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For: Gong P, Tan H, Zhao S, Li H, Liu H, Ma Y, Zhang X, Rong J, Fu X, Lozano-Durán R, Li F, Zhou X. Geminiviruses encode additional small proteins with specific subcellular localizations and virulence function. Nat Commun 2021;12:4278. [PMID: 34257307 PMCID: PMC8277811 DOI: 10.1038/s41467-021-24617-4] [Citation(s) in RCA: 60] [Impact Index Per Article: 20.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/01/2021] [Accepted: 06/21/2021] [Indexed: 12/14/2022]  Open
Number Cited by Other Article(s)
1
Wu W, Ma F, Zhang X, Tan Y, Han T, Ding J, Wu J, Xing W, Wu B, Huang D, Zhang S, Xu Y, Song S. Research Progress on Viruses of Passiflora edulis. BIOLOGY 2024;13:839. [PMID: 39452147 PMCID: PMC11506102 DOI: 10.3390/biology13100839] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/14/2024] [Revised: 10/10/2024] [Accepted: 10/16/2024] [Indexed: 10/26/2024]
2
Sattar MN, Almaghasla MI, Tahir MN, El-Ganainy SM, Chellappan BV, Arshad M, Drou N. High-throughput sequencing discovered diverse monopartite and bipartite begomoviruses infecting cucumbers in Saudi Arabia. FRONTIERS IN PLANT SCIENCE 2024;15:1375405. [PMID: 39450090 PMCID: PMC11499130 DOI: 10.3389/fpls.2024.1375405] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 01/23/2024] [Accepted: 09/17/2024] [Indexed: 10/26/2024]
3
Crespo-Bellido A, Hoyer JS, Burgos-Amengual Y, Duffy S. Phylogeographic analysis of Begomovirus coat and replication-associated proteins. J Gen Virol 2024;105:002037. [PMID: 39446128 PMCID: PMC11500754 DOI: 10.1099/jgv.0.002037] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/20/2023] [Accepted: 10/04/2024] [Indexed: 10/25/2024]  Open
4
Diksha D, Sidharthan VK, Baranwal VK. Identification of a novel monopartite begomovirus associated with leaf curl disease of Citharexylum spinosum in India. Virus Genes 2024;60:568-571. [PMID: 38935183 DOI: 10.1007/s11262-024-02087-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/14/2024] [Accepted: 06/17/2024] [Indexed: 06/28/2024]
5
Yin ZN, Han PY, Han TT, Huang Y, Yang JJ, Zhang MS, Fang M, Zhong K, Zhang J, Lu QY. V2 Protein Enhances the Replication of Genomic DNA of Mulberry Crinkle Leaf Virus. Int J Mol Sci 2024;25:10521. [PMID: 39408850 PMCID: PMC11476850 DOI: 10.3390/ijms251910521] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/22/2024] [Revised: 09/02/2024] [Accepted: 09/10/2024] [Indexed: 10/20/2024]  Open
6
Zhang J, Yuan L, Li D, Yang X, Li J, Wu Z, Du Z. The C5 protein of euphorbia leaf curl virus is a virulence factor and gene silencing suppressor. Virology 2024;600:110252. [PMID: 39383774 DOI: 10.1016/j.virol.2024.110252] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/04/2024] [Accepted: 09/23/2024] [Indexed: 10/11/2024]
7
Jayanthi P, Geetanjali AS. Molecular characterization to study the genetic diversity of begomoviruses occurring in the major chilli growing areas of Tamil Nadu state of India. Int Microbiol 2024:10.1007/s10123-024-00580-0. [PMID: 39230779 DOI: 10.1007/s10123-024-00580-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/12/2024] [Revised: 08/06/2024] [Accepted: 08/13/2024] [Indexed: 09/05/2024]
8
Wu G, Chen J, Wang A, Yan F. Unveiling the viroporin arsenal in plant viruses: Implications for the future. PLoS Pathog 2024;20:e1012473. [PMID: 39235994 PMCID: PMC11376509 DOI: 10.1371/journal.ppat.1012473] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 09/07/2024]  Open
