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For: Meier-Kolthoff JP, Göker M. TYGS is an automated high-throughput platform for state-of-the-art genome-based taxonomy. Nat Commun 2019;10:2182. [PMID: 31097708 PMCID: PMC6522516 DOI: 10.1038/s41467-019-10210-3] [Citation(s) in RCA: 1506] [Impact Index Per Article: 301.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/17/2018] [Accepted: 04/29/2019] [Indexed: 02/07/2023]  Open
Number Cited by Other Article(s)
1
Barcelo LAF, Lantican NB, Ventura RLG, Ventura JRS. Genetic characterization of biohydrogen-producing purple non-sulfur bacteria Rhodobacter johrii MAY2 isolate via whole genome analysis. Gene 2024;924:148597. [PMID: 38782220 DOI: 10.1016/j.gene.2024.148597] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/03/2024] [Revised: 05/16/2024] [Accepted: 05/20/2024] [Indexed: 05/25/2024]
2
Tang J, Jiang Y, Hu Z, Zhou H, You D, Daroch M. Genomic and phenotypic characterization of Thermosynechococcus-like strains reveals eight species within the genus Thermosynechococcus and a novel genus Parathermosynechococcus gen. nov. Mol Phylogenet Evol 2024;197:108094. [PMID: 38723792 DOI: 10.1016/j.ympev.2024.108094] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/02/2023] [Revised: 04/25/2024] [Accepted: 05/06/2024] [Indexed: 05/13/2024]
3
Lin L, Tao M, He WM, Wu QH, Huang HK, Murero AK, Shao XL, Wang LM, Qian GL. Identification of non-canonical antagonistic bacteria via interspecies contact-dependent killing. PEST MANAGEMENT SCIENCE 2024;80:3997-4005. [PMID: 38527976 DOI: 10.1002/ps.8103] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/31/2023] [Revised: 01/18/2024] [Accepted: 03/26/2024] [Indexed: 03/27/2024]
4
Kumari S, Kumar A, Lepcha A, Kumar R. Cold-adapted Exiguobacterium sibiricum K1 as a potential bioinoculant in cold regions: Physiological and genomic elucidation of biocontrol and plant growth promotion. Gene 2024;916:148439. [PMID: 38583819 DOI: 10.1016/j.gene.2024.148439] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/30/2023] [Revised: 03/22/2024] [Accepted: 04/02/2024] [Indexed: 04/09/2024]
5
Kumar P, Verma A, Yadav P, Das J, Kumar L, Krishnamurthi S. Phylogenomic evaluation of Mangrovimicrobium sediminis gen. nov. sp. nov., the first nitrogen fixing member of the family Halieaceae adapted to mangrove habitat and reclassification of Halioglobus pacificus to Pseudohaliglobus pacificus comb. nov. THE SCIENCE OF THE TOTAL ENVIRONMENT 2024;933:172995. [PMID: 38719044 DOI: 10.1016/j.scitotenv.2024.172995] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/14/2023] [Revised: 04/20/2024] [Accepted: 05/02/2024] [Indexed: 05/19/2024]
6
Lu YT, Wu YY, Li YN, Zheng WY, Liu WZ. Saccharopolyspora mangrovi sp. nov., a novel mangrove soil actinobacterium with distinct metabolic potential revealed by comparative genomic analysis. Arch Microbiol 2024;206:342. [PMID: 38967823 DOI: 10.1007/s00203-024-04069-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/08/2024] [Revised: 06/17/2024] [Accepted: 06/22/2024] [Indexed: 07/06/2024]
7
Alghamdi AK, Parween S, Hirt H, Saad MM. Unraveling the genomic secrets of Tritonibacter mobilis AK171: a plant growth-promoting bacterium isolated from Avicennia marina. BMC Genomics 2024;25:672. [PMID: 38969999 DOI: 10.1186/s12864-024-10555-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/31/2023] [Accepted: 06/24/2024] [Indexed: 07/07/2024]  Open
8
