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Trivedi M, Arekar K, Manu S, Kuderna LFK, Rogers J, Farh KK, Bonet TM, Umapathy G. Historical Demography and Species Distribution Models Shed Light on Speciation in Primates of Northeast India. Ecol Evol 2025; 15:e70968. [PMID: 40008062 PMCID: PMC11850985 DOI: 10.1002/ece3.70968] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/17/2024] [Revised: 01/21/2025] [Accepted: 01/22/2025] [Indexed: 02/27/2025] Open
Abstract
Past climate change is one of the important factors influencing primate speciation. Populations of various species could have risen or declined in response to these climatic fluctuations. Northeast India harbors a rich diversity of primates, where such fluctuations can be implicated. Recent advances in climate modeling as well as genomic data analysis has paved the way for understanding how species accumulate at a particular geographic region. We utilized these methods to explore the primate diversity in this unique region in relation to past climate change. To ascertain the population level changes, we inferred the demographic history of nine species of primates found in Northeast India and compared it with species distribution models of Pliocene and Pleistocene period. Through this study, we are able to provide a detailed picture of how past climatic changes have resulted in the present species diversity and this mixture of species have either originated in the region or have dispersed from mainland Southeast Asia. We observe that effective population size has decreased for all the species, but distributions are different for all the four genera: Macaca, Trachypithecus, Hoolock and Nycticebus. It also gives an idea about how each species is affected differently by climate change, and why it should be given emphasis in framing species-wise conservation models for future climate change.
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Affiliation(s)
- Mihir Trivedi
- Laboratory for the Conservation of Endangered SpeciesCSIR‐Centre for Cellular and Molecular BiologyHyderabadIndia
| | - Kunal Arekar
- Centre for Ecological SciencesIndian Institute of ScienceBangaloreIndia
| | - Shivakumara Manu
- Laboratory for the Conservation of Endangered SpeciesCSIR‐Centre for Cellular and Molecular BiologyHyderabadIndia
- Academy of Scientific and Innovative Research (AcSIR)GhaziabadIndia
| | | | - Jeffrey Rogers
- Department of Molecular and Human Genetics, Human Genome Sequencing CenterBaylor College of MedicineHoustonTexasUSA
| | | | - Tomas Marques Bonet
- Institute of Evolutionary Biology (UPF‐CSIC), PRBBBarcelonaSpain
- Institució Catalana de Recerca i Estudis Avançats (ICREA) and Universitat Pompeu FabraBarcelonaSpain
| | - Govindhaswamy Umapathy
- Laboratory for the Conservation of Endangered SpeciesCSIR‐Centre for Cellular and Molecular BiologyHyderabadIndia
- Academy of Scientific and Innovative Research (AcSIR)GhaziabadIndia
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2
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Vishwakarma R, Sgarlata GM, Soriano-Paños D, Rasteiro R, Maié T, Paixão T, Tournebize R, Chikhi L. Species-Specific Traits Shape Genetic Diversity During an Expansion-Contraction Cycle and Bias Demographic History Reconstruction. Mol Ecol 2025; 34:e17597. [PMID: 39663680 DOI: 10.1111/mec.17597] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/12/2024] [Revised: 10/04/2024] [Accepted: 10/22/2024] [Indexed: 12/13/2024]
Abstract
Species ranges are dynamic, experiencing expansions, contractions or shifts in response to habitat changes driven by extrinsic factors such as climate change or human activities. While existing research examines the genetic consequences of spatial processes, few studies integrate species-specific traits to analyse how habitat changes affect co-existing species. In this study, we address this gap by investigating how genetic diversity patterns vary among species with different traits (such as generation length, population density and dispersal) experiencing similar habitat changes. Using spatial simulations and a simpler panmictic population model, we investigate the temporal genetic diversity in refugium populations undergoing range expansion of their habitat, followed by stationary and contraction periods. By varying habitat contraction speed and species traits, we identified three distinct temporal dynamics of genetic diversity during contraction: (i) a decrease in genetic diversity, (ii) an initial increase followed by a decrease and (iii) a continuous increase throughout the contraction period. We show that genetic diversity trajectories during population decline can be predicted by comparing sampled population diversity to equilibrium values expected under expanded and contracted habitat ranges. Our study also challenges the belief that high genetic diversity in a refugium population is due to a recent and rapid habitat loss. Instead, we found contrasting effects of contraction speed on genetic diversity depending on the interaction between species-specific traits and the dynamics of habitat change. Finally, using simulated genetic data, we found that demographic histories inferred from effective population size estimates may vary across species, even when they experience similar habitat changes.
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Affiliation(s)
| | - Gabriele Maria Sgarlata
- Instituto Gulbenkian de Ciência, Oeiras, Portugal
- Department of Evolution and Ecology and Center for Population Biology, University of California, Davis, California, USA
| | - David Soriano-Paños
- Instituto Gulbenkian de Ciência, Oeiras, Portugal
- Universitat Rovira i Virgili, Tarragona, Spain
| | - Rita Rasteiro
- Instituto Gulbenkian de Ciência, Oeiras, Portugal
- MRC Integrative Epidemiology Unit, University of Bristol, Bristol, UK
| | - Tiago Maié
- Instituto Gulbenkian de Ciência, Oeiras, Portugal
- Institute for Computational Genomics, RWTH Aachen University, Aachen, Germany
| | - Tiago Paixão
- Instituto Gulbenkian de Ciência, Oeiras, Portugal
| | - Rémi Tournebize
- Centre de Recherche Sur la Biodiversité et l'Environnement, UMR 5300, CNRS, IRD, UPS, Université de Toulouse Midi-Pyrénées, Toulouse, France
- DIADE, IRD, Université de Montpellier, Montpellier, France
| | - Lounès Chikhi
- Instituto Gulbenkian de Ciência, Oeiras, Portugal
- Centre de Recherche Sur la Biodiversité et l'Environnement, UMR 5300, CNRS, IRD, UPS, Université de Toulouse Midi-Pyrénées, Toulouse, France
- Centre for Ecology, Evolution and Environmental Changes (cE3c), Faculdade de Ciências da Universidade de Lisboa, Campo Grande, Lisboa, Portugal
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3
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Urban MC. Climate change extinctions. Science 2024; 386:1123-1128. [PMID: 39636977 DOI: 10.1126/science.adp4461] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/26/2024] [Accepted: 10/28/2024] [Indexed: 12/07/2024]
Abstract
Climate change is expected to cause irreversible changes to biodiversity, but predicting those risks remains uncertain. I synthesized 485 studies and more than 5 million projections to produce a quantitative global assessment of climate change extinctions. With increased certainty, this meta-analysis suggests that extinctions will accelerate rapidly if global temperatures exceed 1.5°C. The highest-emission scenario would threaten approximately one-third of species, globally. Amphibians; species from mountain, island, and freshwater ecosystems; and species inhabiting South America, Australia, and New Zealand face the greatest threats. In line with predictions, climate change has contributed to an increasing proportion of observed global extinctions since 1970. Besides limiting greenhouse gases, pinpointing which species to protect first will be critical for preserving biodiversity until anthropogenic climate change is halted and reversed.
