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Deviers J, Cailliez F, de la Lande A, Kattnig DR. Avian cryptochrome 4 binds superoxide. Comput Struct Biotechnol J 2024; 26:11-21. [PMID: 38204818 PMCID: PMC10776438 DOI: 10.1016/j.csbj.2023.12.009] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/20/2023] [Revised: 12/06/2023] [Accepted: 12/12/2023] [Indexed: 01/12/2024] Open
Abstract
Flavin-binding cryptochromes are blue-light sensitive photoreceptors that have been implicated with magnetoreception in some species. The photocycle involves an intra-protein photo-reduction of the flavin cofactor, generating a magnetosensitive radical pair, and its subsequent re-oxidation. Superoxide (O2 • - ) is generated in the re-oxidation with molecular oxygen. The resulting O2 • - -containing radical pairs have also been hypothesised to underpin various magnetosensitive traits, but due to fast spin relaxation when tumbling in solution would require immobilisation. We here describe our insights in the binding of superoxide to cryptochrome 4 from C. livia based on extensive all-atom molecular dynamics studies and density-functional theory calculations. The positively charged "crypt" region that leads to the flavin binding pocket transiently binds O2 • - at 5 flexible binding sites centred on arginine residues. Typical binding times amounted to tens of nanoseconds, but exceptional binding events extended to several hundreds of nanoseconds and slowed the rotational diffusion, thereby realising rotational correlation times as large as 1 ns. The binding sites are particularly efficient in scavenging superoxide escaping from a putative generation site close to the flavin-cofactor, possibly implying a functional relevance. We discuss our findings in view of a potential magnetosensitivity of biological flavin semiquinone/superoxide radical pairs.
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Affiliation(s)
- Jean Deviers
- Living Systems Institute and Department of Physics, University of Exeter, Stocker Road, Exeter, Devon, EX4 4QD, United Kingdom
- Institut de Chimie Physique, CNRS UMR 8000, Université Paris-Saclay, 91405 Orsay, France
| | - Fabien Cailliez
- Institut de Chimie Physique, CNRS UMR 8000, Université Paris-Saclay, 91405 Orsay, France
| | - Aurélien de la Lande
- Institut de Chimie Physique, CNRS UMR 8000, Université Paris-Saclay, 91405 Orsay, France
| | - Daniel R. Kattnig
- Living Systems Institute and Department of Physics, University of Exeter, Stocker Road, Exeter, Devon, EX4 4QD, United Kingdom
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2
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Karwinkel T, Peter A, Holland RA, Thorup K, Bairlein F, Schmaljohann H. A conceptual framework on the role of magnetic cues in songbird migration ecology. Biol Rev Camb Philos Soc 2024; 99:1576-1593. [PMID: 38629349 DOI: 10.1111/brv.13082] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/05/2023] [Revised: 03/27/2024] [Accepted: 03/29/2024] [Indexed: 07/06/2024]
Abstract
Migrating animals perform astonishing seasonal movements by orienting and navigating over thousands of kilometres with great precision. Many migratory species use cues from the sun, stars, landmarks, olfaction and the Earth's magnetic field for this task. Among vertebrates, songbirds are the most studied taxon in magnetic-cue-related research. Despite multiple studies, we still lack a clear understanding of when, where and how magnetic cues affect the decision-making process of birds and hence, their realised migratory behaviour in the wild. This understanding is especially important to interpret the results of laboratory experiments in an ecologically appropriate way. In this review, we summarise the current findings about the role of magnetic cues for migratory decisions in songbirds. First, we review the methodological principles for orientation and navigation research, specifically by comparing experiments on caged birds with experiments on free-flying birds. While cage experiments can show the sensory abilities of birds, studies with free-flying birds can characterise the ecological roles of magnetic cues. Second, we review the migratory stages, from stopover to endurance flight, in which songbirds use magnetic cues for their migratory decisions and incorporate this into a novel conceptual framework. While we lack studies examining whether and when magnetic cues affect orientation or navigation decisions during flight, the role of magnetic cues during stopover is relatively well studied, but mostly in the laboratory. Notably, many such studies have produced contradictory results so that understanding the biological importance of magnetic cues for decisions in free-flying songbirds is not straightforward. One potential explanation is that reproducibility of magnetic-cue experiments is low, probably because variability in the behavioural responses of birds among experiments is high. We are convinced that parts of this variability can be explained by species-specific and context-dependent reactions of birds to the study conditions and by the bird's high flexibility in whether they include magnetic cues in a decision or not. Ultimately, this review should help researchers in the challenging field of magnetoreception to design experiments meticulously and interpret results of such studies carefully by considering the migration ecology of their focal species.
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Affiliation(s)
- Thiemo Karwinkel
- Institute of Avian Research 'Vogelwarte Helgoland', An der Vogelwarte 21, 26386, Wilhelmshaven, Germany
- Carl von Ossietzky Universität Oldenburg, School of Mathematics and Science, Institute of Biology and Environmental Sciences, Ammerländer Heerstraße 114-118, 26129, Oldenburg, Germany
| | - Annika Peter
- Carl von Ossietzky Universität Oldenburg, School of Mathematics and Science, Institute of Biology and Environmental Sciences, Ammerländer Heerstraße 114-118, 26129, Oldenburg, Germany
| | - Richard A Holland
- School of Environmental and Natural Sciences, Bangor University, Bangor, LL57 2UW, UK
| | - Kasper Thorup
- Center for Macroecology, Evolution and Climate, Natural History Museum of Denmark, University of Copenhagen, Universitetsparken 15, DK-2100, Copenhagen, Denmark
| | - Franz Bairlein
- Institute of Avian Research 'Vogelwarte Helgoland', An der Vogelwarte 21, 26386, Wilhelmshaven, Germany
- Max Planck Institute of Animal Behavior, Am Obstberg 1, Radolfzell, 78315, Germany
| | - Heiko Schmaljohann
- Institute of Avian Research 'Vogelwarte Helgoland', An der Vogelwarte 21, 26386, Wilhelmshaven, Germany
- Carl von Ossietzky Universität Oldenburg, School of Mathematics and Science, Institute of Biology and Environmental Sciences, Ammerländer Heerstraße 114-118, 26129, Oldenburg, Germany
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3
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Bai Y, Shao S, Zhang J, Zhao X, Fang C, Wang T, Wang Y, Zhao H. A Review of Brain-Inspired Cognition and Navigation Technology for Mobile Robots. CYBORG AND BIONIC SYSTEMS 2024; 5:0128. [PMID: 38938902 PMCID: PMC11210290 DOI: 10.34133/cbsystems.0128] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/29/2023] [Accepted: 04/23/2024] [Indexed: 06/29/2024] Open
Abstract
Brain-inspired navigation technologies combine environmental perception, spatial cognition, and target navigation to create a comprehensive navigation research system. Researchers have used various sensors to gather environmental data and enhance environmental perception using multimodal information fusion. In spatial cognition, a neural network model is used to simulate the navigation mechanism of the animal brain and to construct an environmental cognition map. However, existing models face challenges in achieving high navigation success rate and efficiency. In addition, the limited incorporation of navigation mechanisms borrowed from animal brains necessitates further exploration. On the basis of the brain-inspired navigation process, this paper launched a systematic study on brain-inspired environment perception, brain-inspired spatial cognition, and goal-based navigation in brain-inspired navigation, which provides a new classification of brain-inspired cognition and navigation techniques and a theoretical basis for subsequent experimental studies. In the future, brain-inspired navigation technology should learn from more perfect brain-inspired mechanisms to improve its generalization ability and be simultaneously applied to large-scale distributed intelligent body cluster navigation. The multidisciplinary nature of brain-inspired navigation technology presents challenges, and multidisciplinary scholars must cooperate to promote the development of this technology.
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Affiliation(s)
- Yanan Bai
- School of Computer Science and Engineering,
Northeastern University, Shenyang 110819, China
- State Key Laboratory of Robotics, Shenyang Institute of Automation,
Chinese Academy of Sciences, Shenyang 110016, China
- Institutes for Robotics and Intelligent Manufacturing,
Chinese Academy of Sciences, Shenyang 110169, China
| | - Shiliang Shao
- State Key Laboratory of Robotics, Shenyang Institute of Automation,
Chinese Academy of Sciences, Shenyang 110016, China
- Institutes for Robotics and Intelligent Manufacturing,
Chinese Academy of Sciences, Shenyang 110169, China
| | - Jin Zhang
- School of Computer Science and Engineering,
Northeastern University, Shenyang 110819, China
- State Key Laboratory of Robotics, Shenyang Institute of Automation,
Chinese Academy of Sciences, Shenyang 110016, China
- Institutes for Robotics and Intelligent Manufacturing,
Chinese Academy of Sciences, Shenyang 110169, China
| | - Xianzhe Zhao
- School of Computer Science and Engineering,
Northeastern University, Shenyang 110819, China
- State Key Laboratory of Robotics, Shenyang Institute of Automation,
Chinese Academy of Sciences, Shenyang 110016, China
- Institutes for Robotics and Intelligent Manufacturing,
Chinese Academy of Sciences, Shenyang 110169, China
| | - Chuxi Fang
- School of Computer Science and Engineering,
Northeastern University, Shenyang 110819, China
- State Key Laboratory of Robotics, Shenyang Institute of Automation,
Chinese Academy of Sciences, Shenyang 110016, China
- Institutes for Robotics and Intelligent Manufacturing,
Chinese Academy of Sciences, Shenyang 110169, China
| | - Ting Wang
- State Key Laboratory of Robotics, Shenyang Institute of Automation,
Chinese Academy of Sciences, Shenyang 110016, China
- Institutes for Robotics and Intelligent Manufacturing,
Chinese Academy of Sciences, Shenyang 110169, China
| | - Yongliang Wang
- Department of Artificial Intelligence,
University of Groningen, Groningen 9747 AG, Netherlands
| | - Hai Zhao
- School of Computer Science and Engineering,
Northeastern University, Shenyang 110819, China
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4
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Gao B, Hu G, Chapman JW. Effects of nocturnal celestial illumination on high-flying migrant insects. Philos Trans R Soc Lond B Biol Sci 2024; 379:20230115. [PMID: 38705175 PMCID: PMC11070249 DOI: 10.1098/rstb.2023.0115] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/19/2023] [Accepted: 02/27/2024] [Indexed: 05/07/2024] Open
Abstract
Radar networks hold great promise for monitoring population trends of migrating insects. However, it is important to elucidate the nature of responses to environmental cues. We use data from a mini-network of vertical-looking entomological radars in the southern UK to investigate changes in nightly abundance, flight altitude and behaviour of insect migrants, in relation to meteorological and celestial conditions. Abundance of migrants showed positive relationships with air temperature, indicating that this is the single most important variable influencing the decision to initiate migration. In addition, there was a small but significant effect of moonlight illumination, with more insects migrating on full moon nights. While the effect of nocturnal illumination levels on abundance was relatively minor, there was a stronger effect on the insects' ability to orientate close to downwind: flight headings were more tightly clustered on nights when the moon was bright and when cloud cover was sparse. This indicates that nocturnal illumination is important for the navigational mechanisms used by nocturnal insect migrants. Further, our results clearly show that environmental conditions such as air temperature and light levels must be considered if long-term radar datasets are to be used to assess changing population trends of migrants. This article is part of the theme issue 'Towards a toolkit for global insect biodiversity monitoring'.