9
Lozano-Durán R. Viral Recognition and Evasion in Plants. ANNUAL REVIEW OF PLANT BIOLOGY 2024;75:655-677. [PMID: 39038248 DOI: 10.1146/annurev-arplant-060223-030224] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 07/24/2024]
10
Sun Z, Wu YX, Liu LZ, Tian YP, Li XD, Geng C. P3N-PIPO but not P3 is the avirulence determinant in melon carrying the Wmr resistance against watermelon mosaic virus, although they contain a common genetic determinant. J Virol 2024;98:e0050724. [PMID: 38775482 PMCID: PMC11237411 DOI: 10.1128/jvi.00507-24] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/18/2024] [Accepted: 04/21/2024] [Indexed: 06/14/2024]  Open
11
Kamal H, Zafar MM, Razzaq A, Parvaiz A, Ercisli S, Qiao F, Jiang X. Functional role of geminivirus encoded proteins in the host: Past and present. Biotechnol J 2024;19:e2300736. [PMID: 38900041 DOI: 10.1002/biot.202300736] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/26/2023] [Revised: 03/19/2024] [Accepted: 04/16/2024] [Indexed: 06/21/2024]
12
Chen Y, Guo S, Jiang L, Yan F, Hao K, Wang Z, An M, Xia Z, Li F, Zhou X, Wu Y. Molecular characterization and pathogenicity of a novel monopartite geminivirus infecting tobacco in China. Virology 2024;594:110061. [PMID: 38518441 DOI: 10.1016/j.virol.2024.110061] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/20/2023] [Revised: 03/11/2024] [Accepted: 03/14/2024] [Indexed: 03/24/2024]
13
Wu J, Zhang Y, Li F, Zhang X, Ye J, Wei T, Li Z, Tao X, Cui F, Wang X, Zhang L, Yan F, Li S, Liu Y, Li D, Zhou X, Li Y. Plant virology in the 21st century in China: Recent advances and future directions. JOURNAL OF INTEGRATIVE PLANT BIOLOGY 2024;66:579-622. [PMID: 37924266 DOI: 10.1111/jipb.13580] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/12/2023] [Accepted: 11/02/2023] [Indexed: 11/06/2023]
14
Torralba B, Blanc S, Michalakis Y. Reassortments in single-stranded DNA multipartite viruses: Confronting expectations based on molecular constraints with field observations. Virus Evol 2024;10:veae010. [PMID: 38384786 PMCID: PMC10880892 DOI: 10.1093/ve/veae010] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/31/2023] [Revised: 11/23/2023] [Accepted: 01/30/2024] [Indexed: 02/23/2024]  Open
15
Prasad A, Sharma S, Prasad M. Deeper look into viruses: replication intermediates do code! PLANT CELL REPORTS 2024;43:52. [PMID: 38308009 DOI: 10.1007/s00299-023-03135-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/06/2023] [Accepted: 12/19/2023] [Indexed: 02/04/2024]
16
Han TT, Tang JX, Fang M, Zhang P, Han PY, Yin ZN, Ma Y, Zhang J, Lu QY. Two genes encoded by mulberry crinkle leaf virus (MCLV): The V4 gene enhances viral replication, and the V5 gene is needed for MCLV infection in Nicotiana benthamiana. Virus Res 2024;339:199288. [PMID: 38043724 PMCID: PMC10751690 DOI: 10.1016/j.virusres.2023.199288] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/06/2023] [Revised: 11/21/2023] [Accepted: 11/26/2023] [Indexed: 12/05/2023]
17
Li F, Jia M, Wang A. Hidden viral proteins: How powerful are they? PLoS Pathog 2024;20:e1011905. [PMID: 38236814 PMCID: PMC10795976 DOI: 10.1371/journal.ppat.1011905] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/22/2024]  Open
18