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Affiliation(s)
- Mark C Urban
- Department of Ecology and Evolutionary Biology, University of Connecticut, Storrs, CT, USA
- Center of Biological Risk, University of Connecticut, Storrs, CT, USA
- School of Biological Sciences, University of Aberdeen, Aberdeen, UK
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4
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Edmonds D, Andriantsimanarilafy RR, Crottini A, Dreslik MJ, Newton-Youens J, Ramahefason A, Randrianantoandro CJ, Andreone F. Small population size and possible extirpation of the threatened Malagasy poison frog Mantella cowanii. PeerJ 2024; 12:e17947. [PMID: 39301061 PMCID: PMC11412227 DOI: 10.7717/peerj.17947] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/12/2024] [Accepted: 07/30/2024] [Indexed: 09/22/2024] Open
Abstract
Amphibians are experiencing severe population declines, requiring targeted conservation action for the most threatened species and habitats. Unfortunately, we do not know the basic demographic traits of most species, which hinders population recovery efforts. We studied one of Madagascar's most threatened frog species, the harlequin mantella (Mantella cowanii), to confirm it is still present at historic localities and estimate annual survival and population sizes. We surveyed eleven of all thirteen known localities and were able to detect the species at eight. Using a naïve estimate of detection probability from sites with confirmed presence, we estimated 1.54 surveys (95% CI [1.10-2.37]) are needed to infer absence with 95% confidence, suggesting the three populations where we did not detect M. cowanii are now extirpated. However, we also report two new populations for the first time. Repeated annual surveys at three sites showed population sizes ranged from 13-137 adults over 3-8 years, with the most intensively surveyed site experiencing a >80% reduction in population size during 2015-2023. Annual adult survival was moderately high (0.529-0.618) and we recaptured five individuals in 2022 and one in 2023 first captured as adults in 2015, revealing the maximum lifespan of the species in nature can reach 9 years and beyond. Our results confirm M. cowanii is characterized by a slower life history pace than other Mantella species, putting it at greater extinction risk. Illegal collection for the international pet trade and continued habitat degradation are the main threats to the species. We recommend conservation efforts continue monitoring M. cowanii populations and reassess the International Union for Conservation of Nature (IUCN) Red List status because the species may be Critically Endangered rather than Endangered based on population size and trends.
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Affiliation(s)
- Devin Edmonds
- Department of Natural Resources and Environmental Sciences, University of Illinois at Urbana-Champaign, Champaign, IL, United States
- Illinois Natural History Survey, Prairie Research Institute, University of Illinois at Urbana-Champaign, Champaign, IL, United States
| | | | - Angelica Crottini
- Departamento de Biologia, Faculdade de Ciências, Universidade do Porto, Porto, Portugal
- CIBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, Vairão, Portugal
- BIOPOLIS Program in Genomics, Biodiversity and Land Planning, CIBIO, Campus de Vairão, Vairão, Portugal
| | - Michael J Dreslik
- Department of Natural Resources and Environmental Sciences, University of Illinois at Urbana-Champaign, Champaign, IL, United States
- Illinois Natural History Survey, Prairie Research Institute, University of Illinois at Urbana-Champaign, Champaign, IL, United States
| | - Jade Newton-Youens
- Department of Natural Sciences, The Manchester Metropolitan University, Manchester, United Kingdom
| | - Andoniana Ramahefason
- Mention Zoologie et Biodiversité Animale, Université d'Antananarivo, Antananarivo, Madagascar
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Mouquet N, Langlois J, Casajus N, Auber A, Flandrin U, Guilhaumon F, Loiseau N, McLean M, Receveur A, Stuart Smith RD, Mouillot D. Low human interest for the most at-risk reef fishes worldwide. SCIENCE ADVANCES 2024; 10:eadj9510. [PMID: 39018399 PMCID: PMC466977 DOI: 10.1126/sciadv.adj9510] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/25/2023] [Accepted: 06/18/2024] [Indexed: 07/19/2024]
Abstract
Human interest in biodiversity is essential for effective conservation action but remains poorly quantified at large scales. Here, we investigated human interest for 2408 marine reef fishes using data obtained from online public databases and social media, summarized in two synthetic dimensions, research effort and public attention. Both dimensions are mainly related to geographic range size. Research effort is also linked to fishery importance, while public attention is more related to fish aesthetic value and aquarium trade importance. We also found a strong phylogenetic bias, with certain fish families receiving disproportional research effort and public attention. Most concerningly, species at the highest risk of extinction and those most vulnerable to future climate change tend to receive less research effort and public attention. Our results provide a lens through which examining the societal attention that species garner, with the ultimate goals to improve conservation strategies, research programs, and communication plans.
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Affiliation(s)
- Nicolas Mouquet
- MARBEC, Univ Montpellier, CNRS, Ifremer, IRD, Montpellier, France
- FRB-CESAB, 34000 Montpellier, France
| | | | | | - Arnaud Auber
- IFREMER, Unité Halieutique Manche Mer du Nord, Laboratoire Ressources Halieutiques, Boulogne-sur-Mer, France
| | - Ulysse Flandrin
- MARBEC, Univ Montpellier, CNRS, Ifremer, IRD, Montpellier, France
| | | | - Nicolas Loiseau
- MARBEC, Univ Montpellier, CNRS, Ifremer, IRD, Montpellier, France
| | - Matthew McLean
- Department of Biology and Marine Biology, University of North Carolina at Wilmington, Wilmington, NC 28403. USA
| | | | - Rick D. Stuart Smith
- Institute for Marine and Antarctic Studies, University of Tasmania, Hobart, Tasmania, Australia
| | - David Mouillot
- MARBEC, Univ Montpellier, CNRS, Ifremer, IRD, Montpellier, France
- Institut Universitaire de France, 1 rue Descartes, Paris, France
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6
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Duan H, Yu X. Spatial and temporal changes in shorebird habitats under different land use scenarios along the Yellow and Bohai Sea coasts in China. THE SCIENCE OF THE TOTAL ENVIRONMENT 2024; 929:172443. [PMID: 38649051 DOI: 10.1016/j.scitotenv.2024.172443] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/04/2024] [Revised: 03/27/2024] [Accepted: 04/10/2024] [Indexed: 04/25/2024]
Abstract
The effect of coastal wetland loss on shorebird habitat in recent years has been widely reported in previous studies. Various coastal wetland conservation and restoration measures have been implemented or will soon be implemented in China. The extent to which these measures will affect the area and structure of coastal wetland habitat in the future remains unclear. Here, we predicted changes in habitat area and structure for 39 common shorebird species along the coasts of the Yellow and Bohai Seas using a cellular automata-Markov (CA-Markov) land use scenario model and a maximum entropy species distribution model, along with terrain factors (slope, aspect, and digital evaluation model) and climate factors (temperature and precipitation) from the Data Centre for Resources and Environmental Sciences at the Chinese Academy of Sciences, land cover maps interpreted using the human-computer interactive method, and citizen science data of shorebird occurrences derived from eBird, Global Biodiversity Information Facility, and Bird Report. We found that shorebird habitat was most abundant along the coasts of Bohai Bay, Laizhou Bay, and Yancheng. The area of habitat decreased and became increasingly fragmented between 2000 and 2020 for more than half of the 39 species. Under the future business-as-usual scenario, the area of shorebird habitat decreased from 2020 to 2050, and the remaining habitat became increasingly fragmented. Under the ecological protection (EP) scenario, habitat loss was mitigated, and habitat connectivity was improved. The area of habitat was lower in 2050 under the EP scenario than in 2000 for most species, especially threatened species, suggesting that the area of habitat will not return to year-2000 levels under the EP scenario. These results emphasize the need to protect remaining shorebird habitats and implement ecological conservation measures to ensure the long-term preservation of coastal wetlands.