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Affiliation(s)
- Boya Gao
- Department of Entomology, Nanjing Agricultural University, Nanjing 210095, People's Republic of China
- Centre of Ecology and Conservation, University of Exeter, Penryn, Cornwall TR10 9FE, UK
| | - Gao Hu
- Department of Entomology, Nanjing Agricultural University, Nanjing 210095, People's Republic of China
- Centre of Ecology and Conservation, University of Exeter, Penryn, Cornwall TR10 9FE, UK
| | - Jason W. Chapman
- Department of Entomology, Nanjing Agricultural University, Nanjing 210095, People's Republic of China
- Centre of Ecology and Conservation, University of Exeter, Penryn, Cornwall TR10 9FE, UK
- Environment and Sustainability Institute, University of Exeter, Penryn, Cornwall TR10 9FE, UK
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5
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Kretschmer K, Frederiksen A, Reinholdt P, Kongsted J, Solov’yov IA. Understanding the Red Shift in the Absorption Spectrum of the FAD Cofactor in ClCry4 Protein. J Phys Chem B 2024; 128:5320-5326. [PMID: 38805723 PMCID: PMC11163422 DOI: 10.1021/acs.jpcb.4c00710] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/01/2024] [Revised: 05/03/2024] [Accepted: 05/16/2024] [Indexed: 05/30/2024]
Abstract
It is still a puzzle that has not been entirely solved how migratory birds utilize the Earth's magnetic field for biannual migration. The most consistent explanation thus far is rooted in the modulation of the biological function of the cryptochrome 4 (Cry4) protein by an external magnetic field. This phenomenon is closely linked with the flavin adenine dinucleotide (FAD) cofactor that is noncovalently bound in the protein. Cry4 is activated by blue light, which is absorbed by the FAD cofactor. Subsequent electron and proton transfers trigger radical pair formation in the protein, which is sensitive to the external magnetic field. An important long-lasting redox state of the FAD cofactor is the signaling (FADH•) state, which is present after the transient electron transfer steps have been completed. Recent experimental efforts succeeded in crystallizing the Cry4 protein from Columbia livia (ClCry4) with all of the important residues needed for protein photoreduction. This specific crystallization of Cry4 protein so far is the only avian cryptochrome crystal structure available, which, however, has great similarity to the Cry4 proteins of night migratory birds. The previous experimental studies of the ClCry4 protein included the absorption properties of the protein in its different redox states. The absorption spectrum of the FADH• state demonstrated a peculiar red shift compared to the photoabsorption properties of the FAD cofactor in its FADH• state in other Cry proteins from other species. The aim of this study is to understand this red shift by employing the tools of computational microscopy and, in particular, a QM/MM approach that relies on the polarizable embedding approximation.
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Affiliation(s)
- Katarina Kretschmer
- Institute of Physics, Carl von Ossietzky Universität Oldenburg, Carl-von-Ossietzky Str. 9-11, 26129 Oldenburg, Germany
| | - Anders Frederiksen
- Institute of Physics, Carl von Ossietzky Universität Oldenburg, Carl-von-Ossietzky Str. 9-11, 26129 Oldenburg, Germany
| | - Peter Reinholdt
- Department of Physics, Chemistry and Pharmacy, University of Southern Denmark, DK 5230 Odense, Denmark
| | - Jacob Kongsted
- Department of Physics, Chemistry and Pharmacy, University of Southern Denmark, DK 5230 Odense, Denmark
| | - Ilia A. Solov’yov
- Institute of Physics, Carl von Ossietzky Universität Oldenburg, Carl-von-Ossietzky Str. 9-11, 26129 Oldenburg, Germany
- Research Centre for Neurosensory
Science, Carl von Ossietzky Universität
Oldenburg, Carl-von-Ossietzky
Str. 9-11, 26129 Oldenburg, Germany
- Center
for Nanoscale Dynamics (CENAD), Carl von
Ossietzky Universität Oldenburg, Ammerländer Heerstr. 114-118, 26129 Oldenburg, Germany
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6
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Pot MT, Visser ME, Helm B, von Rönn JAC, van der Jeugd HP. Revisiting Perdeck's massive avian migration experiments debunks alternative social interpretations. Biol Lett 2024; 20:20240217. [PMID: 38955225 DOI: 10.1098/rsbl.2024.0217] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/20/2024] [Accepted: 05/23/2024] [Indexed: 07/04/2024] Open
Abstract
Whether avian migrants can adapt to their changing world depends on the relative importance of genetic and environmental variation for the timing and direction of migration. In the classic series of field experiments on avian migration, A. C. Perdeck discovered that translocated juveniles failed to reach goal areas, whereas translocated adults performed 'true-goal navigation'. His translocations of > 14 000 common starlings (Sturnus vulgaris) suggested that genetic mechanisms guide juveniles into a population-specific direction, i.e. 'vector navigation'. However, alternative explanations involving social learning after release in juveniles could not be excluded. By adding historical data from translocation sites, data that was unavailable in Perdeck's days, and by integrated analyses including the original data, we could not explain juvenile migrations from possible social information upon release. Despite their highly social behaviour, our findings are consistent with the idea that juvenile starlings follow inherited information and independently reach their winter quarters. Similar to more solitarily migrating songbirds, starlings would require genetic change to adjust the migration route in response to global change.
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Affiliation(s)
- Morrison T Pot
- Department of Animal Ecology, Netherlands Institute of Ecology (NIOO-KNAW), Wageningen, The Netherlands
- Vogeltrekstation - Dutch Centre for Avian Migration and Demography, Netherlands Institute of Ecology (NIOO-KNAW), Wageningen, The Netherlands
- Groningen Institute for Evolutionary Life Sciences (GELIFES), University of Groningen, Groningen, The Netherlands
| | - Marcel E Visser
- Department of Animal Ecology, Netherlands Institute of Ecology (NIOO-KNAW), Wageningen, The Netherlands
- Groningen Institute for Evolutionary Life Sciences (GELIFES), University of Groningen, Groningen, The Netherlands
| | - Barbara Helm
- Groningen Institute for Evolutionary Life Sciences (GELIFES), University of Groningen, Groningen, The Netherlands
- Swiss Ornithological Institute, Sempach, Lucerne, Switzerland
| | | | - Henk P van der Jeugd
- Department of Animal Ecology, Netherlands Institute of Ecology (NIOO-KNAW), Wageningen, The Netherlands
- Vogeltrekstation - Dutch Centre for Avian Migration and Demography, Netherlands Institute of Ecology (NIOO-KNAW), Wageningen, The Netherlands
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7
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Shirdhankar RN, Malkemper EP. Cognitive maps and the magnetic sense in vertebrates. Curr Opin Neurobiol 2024; 86:102880. [PMID: 38657284 DOI: 10.1016/j.conb.2024.102880] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/17/2023] [Revised: 03/04/2024] [Accepted: 04/02/2024] [Indexed: 04/26/2024]
Abstract
Navigation requires a network of neurons processing inputs from internally generated cues and external landmarks. Most studies on the neuronal basis of navigation in vertebrates have focused on rats and mice and the canonical senses vision, hearing, olfaction, and somatosensation. Some animals have evolved the ability to sense the Earth's magnetic field and use it for orientation. It can be expected that in these animals magnetic cues are integrated with other sensory cues in the cognitive map. We provide an overview of the behavioral evidence and brain regions involved in magnetic sensing in support of this idea, hoping that this will guide future experiments.
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Affiliation(s)
- Runita N Shirdhankar
- Research Group Neurobiology of Magnetoreception, Max Planck Institute for Neurobiology of Behavior - Caesar, Ludwig-Erhard-Allee 2, Bonn 53175, Germany; International Max Planck Research School for Brain and Behavior, Bonn, Germany
| | - E Pascal Malkemper
- Research Group Neurobiology of Magnetoreception, Max Planck Institute for Neurobiology of Behavior - Caesar, Ludwig-Erhard-Allee 2, Bonn 53175, Germany.
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8
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Zhou X, Zhang L, Zhang P, Xu H, Song J, Chang Y, Cai T, Xie C. Comparative transcriptomic analysis revealed important processes underlying the static magnetic field effects on Arabidopsis. FRONTIERS IN PLANT SCIENCE 2024; 15:1390031. [PMID: 38863539 PMCID: PMC11165219 DOI: 10.3389/fpls.2024.1390031] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 02/22/2024] [Accepted: 05/07/2024] [Indexed: 06/13/2024]
Abstract
Static magnetic field (SMF) plays important roles in various biological processes of many organisms including plants, though the molecular mechanism remains largely unclear. Here in this study, we evaluated different magnetic setups to test their effects on growth and development on Arabidopsis (Arabidopsis thaliana), and discovered that plant growth was significantly enhanced by inhomogeneous SMF generated by a regular triangular prism magnet perpendicular to the direction of gravity. Comparative transcriptomic analysis revealed that auxin synthesis and signal transduction genes were upregulated by SMF exposure. SMF also facilitated plants to maintain the iron homeostasis. The expression of iron metabolism-related genes was downregulated by SMF, however, the iron content in plant tissues remains relatively unchanged. Furthermore, SMF exposure also helped the plants to reduce ROS level and synergistically maintain the oxidant balance by enhanced activity of antioxidant enzymes and accumulation of nicotinamide. Taken together, our data suggested that SMF is involved in regulating the growth and development of Arabidopsis thaliana through maintaining iron homeostasis and balancing oxidative stress, which could be beneficial for plant survival and growth. The work presented here would extend our understanding of the mechanism and the regulatory network of how magnetic field affects the plant growth, which would provide insights into the development of novel plant synthetic biology technologies to engineer stress-resistant and high-yielding crops.
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Affiliation(s)
- Xiujuan Zhou
- High Magnetic Field Laboratory, Hefei Institutes of Physical Science, Chinese Academy of Sciences, Science Island, Hefei, China
- Science Island Branch of Graduate School, University of Science and Technology of China, Hefei, China
| | - Lin Zhang
- High Magnetic Field Laboratory, Hefei Institutes of Physical Science, Chinese Academy of Sciences, Science Island, Hefei, China
| | - Peng Zhang
- High Magnetic Field Laboratory, Hefei Institutes of Physical Science, Chinese Academy of Sciences, Science Island, Hefei, China
- Science Island Branch of Graduate School, University of Science and Technology of China, Hefei, China
| | - Hang Xu
- Hainan Key Laboratory for Sustainable Utilization of Tropical Bioresource, College of Tropical Crops, Hainan University, Haikou, China
- Sanya Nanfan Research Institute of Hainan University, Hainan Yazhou Bay Seed Laboratory, Sanya, China
| | - Jialei Song
- High Magnetic Field Laboratory, Hefei Institutes of Physical Science, Chinese Academy of Sciences, Science Island, Hefei, China
- Science Island Branch of Graduate School, University of Science and Technology of China, Hefei, China
| | - Yafei Chang
- High Magnetic Field Laboratory, Hefei Institutes of Physical Science, Chinese Academy of Sciences, Science Island, Hefei, China
- Science Island Branch of Graduate School, University of Science and Technology of China, Hefei, China
| | - Tiantian Cai
- High Magnetic Field Laboratory, Hefei Institutes of Physical Science, Chinese Academy of Sciences, Science Island, Hefei, China
- Science Island Branch of Graduate School, University of Science and Technology of China, Hefei, China
- Institute of Quantum Sensing, Zhejiang University, Hangzhou, China
| | - Can Xie
- High Magnetic Field Laboratory, Hefei Institutes of Physical Science, Chinese Academy of Sciences, Science Island, Hefei, China
- Science Island Branch of Graduate School, University of Science and Technology of China, Hefei, China
- Institute of Quantum Sensing, Zhejiang University, Hangzhou, China
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9
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Karwinkel T, Winklhofer M, Allenstein D, Brust V, Christoph P, Holland RA, Hüppop O, Steen J, Bairlein F, Schmaljohann H. A refined magnetic pulse treatment method for magnetic navigation experiments with adequate sham control: a case study on free-flying songbirds. J R Soc Interface 2024; 21:20230745. [PMID: 38745460 DOI: 10.1098/rsif.2023.0745] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/14/2023] [Accepted: 04/18/2024] [Indexed: 05/16/2024] Open
Abstract
Migratory songbirds may navigate by extracting positional information from the geomagnetic field, potentially with a magnetic-particle-based receptor. Previous studies assessed this hypothesis experimentally by exposing birds to a strong but brief magnetic pulse aimed at remagnetizing the particles and evoking an altered behaviour. Critically, such studies were not ideally designed because they lacked an adequate sham treatment controlling for the induced electric field that is fundamentally associated with a magnetic pulse. Consequently, we designed a sham-controlled magnetic-pulse experiment, with sham and treatment pulse producing a similar induced electric field, while limiting the sham magnetic field to a value that is deemed insufficient to remagnetize particles. We tested this novel approach by pulsing more than 250 wild, migrating European robins (Erithacus rubecula) during two autumn seasons. After pulsing them, five traits of free-flight migratory behaviour were observed, but no effect of the pulse could be found. Notably, one of the traits, the migratory motivation of adults, was significantly affected in only one of the two study years. Considering the problem of reproducing experiments with wild animals, we recommend a multi-year approach encompassing large sample size, blinded design and built-in sham control to obtain future insights into the role of magnetic-particle-based magnetoreception in bird navigation.
