding only minimal effects of muscimol-induced inactivation of the dorsal and intermediate hippocampus on the same spatial navigation task. The concentration of muscimol used demonstrably inhibited hippocampal cell firing in vivo and caused a severe deficit in a hippocampal-dependent "episodic-like" spatial memory task in a watermaze. These findings call into question whether "prospective replay" of an imminent and direct path is actually necessary for its execution in certain navigational tasks.
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Affiliation(s)
- Adrian J. Duszkiewicz
- Centre for Discovery Brain Sciences, Edinburgh NeuroscienceUniversity of EdinburghEdinburghUK
- Department of PsychologyUniversity of StirlingStirlingScotlandUK
| | - Janine I. Rossato
- Centre for Discovery Brain Sciences, Edinburgh NeuroscienceUniversity of EdinburghEdinburghUK
- Department of PhysiologyUniversidade Federal do Rio Grande do NorteRio Grande do NorteBrazil
| | - Andrea Moreno
- Centre for Discovery Brain Sciences, Edinburgh NeuroscienceUniversity of EdinburghEdinburghUK
- Instituto de Neurociencias, CSIC‐UMHSan Juan de AlicanteSpain
- Department of Biomedicine, Danish Research Institute of Translational Neuroscience (DANDRITE)Aarhus UniversityAarhus CDenmark
| | - Tomonori Takeuchi
- Centre for Discovery Brain Sciences, Edinburgh NeuroscienceUniversity of EdinburghEdinburghUK
- Department of Biomedicine, Danish Research Institute of Translational Neuroscience (DANDRITE)Aarhus UniversityAarhus CDenmark
| | - Miwako Yamasaki
- Department of Anatomy, Graduate School of MedicineHokkaido UniversitySapporoJapan
| | - Lisa Genzel
- Centre for Discovery Brain Sciences, Edinburgh NeuroscienceUniversity of EdinburghEdinburghUK
- Donders Institute for Brain, Cognition, and BehaviourRadboud University and RadboudumcNijmegenThe Netherlands
| | - Patrick Spooner
- Centre for Discovery Brain Sciences, Edinburgh NeuroscienceUniversity of EdinburghEdinburghUK
| | - Santiago Canals
- Instituto de Neurociencias, CSIC‐UMHSan Juan de AlicanteSpain
| | - Richard G. M. Morris
- Centre for Discovery Brain Sciences, Edinburgh NeuroscienceUniversity of EdinburghEdinburghUK
- Instituto de Neurociencias, CSIC‐UMHSan Juan de AlicanteSpain
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43
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Hahamy A, Dubossarsky H, Behrens TEJ. The human brain reactivates context-specific past information at event boundaries of naturalistic experiences. Nat Neurosci 2023:10.1038/s41593-023-01331-6. [PMID: 37248340 DOI: 10.1038/s41593-023-01331-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/13/2022] [Accepted: 04/13/2023] [Indexed: 05/31/2023]
Abstract
Although we perceive the world in a continuous manner, our experience is partitioned into discrete events. However, to make sense of these events, they must be stitched together into an overarching narrative-a model of unfolding events. It has been proposed that such a stitching process happens in offline neural reactivations when rodents build models of spatial environments. Here we show that, while understanding a natural narrative, humans reactivate neural representations of past events. Similar to offline replay, these reactivations occur in the hippocampus and default mode network, where reactivations are selective to relevant past events. However, these reactivations occur, not during prolonged offline periods, but at the boundaries between ongoing narrative events. These results, replicated across two datasets, suggest reactivations as a candidate mechanism for binding temporally distant information into a coherent understanding of ongoing experience.