Cheng X, Wu X, Fang R. The minus strand of positive-sense RNA viruses encodes small proteins. Trends Microbiol 2024;32:6-7. [PMID: 37951770 DOI: 10.1016/j.tim.2023.10.012] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/19/2023] [Revised: 10/30/2023] [Accepted: 10/31/2023] [Indexed: 11/14/2023]
19
Romero-Rodríguez B, Petek M, Jiao C, Križnik M, Zagorščak M, Fei Z, Bejarano ER, Gruden K, Castillo AG. Transcriptional and epigenetic changes during tomato yellow leaf curl virus infection in tomato. BMC PLANT BIOLOGY 2023;23:651. [PMID: 38110861 PMCID: PMC10726652 DOI: 10.1186/s12870-023-04534-y] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/10/2023] [Accepted: 10/17/2023] [Indexed: 12/20/2023]
20
Shafiq M, Ondrasek G, Al-Sadi AM, Shahid MS. Molecular Signature of a Novel Alternanthera Yellow Vein Virus Variant Infecting the Ageratum conyzoides Weed in Oman. Viruses 2023;15:2381. [PMID: 38140622 PMCID: PMC10747960 DOI: 10.3390/v15122381] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/15/2023] [Revised: 11/30/2023] [Accepted: 12/01/2023] [Indexed: 12/24/2023]  Open
21
Prasad A, Sharma S, Prasad M. Post translational modifications at the verge of plant-geminivirus interaction. BIOCHIMICA ET BIOPHYSICA ACTA. GENE REGULATORY MECHANISMS 2023;1866:194983. [PMID: 37717937 DOI: 10.1016/j.bbagrm.2023.194983] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/31/2023] [Revised: 09/10/2023] [Accepted: 09/12/2023] [Indexed: 09/19/2023]
22
Zhang W, Liu S, Xie G, Li X, Zhai Y, Lin W, Wu Z, Du Z, Zhang J. Size Restriction Is Required for Proper Functioning of a Bipartite Begomovirus AC4 Protein. MOLECULAR PLANT-MICROBE INTERACTIONS : MPMI 2023;36:774-778. [PMID: 37665597 DOI: 10.1094/mpmi-02-23-0020-sc] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 09/05/2023]
23
Gong P, Shen Q, Zhang M, Qiao R, Jiang J, Su L, Zhao S, Fu S, Ma Y, Ge L, Wang Y, Lozano-Durán R, Wang A, Li F, Zhou X. Plant and animal positive-sense single-stranded RNA viruses encode small proteins important for viral infection in their negative-sense strand. MOLECULAR PLANT 2023;16:1794-1810. [PMID: 37777826 DOI: 10.1016/j.molp.2023.09.020] [Citation(s) in RCA: 7] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/03/2023] [Revised: 07/03/2023] [Accepted: 09/26/2023] [Indexed: 10/02/2023]
24
Rajabu CA, Dallas MM, Chiunga E, De León L, Ateka EM, Tairo F, Ndunguru J, Ascencio-Ibanez JT, Hanley-Bowdoin L. SEGS-1 a cassava genomic sequence increases the severity of African cassava mosaic virus infection in Arabidopsis thaliana. FRONTIERS IN PLANT SCIENCE 2023;14:1250105. [PMID: 37915512 PMCID: PMC10616593 DOI: 10.3389/fpls.2023.1250105] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 06/29/2023] [Accepted: 10/04/2023] [Indexed: 11/03/2023]
25
Galewski PJ, Majumdar R, Lebar MD, Strausbaugh CA, Eujayl IA. Combined Omics Approaches Reveal Distinct Mechanisms of Resistance and/or Susceptibility in Sugar Beet Double Haploid Genotypes at Early Stages of Beet Curly Top Virus Infection. Int J Mol Sci 2023;24:15013. [PMID: 37834460 PMCID: PMC10573692 DOI: 10.3390/ijms241915013] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/01/2023] [Revised: 10/06/2023] [Accepted: 10/07/2023] [Indexed: 10/15/2023]  Open
26
Guo Q, Sun Y, Ji C, Kong Z, Liu Z, Li Y, Li Y, Lai H. Plant resistance to tomato yellow leaf curl virus is enhanced by Bacillus amyloliquefaciens Ba13 through modulation of RNA interference. Front Microbiol 2023;14:1251698. [PMID: 37869663 PMCID: PMC10587425 DOI: 10.3389/fmicb.2023.1251698] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/02/2023] [Accepted: 09/18/2023] [Indexed: 10/24/2023]  Open