Tan Gana NH, Ruz CP, Alcantara EP, Diaz MGQ, Marfori EC, Villegas LC, Creencia AR, Arguelles EDLR, Tan Gana NH, Monsalud RG, Opulencia RB. Genome drafts of Pseudogracilibacillus spp. from soil and sediment of Mount Makiling, a dormant volcano in the Philippines. Microbiol Resour Announc 2024:e0037424. [PMID: 38967465 DOI: 10.1128/mra.00374-24] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/10/2024] [Accepted: 06/19/2024] [Indexed: 07/06/2024]  Open
9
Aldeia C, Campos-Madueno EI, Endimiani A. Genomic insights into Leminorella grimontii and its chromosomal class A GRI β-lactamase. Eur J Clin Microbiol Infect Dis 2024:10.1007/s10096-024-04888-7. [PMID: 38958811 DOI: 10.1007/s10096-024-04888-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/23/2024] [Accepted: 06/25/2024] [Indexed: 07/04/2024]
10
Samadpour M, Benoit L, Myoda S, Hans B, Nadala C, Kim SH, Themeli E, Cantera R, Nguyen T, Richter H. Microbiological survey and genomic analysis of Cronobacter sakazakii strains isolated from US households and retail foods. Appl Environ Microbiol 2024:e0070024. [PMID: 38953659 DOI: 10.1128/aem.00700-24] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/09/2024] [Accepted: 06/12/2024] [Indexed: 07/04/2024]  Open
11
Schäfer L, Jehle JA, Kleespies RG, Wennmann JT. Pathogens of the oak processionary moth Thaumetopoea processionea: Developing a user-friendly bioassay system and metagenome analyses for microorganisms. J Invertebr Pathol 2024;205:108121. [PMID: 38705355 DOI: 10.1016/j.jip.2024.108121] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/24/2023] [Revised: 02/05/2024] [Accepted: 04/26/2024] [Indexed: 05/07/2024]
12
Behrendt U, Burghard V, Wende S, Ulrich K, Wolf J, Neumann-Schaal M, Ulrich A. Schauerella fraxinea gen. nov., sp. nov., a bacterial species that colonises ash trees tolerant to dieback caused by Hymenoscyphus fraxineus. Syst Appl Microbiol 2024;47:126516. [PMID: 38772267 DOI: 10.1016/j.syapm.2024.126516] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/31/2024] [Revised: 05/06/2024] [Accepted: 05/08/2024] [Indexed: 05/23/2024]
13
Grabner F M, Grabner H M, Schein H, Schrank A, Töglhofer M, Weidenholzer E, Rückert-Reed C, Busche T, Buchebner-Jance M. Lacticaseibacillus parahuelsenbergensis sp. nov., Lacticaseibacillus styriensis sp. nov. and Lacticaseibacillus zeae subsp. silagei subsp. nov., isolated from different grass and corn silage. Int J Syst Evol Microbiol 2024;74. [PMID: 38954457 DOI: 10.1099/ijsem.0.006441] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 07/04/2024]  Open
14
Saticioglu IB, Ay H, Altun S, Ajmi N, Gunduz ES, Gocmen H, Duman M. Comprehensive genome analysis of five novel flavobacteria: Flavobacterium piscisymbiosum sp. nov., Flavobacterium pisciphilum sp. nov., Flavobacterium flavipigmentatum sp. nov., Flavobacterium lipolyticum sp. nov. and Flavobacterium cupriresistens sp. nov. Syst Appl Microbiol 2024;47:126518. [PMID: 38761464 DOI: 10.1016/j.syapm.2024.126518] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/11/2023] [Revised: 05/10/2024] [Accepted: 05/13/2024] [Indexed: 05/20/2024]
15
Velasquez MR, De Lay BD, Edmondson DG, Wormser GP, Norris SJ, Cafferky K, Munzer E, Rizk CC, Keller M. A Novel Treponema pallidum Subspecies pallidum Strain Associated With a Painful Oral Lesion Is a Member of a Potentially Emerging Nichols-Related Subgroup. Sex Transm Dis 2024;51:486-492. [PMID: 38829929 DOI: 10.1097/olq.0000000000001971] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/05/2024]