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Affiliation(s)
- Avital Hahamy
- Wellcome Trust Centre for Neuroimaging, UCL Queen Square Institute of Neurology, University College London, London, UK.
| | - Haim Dubossarsky
- School of Electronic Engineering and Computer Science, Queen Mary University of London, London, UK
- Language Technology Laboratory, University of Cambridge, Cambridge, UK
| | - Timothy E J Behrens
- Wellcome Trust Centre for Neuroimaging, UCL Queen Square Institute of Neurology, University College London, London, UK
- Wellcome Centre for Integrative Neuroimaging, University of Oxford, John Radcliffe Hospital, Oxford, UK
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44
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Chen L, Lin X, Ye Q, Nenadic Z, Holmes TC, Nitz DA, Xu X. Anatomical organization of temporally correlated neural calcium activity in the hippocampal CA1 region. iScience 2023; 26:106703. [PMID: 37250317 PMCID: PMC10214731 DOI: 10.1016/j.isci.2023.106703] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/24/2021] [Revised: 09/27/2022] [Accepted: 04/15/2023] [Indexed: 05/31/2023] Open
Abstract
Hippocampal CA1 neuronal ensembles generate sequential patterns of firing activity that contribute to episodic memory formation and spatial cognition. Here we used in vivo calcium imaging to record neural ensemble activities in mouse hippocampal CA1 and identified CA1 excitatory neuron sub-populations whose members are active across the same second-long period of time. We identified groups of hippocampal neurons sharing temporally correlated neural calcium activity during behavioral exploration and found that they also organized as clusters in anatomical space. Such clusters vary in membership and activity dynamics with respect to movement in different environments, but also appear during immobility in the dark suggesting an internal dynamic. The strong covariance between dynamics and anatomical location within the CA1 sub-region reveals a previously unrecognized form of topographic representation in hippocampus that may guide generation of hippocampal sequences across time and therefore organize the content of episodic memory.
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Affiliation(s)
- Lujia Chen
- Department of Anatomy and Neurobiology, School of Medicine, University of California, Irvine, Irvine, CA 92697-1275, USA
- Department of Biomedical Engineering, University of California, Irvine, Irvine, CA 92697-2715, USA
- The Center for Neural Circuit Mapping, University of California, Irvine, Irvine, CA 92697, USA
| | - Xiaoxiao Lin
- Department of Anatomy and Neurobiology, School of Medicine, University of California, Irvine, Irvine, CA 92697-1275, USA
- The Center for Neural Circuit Mapping, University of California, Irvine, Irvine, CA 92697, USA
| | - Qiao Ye
- Department of Anatomy and Neurobiology, School of Medicine, University of California, Irvine, Irvine, CA 92697-1275, USA
- Department of Biomedical Engineering, University of California, Irvine, Irvine, CA 92697-2715, USA
- The Center for Neural Circuit Mapping, University of California, Irvine, Irvine, CA 92697, USA
| | - Zoran Nenadic
- Department of Biomedical Engineering, University of California, Irvine, Irvine, CA 92697-2715, USA
- The Center for Neural Circuit Mapping, University of California, Irvine, Irvine, CA 92697, USA
| | - Todd C. Holmes
- Department of Physiology and Biophysics, School of Medicine, University of California, Irvine, Irvine, CA 92697- 4560, USA
- The Center for Neural Circuit Mapping, University of California, Irvine, Irvine, CA 92697, USA
| | - Douglas A. Nitz
- Department of Cognitive Science, University of California, La Jolla, La Jolla, CA 92093, San Diego
- The Center for Neural Circuit Mapping, University of California, Irvine, Irvine, CA 92697, USA
| | - Xiangmin Xu
- Department of Anatomy and Neurobiology, School of Medicine, University of California, Irvine, Irvine, CA 92697-1275, USA
- Department of Biomedical Engineering, University of California, Irvine, Irvine, CA 92697-2715, USA
- Department of Microbiology and Molecular Genetics, University of California, Irvine, Irvine, CA 92697-4025, USA
- Department of Computer Science, University of California, Irvine, Irvine, CA 92697-3435, USA
- The Center for Neural Circuit Mapping, University of California, Irvine, Irvine, CA 92697, USA
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45
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Dabaghian Y. Grid Cells, Border Cells and Discrete Complex Analysis. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2023:2023.05.06.539720. [PMID: 37214803 PMCID: PMC10197584 DOI: 10.1101/2023.05.06.539720] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/24/2023]
Abstract
We propose a mechanism enabling the appearance of border cells-neurons firing at the boundaries of the navigated enclosures. The approach is based on the recent discovery of discrete complex analysis on a triangular lattice, which allows constructing discrete epitomes of complex-analytic functions and making use of their inherent ability to attain maximal values at the boundaries of generic lattice domains. As it turns out, certain elements of the discrete-complex framework readily appear in the oscillatory models of grid cells. We demonstrate that these models can extend further, producing cells that increase their activity towards the frontiers of the navigated environments. We also construct a network model of neurons with border-bound firing that conforms with the oscillatory models.