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Affiliation(s)
- Thiemo Karwinkel
- Institute of Avian Research 'Vogelwarte Helgoland', An der Vogelwarte 21, 26386 Wilhelmshaven, Germany
- School of Mathematics and Science, Institute of Biology and Environmental Sciences, Carl von Ossietzky Universität Oldenburg, Ammerländer Heerstraße 114-118, Oldenburg 26129, Germany
| | - Michael Winklhofer
- School of Mathematics and Science, Institute of Biology and Environmental Sciences, Carl von Ossietzky Universität Oldenburg, Ammerländer Heerstraße 114-118, Oldenburg 26129, Germany
- Research Center for Neurosensory Sciences, Carl von Ossietzky Universität Oldenburg, Ammerländer Heerstraße 114-118, Oldenburg 26129, Germany
| | - Dario Allenstein
- Institute of Avian Research 'Vogelwarte Helgoland', An der Vogelwarte 21, 26386 Wilhelmshaven, Germany
- School of Mathematics and Science, Institute of Biology and Environmental Sciences, Carl von Ossietzky Universität Oldenburg, Ammerländer Heerstraße 114-118, Oldenburg 26129, Germany
| | - Vera Brust
- Institute of Avian Research 'Vogelwarte Helgoland', An der Vogelwarte 21, 26386 Wilhelmshaven, Germany
| | - Paula Christoph
- Institute of Avian Research 'Vogelwarte Helgoland', An der Vogelwarte 21, 26386 Wilhelmshaven, Germany
- School of Mathematics and Science, Institute of Biology and Environmental Sciences, Carl von Ossietzky Universität Oldenburg, Ammerländer Heerstraße 114-118, Oldenburg 26129, Germany
- Institute of Landscape Ecology, Westfälische Wilhelms-Universität Münster, Heisenbergstr. 2, Münster 48149, Germany
| | - Richard A Holland
- School of Environmental and Natural Sciences, University of Bangor, Deiniol Road, Bangor LL57 2UW, UK
| | - Ommo Hüppop
- Institute of Avian Research 'Vogelwarte Helgoland', An der Vogelwarte 21, 26386 Wilhelmshaven, Germany
| | - Jan Steen
- Institute of Avian Research 'Vogelwarte Helgoland', An der Vogelwarte 21, 26386 Wilhelmshaven, Germany
- Institute of Landscape Ecology, Westfälische Wilhelms-Universität Münster, Heisenbergstr. 2, Münster 48149, Germany
| | - Franz Bairlein
- Institute of Avian Research 'Vogelwarte Helgoland', An der Vogelwarte 21, 26386 Wilhelmshaven, Germany
- Max Planck Institute of Animal Behavior, Am Obstberg 1, Radolfzell 78315, Germany
| | - Heiko Schmaljohann
- Institute of Avian Research 'Vogelwarte Helgoland', An der Vogelwarte 21, 26386 Wilhelmshaven, Germany
- School of Mathematics and Science, Institute of Biology and Environmental Sciences, Carl von Ossietzky Universität Oldenburg, Ammerländer Heerstraße 114-118, Oldenburg 26129, Germany
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10
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Zupanc GKH, Homberg U, Rössler W, Warrant EJ, Arikawa K, Simmons AM, Helfrich-Förster C. Getting a glimpse into the sensory worlds of animals: the Editors' and Readers' Choice Awards 2024. J Comp Physiol A Neuroethol Sens Neural Behav Physiol 2024; 210:347-351. [PMID: 38722557 DOI: 10.1007/s00359-024-01703-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/21/2024]
Abstract
The Editors' and Readers' Choice Awards were established in 2022 to celebrate some of the outstanding articles published every year in the Journal of Comparative Physiology A. The recipients of the 2024 Editors' Choice Awards were selected based on votes cast by the Editorial Board on articles published in 2023. In the category Original Paper, this distinction goes to 'Views from 'crabworld': the spatial distribution of light in a tropical mudflat' by Jochen Zeil (J Comp Physiol A 209:859-876, 2023); and in the category Review Article to 'Olfactory navigation in arthropods' by Theresa J. Steele and colleagues (J Comp Physiol A 209:467-488, 2023). The winners of the 2024 Readers' Choice Awards were determined by the number of online accesses of articles published in 2022. In the category Original Paper, the winner is 'Broadband 75-85 MHz radiofrequency fields disrupt magnetic compass orientation in night‑migratory songbirds consistent with a flavin‑based radical pair magnetoreceptor' by Bo Leberecht and colleagues (J Comp Physiol A 208:97-106, 2022). In the category Review Article, the winner is 'Magnetic maps in animal navigation' by Kenneth J. Lohmann and colleagues (J Comp Physiol A 208:41-67, 2022), which already won the Editors' Choice Award in 2023.
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Affiliation(s)
| | - Uwe Homberg
- Department of Biology, Philipps-University of Marburg, 35032, Marburg, Germany
| | - Wolfgang Rössler
- Behavioral Physiology and Sociobiology (Zoology II), Biocenter, University of Würzburg, 97074, Würzburg, Germany
| | - Eric J Warrant
- Department of Biology, University of Lund, Lund, 22362, Sweden
| | - Kentaro Arikawa
- Research Center for Integrative Evolutionary Science, SOKENDAI (The Graduate University for Advanced Studies), Hayama, Kanagawa, 240-0115, Japan
| | - Andrea Megela Simmons
- Department of Cognitive, Linguistic and Psychological Sciences, Brown University, Providence, RI, 02912, USA
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11
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Schuhmann F, Ramsay JL, Kattnig DR, Solov’yov IA. Structural Rearrangements of Pigeon Cryptochrome 4 Undergoing a Complete Redox Cycle. J Phys Chem B 2024; 128:3844-3855. [PMID: 38568745 PMCID: PMC11056986 DOI: 10.1021/acs.jpcb.4c00424] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/20/2024] [Revised: 03/04/2024] [Accepted: 03/11/2024] [Indexed: 04/26/2024]
Abstract
Cryptochrome is currently the major contender of a protein to underpin magnetoreception, the ability to sense the Earth's magnetic field. Among various types of cryptochromes, cryptochrome 4 has been identified as the likely magnetoreceptor in migratory birds. All-atom molecular dynamics (MD) studies have offered first insights into the structural dynamics of cryptochrome but are limited to a short time scale due to large computational demands. Here, we employ coarse-grained MD simulations to investigate the emergence of long-lived states and conformational changes in pigeon cryptochrome 4. Our coarse-grained simulations complete the picture by permitting observation on a significantly longer time scale. We observe conformational transitions in the phosphate-binding loop of pigeon cryptochrome 4 upon activation and identify prominent motions in residues 440-460, suggesting a possible role as a signaling state of the protein or as a gated interaction site for forming protein complexes that might facilitate downstream processes. The findings highlight the importance of considering longer time scales in studying cryptochrome dynamics and magnetoreception. Coarse-grained MD simulations offer a valuable tool to unravel the complex behavior of cryptochrome proteins and shed new light on the mechanisms underlying their role in magnetoreception. Further exploration of these conformational changes and their functional implications may contribute to a deeper understanding of the molecular mechanisms of magnetoreception in birds.
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Affiliation(s)
- Fabian Schuhmann
- Institute
of Physics, Carl von Ossietzky Universität
Oldenburg, Carl-von-Ossietzky Str. 9-11, Oldenburg 26129, Germany
- Niels
Bohr International Academy, Niels Bohr Institute, University of Copenhagen, Blegdamsvej 17, Copenhagen 2100, Denmark
| | - Jessica L. Ramsay
- Living
Systems Institute and Department of Physics, University of Exeter, Stocker Rd., Exeter EX4
4QD, U.K.
| | - Daniel R. Kattnig
- Living
Systems Institute and Department of Physics, University of Exeter, Stocker Rd., Exeter EX4
4QD, U.K.
| | - Ilia A. Solov’yov
- Institute
of Physics, Carl von Ossietzky Universität
Oldenburg, Carl-von-Ossietzky Str. 9-11, Oldenburg 26129, Germany
- Research
Centre for Neurosensory Science, Carl von
Ossietzky Universität Oldenburg, Carl-von-Ossietzky-Str. 9-11, Oldenburg 26129, Germany
- Center
for Nanoscale Dynamics (CENAD), Carl von
Ossietzky Universität Oldenburg, Ammerländer Heerstr. 114-118, Oldenburg 26129, Germany
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12
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Frederiksen A, Aldag M, Solov’yov IA, Gerhards L. Activation of Cryptochrome 4 from Atlantic Herring. BIOLOGY 2024; 13:262. [PMID: 38666874 PMCID: PMC11048568 DOI: 10.3390/biology13040262] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/15/2024] [Revised: 04/04/2024] [Accepted: 04/11/2024] [Indexed: 04/28/2024]
Abstract
Marine fish migrate long distances up to hundreds or even thousands of kilometers for various reasons that include seasonal dependencies, feeding, or reproduction. The ability to perceive the geomagnetic field, called magnetoreception, is one of the many mechanisms allowing some fish to navigate reliably in the aquatic realm. While it is believed that the photoreceptor protein cryptochrome 4 (Cry4) is the key component for the radical pair-based magnetoreception mechanism in night migratory songbirds, the Cry4 mechanism in fish is still largely unexplored. The present study aims to investigate properties of the fish Cry4 protein in order to understand the potential involvement in a radical pair-based magnetoreception. Specifically, a computationally reconstructed atomistic model of Cry4 from the Atlantic herring (Clupea harengus) was studied employing classical molecular dynamics (MD) and quantum mechanics/molecular mechanics (QM/MM) methods to investigate internal electron transfers and the radical pair formation. The QM/MM simulations reveal that electron transfers occur similarly to those found experimentally and computationally in Cry4 from European robin (Erithacus rubecula). It is therefore plausible that the investigated Atlantic herring Cry4 has the physical and chemical properties to form radical pairs that in turn could provide fish with a radical pair-based magnetic field compass sensor.
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Affiliation(s)
- Anders Frederiksen
- Institute of Physics, Carl von Ossietzky University of Oldenburg, Carl-von-Ossietzky Straße 9-11, 26129 Oldenburg, Germany; (A.F.); (M.A.); (I.A.S.)
| | - Mandus Aldag
- Institute of Physics, Carl von Ossietzky University of Oldenburg, Carl-von-Ossietzky Straße 9-11, 26129 Oldenburg, Germany; (A.F.); (M.A.); (I.A.S.)
| | - Ilia A. Solov’yov
- Institute of Physics, Carl von Ossietzky University of Oldenburg, Carl-von-Ossietzky Straße 9-11, 26129 Oldenburg, Germany; (A.F.); (M.A.); (I.A.S.)