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Affiliation(s)
- Houlang Duan
- Key Laboratory of Ecosystem Network Observation and Modelling, Institute of Geographic Sciences and Natural Resources Research, Chinese Academy of Sciences, Beijing 100101, China; College of Resources and Environment, University of Chinese Academy of Sciences, Beijing 100190, China.
| | - Xiubo Yu
- Key Laboratory of Ecosystem Network Observation and Modelling, Institute of Geographic Sciences and Natural Resources Research, Chinese Academy of Sciences, Beijing 100101, China; College of Resources and Environment, University of Chinese Academy of Sciences, Beijing 100190, China
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7
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Han Q, Li M, Keeffe G. Can large-scale tree planting in China compensate for the loss of climate connectivity due to deforestation? THE SCIENCE OF THE TOTAL ENVIRONMENT 2024; 927:172350. [PMID: 38608907 DOI: 10.1016/j.scitotenv.2024.172350] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/12/2024] [Revised: 04/01/2024] [Accepted: 04/08/2024] [Indexed: 04/14/2024]
Abstract
Extensive deforestation has been a major reason for the loss of forest connectivity, impeding species range shifts under current climate change. Over the past decades, the Chinese government launched a series of afforestation and reforestation projects to increase forest cover, yet whether the new forests can compensate for the loss of connectivity due to deforestation-and where future tree planting would be most effective-remains largely unknown. Here, we evaluate changes in climate connectivity across China's forests between 2015 and 2019. We find that China's large-scale tree planting alleviated the negative impacts of forest loss on climate connectivity, improving the extent and probability of climate connectivity by 0-0.2 °C and 0-0.03, respectively. The improvements were particularly obvious for species with short dispersal distances (i.e., 3 km and 10 km). Nevertheless, only ~55 % of the trees planted in this period could serve as stepping stones for species movement. This indicates that focusing solely on the quantitative target of forest coverage without considering the connectivity of forests may miss opportunities in tree planting to facilitate climate-induced range shifts. More attention should be paid to the spatial arrangement of tree plantations and their potential as stepping stones. We then identify priority areas for future tree planting to create effective stepping stones. Our study highlights the potential of large-scale tree planting to facilitate range shifts. Future tree-planting efforts should incorporate the need for species range shifts to achieve more biodiversity conservation benefits under climate change.
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Affiliation(s)
- Qiyao Han
- Department of Landscape Architecture, Nanjing Agricultural University, China.
| | - Ming Li
- Institute of Geodesy and Photogrammetry, ETH Zurich, Switzerland
| | - Greg Keeffe
- School of Natural and Built Environment, Queen's University Belfast, UK
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8
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Cheng EMY, Cheng CML, Choo J, Yan Y, Carrasco LR. Biodiversity footprints of 151 popular dishes from around the world. PLoS One 2024; 19:e0296492. [PMID: 38381742 PMCID: PMC10880993 DOI: 10.1371/journal.pone.0296492] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/27/2023] [Accepted: 12/14/2023] [Indexed: 02/23/2024] Open
Abstract
Habitat loss for food production is a key threat to global biodiversity. Despite the importance of dietary choices on our capacity to mitigate the on-going biodiversity crisis, unlike with specific ingredients or products, consumers have limited information on the biodiversity implications of choosing to eat a certain popular dish. Here we estimated the biodiversity footprints of 151 popular local dishes from around the world when globally and locally produced and after calorical content standardization. We find that specific ingredients (beef, legumes, rice) encroaching on biodiversity hotspots with already very high agricultural pressure (e.g. India) lead to high biodiversity footprint in the dishes. Examples of high-biodiversity-footprint popular dishes were beef dishes such as fraldinha (beef cut dish) originating from Brazil and legume dishes such as chana masala (chickpea curry) from India. Regardless of assuming locally or globally produced, feedlot or pasture livestock production, vegan and vegetarian dishes presented lower biodiversity footprints than dishes containing meat. Our results demonstrate the feasibility of analysing biodiversity footprint at the dish level across multiple countries, making sustainable eating decisions more accessible to consumers.
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Affiliation(s)
- Elissa M. Y. Cheng
- Department of Biological Sciences, National University of Singapore, Singapore, Singapore
| | - Carina M. L. Cheng
- Department of Statistics and Data Science, National University of Singapore, Singapore, Singapore
| | - Jacqueline Choo
- Department of Biological Sciences, National University of Singapore, Singapore, Singapore
| | - Yanyun Yan
- Department of Biological Sciences, National University of Singapore, Singapore, Singapore
| | - Luis Roman Carrasco
- Department of Biological Sciences, National University of Singapore, Singapore, Singapore
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9
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Broekman MJE, Hilbers JP, Tucker MA, Huijbregts MAJ, Schipper AM. Impacts of existing and planned roads on terrestrial mammal habitat in New Guinea. CONSERVATION BIOLOGY : THE JOURNAL OF THE SOCIETY FOR CONSERVATION BIOLOGY 2024; 38:e14152. [PMID: 37551763 DOI: 10.1111/cobi.14152] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/22/2022] [Revised: 04/26/2023] [Accepted: 07/03/2023] [Indexed: 08/09/2023]
Abstract
New Guinea is one of the last regions in the world with vast pristine areas and is home to many endemic species. However, extensive road development plans threaten the island's biodiversity. We quantified habitat fragmentation due to existing and planned roads for 139 terrestrial mammal species in New Guinea. For each species, we calculated the equivalent connected area (ECA) of habitat, a metric that takes into account the area and connectivity of habitat patches in 3 situations: no roads (baseline situation), existing roads (current), and existing and planned roads combined (future). We assessed the effect of roads as the proportion of the ECA remaining in the current and future situations relative to the baseline. To examine whether there were patterns in these relative ECA values, we fitted beta-regression models relating these values to 4 species characteristics: taxonomic order, body mass, diet, and International Union for the Conservation of Nature Red List status. On average across species, current ECA was 89% (SD 12) of baseline ECA. Shawmayer's coccymys (Coccymys shawmayeri) had the lowest amount of current ECA relative to the baseline (53%). In the future situation, the average remaining ECA was 71% (SD 20) of baseline ECA. Future remaining ECA was below 50% of the baseline for 28 species. The montane soft-furred paramelomys (Paramelomys mollis) had the lowest future ECA relative to the baseline (36%). In general, currently nonthreatened carnivorous species with a large body mass had the greatest reductions of ECA in the future situation. In conclusion, future road development plans imply extensive additional habitat fragmentation for a large number of terrestrial mammal species in New Guinea. It is therefore important to limit the impact of planned roads, for example, by reconsidering the location of planned roads that intersect habitat of the most threatened species, or by the implementation of mitigation measures such as underpasses.