16
Bing H, Qi C, Gu J, Zhao T, Yu X, Cai Y, Zhang Y, Li A, Wang X, Zhao J, Xiang W. Isolation and identification of NEAU-CP5: A seed-endophytic strain of B. velezensis that controls tomato bacterial wilt. Microb Pathog 2024;192:106707. [PMID: 38777241 DOI: 10.1016/j.micpath.2024.106707] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/30/2023] [Revised: 04/29/2024] [Accepted: 05/19/2024] [Indexed: 05/25/2024]
17
Ercole TG, Kava VM, Petters-Vandresen DAL, Ribeiro RA, Hungria M, Galli LV. Unveiling Agricultural Biotechnological Prospects: The Draft Genome Sequence of Stenotrophomonas geniculata LGMB417. Curr Microbiol 2024;81:247. [PMID: 38951210 DOI: 10.1007/s00284-024-03784-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/19/2024] [Accepted: 06/22/2024] [Indexed: 07/03/2024]
18
Łopucki R, Stępień-Pyśniak D, Christensen H, Kubiński K, Lenarczyk E, Martinez-de-Tejada G, Kitowski I, Masłyk M. Interspecies transmission of antimicrobial-resistant bacteria between wild birds and mammals in urban environment. Vet Microbiol 2024;294:110130. [PMID: 38820727 DOI: 10.1016/j.vetmic.2024.110130] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/11/2024] [Revised: 05/18/2024] [Accepted: 05/23/2024] [Indexed: 06/02/2024]
19
Kosmopoulos JC, Batstone-Doyle RT, Heath KD. Co-inoculation with novel nodule-inhabiting bacteria reduces the benefits of legume-rhizobium symbiosis. Can J Microbiol 2024;70:275-288. [PMID: 38507780 DOI: 10.1139/cjm-2023-0209] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/22/2024]
20
Klages LJ, Kaup O, Busche T, Kalinowski J, Rückert-Reed C. Classification of a novel Serratia species, isolated from a wound swab in North Rhine-Westphalia: Proposal of Serratia sarumanii sp. nov. Syst Appl Microbiol 2024;47:126527. [PMID: 38959748 DOI: 10.1016/j.syapm.2024.126527] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/11/2024] [Revised: 05/08/2024] [Accepted: 06/27/2024] [Indexed: 07/05/2024]
21
Maw ZA, Grunwald AL, Haltli BA, Cartmell C, Kerr RG. Discovery of the Lipopeptides Albubactins A-H from Streptomyces albidoflavus RKJM0023 via Chemical Elicitation with Rhamnolipids and Synthesis of Albubactin A. JOURNAL OF NATURAL PRODUCTS 2024. [PMID: 38940698 DOI: 10.1021/acs.jnatprod.3c01234] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/29/2024]
22
Burcham ZM. Comparative genomic analysis of an emerging Pseudomonadaceae member, Thiopseudomonas alkaliphila. Microbiol Spectr 2024:e0415723. [PMID: 38934605 DOI: 10.1128/spectrum.04157-23] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/12/2023] [Accepted: 06/11/2024] [Indexed: 06/28/2024]  Open
23
Embarcadero-Jiménez S, Araujo-Palomares CL, Moreno-Perlín T, Ramírez-Álvarez N, Quezada-Hernández C, Batista-García RA, Sanchez-Flores A, Calcáneo-Hernández G, Silva-Jiménez H. Physiology and comparative genomics of the haloalkalitolerant and hydrocarbonoclastic marine strain Rhodococcus ruber MSA14. Arch Microbiol 2024;206:328. [PMID: 38935150 DOI: 10.1007/s00203-024-04050-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/05/2024] [Revised: 06/07/2024] [Accepted: 06/12/2024] [Indexed: 06/28/2024]
24
Borker SS, Sharma P, Thakur A, Kumar A, Kumar A, Kumar R. Physiological and genomic insights into a psychrotrophic drought-tolerant bacterial consortium for crop improvement in cold, semiarid regions. Microbiol Res 2024;286:127818. [PMID: 38970906 DOI: 10.1016/j.micres.2024.127818] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/11/2024] [Revised: 06/12/2024] [Accepted: 06/20/2024] [Indexed: 07/08/2024]