- Research Centre for Neurosensory Sciences, Carl von Ossietzky University of Oldenburg, Carl-von-Ossietzky Straße 9-11, 26129 Oldenburg, Germany
- Center for Nanoscale Dynamics (CENAD), Carl von Ossietzky University of Oldenburg, Ammerländer Heerstr. 114-118, 26129 Oldenburg, Germany
| | - Luca Gerhards
- Institute of Physics, Carl von Ossietzky University of Oldenburg, Carl-von-Ossietzky Straße 9-11, 26129 Oldenburg, Germany; (A.F.); (M.A.); (I.A.S.)
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13
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Hermans A, Winter HV, Gill AB, Murk AJ. Do electromagnetic fields from subsea power cables effect benthic elasmobranch behaviour? A risk-based approach for the Dutch Continental Shelf. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2024; 346:123570. [PMID: 38360387 DOI: 10.1016/j.envpol.2024.123570] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/24/2023] [Revised: 02/11/2024] [Accepted: 02/12/2024] [Indexed: 02/17/2024]
Abstract
Subsea power cables cause electromagnetic fields (EMFs) into the marine environment. Elasmobranchs (rays, skates, sharks) are particularly sensitive to EMFs as they use electromagnetic-receptive sensory systems for orientation, navigation, and locating conspecifics or buried prey. Cables may intersect with egg laying sites, mating, pupping, and nursery grounds, foraging habitat and migration routes of elasmobranchs and the effects of encountering EMFs on species of elasmobranchs are largely unknown. Demonstrated behavioural effects are attraction, disturbance and indifference, depending on EMF characteristics, exposed life stage, exposure level and duration. We estimated exposure levels of elasmobranchs to subsea power cable EMFs, based on modelled magnetic fields in the Dutch Continental Shelf and compared these to reported elasmobranch sensory sensitivity ranges and experimental effect levels. We conclude that the risk from subsea power cables has a large uncertainty and varies per life stage and species ecology. Based on estimated no-observed effect levels (from 10-3 to 10-1 μT) we discuss what will probably be the most affected species and life stage for six common benthic elasmobranchs in the Southern North Sea. We then identify critical knowledge gaps for reducing the uncertainty in the risk assessments for EMFs effects on benthic elasmobranchs.
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Affiliation(s)
- Annemiek Hermans
- Marine Animal Ecology Group, Wageningen University, P.O. Box 338, 6700 AH, Wageningen, the Netherlands.
| | - Hendrik V Winter
- Wageningen Marine Research, Wageningen University and Research, P.O. 68, 1970 AB, IJmuiden, the Netherlands
| | - Andrew B Gill
- Cefas, Centre for Environment, Fisheries and Aquaculture Science, Lowestoft, Suffolk, NR33 0HT, UK
| | - Albertinka J Murk
- Marine Animal Ecology Group, Wageningen University, P.O. Box 338, 6700 AH, Wageningen, the Netherlands
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14
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Cellini A, Shankar MK, Nimmrich A, Hunt LA, Monrroy L, Mutisya J, Furrer A, Beale EV, Carrillo M, Malla TN, Maj P, Vrhovac L, Dworkowski F, Cirelli C, Johnson PJM, Ozerov D, Stojković EA, Hammarström L, Bacellar C, Standfuss J, Maj M, Schmidt M, Weinert T, Ihalainen JA, Wahlgren WY, Westenhoff S. Directed ultrafast conformational changes accompany electron transfer in a photolyase as resolved by serial crystallography. Nat Chem 2024; 16:624-632. [PMID: 38225270 PMCID: PMC10997514 DOI: 10.1038/s41557-023-01413-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/18/2023] [Accepted: 11/28/2023] [Indexed: 01/17/2024]
Abstract
Charge-transfer reactions in proteins are important for life, such as in photolyases which repair DNA, but the role of structural dynamics remains unclear. Here, using femtosecond X-ray crystallography, we report the structural changes that take place while electrons transfer along a chain of four conserved tryptophans in the Drosophila melanogaster (6-4) photolyase. At femto- and picosecond delays, photoreduction of the flavin by the first tryptophan causes directed structural responses at a key asparagine, at a conserved salt bridge, and by rearrangements of nearby water molecules. We detect charge-induced structural changes close to the second tryptophan from 1 ps to 20 ps, identifying a nearby methionine as an active participant in the redox chain, and from 20 ps around the fourth tryptophan. The photolyase undergoes highly directed and carefully timed adaptations of its structure. This questions the validity of the linear solvent response approximation in Marcus theory and indicates that evolution has optimized fast protein fluctuations for optimal charge transfer.
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Affiliation(s)
- Andrea Cellini
- Department of Chemistry and Molecular Biology, University of Gothenburg, Gothenburg, Sweden
| | - Madan Kumar Shankar
- Department of Chemistry and Molecular Biology, University of Gothenburg, Gothenburg, Sweden
- Department of Chemistry - BMC, Uppsala University, Uppsala, Sweden
| | - Amke Nimmrich
- Department of Chemistry and Molecular Biology, University of Gothenburg, Gothenburg, Sweden
- Department of Chemistry, University of Washington, Seattle, WA, USA
| | - Leigh Anna Hunt
- Department of Chemistry - Ångström Laboratory, Uppsala University, Uppsala, Sweden
| | - Leonardo Monrroy
- Department of Chemistry - BMC, Uppsala University, Uppsala, Sweden
| | - Jennifer Mutisya
- Department of Chemistry and Molecular Biology, University of Gothenburg, Gothenburg, Sweden
- Department of Chemistry - BMC, Uppsala University, Uppsala, Sweden
| | | | | | | | - Tek Narsingh Malla
- Physics Department, University of Wisconsin-Milwaukee, Milwaukee, WI, USA
| | - Piotr Maj
- Department of Chemistry and Molecular Biology, University of Gothenburg, Gothenburg, Sweden
- Department of Chemistry - BMC, Uppsala University, Uppsala, Sweden
| | - Lidija Vrhovac
- Department of Chemistry and Molecular Biology, University of Gothenburg, Gothenburg, Sweden
- Department of Chemistry - BMC, Uppsala University, Uppsala, Sweden
| | | | | | | | | | - Emina A Stojković
- Department of Biology, Northeastern Illinois University, Chicago, IL, USA
| | - Leif Hammarström
- Department of Chemistry - Ångström Laboratory, Uppsala University, Uppsala, Sweden
| | | | | | - Michał Maj
- Department of Chemistry - Ångström Laboratory, Uppsala University, Uppsala, Sweden
| | - Marius Schmidt
- Physics Department, University of Wisconsin-Milwaukee, Milwaukee, WI, USA
| | | | - Janne A Ihalainen
- Department of Biological and Environmental Sciences, Nanoscience Center, University of Jyvaskyla, Jyvaskyla, Finland
| | - Weixiao Yuan Wahlgren
- Department of Chemistry and Molecular Biology, University of Gothenburg, Gothenburg, Sweden
- Department of Chemistry and Molecular Biology and the Swedish NMR Centre, University of Gothenburg, Gothenburg, Sweden
| | - Sebastian Westenhoff
- Department of Chemistry and Molecular Biology, University of Gothenburg, Gothenburg, Sweden.
- Department of Chemistry - BMC, Uppsala University, Uppsala, Sweden.
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15
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Hamacher C, Degen R, Franke M, Switacz VK, Fleck D, Katreddi RR, Hernandez-Clavijo A, Strauch M, Horio N, Hachgenei E, Spehr J, Liberles SD, Merhof D, Forni PE, Zimmer-Bensch G, Ben-Shaul Y, Spehr M. A revised conceptual framework for mouse vomeronasal pumping and stimulus sampling. Curr Biol 2024; 34:1206-1221.e6. [PMID: 38320553 PMCID: PMC10965388 DOI: 10.1016/j.cub.2024.01.036] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/05/2023] [Revised: 12/15/2023] [Accepted: 01/11/2024] [Indexed: 02/08/2024]
Abstract
The physiological performance of any sensory organ is determined by its anatomy and physical properties. Consequently, complex sensory structures with elaborate features have evolved to optimize stimulus detection. Understanding these structures and their physical nature forms the basis for mechanistic insights into sensory function. Despite its crucial role as a sensor for pheromones and other behaviorally instructive chemical cues, the vomeronasal organ (VNO) remains a poorly characterized mammalian sensory structure. Fundamental principles of its physico-mechanical function, including basic aspects of stimulus sampling, remain poorly explored. Here, we revisit the classical vasomotor pump hypothesis of vomeronasal stimulus uptake. Using advanced anatomical, histological, and physiological methods, we demonstrate that large parts of the lateral mouse VNO are composed of smooth muscle. Vomeronasal smooth muscle tissue comprises two subsets of fibers with distinct topography, structure, excitation-contraction coupling, and, ultimately, contractile properties. Specifically, contractions of a large population of noradrenaline-sensitive cells mediate both transverse and longitudinal lumen expansion, whereas cholinergic stimulation targets an adluminal group of smooth muscle fibers. The latter run parallel to the VNO's rostro-caudal axis and are ideally situated to mediate antagonistic longitudinal constriction of the lumen. This newly discovered arrangement implies a novel mode of function. Single-cell transcriptomics and pharmacological profiling reveal the receptor subtypes involved. Finally, 2D/3D tomography provides non-invasive insight into the intact VNO's anatomy and mechanics, enables measurement of luminal fluid volume, and allows an assessment of relative volume change upon noradrenergic stimulation. Together, we propose a revised conceptual framework for mouse vomeronasal pumping and, thus, stimulus sampling.
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Affiliation(s)
- Christoph Hamacher
- Department of Chemosensation, Institute for Biology II, RWTH Aachen University, 52074 Aachen, Germany
| | - Rudolf Degen
- Department of Chemosensation, Institute for Biology II, RWTH Aachen University, 52074 Aachen, Germany; Research Training Group 2416 MultiSenses - MultiScales, RWTH Aachen University, 52074 Aachen, Germany
| | - Melissa Franke
- Department of Chemosensation, Institute for Biology II, RWTH Aachen University, 52074 Aachen, Germany
| | - Victoria K Switacz
- Department of Chemosensation, Institute for Biology II, RWTH Aachen University, 52074 Aachen, Germany; Research Training Group 2416 MultiSenses - MultiScales, RWTH Aachen University, 52074 Aachen, Germany
| | - David Fleck
- Department of Chemosensation, Institute for Biology II, RWTH Aachen University, 52074 Aachen, Germany
| | - Raghu Ram Katreddi
- Department of Biological Sciences, The RNA Institute, University at Albany, Albany, NY 12222, USA
| | - Andres Hernandez-Clavijo
- Department of Chemosensation, Institute for Biology II, RWTH Aachen University, 52074 Aachen, Germany
| | - Martin Strauch
- Institute of Imaging and Computer Vision, RWTH Aachen University, 52074 Aachen, Germany
| | - Nao Horio
- Howard Hughes Medical Institute, Department of Cell Biology, Harvard Medical School, Boston, MA 02115, USA
| | - Enno Hachgenei
- Department of Production Metrology, Fraunhofer Institute for Production Technology, 52074 Aachen, Germany
| | - Jennifer Spehr
- Department of Chemosensation, Institute for Biology II, RWTH Aachen University, 52074 Aachen, Germany
| | - Stephen D Liberles
- Howard Hughes Medical Institute, Department of Cell Biology, Harvard Medical School, Boston, MA 02115, USA
| | - Dorit Merhof
- Research Training Group 2416 MultiSenses - MultiScales, RWTH Aachen University, 52074 Aachen, Germany; Institute of Imaging and Computer Vision, RWTH Aachen University, 52074 Aachen, Germany
| | - Paolo E Forni
- Department of Biological Sciences, The RNA Institute, University at Albany, Albany, NY 12222, USA
| | - Geraldine Zimmer-Bensch
- Research Training Group 2416 MultiSenses - MultiScales, RWTH Aachen University, 52074 Aachen, Germany; Department of Neuroepigenetics, Institute for Biology II, RWTH Aachen University, 52074 Aachen, Germany
| | - Yoram Ben-Shaul
- Department of Medical Neurobiology, Institute for Medical Research Israel Canada, Faculty of Medicine, The Hebrew University of Jerusalem, Jerusalem 9112102, Israel
| | - Marc Spehr
- Department of Chemosensation, Institute for Biology II, RWTH Aachen University, 52074 Aachen, Germany; Research Training Group 2416 MultiSenses - MultiScales, RWTH Aachen University, 52074 Aachen, Germany.