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Affiliation(s)
- Maarten J E Broekman
- Department of Environmental Science, Radboud Institute for Biological and Environmental Sciences, Radboud University, Nijmegen, The Netherlands
| | - Jelle P Hilbers
- Department of Environmental Science, Radboud Institute for Biological and Environmental Sciences, Radboud University, Nijmegen, The Netherlands
| | - Marlee A Tucker
- Department of Environmental Science, Radboud Institute for Biological and Environmental Sciences, Radboud University, Nijmegen, The Netherlands
| | - Mark A J Huijbregts
- Department of Environmental Science, Radboud Institute for Biological and Environmental Sciences, Radboud University, Nijmegen, The Netherlands
| | - Aafke M Schipper
- Department of Environmental Science, Radboud Institute for Biological and Environmental Sciences, Radboud University, Nijmegen, The Netherlands
- PBL Netherlands Environmental Assessment Agency, The Hague, The Netherlands
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10
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Hernandez JO, Naeem M, Zaman W. How Does Changing Environment Influence Plant Seed Movements as Populations of Dispersal Vectors Decline? PLANTS (BASEL, SWITZERLAND) 2023; 12:1462. [PMID: 37050088 PMCID: PMC10097094 DOI: 10.3390/plants12071462] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 01/16/2023] [Revised: 03/22/2023] [Accepted: 03/23/2023] [Indexed: 06/19/2023]
Abstract
Plants differ widely in their ability to find tolerable climatic ranges through seed dispersal, depending on their life-history traits and habitat characteristics. Following the Preferred Reporting Items for Systematic Reviews and Meta-Analyses (PRISMA) guidelines, a systematic review on seed dispersal mechanisms was conducted to elucidate plant seed movements amid changing environments. Here, the highest relative count of studies was found in Spain (16.47%), followed by Brazil (14.12%), and the USA (14.12%). The megadiverse, hotspot countries (e.g., Philippines, Vietnam, Myanmar, India, and Indonesia) and Africa (Tanzania, South Africa, Democratic Republic of the Congo) have very low to no data about the reviewed topic. The effects of land use changes, habitat degradation/disturbances, climate, and extreme weather conditions on seed dispersal mechanisms and agents had the highest share of studies across topics and countries. Plant diversity and distribution of anemochorous, endozoochorous, epizoochorous, hydrochorous, myrmecochorous, and ornithochorous species are seriously affected by changing environments due to altered long-distance seed dispersal. The fruit types commonly associated with endozoochory and ornithochory are species with achene, capsule, drupe, fleshy, and nut fruits/seeds, whereas achene, capsule, samara/winged seeds are associated with anemochory. The present review provides a summary of evidence on how plants are affected by climate change as populations of dispersal vectors decline. Finally, recommendations for further study were made based on the identified knowledge gaps.
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Affiliation(s)
- Jonathan O. Hernandez
- Department of Forest Biological Sciences, College of Forestry and Natural Resources, University of the Philippines Los Baños, Los Baños 4031, Laguna, Philippines
| | - Muhammad Naeem
- Department of Plant Science, School of Agriculture and Biology, Shanghai Jiao Tong University, 800 Dongchuan Road, Shanghai 200240, China
| | - Wajid Zaman
- Department of Life Sciences, Yeungnam University, Gyeongsan 38541, Republic of Korea
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11
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Robinson J, Kyriazis CC, Yuan SC, Lohmueller KE. Deleterious Variation in Natural Populations and Implications for Conservation Genetics. Annu Rev Anim Biosci 2023; 11:93-114. [PMID: 36332644 PMCID: PMC9933137 DOI: 10.1146/annurev-animal-080522-093311] [Citation(s) in RCA: 44] [Impact Index Per Article: 22.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Abstract
Deleterious mutations decrease reproductive fitness and are ubiquitous in genomes. Given that many organisms face ongoing threats of extinction, there is interest in elucidating the impact of deleterious variation on extinction risk and optimizing management strategies accounting for such mutations. Quantifying deleterious variation and understanding the effects of population history on deleterious variation are complex endeavors because we do not know the strength of selection acting on each mutation. Further, the effect of demographic history on deleterious mutations depends on the strength of selection against the mutation and the degree of dominance. Here we clarify how deleterious variation can be quantified and studied in natural populations. We then discuss how different demographic factors, such as small population size, nonequilibrium population size changes, inbreeding, and gene flow, affect deleterious variation. Lastly, we provide guidance on studying deleterious variation in nonmodel populations of conservation concern.
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Affiliation(s)
- Jacqueline Robinson
- Institute for Human Genetics, University of California, San Francisco, California, USA;
| | - Christopher C Kyriazis
- Department of Ecology and Evolutionary Biology, University of California, Los Angeles, California, USA; , ,
| | - Stella C Yuan
- Department of Ecology and Evolutionary Biology, University of California, Los Angeles, California, USA; , ,
| | - Kirk E Lohmueller
- Department of Ecology and Evolutionary Biology, University of California, Los Angeles, California, USA; , , .,Department of Human Genetics, David Geffen School of Medicine, University of California, Los Angeles, California, USA
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12
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Mendez Angarita VY, Maiorano L, Dragonetti C, Di Marco M. Implications of exceeding the Paris Agreement for mammalian biodiversity. CONSERVATION SCIENCE AND PRACTICE 2023. [DOI: 10.1111/csp2.12889] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/09/2023] Open
Affiliation(s)
| | - Luigi Maiorano
- Department of Biology and Biotechnologies “Charles Darwin” Sapienza University of Rome Italy
| | - Chiara Dragonetti
- Department of Biology and Biotechnologies “Charles Darwin” Sapienza University of Rome Italy
| | - Moreno Di Marco
- Department of Biology and Biotechnologies “Charles Darwin” Sapienza University of Rome Italy
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13
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Fleiss S, Parr CL, Platts PJ, McClean CJ, Beyer RM, King H, Lucey JM, Hill JK. Implications of zero-deforestation palm oil for tropical grassy and dry forest biodiversity. Nat Ecol Evol 2023; 7:250-263. [PMID: 36443467 DOI: 10.1038/s41559-022-01941-6] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/14/2021] [Accepted: 10/17/2022] [Indexed: 11/30/2022]
Abstract
Many companies have made zero-deforestation commitments (ZDCs) to reduce carbon emissions and biodiversity losses linked to tropical commodities. However, ZDCs conserve areas primarily based on tree cover and aboveground carbon, potentially leading to the unintended consequence that agricultural expansion could be encouraged in biomes outside tropical rainforest, which also support important biodiversity. We examine locations suitable for zero-deforestation expansion of commercial oil palm, which is increasingly expanding outside the tropical rainforest biome, by generating empirical models of global suitability for rainfed and irrigated oil palm. We find that tropical grassy and dry forest biomes contain >50% of the total area of land climatically suitable for rainfed oil palm expansion in compliance with ZDCs (following the High Carbon Stock Approach; in locations outside urban areas and cropland), and that irrigation could double the area suitable for expansion in these biomes. Within these biomes, ZDCs fail to protect areas of high vertebrate richness from oil palm expansion. To prevent unintended consequences of ZDCs and minimize the environmental impacts of oil palm expansion, policies and governance for sustainable development and conservation must expand focus from rainforests to all tropical biomes.