25
Zhang W, Zheng L, Xie J, Su X, Zhang M, Huang H, Schmitz-Esser S, Du S, Yang Y, Xie J, Zhang Q, Yu S, Guo Q, Wang H, Zhang L, Yang K, Hou R. The giant panda gut harbors a high diversity of lactic acid bacteria revealed by a novel culturomics pipeline. mSystems 2024:e0052024. [PMID: 38920380 DOI: 10.1128/msystems.00520-24] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/10/2024] [Accepted: 05/21/2024] [Indexed: 06/27/2024]  Open
26
Zeng J, Iizaka Y, Hamada M, Iwai A, Takeuchi R, Fukumoto A, Tamura T, Anzai Y. Actinoplanes kirromycinicus sp. nov., isolated from soil. J Antibiot (Tokyo) 2024:10.1038/s41429-024-00756-w. [PMID: 38926493 DOI: 10.1038/s41429-024-00756-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/08/2024] [Revised: 05/22/2024] [Accepted: 06/03/2024] [Indexed: 06/28/2024]
27
Mahmoud FM, Pritsch K, Siani R, Benning S, Radl V, Kublik S, Bunk B, Spröer C, Schloter M. Comparative genomic analysis of strain Priestia megaterium B1 reveals conserved potential for adaptation to endophytism and plant growth promotion. Microbiol Spectr 2024:e0042224. [PMID: 38916310 DOI: 10.1128/spectrum.00422-24] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/21/2024] [Accepted: 05/17/2024] [Indexed: 06/26/2024]  Open
28
Millán-López S, Zurita-Artaloitia JM, Silva-Jiménez H, Pardo-López L, Sanchez-Flores A. Genomic sequence of three hydrocarbonoclastic pseudomonadaceae strains isolated from marine sediments of the port of Rosarito, Baja California, Mexico. Microbiol Resour Announc 2024:e0033524. [PMID: 38916305 DOI: 10.1128/mra.00335-24] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/02/2024] [Accepted: 05/24/2024] [Indexed: 06/26/2024]  Open
29
Dao VHT, Nguyen LT, Tran PMT, Nguyen TX, Le HHT, Dinh ST. Whole-genome sequence of Micrococcus sp. strain HOU01 isolated from potato root. Microbiol Resour Announc 2024:e0026824. [PMID: 38916298 DOI: 10.1128/mra.00268-24] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/19/2024] [Accepted: 06/03/2024] [Indexed: 06/26/2024]  Open
30
Wang S, Yuan C, Xu C, Li D, Zhang H, Wang J, Wang X, Li Y, Jiao D, Yuan S, Chen H, Qiu D. Denitrificimonas halotolerans sp. nov., a novel species isolated from UASB sludge treating landfill leachate. Antonie Van Leeuwenhoek 2024;117:91. [PMID: 38907751 DOI: 10.1007/s10482-024-01987-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/29/2024] [Accepted: 05/30/2024] [Indexed: 06/24/2024]
31
Tomita S, Nakai R, Kuroda K, Kurashita H, Hatamoto M, Yamaguchi T, Narihiro T. Corallococcus caeni sp. nov., a novel myxobacterium isolated from activated sludge. Arch Microbiol 2024;206:317. [PMID: 38904779 DOI: 10.1007/s00203-024-04037-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/22/2024] [Revised: 06/07/2024] [Accepted: 06/08/2024] [Indexed: 06/22/2024]
32
Zang M, Ma ZH, Xu YL, Long XF. Taxonomic identification, phenol biodegradation and soil remediation of the strain Rhodococcus sacchari sp. nov. Z13T. Arch Microbiol 2024;206:313. [PMID: 38900186 DOI: 10.1007/s00203-024-04048-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/26/2024] [Revised: 06/08/2024] [Accepted: 06/12/2024] [Indexed: 06/21/2024]
33
Du Y, Han W, Hao P, Hu Y, Hu T, Zeng Y. A Genomics-Based Discovery of Secondary Metabolite Biosynthetic Gene Clusters in the Potential Novel Strain Streptomyces sp. 21So2-11 Isolated from Antarctic Soil. Microorganisms 2024;12:1228. [PMID: 38930610 PMCID: PMC11205464 DOI: 10.3390/microorganisms12061228] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/01/2024] [Revised: 06/15/2024] [Accepted: 06/17/2024] [Indexed: 06/28/2024]  Open