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16
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Gill JP, Taylor BK. Navigation by magnetic signatures in a realistic model of Earth's magnetic field. BIOINSPIRATION & BIOMIMETICS 2024; 19:036006. [PMID: 38452388 DOI: 10.1088/1748-3190/ad3120] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/19/2024] [Accepted: 03/07/2024] [Indexed: 03/09/2024]
Abstract
Certain animal species use the Earth's magnetic field (i.e. magnetoreception) alongside their other sensory modalities to navigate long distances that include continents and oceans. It is hypothesized that several animals use geomagnetic parameters, such as field intensity and inclination, to recognize specific locations or regions, potentially enabling migration without a pre-surveyed map. However, it is unknown how animals use geomagnetic information to generate guidance commands, or where in the world this type of strategy would maximize an animal's fitness. While animal experiments have been invaluable in advancing this area, the phenomenon is difficult to studyin vivoorin situ, especially on the global scale where the spatial layout of the geomagnetic field is not constant. Alongside empirical animal experiments, mathematical modeling and simulation are complementary tools that can be used to investigate animal navigation on a global scale, providing insights that can be informative across a number of species. In this study, we present a model in which a simulated animal (i.e. agent) navigates via an algorithm which determines travel heading based on local and goal magnetic signatures (here, combinations of geomagnetic intensity and inclination) in a realistic model of Earth's magnetic field. By varying parameters of the navigation algorithm, different regions of the world can be made more or less reliable to navigate. We present a mathematical analysis of the system. Our results show that certain regions can be navigated effectively using this strategy when these parameters are properly tuned, while other regions may require more complex navigational strategies. In a real animal, parameters such as these could be tuned by evolution for successful navigation in the animal's natural range. These results could also help with developing engineered navigation systems that are less reliant on satellite-based methods.
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Affiliation(s)
- Jeffrey P Gill
- Department of Mechanical and Aerospace Engineering, Case Western Reserve University, Cleveland, OH 44106, United States of America
| | - Brian K Taylor
- Department of Mechanical and Aerospace Engineering, Case Western Reserve University, Cleveland, OH 44106, United States of America
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17
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Green DA, Polidori S, Stratton SM. Modular switches shift monarch butterfly migratory flight behavior at their Mexican overwintering sites. iScience 2024; 27:109063. [PMID: 38420583 PMCID: PMC10901092 DOI: 10.1016/j.isci.2024.109063] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/18/2023] [Revised: 01/05/2024] [Accepted: 01/25/2024] [Indexed: 03/02/2024] Open
Abstract
Eastern North American migratory monarch butterflies exhibit migratory behavioral states in fall and spring characterized by sun-dependent oriented flight. However, it is unclear how monarchs transition between these behavioral states at their overwintering site. Using a modified Mouritsen-Frost flight simulator, we confirm individual directionality and compass-based orientation (leading to group orientation) in fall migrants, and also uncover sustained flight propensity and direction-based flight reinforcement as distinctly migratory behavioral traits. By testing monarchs at their Mexican overwintering sites, we show that overwintering monarchs show reduced propensity for sustained flight and lose individual directionality, leading to the loss of group-level orientation. Overwintering fliers orient axially in a time-of-day dependent manner, which may indicate local versus long-distance directional heading. These results support a model of migratory flight behavior in which modular, state-dependent switches for flight propensity and orientation control are highly dynamic and are controlled in season- and location-dependent manners.
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Affiliation(s)
- Delbert A. Green
- Department of Ecology and Evolutionary Biology, University of Michigan—Ann Arbor, 1105 N. University Avenue, Ann Arbor, MI 48109, USA
| | - Sean Polidori
- Department of Ecology and Evolutionary Biology, University of Michigan—Ann Arbor, 1105 N. University Avenue, Ann Arbor, MI 48109, USA
| | - Samuel M. Stratton
- Department of Ecology and Evolutionary Biology, University of Michigan—Ann Arbor, 1105 N. University Avenue, Ann Arbor, MI 48109, USA
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18
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Jiang C, Xu H, Yang L, Liu J, Li Y, Takei K, Xu W. Neuromorphic antennal sensory system. Nat Commun 2024; 15:2109. [PMID: 38453967 PMCID: PMC10920631 DOI: 10.1038/s41467-024-46393-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/16/2023] [Accepted: 02/26/2024] [Indexed: 03/09/2024] Open
Abstract
Insect antennae facilitate the nuanced detection of vibrations and deflections, and the non-contact perception of magnetic or chemical stimuli, capabilities not found in mammalian skin. Here, we report a neuromorphic antennal sensory system that emulates the structural, functional, and neuronal characteristics of ant antennae. Our system comprises electronic antennae sensor with three-dimensional flexible structures that detects tactile and magnetic stimuli. The integration of artificial synaptic devices adsorbed with solution-processable MoS2 nanoflakes enables synaptic processing of sensory information. By emulating the architecture of receptor-neuron pathway, our system realizes hardware-level, spatiotemporal perception of tactile contact, surface pattern, and magnetic field (detection limits: 1.3 mN, 50 μm, 9.4 mT). Vibrotactile-perception tasks involving profile and texture classifications were accomplished with high accuracy (> 90%), surpassing human performance in "blind" tactile explorations. Magneto-perception tasks including magnetic navigation and touchless interaction were successfully completed. Our work represents a milestone for neuromorphic sensory systems and biomimetic perceptual intelligence.
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Affiliation(s)
- Chengpeng Jiang
- Institute of Photoelectronic Thin Film Devices and Technology, Key Laboratory of Photoelectronic Thin Film Devices and Technology of Tianjin, College of Electronic Information and Optical Engineering, Engineering Research Center of Thin Film Photoelectronic Technology of Ministry of Education, Smart Sensing Interdisciplinary Science Center, Nankai University, Tianjin, China
- Shenzhen Research Institute of Nankai University, Shenzhen, China
| | - Honghuan Xu
- Institute of Photoelectronic Thin Film Devices and Technology, Key Laboratory of Photoelectronic Thin Film Devices and Technology of Tianjin, College of Electronic Information and Optical Engineering, Engineering Research Center of Thin Film Photoelectronic Technology of Ministry of Education, Smart Sensing Interdisciplinary Science Center, Nankai University, Tianjin, China
- Shenzhen Research Institute of Nankai University, Shenzhen, China
| | - Lu Yang
- Institute of Photoelectronic Thin Film Devices and Technology, Key Laboratory of Photoelectronic Thin Film Devices and Technology of Tianjin, College of Electronic Information and Optical Engineering, Engineering Research Center of Thin Film Photoelectronic Technology of Ministry of Education, Smart Sensing Interdisciplinary Science Center, Nankai University, Tianjin, China
- Shenzhen Research Institute of Nankai University, Shenzhen, China
| | - Jiaqi Liu
- Institute of Photoelectronic Thin Film Devices and Technology, Key Laboratory of Photoelectronic Thin Film Devices and Technology of Tianjin, College of Electronic Information and Optical Engineering, Engineering Research Center of Thin Film Photoelectronic Technology of Ministry of Education, Smart Sensing Interdisciplinary Science Center, Nankai University, Tianjin, China
- Shenzhen Research Institute of Nankai University, Shenzhen, China
| | - Yue Li
- Institute of Photoelectronic Thin Film Devices and Technology, Key Laboratory of Photoelectronic Thin Film Devices and Technology of Tianjin, College of Electronic Information and Optical Engineering, Engineering Research Center of Thin Film Photoelectronic Technology of Ministry of Education, Smart Sensing Interdisciplinary Science Center, Nankai University, Tianjin, China
- Shenzhen Research Institute of Nankai University, Shenzhen, China
| | - Kuniharu Takei
- Graduate School of Information Science and Technology, Hokkaido University, Sapporo, Japan.
| | - Wentao Xu
- Institute of Photoelectronic Thin Film Devices and Technology, Key Laboratory of Photoelectronic Thin Film Devices and Technology of Tianjin, College of Electronic Information and Optical Engineering, Engineering Research Center of Thin Film Photoelectronic Technology of Ministry of Education, Smart Sensing Interdisciplinary Science Center, Nankai University, Tianjin, China.
- Shenzhen Research Institute of Nankai University, Shenzhen, China.
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19
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Jeffery KJ. The mosaic structure of the mammalian cognitive map. Learn Behav 2024; 52:19-34. [PMID: 38231426 PMCID: PMC10923978 DOI: 10.3758/s13420-023-00618-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 11/27/2023] [Indexed: 01/18/2024]
Abstract
The cognitive map, proposed by Tolman in the 1940s, is a hypothetical internal representation of space constructed by the brain to enable an animal to undertake flexible spatial behaviors such as navigation. The subsequent discovery of place cells in the hippocampus of rats suggested that such a map-like representation does exist, and also provided a tool with which to explore its properties. Single-neuron studies in rodents conducted in small singular spaces have suggested that the map is founded on a metric framework, preserving distances and directions in an abstract representational format. An open question is whether this metric structure pertains over extended, often complexly structured real-world space. The data reviewed here suggest that this is not the case. The emerging picture is that instead of being a single, unified construct, the map is a mosaic of fragments that are heterogeneous, variably metric, multiply scaled, and sometimes laid on top of each other. Important organizing factors within and between fragments include boundaries, context, compass direction, and gravity. The map functions not to provide a comprehensive and precise rendering of the environment but rather to support adaptive behavior, tailored to the species and situation.
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Affiliation(s)
- Kate J Jeffery
- School of Psychology and Neuroscience, College of Medical, Veterinary and Life Sciences, University of Glasgow, Glasgow, UK.
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20
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Beetz MJ. A perspective on neuroethology: what the past teaches us about the future of neuroethology. J Comp Physiol A Neuroethol Sens Neural Behav Physiol 2024; 210:325-346. [PMID: 38411712 PMCID: PMC10995053 DOI: 10.1007/s00359-024-01695-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/13/2023] [Revised: 02/12/2024] [Accepted: 02/13/2024] [Indexed: 02/28/2024]
Abstract
For 100 years, the Journal of Comparative Physiology-A has significantly supported research in the field of neuroethology. The celebration of the journal's centennial is a great time point to appreciate the recent progress in neuroethology and to discuss possible avenues of the field. Animal behavior is the main source of inspiration for neuroethologists. This is illustrated by the huge diversity of investigated behaviors and species. To explain behavior at a mechanistic level, neuroethologists combine neuroscientific approaches with sophisticated behavioral analysis. The rapid technological progress in neuroscience makes neuroethology a highly dynamic and exciting field of research. To summarize the recent scientific progress in neuroethology, I went through all abstracts of the last six International Congresses for Neuroethology (ICNs 2010-2022) and categorized them based on the sensory modalities, experimental model species, and research topics. This highlights the diversity of neuroethology and gives us a perspective on the field's scientific future. At the end, I highlight three research topics that may, among others, influence the future of neuroethology. I hope that sharing my roots may inspire other scientists to follow neuroethological approaches.
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Affiliation(s)
- M Jerome Beetz
- Zoology II, Biocenter, University of Würzburg, 97074, Würzburg, Germany.