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Affiliation(s)
- Susannah Fleiss
- Leverhulme Centre for Anthropocene Biodiversity, Department of Biology, University of York, York, UK.
| | - Catherine L Parr
- School of Environmental Sciences, University of Liverpool, Liverpool, UK
- Department of Zoology & Entomology, University of Pretoria, Pretoria, South Africa
- School of Animal, Plant and Environmental Sciences, University of the Witwatersrand, Johannesburg, South Africa
| | - Philip J Platts
- Leverhulme Centre for Anthropocene Biodiversity, Department of Biology, University of York, York, UK
- BeZero Carbon Ltd, London, UK
- Department of Environment and Geography, University of York, York, UK
- Climate Change Specialist Group, Species Survival Commission, International Union for Conservation of Nature, Gland, Switzerland
| | - Colin J McClean
- Department of Environment and Geography, University of York, York, UK
| | - Robert M Beyer
- Department of Zoology, University of Cambridge, Cambridge, UK
- Potsdam Institute for Climate Impact Research (PIK), Member of the Leibniz Association, Potsdam, Germany
| | - Henry King
- Safety and Environmental Assurance Centre, Unilever R&D, Sharnbrook, UK
| | | | - Jane K Hill
- Leverhulme Centre for Anthropocene Biodiversity, Department of Biology, University of York, York, UK
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14
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Asamoah EF, Di Marco M, Watson JEM, Beaumont LJ, Venter O, Maina JM. Land-use and climate risk assessment for Earth's remaining wilderness. Curr Biol 2022; 32:4890-4899.e4. [PMID: 36323323 DOI: 10.1016/j.cub.2022.10.016] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/26/2022] [Revised: 08/23/2022] [Accepted: 10/05/2022] [Indexed: 11/23/2022]
Abstract
Earth's wilderness areas are reservoirs of genetic information and carbon storage systems, and are vital to reducing extinction risks. Retaining the conservation value of these areas is fundamental to achieving global biodiversity conservation goals; however, climate and land-use risk can undermine their ability to provide these functions. The extent to which wilderness areas are likely to be impacted by these drivers has not previously been quantified. Using climate and land-use change during baseline (1971-2005) and future (2016-2050) periods, we estimate that these stressors within wilderness areas will increase by ca. 60% and 39%, respectively, under a scenario of high emission and land-use change (SSP5-RCP8.5). Nearly half (49%) of all wilderness areas could experience substantial climate change by 2050 under this scenario, potentially limiting their capacity to shelter biodiversity. Notable climate (>5 km year-1) and land-use (>0.25 km year-1) changes are expected to occur more rapidly in the unprotected wilderness, including the edges of the Amazonian wilderness, Northern Russia, and Central Africa, which support unique assemblages of species and are critical for the preservation of biodiversity. However, an alternative scenario of sustainable development (SSP1-RCP2.6) would attenuate the projected climate velocity and land-use instability by 54% and 6%, respectively. Mitigating greenhouse gas emissions and preserving the remaining intact natural ecosystems can help fortify these bastions of biodiversity.
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Affiliation(s)
- Ernest F Asamoah
- School of Natural Sciences, Macquarie University, North Ryde, 2109 Sydney, NSW, Australia.
| | - Moreno Di Marco
- Department of Biology and Biotechnologies, Sapienza University of Rome, 00185 Rome, Italy
| | - James E M Watson
- School of Earth and Environmental Sciences, The University of Queensland, St Lucia 4072, QLD, Australia; Centre for Biodiversity and Conservation Science, The University of Queensland, St Lucia 4072, QLD, Australia
| | - Linda J Beaumont
- School of Natural Sciences, Macquarie University, North Ryde, 2109 Sydney, NSW, Australia
| | - Oscar Venter
- Natural Resource and Environmental Studies Institute, University of Northern British Columbia, Prince George, BC, Canada
| | - Joseph M Maina
- School of Natural Sciences, Macquarie University, North Ryde, 2109 Sydney, NSW, Australia.
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15
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Broekman MJE, Hilbers JP, Schipper AM, Benítez‐López A, Santini L, Huijbregts MAJ. Time-lagged effects of habitat fragmentation on terrestrial mammals in Madagascar. CONSERVATION BIOLOGY : THE JOURNAL OF THE SOCIETY FOR CONSERVATION BIOLOGY 2022; 36:e13942. [PMID: 35603483 PMCID: PMC9826438 DOI: 10.1111/cobi.13942] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/11/2021] [Revised: 02/22/2022] [Accepted: 03/14/2022] [Indexed: 05/10/2023]
Abstract
Biodiversity is severely threatened by habitat destruction. As a consequence of habitat destruction, the remaining habitat becomes more fragmented. This results in time-lagged population extirpations in remaining fragments when these are too small to support populations in the long term. If these time-lagged effects are ignored, the long-term impacts of habitat loss and fragmentation will be underestimated. We quantified the magnitude of time-lagged effects of habitat fragmentation for 157 nonvolant terrestrial mammal species in Madagascar, one of the biodiversity hotspots with the highest rates of habitat loss and fragmentation. We refined species' geographic ranges based on habitat preferences and elevation limits and then estimated which habitat fragments were too small to support a population for at least 100 years given stochastic population fluctuations. We also evaluated whether time-lagged effects would change the threat status of species according to the International Union for the Conservation of Nature (IUCN) Red List assessment framework. We used allometric relationships to obtain the population parameters required to simulate the population dynamics of each species, and we quantified the consequences of uncertainty in these parameter estimates by repeating the analyses with a range of plausible parameter values. Based on the median outcomes, we found that for 34 species (22% of the 157 species) at least 10% of their current habitat contained unviable populations. Eight species (5%) had a higher threat status when accounting for time-lagged effects. Based on 0.95-quantile values, following a precautionary principle, for 108 species (69%) at least 10% of their habitat contained unviable populations, and 51 species (32%) had a higher threat status. Our results highlight the need to preserve continuous habitat and improve connectivity between habitat fragments. Moreover, our findings may help to identify species for which time-lagged effects are most severe and which may thus benefit the most from conservation actions.