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Affiliation(s)
- Yuri Dabaghian
- Department of Neurology, The University of Texas McGovern Medical School, 6431 Fannin St, Houston, TX 77030
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46
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Srinivasan A, Riceberg JS, Goodman MR, Srinivasan A, Guise KG, Shapiro ML. Goal Choices Modify Frontotemporal Memory Representations. J Neurosci 2023; 43:3353-3364. [PMID: 36977579 PMCID: PMC10162456 DOI: 10.1523/jneurosci.1939-22.2023] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/14/2022] [Revised: 03/08/2023] [Accepted: 03/13/2023] [Indexed: 03/29/2023] Open
Abstract
Adapting flexibly to changing circumstances is guided by memory of past choices, their outcomes in similar circumstances, and a method for choosing among potential actions. The hippocampus (HPC) is needed to remember episodes, and the prefrontal cortex (PFC) helps guide memory retrieval. Single-unit activity in the HPC and PFC correlates with such cognitive functions. Previous work recorded CA1 and mPFC activity as male rats performed a spatial reversal task in a plus maze that requires both structures, found that PFC activity helps reactivate HPC representations of pending goal choices but did not describe frontotemporal interactions after choices. We describe these interactions after choices here. CA1 activity tracked both current goal location and the past starting location of single trials; PFC activity tracked current goal location better than past start location. CA1 and PFC reciprocally modulated representations of each other both before and after goal choices. After choices, CA1 activity predicted changes in PFC activity in subsequent trials, and the magnitude of this prediction correlated with faster learning. In contrast, PFC start arm activity more strongly modulated CA1 activity after choices correlated with slower learning. Together, the results suggest post-choice HPC activity conveys retrospective signals to the PFC, which combines different paths to common goals into rules. In subsequent trials, prechoice mPFC activity modulates prospective CA1 signals informing goal selection.SIGNIFICANCE STATEMENT HPC and PFC activity supports cognitive flexibility in changing circumstances. HPC signals represent behavioral episodes that link the start, choice, and goal of paths. PFC signals represent rules that guide goal-directed actions. Although prior studies described HPC-PFC interactions preceding decisions in the plus maze, post-decision interactions were not investigated. Here, we show post-choice HPC and PFC activity distinguished the start and goal of paths, and CA1 signaled the past start of each trial more accurately than mPFC. Postchoice CA1 activity modulated subsequent PFC activity, so rewarded actions were more likely to occur. Together, the results show that in changing circumstances, HPC retrospective codes modulate subsequent PFC coding, which in turn modulates HPC prospective codes that predict choices.