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21
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Morandi-Raikova A, Rosa-Salva O, Simdianova A, Vallortigara G, Mayer U. Hierarchical processing of feature, egocentric and relational information for spatial orientation in domestic chicks. J Exp Biol 2024; 227:jeb246447. [PMID: 38323420 DOI: 10.1242/jeb.246447] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/20/2023] [Accepted: 01/29/2024] [Indexed: 02/08/2024]
Abstract
Animals can use different types of information for navigation. Domestic chicks (Gallus gallus) prefer to use local features as a beacon over spatial relational information. However, the role of egocentric navigation strategies is less understood. Here, we tested domestic chicks' egocentric and allocentric orientation abilities in a large circular arena. In experiment 1, we investigated whether domestic chicks possess a side bias during viewpoint-dependent egocentric orientation, revealing facilitation for targets on the chicks' left side. Experiment 2 showed that local features are preferred over viewpoint-dependent egocentric information when the two conflict. Lastly, in experiment 3, we found that in a situation where there is a choice between egocentric and allocentric spatial relational information provided by free-standing objects, chicks preferentially rely on egocentric information. We conclude that chicks orient according to a hierarchy of cues, in which the use of the visual appearance of an object is the dominant strategy, followed by viewpoint-dependent egocentric information and finally by spatial relational information.
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Affiliation(s)
- Anastasia Morandi-Raikova
- Center for Mind/Brain Sciences (CIMeC), University of Trento, Piazza Manifattura 1, I-38068, Rovereto, TN, Italy
| | - Orsola Rosa-Salva
- Center for Mind/Brain Sciences (CIMeC), University of Trento, Piazza Manifattura 1, I-38068, Rovereto, TN, Italy
| | - Aleksandra Simdianova
- Center for Mind/Brain Sciences (CIMeC), University of Trento, Piazza Manifattura 1, I-38068, Rovereto, TN, Italy
| | - Giorgio Vallortigara
- Center for Mind/Brain Sciences (CIMeC), University of Trento, Piazza Manifattura 1, I-38068, Rovereto, TN, Italy
| | - Uwe Mayer
- Center for Mind/Brain Sciences (CIMeC), University of Trento, Piazza Manifattura 1, I-38068, Rovereto, TN, Italy
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22
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Laurien M, Spiecker L, Luhrmann L, Mende L, Dammann W, Clemmesen C, Gerlach G. Time-compensated sun compass in juvenile sprat (Sprattus sprattus) reveals the onset of migratory readiness. J Exp Biol 2024; 227:jeb246188. [PMID: 38291981 DOI: 10.1242/jeb.246188] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/27/2023] [Accepted: 01/22/2024] [Indexed: 02/01/2024]
Abstract
Sprat (Sprattus sprattus) is one of the most commercially exploited fish species in the Baltic Sea and expresses a pronounced seasonal migration pattern. Spawning takes place, among other places, in the Kiel Bight and Kiel Fjord in early summer. Juvenile sprat leave the nursery areas in late summer/early autumn to move to their feeding and overwintering grounds. What kind of orientation mechanisms sprat use for migration is not known yet. This study shows that juvenile sprat can use a time-compensated sun compass, heading towards the northeast, in the direction of their proposed overwintering grounds in Bornholm Basin. The sprats tested at the end of August oriented themselves in the predicted direction, whereas the sprats tested at the beginning of August only showed a random orientation. For the first time, this demonstrates the onset of migratory readiness in juvenile sprat, indicating the preparation for starting their migration.
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Affiliation(s)
- Malien Laurien
- Institute of Biology and Environmental Science, Carl von Ossietzky University Oldenburg, 26111 Oldenburg, Germany
| | - Lisa Spiecker
- Institute of Biology and Environmental Science, Carl von Ossietzky University Oldenburg, 26111 Oldenburg, Germany
| | - Lena Luhrmann
- Institute of Biology and Environmental Science, Carl von Ossietzky University Oldenburg, 26111 Oldenburg, Germany
| | - Lara Mende
- Institute of Biology and Environmental Science, Carl von Ossietzky University Oldenburg, 26111 Oldenburg, Germany
| | - Wiebke Dammann
- Institute of Biology and Environmental Science, Carl von Ossietzky University Oldenburg, 26111 Oldenburg, Germany
| | - Catriona Clemmesen
- Marine Evolutionary Ecology, GEOMAR Helmholtz Centre for Ocean Research Kiel, 24105 Kiel, Germany
| | - Gabriele Gerlach
- Institute of Biology and Environmental Science, Carl von Ossietzky University Oldenburg, 26111 Oldenburg, Germany
- Helmholtz Institute for Functional Marine Biodiversity HIFMB Oldenburg, 26111 Oldenburg, Germany
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23
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Gu Z, Dixon A, Zhan X. Genetics and Evolution of Bird Migration. Annu Rev Anim Biosci 2024; 12:21-43. [PMID: 37906839 DOI: 10.1146/annurev-animal-021122-092239] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/02/2023]
Abstract
Bird migration has long been a subject of fascination for humankind and is a behavior that is both intricate and multifaceted. In recent years, advances in technology, particularly in the fields of genomics and animal tracking, have enabled significant progress in our understanding of this phenomenon. In this review, we provide an overview of the latest advancements in the genetics of bird migration, with a particular focus on genomics, and examine various factors that contribute to the evolution of this behavior, including climate change. Integration of research from the fields of genomics, ecology, and evolution can enhance our comprehension of the complex mechanisms involved in bird migration and inform conservation efforts in a rapidly changing world.
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Affiliation(s)
- Zhongru Gu
- Key Laboratory of Animal Ecology and Conservation Biology, Institute of Zoology, Chinese Academy of Sciences, Beijing, China;
- Cardiff University-Institute of Zoology Joint Laboratory for Biocomplexity Research, Chinese Academy of Sciences, Beijing, China
| | - Andrew Dixon
- Mohamed Bin Zayed Raptor Conservation Fund, Abu Dhabi, United Arab Emirates
| | - Xiangjiang Zhan
- Key Laboratory of Animal Ecology and Conservation Biology, Institute of Zoology, Chinese Academy of Sciences, Beijing, China;
- Cardiff University-Institute of Zoology Joint Laboratory for Biocomplexity Research, Chinese Academy of Sciences, Beijing, China
- Center for Excellence in Animal Evolution and Genetics, Chinese Academy of Sciences, Kunming, China
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24
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Shakhparonov VV, Bolshakova AA, Koblikova EO, Tsoi JA. European common frogs determine migratory direction by inclination magnetic compass and show diurnal variation in orientation. J Exp Biol 2024; 227:jeb246150. [PMID: 38264865 DOI: 10.1242/jeb.246150] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/19/2023] [Accepted: 01/16/2024] [Indexed: 01/25/2024]
Abstract
Animals can use two variants of the magnetic compass: the 'polar compass' or the 'inclination compass'. Among vertebrates, the compass type has been identified for salmon, mole rats, birds, turtles and urodeles. However, no experiments have been conducted to determine the compass variant in anurans. To elucidate this, we performed a series of field and laboratory experiments on males of the European common frog during the spawning season. In field experiments in a large circular arena, we identified the direction of the stereotypic migration axis for a total of 581 frogs caught during migration from river to pond or in a breeding pond. We also found that motivation of the frogs varied throughout the day, probably to avoid deadly night freezes, which are common in spring. The laboratory experiments were conducted on a total of 450 frogs in a T-maze placed in a three-axis Merritt coil system. The maze arms were positioned parallel to the natural migration axis inferred on the basis of magnetic field. Both vertical and horizontal components of the magnetic field were altered, and frogs were additionally tested in a vertical magnetic field. We conclude that European common frogs possess an inclination magnetic compass, as for newts, birds and sea turtles, and potentially use it during the spring migration. The vertical magnetic field confuses the frogs, apparently as a result of the inability to choose a direction. Notably, diurnal variation in motivation of the frogs was identical to that in nature, indicating the presence of internal rhythms controlling this process.
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Affiliation(s)
- Vladimir V Shakhparonov
- Sechenov Institute of Evolutionary Physiology and Biochemistry of the Russian Academy of Sciences, pr. Torez 44, Saint-Petersburg 194223, Russia
- Department of Vertebrate Zoology, Faculty of Biology, Lomonosov Moscow State University, Leninskie gory, 1, k.12, Moscow 119234, Russia
| | - Alisa A Bolshakova
- Department of Vertebrate Zoology, Faculty of Biology, Lomonosov Moscow State University, Leninskie gory, 1, k.12, Moscow 119234, Russia
| | - Eugenia O Koblikova
- Department of Vertebrate Zoology, Faculty of Biology, Lomonosov Moscow State University, Leninskie gory, 1, k.12, Moscow 119234, Russia
| | - Julia A Tsoi
- Department of Vertebrate Zoology, Faculty of Biology, Lomonosov Moscow State University, Leninskie gory, 1, k.12, Moscow 119234, Russia
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25
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Nair PS, Zadeh-Haghighi H, Simon C. Radical pair model for magnetic field effects on NMDA receptor activity. Sci Rep 2024; 14:3628. [PMID: 38351304 PMCID: PMC10864372 DOI: 10.1038/s41598-024-54343-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/25/2023] [Accepted: 02/12/2024] [Indexed: 02/16/2024] Open
Abstract
The N-methyl-D-aspartate receptor is a prominent player in brain development and functioning. Perturbations to its functioning through external stimuli like magnetic fields can potentially affect the brain in numerous ways. Various studies have shown that magnetic fields of varying strengths affect these receptors. We propose that the radical pair mechanism, a quantum mechanical process, could explain some of these field effects. Radicals of the form [Formula: see text], where R is a protein residue that can be Serine or Tyrosine, are considered for this study. The variation in the singlet fractional yield of the radical pairs, as a function of magnetic field strength, is calculated to understand how the magnetic field affects the products of the radical pair reactions. Based on the results, the radical pair mechanism is a likely candidate for explaining the magnetic field effects observed on the receptor activity. The model predicts changes in the behaviour of the system as magnetic field strength is varied and also predicts certain isotope effects. The results further suggest that similar effects on radical pairs could be a plausible explanation for various magnetic field effects within the brain.
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Affiliation(s)
- Parvathy S Nair
- Department of Physics, Indian Institute of Science Education and Research (IISER), Tirupati, Tirupati, Andhra Pradesh, 517507, India.
| | - Hadi Zadeh-Haghighi
- Department of Physics and Astronomy, University of Calgary, Calgary, AB, T2N 1N4, Canada.
- Institute for Quantum Science and Technology, University of Calgary, Calgary, AB, T2N 1N4, Canada.
- Hotchkiss Brain Institute, University of Calgary, Calgary, AB, T2N 1N4, Canada.
| | - Christoph Simon
- Department of Physics and Astronomy, University of Calgary, Calgary, AB, T2N 1N4, Canada.
- Institute for Quantum Science and Technology, University of Calgary, Calgary, AB, T2N 1N4, Canada.
- Hotchkiss Brain Institute, University of Calgary, Calgary, AB, T2N 1N4, Canada.
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26
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Dufour P, Lees AC, Gilroy J, Crochet PA. The overlooked importance of vagrancy in ecology and evolution. Trends Ecol Evol 2024; 39:19-22. [PMID: 37945456 DOI: 10.1016/j.tree.2023.10.001] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/23/2023] [Revised: 10/02/2023] [Accepted: 10/03/2023] [Indexed: 11/12/2023]
Abstract
Vagrancy is the occurrence of individuals outside the normal geographic range of their species. These rare and unpredictable events have long been neglected by the scientific community, belying a growing body of evidence that vagrancy can have an important role in eco-evolutionary processes at both population and community scales.