34
Sukpanoa S, Kaewkla O, Suriyachadkun C, Papayrata C, Klankeo P, Franco CMM. Streptomyces mahasarakhamensis sp. nov., an Endophytic Actinobacterium Isolated from Jasmine Rice and its Potential as plant Growth Promoter. Curr Microbiol 2024;81:223. [PMID: 38874598 DOI: 10.1007/s00284-024-03747-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/14/2023] [Accepted: 05/19/2024] [Indexed: 06/15/2024]
35
Malfent F, Zehl M, Kirkegaard RH, Oberhofer M, Zotchev SB. Genomes and secondary metabolomes of Streptomyces spp. isolated from Leontopodium nivale ssp. alpinum. Front Microbiol 2024;15:1408479. [PMID: 38946903 PMCID: PMC11212599 DOI: 10.3389/fmicb.2024.1408479] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/28/2024] [Accepted: 05/13/2024] [Indexed: 07/02/2024]  Open
36
Wang X, Pan H, Zhou H, Feng Z, Li A, Guan X. Draft genome of Pseudomonas sp. XK-1, a marine bacterium capable of degrading lignin and Mn(II) oxidation. Microbiol Resour Announc 2024:e0041124. [PMID: 38864618 DOI: 10.1128/mra.00411-24] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/18/2024] [Accepted: 05/17/2024] [Indexed: 06/13/2024]  Open
37
Cea-Torrescassana E, Howard TP, Stach J, Montero-Calasanz MDC. Whole-genome sequence of the plant-associated bacterium Pseudomonas granadensis CT364 isolated in Seville, Spain. Microbiol Resour Announc 2024;13:e0073523. [PMID: 38682778 DOI: 10.1128/mra.00735-23] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/25/2023] [Accepted: 04/15/2024] [Indexed: 05/01/2024]  Open
38
Kundlacz C, Aldeia C, Eddoubaji Y, Campos-Madueno EI, Endimiani A. Complete genome sequence of Pseudomonas canadensis strain Pcan-CK-23 isolated from Zophobas morio larvae. Microbiol Resour Announc 2024;13:e0002324. [PMID: 38682776 DOI: 10.1128/mra.00023-24] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/09/2024] [Accepted: 04/15/2024] [Indexed: 05/01/2024]  Open
39
Ramzan R, Ali A, Farooq M, Ali H, Khaliq S, Rashid MH. Draft genome sequence of extracellular enzyme-producing Bacillus paralicheniformis strain NBG-07. Microbiol Resour Announc 2024:e0009624. [PMID: 38860803 DOI: 10.1128/mra.00096-24] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/03/2024] [Accepted: 05/16/2024] [Indexed: 06/12/2024]  Open
40
Attéré SA, Piché LC, Intertaglia L, Lami R, Charette SJ, Vincent AT. Complete sequences of two Paenibacillus sp. strains and one Lysinibacillus strain isolated from the environment on STAA medium highlight biotechnological potential. Microbiol Resour Announc 2024;13:e0019924. [PMID: 38682917 DOI: 10.1128/mra.00199-24] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/28/2024] [Accepted: 04/09/2024] [Indexed: 05/01/2024]  Open
41
Tanaka T, Okano K, Iwaki H. Complete genome sequence of Paraburkholderia terrae strain KU-46, a 2,4-dinitrophenol-degrading bacterium. Microbiol Resour Announc 2024;13:e0028224. [PMID: 38700342 DOI: 10.1128/mra.00282-24] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/21/2024] [Accepted: 04/23/2024] [Indexed: 05/05/2024]  Open
42
Dai M, Xu Y, Zhao L, Wu M, Ma H, Zhu L, Li W, Li X, Sun B. Caproicibacter sp. BJN0012, a potential new species isolated from cellar mud for caproic acid production from glucose. J Biotechnol 2024;388:11-23. [PMID: 38614441 DOI: 10.1016/j.jbiotec.2024.04.005] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/29/2023] [Revised: 04/08/2024] [Accepted: 04/09/2024] [Indexed: 04/15/2024]