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Affiliation(s)
- Maarten J. E. Broekman
- Department of Environmental Science, Radboud Institute for Biological and Environmental Sciences, Faculty of ScienceRadboud UniversityNijmegenThe Netherlands
| | - Jelle P. Hilbers
- Department of Environmental Science, Radboud Institute for Biological and Environmental Sciences, Faculty of ScienceRadboud UniversityNijmegenThe Netherlands
| | - Aafke M. Schipper
- Department of Environmental Science, Radboud Institute for Biological and Environmental Sciences, Faculty of ScienceRadboud UniversityNijmegenThe Netherlands
- PBL Netherlands Environmental Assessment AgencyThe HagueThe Netherlands
| | - Ana Benítez‐López
- Integrative Ecology Group, Estación Biológica de Doñana (EBD‐CSIC)SevillaSpain
| | - Luca Santini
- Department of Biology and Biotechnologies “Charles Darwin”Sapienza University of RomeRomeItaly
- National Research Council, Institute of Research on Terrestrial Ecosystems (CNR‐IRET)RomeItaly
| | - Mark A. J. Huijbregts
- Department of Environmental Science, Radboud Institute for Biological and Environmental Sciences, Faculty of ScienceRadboud UniversityNijmegenThe Netherlands
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16
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Zhu B, Verhoeven MA, Velasco N, Sanchez‐Aguilar L, Zhang Z, Piersma T. Current breeding distributions and predicted range shifts under climate change in two subspecies of Black-tailed Godwits in Asia. GLOBAL CHANGE BIOLOGY 2022; 28:5416-5426. [PMID: 35716047 PMCID: PMC9544271 DOI: 10.1111/gcb.16308] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/15/2022] [Revised: 06/08/2022] [Accepted: 06/11/2022] [Indexed: 06/06/2023]
Abstract
Habitat loss and shifts associated with climate change threaten global biodiversity, with impacts likely to be most pronounced at high latitudes. With the disappearance of the tundra breeding habitats, migratory shorebirds that breed at these high latitudes are likely to be even more vulnerable to climate change than those in temperate regions. We examined this idea using new distributional information on two subspecies of Black-tailed Godwits Limosa limosa in Asia: the northerly, bog-breeding L. l. bohaii and the more southerly, steppe-breeding L. l. melanuroides. Based on breeding locations of tagged and molecularly assayed birds, we modelled the current breeding distributions of the two subspecies with species distribution models, tested those models for robustness and then used them to predict climatically suitable breeding ranges in 2070 according to bioclimatic variables and different climate change scenarios. Our models were robust and showed that climate change is expected to push bohaii into the northern rim of the Eurasian continent. Melanuroides is also expected to shift northward, stopping in the Yablonovyy and Stanovoy Ranges, and breeding elevation is expected to increase. Climatically suitable breeding habitat ranges would shrink to 16% and 11% of the currently estimated ranges of bohaii and melanuroides, respectively. Overall, this study provides the first predictions for the future distributions of two little-known Black-tailed Godwit subspecies and highlights the importance of factoring in shifts in bird distribution when designing climate-proof conservation strategies.
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Affiliation(s)
- Bing‐Run Zhu
- Conservation Ecology Group, Groningen Institute for Evolutionary Life SciencesUniversity of GroningenGroningenNetherlands
- Key Laboratory for Biodiversity Science and Ecological Engineering, College of Life SciencesBeijing Normal UniversityBeijingChina
- Hunan Global Messenger Technology Co., Ltd. HunanChangshaChina
| | - Mo A. Verhoeven
- Netherlands Institute of Ecology (NIOO‐KNAW)WageningenNetherlands
- RSPB Centre for Conservation Science, The LodgeSandyUK
- Department of Coastal SystemsNIOZ Royal Netherlands Institute for Sea ResearchDen BurgThe Netherlands
| | - Nicolas Velasco
- Conservation Ecology Group, Groningen Institute for Evolutionary Life SciencesUniversity of GroningenGroningenNetherlands
- Departamento de Ciencias Ecológicas, Instituto de Ecología y BiodiversidadFacultad de Ciencias, Universidad de ChileSantiagoChile
| | - Lisa Sanchez‐Aguilar
- Conservation Ecology Group, Groningen Institute for Evolutionary Life SciencesUniversity of GroningenGroningenNetherlands
- Facultad de ArtesUniversidad de Costa RicaSan JoséCosta Rica
| | - Zhengwang Zhang
- Key Laboratory for Biodiversity Science and Ecological Engineering, College of Life SciencesBeijing Normal UniversityBeijingChina
| | - Theunis Piersma
- Conservation Ecology Group, Groningen Institute for Evolutionary Life SciencesUniversity of GroningenGroningenNetherlands
- Department of Coastal SystemsNIOZ Royal Netherlands Institute for Sea ResearchDen BurgThe Netherlands
- CEAAF Centre for East Asian‐Australasian Flyway StudiesBeijing Forestry UniversityBeijingChina
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17
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Carlson CJ, Albery GF, Merow C, Trisos CH, Zipfel CM, Eskew EA, Olival KJ, Ross N, Bansal S. Climate change increases cross-species viral transmission risk. Nature 2022; 607:555-562. [PMID: 35483403 DOI: 10.1038/s41586-022-04788-w] [Citation(s) in RCA: 303] [Impact Index Per Article: 101.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/24/2020] [Accepted: 04/21/2022] [Indexed: 11/09/2022]
Abstract
At least 10,000 virus species have the ability to infect humans but, at present, the vast majority are circulating silently in wild mammals1,2. However, changes in climate and land use will lead to opportunities for viral sharing among previously geographically isolated species of wildlife3,4. In some cases, this will facilitate zoonotic spillover-a mechanistic link between global environmental change and disease emergence. Here we simulate potential hotspots of future viral sharing, using a phylogeographical model of the mammal-virus network, and projections of geographical range shifts for 3,139 mammal species under climate-change and land-use scenarios for the year 2070. We predict that species will aggregate in new combinations at high elevations, in biodiversity hotspots, and in areas of high human population density in Asia and Africa, causing the cross-species transmission of their associated viruses an estimated 4,000 times. Owing to their unique dispersal ability, bats account for the majority of novel viral sharing and are likely to share viruses along evolutionary pathways that will facilitate future emergence in humans. Notably, we find that this ecological transition may already be underway, and holding warming under 2 °C within the twenty-first century will not reduce future viral sharing. Our findings highlight an urgent need to pair viral surveillance and discovery efforts with biodiversity surveys tracking the range shifts of species, especially in tropical regions that contain the most zoonoses and are experiencing rapid warming.
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Affiliation(s)
- Colin J Carlson
- Department of Biology, Georgetown University, Washington, DC, USA. .,Center for Global Health Science & Security, Georgetown University, Washington, DC, USA.
| | - Gregory F Albery
- Department of Biology, Georgetown University, Washington, DC, USA. .,EcoHealth Alliance, New York, NY, USA.