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Affiliation(s)
- Paul Dufour
- Station Biologique de la Tour du Valat, Arles, France; CEFE, CNRS, University of Montpellier, EPHE, IRD, Montpellier, France.
| | - Alexander C Lees
- Department of Natural Sciences, Manchester Metropolitan University, Manchester M1 5GD, UK; Cornell Lab of Ornithology, Cornell University, Ithaca, NY 14850, USA
| | - James Gilroy
- School of Environmental Sciences, University of East Anglia, Norwich NR4 7TJ, UK
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Vecheck AM, McNamee CM, Reijo Pera R, Usselman RJ. Magnetic Field Intervention Enhances Cellular Migration Rates in Biological Scaffolds. Bioengineering (Basel) 2023; 11:9. [PMID: 38247887 PMCID: PMC10813414 DOI: 10.3390/bioengineering11010009] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/10/2023] [Revised: 12/15/2023] [Accepted: 12/20/2023] [Indexed: 01/23/2024] Open
Abstract
The impact of magnetic fields on cellular function is diverse but can be described at least in part by the radical pair mechanism (RPM), where magnetic field intervention alters reactive oxygen species (ROS) populations and downstream cellular signaling. Here, cellular migration within three-dimensional scaffolds was monitored in an applied oscillating 1.4 MHz radiofrequency (RF) magnetic field with an amplitude of 10 µT and a static 50 µT magnetic field. Given that cellular bioenergetics can be altered based on applied RF magnetic fields, this study focused on a magnetic field configuration that increased cellular respiration. Results suggest that RF accelerated cell clustering and elongation after 1 day, with increased levels of clustering and cellular linkage after 7 days. Cell distribution analysis within the scaffolds revealed that the clustering rate during the first day was increased nearly five times in the RF environment. Electron microscopy provided additional topological information and verified the development of fibrous networks, with a cell-derived matrix (CDM) visualized after 7 days in samples maintained in RF. This work demonstrates time-dependent cellular migration that may be influenced by quantum biology (QB) processes and downstream oxidative signaling, enhancing cellular migration behavior.
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Affiliation(s)
- Amy M. Vecheck
- Department of Biomedical Engineering and Sciences, Florida Institute of Technology, Melbourne, FL 32901, USA
| | - Cameron M. McNamee
- Department of Mathematics, California Institute of Technology, Pasadena, CA 91125, USA
- McLaughlin Research Institute, Great Falls, MT 59405, USA
| | | | - Robert J. Usselman
- Department of Chemistry and Chemical Engineering, Florida Institute of Technology, Melbourne, FL 32901, USA
- Computational Research At Florida Tech (CRAFT), Florida Institute of Technology, Melbourne, FL 32901, USA
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28
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Romanova N, Utvenko G, Prokshina A, Cellarius F, Fedorishcheva A, Pakhomov A. Migratory birds are able to choose the appropriate migratory direction under dim yellow narrowband light. Proc Biol Sci 2023; 290:20232499. [PMID: 38113940 PMCID: PMC10730290 DOI: 10.1098/rspb.2023.2499] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/06/2023] [Accepted: 11/21/2023] [Indexed: 12/21/2023] Open
Abstract
Currently, it is generally assumed that migratory birds are oriented in the appropriate migratory direction under UV, blue and green light (short-wavelength) and are unable to use their magnetic compass in total darkness and under yellow and red light (long-wavelength). However, it has also been suggested that the magnetic compass has two sensitivity peaks: in the short and long wavelengths, but with different intensities. In this project, we aimed to study the orientation of long-distance migrants, pied flycatchers (Ficedula hypoleuca), under different narrowband light conditions during autumn and spring migrations. The birds were tested in the natural magnetic field (NMF) and a changed magnetic field (CMF) rotated counterclockwise by 120° under dim green (autumn) and yellow (spring and autumn) light, which are on the 'threshold' between the short-wavelength and long-wavelength light. We showed that pied flycatchers (i) were completely disoriented under green light both in the NMF and CMF but (ii) showed the migratory direction in the NMF and the appropriate response to CMF under yellow light. Our data contradict the results of previous experiments under narrowband green and yellow light and raise doubts about the existence of only short-wavelength magnetoreception. The parameters of natural light change dramatically in spectral composition and intensity after local sunset, and the avian magnetic compass should be adapted to function properly under such constantly changing light conditions.
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Affiliation(s)
- Nadezhda Romanova
- Moscow State Pedagogical University, 1/1 M. Pirogovskaya St., Moscow 119991, Russia
| | - Gleb Utvenko
- Department of Vertebrate Zoology, St. Petersburg State University, 199034 St. Petersburg, Russia
- Biological Station Rybachy, Zoological Institute RAS, Kaliningrad Region, Rybachy 238535, Russia
| | - Anisia Prokshina
- Department of Vertebrate Zoology, Lomonosov Moscow State University, 119234 Moscow, Russia
| | - Fyodor Cellarius
- Department of Vertebrate Zoology, Lomonosov Moscow State University, 119234 Moscow, Russia
| | | | - Alexander Pakhomov
- Biological Station Rybachy, Zoological Institute RAS, Kaliningrad Region, Rybachy 238535, Russia
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Verhelst P, Westerberg H, Coeck J, Harrison L, Moens T, Reubens J, Van Wichelen J, Righton D. Tidal and circadian patterns of European eel during their spawning migration in the North Sea and the English Channel. THE SCIENCE OF THE TOTAL ENVIRONMENT 2023; 905:167341. [PMID: 37748618 DOI: 10.1016/j.scitotenv.2023.167341] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/23/2023] [Revised: 09/08/2023] [Accepted: 09/22/2023] [Indexed: 09/27/2023]
Abstract
Technological advances in tracking methods enable the mapping of anguillid eel migration routes from continental habitats to their spawning sites in the ocean. However, the behaviour and orientation abilities of anguillids are still poorly understood, and have only rarely been studied on the continental shelf. Here we present the results of a study into the vertical and horizontal movement behaviour of 42 European eels (Anguilla anguilla L.) tagged with electronic tags that migrated through the North Sea and English Channel towards and into the Atlantic Ocean during their spawning migration. We used actograms, periodograms and linear mixed effects models to determine the periodicity and significance of the timing and pattern of vertical movement and activity. Overall, eels had a complex behavioural repertoire that included classical diel vertical migration (DVM), reverse DVM and vertical movement behaviours that synchronized with tidal patterns. All of the eels that were tracked showed one or more of these behaviours during their time at liberty, and many exhibited all of them. We also observed that the eels had a higher horizontal migration speed when the current in the favourable direction was stronger. This, together with the vertical movement synchronized with the tides, suggests the eels adopt selective tidal stream transport. Finally, tracked eels had a higher vertical movement range at night compared to daytime. We hypothesize that these behaviours are driven by bio-energetic efficient movement, navigation and predator avoidance.
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Affiliation(s)
- Pieterjan Verhelst
- Research Institute for Nature and Forest (INBO), Havenlaan 88, bus 73, 1000 Brussels, Belgium; Marine Biology Research Group, Ghent University, Krijgslaan 281, 9000 Ghent, Belgium.
| | - Håkan Westerberg
- Swedish University of Agricultural Sciences (SLU), Institute of Freshwater Research, 178 93 Drottningholm, Sweden
| | - Johan Coeck
- Research Institute for Nature and Forest (INBO), Havenlaan 88, bus 73, 1000 Brussels, Belgium
| | - Lianne Harrison
- Centre for Environment, Fisheries, and Aquaculture Science (Cefas), Pakefield Road, Lowestoft NR33 0HT, UK
| | - Tom Moens
- Marine Biology Research Group, Ghent University, Krijgslaan 281, 9000 Ghent, Belgium
| | - Jan Reubens
- Flanders Marine Institute (VLIZ), Jacobsenstraat 1, 8400 Ostend, Belgium
| | - Jeroen Van Wichelen
- Research Institute for Nature and Forest (INBO), Havenlaan 88, bus 73, 1000 Brussels, Belgium
| | - David Righton
- Centre for Environment, Fisheries, and Aquaculture Science (Cefas), Pakefield Road, Lowestoft NR33 0HT, UK
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30
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Züst Z, Mukhin A, Taylor PD, Schmaljohann H. Pre-migratory flights in migrant songbirds: the ecological and evolutionary importance of understudied exploratory movements. MOVEMENT ECOLOGY 2023; 11:78. [PMID: 38115134 PMCID: PMC10731812 DOI: 10.1186/s40462-023-00440-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/08/2023] [Accepted: 12/09/2023] [Indexed: 12/21/2023]
Abstract
Across the animal kingdom, from honeybees to cranes to beavers, exploratory movements to exploit resources, scout prospective territories, or otherwise gain valuable experiences and information that promote fitness have been documented. For example, exploratory movements to investigate potential dispersal targets have been observed in roe deer, Northern cardinals, and tigers alike. However, despite how widespread these movements are, a cohesive definition of exploratory movements has been lacking. We first provide a clear definition of exploratory movements, and use one particular group-migratory songbirds-to catalogue exploratory movements across the annual cycle. The exceptional mobility of migratory songbirds results in exploratory movements not only at a local scale, but also on a regional scale, both in and out of the breeding season. We review the extent to which these movements are made within this group, paying particular attention to how such movements confer fitness benefits, as by securing high-quality territories, prospecting for extra-pair paternity, or even exploiting ephemeral resources. We then zoom in one step further to a particular exploratory movement that has been, to date, almost completely overlooked within this group: that of pre-migratory flights. These flights, which occur during the transitional period between the stationary breeding period and the onset of migration, occur at night and may not be made by all individuals in a population-reasons why these flights have been heretofore critically understudied. We provide the first definition for this behaviour, summarise the current knowledge of this cryptic movement, and hypothesise what evolutionary/ecological advantages conducting it may confer to the individuals that undertake it. As these flights provide experience to the individuals that undertake them, we expect that birds that make pre-migratory flights are better equipped to survive migration (direct fitness benefits) and, due to orientation/navigation abilities, may also reach preferred territories on breeding and wintering grounds faster (indirect fitness benefits). We hope to encourage ecologists to consider such hidden movements in their research concepts and to enhance the framework of movement ecology by this behaviour due to its presumed high biological importance to the annual cycle of birds.
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Affiliation(s)
- Zephyr Züst
- Institute for Biology and Environmental Sciences (IBU), Carl von Ossietzky Universität Oldenburg, Oldenburg, Germany.
| | - Andrey Mukhin
- Zoological Institute Russian Academy of Science, Biological Station Rybachy, Kaliningrad Oblast, Russia
| | - Philip D Taylor
- Department of Biology, Acadia University, Wolfville, NS, Canada
| | - Heiko Schmaljohann
- Institute for Biology and Environmental Sciences (IBU), Carl von Ossietzky Universität Oldenburg, Oldenburg, Germany
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31
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Chen H, Wan G, Li J, Ma Y, Reynolds DR, Dreyer D, Warrant EJ, Chapman JW, Hu G. Adaptive migratory orientation of an invasive pest on a new continent. iScience 2023; 26:108281. [PMID: 38187194 PMCID: PMC10767162 DOI: 10.1016/j.isci.2023.108281] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/08/2023] [Revised: 10/12/2023] [Accepted: 10/18/2023] [Indexed: 01/09/2024] Open
Abstract
Many species of insects undertake long-range, seasonally reversed migrations, displaying sophisticated orientation behaviors to optimize their migratory trajectories. However, when invasive insects arrive in new biogeographical regions, it is unclear if migrants retain (or how quickly they regain) ancestral migratory traits, such as seasonally preferred flight headings. Here we present behavioral evidence that an invasive migratory pest, the fall armyworm moth (Spodoptera frugiperda), a native of the Americas, exhibited locally adaptive migratory orientation less than three years after arriving on a new continent. Specimens collected from China showed flight orientations directed north-northwest in spring and southwest in autumn, and this would promote seasonal forward and return migrations in East Asia. We also show that the driver of the seasonal switch in orientation direction is photoperiod. Our results thus provide a clear example of an invasive insect that has rapidly exhibited adaptive migratory behaviors, either inherited or newly evolved, in a completely alien environment.