27
Zhang L, Wang S, Ruan S, Nzabanita C, Wang Y, Guo L. A Mycovirus VIGS Vector Confers Hypovirulence to a Plant Pathogenic Fungus to Control Wheat FHB. ADVANCED SCIENCE (WEINHEIM, BADEN-WURTTEMBERG, GERMANY) 2023;10:e2302606. [PMID: 37587761 PMCID: PMC10582431 DOI: 10.1002/advs.202302606] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/24/2023] [Revised: 08/01/2023] [Indexed: 08/18/2023]
28
Shakir S, Mubin M, Nahid N, Serfraz S, Qureshi MA, Lee TK, Liaqat I, Lee S, Nawaz-ul-Rehman MS. REPercussions: how geminiviruses recruit host factors for replication. Front Microbiol 2023;14:1224221. [PMID: 37799604 PMCID: PMC10548238 DOI: 10.3389/fmicb.2023.1224221] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/22/2023] [Accepted: 08/21/2023] [Indexed: 10/07/2023]  Open
29
Lin W, Qiu P, Xu Y, Chen L, Wu Z, Zhang J, Du Z. Transcription start site mapping of geminiviruses using the in vitro cap-snatching of a tenuivirus. J Virol Methods 2023;319:114757. [PMID: 37257758 DOI: 10.1016/j.jviromet.2023.114757] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/02/2023] [Revised: 05/26/2023] [Accepted: 05/27/2023] [Indexed: 06/02/2023]
30
Zhao S, Gong P, Liu J, Liu H, Lozano-Durán R, Zhou X, Li F. Geminivirus C5 proteins mediate formation of virus complexes at plasmodesmata for viral intercellular movement. PLANT PHYSIOLOGY 2023;193:322-338. [PMID: 37306279 DOI: 10.1093/plphys/kiad338] [Citation(s) in RCA: 4] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/16/2022] [Revised: 04/21/2023] [Accepted: 05/16/2023] [Indexed: 06/13/2023]
31
Namgial T, Singh AK, Singh NP, Francis A, Chattopadhyay D, Voloudakis A, Chakraborty S. Differential expression of genes during recovery of Nicotiana tabacum from tomato leaf curl Gujarat virus infection. PLANTA 2023;258:37. [PMID: 37405593 PMCID: PMC10322791 DOI: 10.1007/s00425-023-04182-4] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/17/2023] [Accepted: 06/10/2023] [Indexed: 07/06/2023]
32
Fortes IM, Fernández-Muñoz R, Moriones E. Crinivirus Tomato Chlorosis Virus Compromises the Control of Tomato Yellow Leaf Curl Virus in Tomato Plants by the Ty-1 Gene. PHYTOPATHOLOGY 2023;113:1347-1359. [PMID: 36690608 DOI: 10.1094/phyto-09-22-0334-r] [Citation(s) in RCA: 4] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/17/2023]
33
Kumar S, Gupta N, Chakraborty S. Geminiviral betasatellites: critical viral ammunition to conquer plant immunity. Arch Virol 2023;168:196. [PMID: 37386317 DOI: 10.1007/s00705-023-05776-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/31/2023] [Accepted: 03/30/2023] [Indexed: 07/01/2023]
34
Liu H, Chang Z, Zhao S, Gong P, Zhang M, Lozano-Durán R, Yan H, Zhou X, Li F. Functional identification of a novel C7 protein of tomato yellow leaf curl virus. Virology 2023;585:117-126. [PMID: 37331112 DOI: 10.1016/j.virol.2023.05.011] [Citation(s) in RCA: 5] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/12/2023] [Revised: 05/23/2023] [Accepted: 05/25/2023] [Indexed: 06/20/2023]
35
Fiallo-Olivé E, Navas-Castillo J. Begomoviruses: what is the secret(s) of their success? TRENDS IN PLANT SCIENCE 2023;28:715-727. [PMID: 36805143 DOI: 10.1016/j.tplants.2023.01.012] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/19/2022] [Revised: 01/16/2023] [Accepted: 01/26/2023] [Indexed: 05/13/2023]