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Affiliation(s)
- Aditya Srinivasan
- Department of Neuroscience and Experimental Therapeutics, Albany Medical College, Albany, New York 12208
| | - Justin S Riceberg
- Department of Neuroscience and Experimental Therapeutics, Albany Medical College, Albany, New York 12208
- Department of Psychiatry, Leon and Norma Hess Center for Science and Medicine, Icahn School of Medicine at Mount Sinai, New York, New York 10029
| | - Michael R Goodman
- Department of Neuroscience and Experimental Therapeutics, Albany Medical College, Albany, New York 12208
| | - Arvind Srinivasan
- College of Health Sciences, California Northstate University, Rancho Cordova, California 95670
| | - Kevin G Guise
- Friedman Brain Institute, Leon and Norma Hess Center for Science and Medicine, Icahn School of Medicine at Mount Sinai, New York, New York 10029
| | - Matthew L Shapiro
- Department of Neuroscience and Experimental Therapeutics, Albany Medical College, Albany, New York 12208
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47
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Zhu SL, Lakshminarasimhan KJ, Angelaki DE. Computational cross-species views of the hippocampal formation. Hippocampus 2023; 33:586-599. [PMID: 37038890 PMCID: PMC10947336 DOI: 10.1002/hipo.23535] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/10/2023] [Revised: 03/17/2023] [Accepted: 03/21/2023] [Indexed: 04/12/2023]
Abstract
The discovery of place cells and head direction cells in the hippocampal formation of freely foraging rodents has led to an emphasis of its role in encoding allocentric spatial relationships. In contrast, studies in head-fixed primates have additionally found representations of spatial views. We review recent experiments in freely moving monkeys that expand upon these findings and show that postural variables such as eye/head movements strongly influence neural activity in the hippocampal formation, suggesting that the function of the hippocampus depends on where the animal looks. We interpret these results in the light of recent studies in humans performing challenging navigation tasks which suggest that depending on the context, eye/head movements serve one of two roles-gathering information about the structure of the environment (active sensing) or externalizing the contents of internal beliefs/deliberation (embodied cognition). These findings prompt future experimental investigations into the information carried by signals flowing between the hippocampal formation and the brain regions controlling postural variables, and constitute a basis for updating computational theories of the hippocampal system to accommodate the influence of eye/head movements.
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Affiliation(s)
- Seren L Zhu
- Center for Neural Science, New York University, New York, New York, USA
| | - Kaushik J Lakshminarasimhan
- Center for Theoretical Neuroscience, Zuckerman Mind Brain Behavior Institute, Columbia University, New York, New York, USA
| | - Dora E Angelaki
- Center for Neural Science, New York University, New York, New York, USA
- Mechanical and Aerospace Engineering, Tandon School of Engineering, New York University, New York, New York, USA
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48
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Brodt S, Inostroza M, Niethard N, Born J. Sleep-A brain-state serving systems memory consolidation. Neuron 2023; 111:1050-1075. [PMID: 37023710 DOI: 10.1016/j.neuron.2023.03.005] [Citation(s) in RCA: 49] [Impact Index Per Article: 49.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/12/2023] [Revised: 02/23/2023] [Accepted: 03/06/2023] [Indexed: 04/08/2023]
Abstract
Although long-term memory consolidation is supported by sleep, it is unclear how it differs from that during wakefulness. Our review, focusing on recent advances in the field, identifies the repeated replay of neuronal firing patterns as a basic mechanism triggering consolidation during sleep and wakefulness. During sleep, memory replay occurs during slow-wave sleep (SWS) in hippocampal assemblies together with ripples, thalamic spindles, neocortical slow oscillations, and noradrenergic activity. Here, hippocampal replay likely favors the transformation of hippocampus-dependent episodic memory into schema-like neocortical memory. REM sleep following SWS might balance local synaptic rescaling accompanying memory transformation with a sleep-dependent homeostatic process of global synaptic renormalization. Sleep-dependent memory transformation is intensified during early development despite the immaturity of the hippocampus. Overall, beyond its greater efficacy, sleep consolidation differs from wake consolidation mainly in that it is supported, rather than impaired, by spontaneous hippocampal replay activity possibly gating memory formation in neocortex.
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Affiliation(s)
- Svenja Brodt
- Institute of Medical Psychology and Behavioral Neurobiology, University of Tübingen, Tübingen, Germany; Max-Planck-Institute for Biological Cybernetics, Tübingen, Germany
| | - Marion Inostroza
- Institute of Medical Psychology and Behavioral Neurobiology, University of Tübingen, Tübingen, Germany
| | - Niels Niethard
- Institute of Medical Psychology and Behavioral Neurobiology, University of Tübingen, Tübingen, Germany
| | - Jan Born
- Institute of Medical Psychology and Behavioral Neurobiology, University of Tübingen, Tübingen, Germany; Werner Reichert Center for Integrative Neuroscience, University of Tübingen, Tübingen, Germany.