| | - Cory Merow
- Eversource Energy Center, University of Connecticut, Storrs, CT, USA
| | - Christopher H Trisos
- African Climate and Development Initiative, University of Cape Town, Cape Town, South Africa
| | - Casey M Zipfel
- Department of Biology, Georgetown University, Washington, DC, USA
| | - Evan A Eskew
- EcoHealth Alliance, New York, NY, USA.,Department of Biology, Pacific Lutheran University, Tacoma, WA, USA
| | | | - Noam Ross
- EcoHealth Alliance, New York, NY, USA
| | - Shweta Bansal
- Department of Biology, Georgetown University, Washington, DC, USA
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18
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Hulme PE. Importance of greater interdisciplinarity and geographic scope when tackling the driving forces behind biological invasions. CONSERVATION BIOLOGY : THE JOURNAL OF THE SOCIETY FOR CONSERVATION BIOLOGY 2022; 36:e13817. [PMID: 34405453 DOI: 10.1111/cobi.13817] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/17/2020] [Revised: 07/29/2021] [Accepted: 07/30/2021] [Indexed: 06/13/2023]
Abstract
Invasive non-native species are important drivers of ecosystem change, yet the driving forces of biological invasions themselves are poorly understood. Such information is essential to ensure policies focus on the most relevant drivers, and that future scenarios capture the full range of potential outcomes for invasive non-native species. I carried out a bibliometric analysis of articles published from 2000 to 2020 that address either invasive non-native species or biodiversity and ecosystem services and that also mention 1 or more drivers of ecosystem change. I examined 5 indirect drivers (demographic, economic, governance, sociocultural, and technological) and 6 direct drivers (climate change, invasive non-native species, land-use or sea-use change, natural hazards, pollution, and resource extraction). Using the Web of Science core collection of citation indexes, I undertook searches of article titles and keywords and retrieved 27,462 articles addressing invasive non-native species and 110,087 articles dealing with biodiversity or ecosystem services. Most research to date on biological invasions as well as on biodiversity and ecosystem services has focused on anthropogenic direct drivers of ecosystem change rather than indirect drivers. Yet currently, less than 18% of articles addressing biological invasions examined drivers of ecosystem change, a similar level to that found over 20 years ago for biodiversity or ecosystem services. Knowledge of the drivers of biological invasions is limited, emphasizes tractable drivers over those that require an interdisciplinary approach, and is biased toward developed economies. Drivers generally deemed important for biological invasions, such as governance and resource extraction, accounted for less than 2% of research effort. The absence of a systematic understanding of the forces that drive invasive non-native species and how they interact means that attempts to mitigate or forecast biological invasions are likely to fail. To address biological invasions requires a much better orientation of national and international research on drivers in relation to both their actual importance as well as their policy relevance.
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Affiliation(s)
- Philip E Hulme
- Bio-Protection Research Centre, Lincoln University, Canterbury, New Zealand
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19
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Virkkala R, Leikola N, Kujala H, Kivinen S, Hurskainen P, Kuusela S, Valkama J, Heikkinen RK. Developing fine-grained nationwide predictions of valuable forests using biodiversity indicator bird species. ECOLOGICAL APPLICATIONS : A PUBLICATION OF THE ECOLOGICAL SOCIETY OF AMERICA 2022; 32:e2505. [PMID: 34866270 PMCID: PMC9285730 DOI: 10.1002/eap.2505] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 01/04/2021] [Revised: 03/18/2021] [Accepted: 05/20/2021] [Indexed: 06/13/2023]
Abstract
The use of indicator species in forest conservation and management planning can facilitate enhanced preservation of biodiversity from the negative effects of forestry and other uses of land. However, this requires detailed and spatially comprehensive knowledge of the habitat preferences and distributions of selected focal indicator species. Unfortunately, due to limited resources for field surveys, only a small proportion of the occurrences of focal species is usually known. This shortcoming can be circumvented by using modeling techniques to predict the spatial distribution of suitable sites for the target species. Airborne laser scanning (ALS) and other remote sensing (RS) techniques have the potential to provide useful environmental data covering systematically large areas for these purposes. Here, we focused on six bird of prey and woodpecker species known to be good indicators of boreal forest biodiversity values. We used known nest sites of the six indicator species based on nestling ringing records. Thus, the most suitable nesting sites of these species provide important information for biodiversity-friendly forest management and conservation planning. We developed fine-grained, that is, 96 × 96 m grid cell resolution, predictive maps across the whole of Finland of the suitable nesting habitats based on ALS and other RS data and spatial information on the distribution of important forest stands for the six studied biodiversity indicator bird species based on nesting-habitat suitability modeling, that is, the MaxEnt model. Habitat preferences of the study species, as determined by MaxEnt, were in line with the previous knowledge of species-habitat relations. The proportion of suitable habitats of these species in protected areas (PAs) was considerable, but our analysis also revealed many potentially high-quality forest stands outside PAs. However, many of these sites are increasingly threatened by logging because of increased pressures for using forests for bioeconomy and forest industry based on National Forest Strategy. Predicting habitat suitability based on information on the nest sites of indicator species provides a new tool for systematic conservation planning over large areas in boreal forests in Europe, and a corresponding approach would also be feasible and recommendable elsewhere where similar data are available.
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Affiliation(s)
- Raimo Virkkala
- Finnish Environment Institute, Biodiversity CentreHelsinkiFinland
| | - Niko Leikola
- Finnish Environment Institute, Biodiversity CentreHelsinkiFinland
| | - Heini Kujala
- Finnish Museum of Natural HistoryUniversity of HelsinkiHelsinkiFinland
| | - Sonja Kivinen
- Finnish Environment Institute, Biodiversity CentreHelsinkiFinland
- Department of Geographical and Historical StudiesUniversity of Eastern FinlandJoensuuFinland
| | - Pekka Hurskainen
- Finnish Environment Institute, Biodiversity CentreHelsinkiFinland
| | - Saija Kuusela
- Finnish Environment Institute, Biodiversity CentreHelsinkiFinland
| | - Jari Valkama
- Finnish Museum of Natural HistoryUniversity of HelsinkiHelsinkiFinland
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20
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Beyer R, Manica A. Range Sizes of the World's Mammals, Birds, and Amphibians from the Mid-Holocene to the Industrial Period. Animals (Basel) 2021; 11:ani11123561. [PMID: 34944335 PMCID: PMC8698007 DOI: 10.3390/ani11123561] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/04/2021] [Revised: 11/30/2021] [Accepted: 12/01/2021] [Indexed: 11/25/2022] Open
Abstract
Simple Summary The geographic ranges of animal species play an important role for many ecological processes. Changes in climate, as well as human conversion of natural habitats, are two major factors that affect species’ range sizes. While the impact of these two factors in the Industrial era has been thoroughly studied, their pre-Industrial impacts are less well understood further back in time. Here, we combine global reconstructions of land use and climate from 6000 BCE to 1850 CE with data of the geographic distributions and habitat requirements of 16,919 mammal, bird, and amphibian species to estimate how human land use and natural climatic change have altered species’ ranges across past millennia. Our results suggest that pre-Industrial land use had only a small impact, yet one that affected almost all species negatively. Climatic variation evidently led to some range expansions and contractions, but overall had a small impact on the majority of species. In the context of a previous study of range changes in the more recent past, our results demonstrate that current rates of range losses exceed the magnitude of range changes seen over many thousands of years prior to the Industrial period to an alarming extent. Abstract Anthropogenic land use and climate change in the Industrial age have had substantial impacts on the geographic ranges of the world’s terrestrial animal species. How do these impacts compare against those in the millennia preceding the Industrial era? Here, we combine reconstructions of global climate and land use from 6000 BCE to 1850 CE with empirical data on the spatial distributions and habitat requirements of 16,919 mammal, bird, and amphibian species to estimate changes in their range sizes through time. We find that land use had only a small, yet almost entirely negative impact during most of the study period, whilst natural climatic variability led to some range expansions and contractions; but, overall it had a small impact on the majority of species. Our results provide a baseline for comparison with studies of range changes during the Industrial period, demonstrating that contemporary rates of range loss exceed the magnitude of range changes seen over many thousands of years prior to the Industrial period by an alarming extent.