43
Ercole TG, Kava VM, Petters-Vandresen DAL, Nassif Gomes ME, Aluizio R, Ribeiro RA, Hungria M, Galli LV. Unlocking the growth-promoting and antagonistic power: A comprehensive whole genome study on Bacillus velezensis strains. Gene 2024;927:148669. [PMID: 38866259 DOI: 10.1016/j.gene.2024.148669] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/29/2024] [Revised: 05/14/2024] [Accepted: 06/06/2024] [Indexed: 06/14/2024]
44
Pal S, Yuvaraj R, Krishnan H, Venkatraman B, Abraham J, Gopinathan A. Unraveling radiation resistance strategies in two bacterial strains from the high background radiation area of Chavara-Neendakara: A comprehensive whole genome analysis. PLoS One 2024;19:e0304810. [PMID: 38857267 PMCID: PMC11164402 DOI: 10.1371/journal.pone.0304810] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/23/2023] [Accepted: 05/18/2024] [Indexed: 06/12/2024]  Open
45
Stoll DA, Grimmler C, Hetzer B, Masoura A, Kulling SE, Huch M. Bosea rubneri sp. nov. Isolated from Organically Grown Allium cepa. Curr Microbiol 2024;81:212. [PMID: 38839619 PMCID: PMC11153308 DOI: 10.1007/s00284-024-03717-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/30/2023] [Accepted: 04/25/2024] [Indexed: 06/07/2024]
46
Qiu X, Ye K, Ma Y, Zhao Q, Wang L, Yang J. Genome sequence-based species classification of Enterobacter cloacae complex: a study among clinical isolates. Microbiol Spectr 2024;12:e0431223. [PMID: 38687068 DOI: 10.1128/spectrum.04312-23] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/28/2023] [Accepted: 04/13/2024] [Indexed: 05/02/2024]  Open
47
Steyaert S, Peeters C, Wieme AD, Muyldermans A, Vandoorslaer K, Spilker T, Wybo I, Piérard D, LiPuma JJ, Vandamme P. Novel Ralstonia species from human infections: improved matrix-assisted laser desorption/ionization time-of-flight mass spectrometry-based identification and analysis of antimicrobial resistance patterns. Microbiol Spectr 2024;12:e0402123. [PMID: 38661349 DOI: 10.1128/spectrum.04021-23] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/28/2023] [Accepted: 03/13/2024] [Indexed: 04/26/2024]  Open
48
Stegman N, Steiling M, Jackson B, Sedano C, Putonti C. Draft genome assembly of Lactobacillus johnsonii UMB3423 from a voided urine sample. Microbiol Resour Announc 2024:e0033324. [PMID: 38832771 DOI: 10.1128/mra.00333-24] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/30/2024] [Accepted: 05/02/2024] [Indexed: 06/05/2024]  Open
49
Petakh P, Oksenych V, Khovpey Y, Kamyshnyi O. Comprehensive Analysis of Antiphage Defense Mechanisms: Serovar-Specific Patterns. Antibiotics (Basel) 2024;13:522. [PMID: 38927188 PMCID: PMC11201134 DOI: 10.3390/antibiotics13060522] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/05/2024] [Revised: 05/30/2024] [Accepted: 06/01/2024] [Indexed: 06/28/2024]  Open
50
Yasawong M, Songngamsuk T, Phatcharaharikarn M, Sriyapai P, Silprasit K, Ngamniyom A, Sriyapai T. Draft genome sequence data of multidrug-resistant Pseudomonas aeruginosa WO7 from a hospital wastewater treatment plant in Thailand. Data Brief 2024;54:110344. [PMID: 38586145 PMCID: PMC10997946 DOI: 10.1016/j.dib.2024.110344] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/24/2024] [Revised: 03/12/2024] [Accepted: 03/13/2024] [Indexed: 04/09/2024]  Open
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