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49
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McFadyen J, Liu Y, Dolan RJ. Differential replay of reward and punishment paths predicts approach and avoidance. Nat Neurosci 2023; 26:627-637. [PMID: 37020116 DOI: 10.1038/s41593-023-01287-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/17/2021] [Accepted: 02/16/2023] [Indexed: 04/07/2023]
Abstract
Neural replay is implicated in planning, where states relevant to a task goal are rapidly reactivated in sequence. It remains unclear whether, during planning, replay relates to an actual prospective choice. Here, using magnetoencephalography (MEG), we studied replay in human participants while they planned to either approach or avoid an uncertain environment containing paths leading to reward or punishment. We find evidence for forward sequential replay during planning, with rapid state-to-state transitions from 20 to 90 ms. Replay of rewarding paths was boosted, relative to aversive paths, before a decision to avoid and attenuated before a decision to approach. A trial-by-trial bias toward replaying prospective punishing paths predicted irrational decisions to approach riskier environments, an effect more pronounced in participants with higher trait anxiety. The findings indicate a coupling of replay with planned behavior, where replay prioritizes an online representation of a worst-case scenario for approaching or avoiding.
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Affiliation(s)
- Jessica McFadyen
- The UCL Max Planck Centre for Computational Psychiatry and Ageing Research, University College London, London, UK.
- Wellcome Centre for Human Neuroimaging, University College London, London, UK.
| | - Yunzhe Liu
- State Key Laboratory of Cognitive Neuroscience and Learning, IDG/McGovern Institute for Brain Research, Beijing Normal University, Beijing, China
- Chinese Institute for Brain Research, Beijing, China
| | - Raymond J Dolan
- The UCL Max Planck Centre for Computational Psychiatry and Ageing Research, University College London, London, UK
- Wellcome Centre for Human Neuroimaging, University College London, London, UK
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50
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Picard-Deland C, Bernardi G, Genzel L, Dresler M, Schoch SF. Memory reactivations during sleep: a neural basis of dream experiences? Trends Cogn Sci 2023; 27:568-582. [PMID: 36959079 DOI: 10.1016/j.tics.2023.02.006] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/13/2022] [Revised: 02/18/2023] [Accepted: 02/28/2023] [Indexed: 03/25/2023]
Abstract
Newly encoded memory traces are spontaneously reactivated during sleep. Since their discovery in the 1990s, these memory reactivations have been discussed as a potential neural basis for dream experiences. New results from animal and human research, as well as from the rapidly growing field of sleep and dream engineering, provide essential insights into this question, and reveal both strong parallels and disparities between the two phenomena. We suggest that, although memory reactivations may contribute to subjective experiences across different states of consciousness, they are not likely to be the primary neural basis of dreaming. We identify important limitations in current research paradigms and suggest novel strategies to address this question empirically.
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Affiliation(s)
- Claudia Picard-Deland
- Dream and Nightmare Laboratory, Center for Advanced Research in Sleep Medicine, University of Montreal, Montreal, QC, Canada
| | - Giulio Bernardi
- Institutions, Markets, Technologies (IMT) School for Advanced Studies Lucca, Lucca, Italy
| | - Lisa Genzel
- Donders Institute for Brain, Cognition, and Behaviour, Radboud University, Nijmegen, The Netherlands
| | - Martin Dresler
- Donders Institute for Brain, Cognition, and Behaviour, Radboud University Medical Centre, Nijmegen, The Netherlands
| | - Sarah F Schoch
- Donders Institute for Brain, Cognition, and Behaviour, Radboud University Medical Centre, Nijmegen, The Netherlands; Center of Competence Sleep and Health Zurich, University of Zurich, Zurich, Switzerland.
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