36
Zwolinski AM, Brigden A, Rey MEC. Differences in the 3' intergenic region and the V2 protein of two sequence variants of tomato curly stunt virus play an important role in disease pathology in Nicotiana benthamiana. PLoS One 2023;18:e0286149. [PMID: 37220127 PMCID: PMC10205009 DOI: 10.1371/journal.pone.0286149] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/19/2022] [Accepted: 05/10/2023] [Indexed: 05/25/2023]  Open
37
Crespo-Bellido A, Duffy S. The how of counter-defense: viral evolution to combat host immunity. Curr Opin Microbiol 2023;74:102320. [PMID: 37075547 DOI: 10.1016/j.mib.2023.102320] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/07/2023] [Revised: 03/10/2023] [Accepted: 03/23/2023] [Indexed: 04/21/2023]
38
Sangeeta, Kumar RV, Yadav BK, Bhatt BS, Krishna R, Krishnan N, Karkute SG, Kumar S, Singh B, Singh AK. Diverse begomovirus-betasatellite complexes cause tomato leaf curl disease in the western India. Virus Res 2023;328:199079. [PMID: 36813240 PMCID: PMC10194379 DOI: 10.1016/j.virusres.2023.199079] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/16/2022] [Revised: 02/13/2023] [Accepted: 02/17/2023] [Indexed: 02/24/2023]
39
Siskos L, Antoniou M, Riado J, Enciso M, Garcia C, Liberti D, Esselink D, Baranovskiy AG, Tahirov TH, Visser RGF, Kormelink R, Bai Y, Schouten HJ. DNA primase large subunit is an essential plant gene for geminiviruses, putatively priming viral ss-DNA replication. FRONTIERS IN PLANT SCIENCE 2023;14:1130723. [PMID: 37008458 PMCID: PMC10064052 DOI: 10.3389/fpls.2023.1130723] [Citation(s) in RCA: 5] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 12/23/2022] [Accepted: 03/03/2023] [Indexed: 06/19/2023]
40
Zhong X, Li J, Yang L, Wu X, Xu H, Hu T, Wang Y, Wang Y, Wang Z. Genome-wide identification and expression analysis of wall-associated kinase (WAK) and WAK-like kinase gene family in response to tomato yellow leaf curl virus infection in Nicotiana benthamiana. BMC PLANT BIOLOGY 2023;23:146. [PMID: 36927306 PMCID: PMC10021985 DOI: 10.1186/s12870-023-04112-2] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/23/2022] [Accepted: 02/10/2023] [Indexed: 06/18/2023]
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Zhang J, Ma M, Liu Y, Ismayil A. Plant Defense and Viral Counter-Defense during Plant-Geminivirus Interactions. Viruses 2023;15:v15020510. [PMID: 36851725 PMCID: PMC9964946 DOI: 10.3390/v15020510] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/15/2023] [Revised: 02/09/2023] [Accepted: 02/10/2023] [Indexed: 02/17/2023]  Open
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Kumar R, Dasgupta I. Geminiviral C4/AC4 proteins: An emerging component of the viral arsenal against plant defence. Virology 2023;579:156-168. [PMID: 36693289 DOI: 10.1016/j.virol.2023.01.005] [Citation(s) in RCA: 6] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/24/2022] [Revised: 12/26/2022] [Accepted: 01/08/2023] [Indexed: 01/12/2023]
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Yu J, Jiang W, Zhu SB, Liao Z, Dou X, Liu J, Guo FB, Dong C. Prediction of protein-coding small ORFs in multi-species using integrated sequence-derived features and the random forest model. Methods 2023;210:10-19. [PMID: 36621557 DOI: 10.1016/j.ymeth.2022.12.003] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/07/2022] [Revised: 12/27/2022] [Accepted: 12/30/2022] [Indexed: 01/07/2023]  Open