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Affiliation(s)
- Robert Beyer
- Department of Zoology, University of Cambridge, Downing Street, Cambridge CB2 3EJ, UK;
- Potsdam Institute for Climate Impact Research (PIK), Member of the Leibniz Association, Telegrafenberg A 31, 14473 Potsdam, Germany
- Correspondence:
| | - Andrea Manica
- Department of Zoology, University of Cambridge, Downing Street, Cambridge CB2 3EJ, UK;
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21
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Stawski C, Simmonds EG. Contrasting physiological responses to habitat degradation in two arboreal mammals. iScience 2021; 24:103453. [PMID: 34988391 PMCID: PMC8710554 DOI: 10.1016/j.isci.2021.103453] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/11/2021] [Revised: 10/14/2021] [Accepted: 11/11/2021] [Indexed: 11/19/2022] Open
Abstract
To cope with the challenges presented by habitat degradation and loss, animals must often respond by adjusting physiological and behavioral mechanisms. Here we quantified physiological and behavioral traits, including body temperature and food consumption, of two mammals with differing thermoregulatory strategies in response to changes in climate and habitat. We show that both species responded to challenging climatic conditions by increasing torpor use to save energy, yet their responses were impacted by varying vegetation levels. Sugar gliders decreased torpor use in a dense habitat likely due to a signal of greater food production and protection from predators. Conversely, eastern pygmy possums employed more torpor perhaps to build up fat reserves in anticipation of leaner times. Indeed, in dense habitat eastern pygmy possums did not alter food intake yet showed an increase in body mass, whereas sugar gliders consumed less food and lost body mass, revealing the large energetic savings provided by torpor. Physiological responses to habitat degradation differ among mammals Hibernating eastern pygmy possums employ less torpor in degraded habitat Whereas sugar gliders, daily heterotherms, employ more torpor in degraded habitat These differing responses are perhaps due to perceived predation risk
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Affiliation(s)
- Clare Stawski
- Centre for Behavioural and Physiological Ecology, Zoology, University of New England, Armidale, NSW, 2351, Australia
- Department of Biology, Norwegian University of Science and Technology, 7491 Trondheim, Norway
- Corresponding author
| | - Emily G. Simmonds
- Department of Mathematical Sciences and Centre for Biodiversity Dynamics, Norwegian University of Science and Technology, 7491 Trondheim, Norway
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22
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Beyer RM, Manica A, Mora C. Shifts in global bat diversity suggest a possible role of climate change in the emergence of SARS-CoV-1 and SARS-CoV-2. THE SCIENCE OF THE TOTAL ENVIRONMENT 2021; 767:145413. [PMID: 33558040 PMCID: PMC7837611 DOI: 10.1016/j.scitotenv.2021.145413] [Citation(s) in RCA: 56] [Impact Index Per Article: 14.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/16/2020] [Revised: 01/20/2021] [Accepted: 01/21/2021] [Indexed: 05/17/2023]
Abstract
Bats are the likely zoonotic origin of several coronaviruses (CoVs) that infect humans, including SARS-CoV-1 and SARS-CoV-2, both of which have caused large-scale epidemics. The number of CoVs present in an area is strongly correlated with local bat species richness, which in turn is affected by climatic conditions that drive the geographical distributions of species. Here we show that the southern Chinese Yunnan province and neighbouring regions in Myanmar and Laos form a global hotspot of climate change-driven increase in bat richness. This region coincides with the likely spatial origin of bat-borne ancestors of SARS-CoV-1 and SARS-CoV-2. Accounting for an estimated increase in the order of 100 bat-borne CoVs across the region, climate change may have played a key role in the evolution or transmission of the two SARS CoVs.
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Affiliation(s)
- Robert M Beyer
- Department of Zoology, University of Cambridge, Downing Street, Cambridge CB2 3EJ, United Kingdom; Potsdam Institute for Climate Impact Research, Telegrafenberg A 31, 14473 Potsdam, Germany.
| | - Andrea Manica
- Department of Zoology, University of Cambridge, Downing Street, Cambridge CB2 3EJ, United Kingdom
| | - Camilo Mora
- Department of Geography and Environment, University of Hawai'i at Manoa, 2424 Maile Way, Honolulu, HI 96822, USA
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23
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Beyer R, Manica A. Global and country-level data of the biodiversity footprints of 175 crops and pasture. Data Brief 2021; 36:106982. [PMID: 33889689 PMCID: PMC8050031 DOI: 10.1016/j.dib.2021.106982] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/15/2020] [Revised: 03/12/2021] [Accepted: 03/16/2021] [Indexed: 11/24/2022] Open
Abstract
The destruction of natural habitat for cropland and pasture represents a major threat to global biodiversity. Despite widespread societal concern about biodiversity loss associated with food production, consumer access to quantitative estimates of the impact of crop production on the world's species has been very limited compared to assessments of other environmental variables such as greenhouse gas emissions or water use. Here, we present a consistent dataset of the biodiversity footprints of pasture and 175 crops at the global and national level. The data were generated by combining maps of the global distribution of agricultural areas in the year 2000 with spatially explicit estimates of the biodiversity loss associated with the conversion of natural habitat to farmland. Estimates were derived for three common alternative measures of biodiversity – species richness, threatened species richness, and range rarity – of the world's mammals, birds, and amphibians. Our dataset provides important quantitative information for food consumers and policy makers, allowing them to take evidence-based decisions to reduce the biodiversity footprint of global food production.
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Affiliation(s)
- Robert Beyer
- Department of Zoology, University of Cambridge1, Downing Street, Cambridge CB2 3EJ, United Kingdom
- Potsdam Institute for Climate Impact Research (PIK), Member of the Leibniz Association, Telegrafenberg A 31, 14473 Potsdam, Germany
- Corresponding author at: Potsdam Institute for Climate Impact Research (PIK), Member of the Leibniz Association, Telegrafenberg A 31, 14473 Potsdam, Germany @RobertMBeyer
| | - Andrea Manica
- Department of Zoology, University of Cambridge1, Downing Street, Cambridge CB2 3EJ, United Kingdom
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24
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Species Richness and Carbon Footprints of Vegetable Oils: Can High Yields Outweigh Palm Oil’s Environmental Impact? SUSTAINABILITY 2021. [DOI: 10.3390/su13041813] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
Abstract
Palm oil has been widely criticised for its high environmental impacts, leading to calls to replace it with alternative vegetable oils in food and cosmetic products. However, substituting palm oil would be environmentally beneficial only if the environmental footprint per litre oil were lower than those of alternative vegetable oils. Whether this is the case is not obvious, given the high oil yields of oil palm of up to 10 times those of alternative crops. Here, we combine global agricultural and environmental datasets to show that, among the world’s seven major vegetable oil crops (oil palm, soybean, rapeseed, sunflower, groundnut, coconut, olive), oil palm has the lowest average species richness and carbon footprint associated with an annual production of one litre of vegetable oil. For each crop, these yield-adjusted footprints differ substantially between major producer countries, which we find to be largely the result of differences in crop management. Closing agricultural yield gaps of oil crops through improved management practices would significantly reduce the environmental footprints per oil yield. This would minimise the need for further land conversion to oil cropland and indeed could increase production to such an extent that a significant area of oil croplands could be ecologically restored.
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