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Bupi N, Sangaraju VK, Phan LT, Lal A, Vo TTB, Ho PT, Qureshi MA, Tabassum M, Lee S, Manavalan B. An Effective Integrated Machine Learning Framework for Identifying Severity of Tomato Yellow Leaf Curl Virus and Their Experimental Validation. RESEARCH (WASHINGTON, D.C.) 2023;6:0016. [PMID: 36930763 PMCID: PMC10013792 DOI: 10.34133/research.0016] [Citation(s) in RCA: 17] [Impact Index Per Article: 17.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/03/2022] [Accepted: 11/07/2022] [Indexed: 01/13/2023]
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Quadros AFF, Ferro CG, de Rezende RR, Godinho MT, Xavier CAD, Nogueira AM, Alfenas-Zerbini P, Zerbini FM. Begomovirus populations in single plants are complex and may include both well-adapted and poorly-adapted viruses. Virus Res 2023;323:198969. [PMID: 36257487 PMCID: PMC10194161 DOI: 10.1016/j.virusres.2022.198969] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/28/2022] [Revised: 10/10/2022] [Accepted: 10/13/2022] [Indexed: 11/05/2022]
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Dubey D, Hoyer JS, Duffy S. Limited role of recombination in the global diversification of begomovirus DNA-B proteins. Virus Res 2023;323:198959. [PMID: 36209920 PMCID: PMC10194223 DOI: 10.1016/j.virusres.2022.198959] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/12/2022] [Revised: 10/04/2022] [Accepted: 10/05/2022] [Indexed: 11/06/2022]
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Zhang M, Cao B, Zhang H, Fan Z, Zhou X, Li F. Geminivirus satellite-encoded βC1 activates UPR, induces bZIP60 nuclear export, and manipulates the expression of bZIP60 downstream genes to benefit virus infection. SCIENCE CHINA LIFE SCIENCES 2022:10.1007/s11427-022-2196-y. [DOI: 10.1007/s11427-022-2196-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/11/2022] [Accepted: 09/20/2022] [Indexed: 12/14/2022]
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Guo Y, Jia MA, Li S, Li F. Geminiviruses boost active DNA demethylation for counter-defense. Trends Microbiol 2022;30:1121-1124. [PMID: 35249803 DOI: 10.1016/j.tim.2022.02.002] [Citation(s) in RCA: 7] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/02/2022] [Accepted: 02/10/2022] [Indexed: 01/13/2023]
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Gorovits R, Shteinberg M, Anfoka G, Czosnek H. Exploiting Virus Infection to Protect Plants from Abiotic Stresses: Tomato Protection by a Begomovirus. PLANTS (BASEL, SWITZERLAND) 2022;11:2944. [PMID: 36365396 PMCID: PMC9657025 DOI: 10.3390/plants11212944] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 09/14/2022] [Revised: 10/13/2022] [Accepted: 10/25/2022] [Indexed: 06/16/2023]
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Wang L, Tan H, Medina-Puche L, Wu M, Garnelo Gomez B, Gao M, Shi C, Jimenez-Gongora T, Fan P, Ding X, Zhang D, Ding Y, Rosas-Díaz T, Liu Y, Aguilar E, Fu X, Lozano-Durán R. Combinatorial interactions between viral proteins expand the potential functional landscape of the tomato yellow leaf curl virus proteome. PLoS Pathog 2022;18:e1010909. [PMID: 36256684 PMCID: PMC9633003 DOI: 10.1371/journal.ppat.1010909] [Citation(s) in RCA: 9] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/18/2022] [Revised: 11/03/2022] [Accepted: 09/30/2022] [Indexed: 11/06/2022]  Open
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