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Affiliation(s)
- Hui Chen
- Department of Entomology, Nanjing Agricultural University, Nanjing 210095, China
- National Key Laboratory of Bio-interactions and Crop Health, Nanjing Agricultural University, Nanjing 210095, China
- Lund Vision Group, Department of Biology, Lund University, Sölvegatan 35, 22362 Lund, Sweden
| | - Guijun Wan
- Department of Entomology, Nanjing Agricultural University, Nanjing 210095, China
- National Key Laboratory of Bio-interactions and Crop Health, Nanjing Agricultural University, Nanjing 210095, China
| | - Jianchun Li
- Department of Entomology, Nanjing Agricultural University, Nanjing 210095, China
- National Key Laboratory of Bio-interactions and Crop Health, Nanjing Agricultural University, Nanjing 210095, China
| | - Yibo Ma
- Department of Entomology, Nanjing Agricultural University, Nanjing 210095, China
- National Key Laboratory of Bio-interactions and Crop Health, Nanjing Agricultural University, Nanjing 210095, China
| | - Don R. Reynolds
- Natural Resources Institute, University of Greenwich, Chatham ME4 4TB, UK
- Rothamsted Research, Harpenden AL5 2JQ, UK
| | - David Dreyer
- Lund Vision Group, Department of Biology, Lund University, Sölvegatan 35, 22362 Lund, Sweden
| | - Eric J. Warrant
- Lund Vision Group, Department of Biology, Lund University, Sölvegatan 35, 22362 Lund, Sweden
| | - Jason W. Chapman
- Department of Entomology, Nanjing Agricultural University, Nanjing 210095, China
- Centre for Ecology and Conservation, University of Exeter, Penryn, Cornwall TR10 9FE, UK
- Environment and Sustainability Institute, University of Exeter, Penryn, Cornwall TR10 9FE, UK
| | - Gao Hu
- Department of Entomology, Nanjing Agricultural University, Nanjing 210095, China
- National Key Laboratory of Bio-interactions and Crop Health, Nanjing Agricultural University, Nanjing 210095, China
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32
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Laforge A, Gaspar P, Barat A, Boyer JT, Candela T, Bourjea J, Ciccione S, Dalleau M, Ballorain K, Monsinjon JR, Bousquet O. Uncovering loggerhead ( Caretta caretta) navigation strategy in the open ocean through the consideration of their diving behaviour. J R Soc Interface 2023; 20:20230383. [PMID: 38086403 PMCID: PMC10715913 DOI: 10.1098/rsif.2023.0383] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/07/2023] [Accepted: 11/22/2023] [Indexed: 12/18/2023] Open
Abstract
While scientists have been monitoring the movements and diving behaviour of sea turtles using Argos platform terminal transmitters for decades, the precise navigational mechanisms used by these animals remain an open question. Until now, active swimming motion has been derived from total motion by subtracting surface or subsurface modelled ocean currents, following the approximation of a quasi-two-dimensional surface layer migration. This study, based on tracking and diving data collected from 25 late-juvenile loggerhead turtles released from Reunion Island during their pre-reproductive migration, demonstrates the importance of considering the subsurface presence of the animals. Using a piecewise constant heading model, we investigate navigation strategy using daily time-at-depth distributions and three-dimensional currents to calculate swimming velocity. Our results are consistent with a map and compass strategy in which swimming movements follow straight courses at a stable swimming speed (approx. 0.5 m s-1), intermittently segmented by course corrections. This strategy, previously hypothesized for post-nesting green and hawksbill turtles, had never been observed in juvenile loggerheads. These results confirm a common open-ocean navigation mechanism across ages and species and highlight the importance of considering diving behaviour in most studies of sea turtle spatial ecology.
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Affiliation(s)
- Antoine Laforge
- Laboratoire de l'Atmosphère et des Cyclones (UMR 8105 LACY), 15 avenue René Cassin, 97715 Saint-Denis, La Réunion, France
- Mercator Ocean International, 2 Av. de l'Aérodrome de Montaudran, 31400 Toulouse, France
| | - Philippe Gaspar
- Mercator Ocean International, 2 Av. de l'Aérodrome de Montaudran, 31400 Toulouse, France
| | - Anne Barat
- Laboratoire de l'Atmosphère et des Cyclones (UMR 8105 LACY), 15 avenue René Cassin, 97715 Saint-Denis, La Réunion, France
| | - Julien Temple Boyer
- Mercator Ocean International, 2 Av. de l'Aérodrome de Montaudran, 31400 Toulouse, France
| | - Tony Candela
- Mercator Ocean International, 2 Av. de l'Aérodrome de Montaudran, 31400 Toulouse, France
- Upwell, Monterey, CA, USA
| | - Jérôme Bourjea
- MARBEC, Univ. Montpellier, CNRS, Ifremer, IRD, Avenue Jean Monnet, Sète 34200, France
| | - Stéphane Ciccione
- Kelonia, l'observatoire des tortues marines, 46 rue du Général de Gaulle, Saint Leu, La Réunion 97436, France
| | - Mayeul Dalleau
- Centre d’Étude et de Découverte des Tortues Marines (CEDTM), 6 Chemin Dubuisson 97436 Saint Leu, La Réunion, France
| | - Katia Ballorain
- Centre d’Étude et de Découverte des Tortues Marines (CEDTM), 6 Chemin Dubuisson 97436 Saint Leu, La Réunion, France
| | - Jonathan R. Monsinjon
- French Research Institute for Exploitation of the Sea (IFREMER) - Indian Ocean Delegation (DOI), Le Port, La Réunion, France
| | - Olivier Bousquet
- Laboratoire de l'Atmosphère et des Cyclones (UMR 8105 LACY), 15 avenue René Cassin, 97715 Saint-Denis, La Réunion, France
- Institute for Coastal and Marine Research, Nelson Mandela University, Port-Elizabeth, South Africa
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33
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Beetz MJ, El Jundi B. The neurobiology of the Monarch butterfly compass. CURRENT OPINION IN INSECT SCIENCE 2023; 60:101109. [PMID: 37660836 DOI: 10.1016/j.cois.2023.101109] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/31/2023] [Revised: 08/17/2023] [Accepted: 08/28/2023] [Indexed: 09/05/2023]
Abstract
Monarch butterflies (Danaus plexippus) have become a superb model system to unravel how the tiny insect brain controls an impressive navigation behavior, such as long-distance migration. Moreover, the ability to compare the neural substrate between migratory and nonmigratory Monarch butterflies provides us with an attractive model to specifically study how the insect brain is adapted for migration. We here review our current progress on the neural substrate of spatial orientation in Monarch butterflies and how their spectacular annual migration might be controlled by their brain. We also discuss open research questions, the answers to which will provide important missing pieces to obtain a full picture of insect migration - from the perception of orientation cues to the neural control of migration.
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Affiliation(s)
- M Jerome Beetz
- Zoology II, Biocenter, University of Würzburg, Würzburg, Germany
| | - Basil El Jundi
- Animal Physiology, Department of Biology, Norwegian University of Science and Technology, Trondheim, Norway.
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34
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Li N, Wang P, Xie Y, Wang B, Zhu C, Xue L, Han X, Gu N, Sun J. Expression of clMagR/clCry4 protein in mBMSCs provides T 2-contrast enhancement of MRI. Acta Biomater 2023; 172:309-320. [PMID: 37778484 DOI: 10.1016/j.actbio.2023.09.039] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/25/2023] [Revised: 09/16/2023] [Accepted: 09/25/2023] [Indexed: 10/03/2023]
Abstract
Here, we propose for the first time the evaluation of magnetosensitive clMagR/clCry4 as a magnetic resonance imaging (MRI) reporter gene that imparts sensitivity to endogenous contrast in eukaryotic organisms. Using a lentiviral vector, we introduced clMagR/clCry4 into C57BL/6 mice-derived bone marrow mesenchymal stem cells (mBMSCs), which could specifically bind with iron, significantly affected MRI transverse relaxation, and generated readily detectable contrast without adverse effects in vivo. Specifically, clMagR/clCry4 makes mBMSCs beneficial for enhancing the sensitivity of MRI-R2 for iron-bearing granules, in which cells recruit exogenous iron and convert these stores into an MRI-detectable contrast; this is not achievable with control cells. Additionally, Prussian blue staining was performed together with ultrathin cell slices to provide direct evidence of natural iron-bearing granules being detectable on MRI. Hence, it was inferred that the sensitivity of MRI detection should be correlated with clMagR/clCry4 and exogenous iron. Taken together, the clMagR/clCry4 has great potential as an MRI reporter gene. STATEMENT OF SIGNIFICANCE: In this study, we propose the evaluation of magnetosensitive clMagR/clCry4 as an MRI reporter gene, imparting detection sensitivity to eukaryotic mBMSCs for endogenous contrast. At this point, the clMagR and clCry4 were located within the cytoplasm and possibly influence each other. The clMagR/clCry4 makes mBMSCs beneficial for enhancing the sensitivity of MRI-R2 for iron-bearing granules, in which protein could specifically bind with iron and convert these stores into MRI-detectable contrast; this is not achieved by control cells. The viewpoint was speculated that the clMagR/clCry4 and exogenous iron were complementary to each other. Additionally, Prussian blue staining was performed together with TEM observations to provide direct evidence that the iron-bearing granules were sensitive to MRI.
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Affiliation(s)
- Nuan Li
- Jiangsu Key Laboratory of Biomaterials and Devices, School of Biological Sciences and Medical Engineering, Southeast University, Nanjing 210096, China
| | - Peng Wang
- Jiangsu Key Laboratory of Biomaterials and Devices, School of Biological Sciences and Medical Engineering, Southeast University, Nanjing 210096, China; Department of Sports Medicine and Adult Reconstructive Surgery, the Affiliated Drum Tower Hospital of Nanjing University, Nanjing 210008, China
| | - Yuanyuan Xie
- Clinical Stem Cell Center, the Affiliated Drum Tower Hospital of Nanjing University, Nanjing 210008, China
| | - Bin Wang
- Clinical Stem Cell Center, the Affiliated Drum Tower Hospital of Nanjing University, Nanjing 210008, China
| | - Chenzhuo Zhu
- Southeast University-Monash University Joint Graduate School, Southeast University, Suzhou 215123, China
| | - Le Xue
- Jiangsu Key Laboratory of Biomaterials and Devices, School of Biological Sciences and Medical Engineering, Southeast University, Nanjing 210096, China
| | - Xiaofeng Han
- School of Biological Sciences and Medical Engineering, Southeast University, Nanjing 210096, China
| | - Ning Gu
- Medical School, Nanjing University, Nanjing 210093, China
| | - Jianfei Sun
- Jiangsu Key Laboratory of Biomaterials and Devices, School of Biological Sciences and Medical Engineering, Southeast University, Nanjing 210096, China.
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35
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Goedeker SJ, Eigel NA, Mann MR, DiBiasio SL, Gall BG. Land Ho! Polarized light serves as a visual signal for landward orientation in displaced spiders. ZOOLOGY 2023; 161:126130. [PMID: 37913717 DOI: 10.1016/j.zool.2023.126130] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/30/2023] [Revised: 10/18/2023] [Accepted: 10/22/2023] [Indexed: 11/03/2023]
Abstract
An organism's ability to identify goals within their environment, orient towards those goals, and successfully navigate to them are critical to all aspects of survival. Long-jawed orb weavers (Tetragnatha elongata) occupy riparian zones and perform orientation behaviors when displaced from this habitat onto the water. Spiders prefer to move toward the closest shoreline, regardless of release location, likely to avoid predation from fish. In this study, we conducted a series of investigations to determine the mechanism by which these spiders rapidly achieve zonal recovery. Occlusion experiments indicate that spiders use visual information to identify characteristics of the riparian habitat and navigate to shelter. While environmental characteristics such as color, contrast, and the sun's position do not appear to factor into this orientation behavior, the polarization of light appears critical. We propose that the polarization of light reflecting off the water's surface acts as a water detector and the absence of such at the edges of the pond (or via experimental induction) serves as a visual reference for the closest suitable habitat.
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Affiliation(s)
| | - Nettie A Eigel
- Department of Biology, Hanover College, Hanover, IN, USA
| | | | | | - Brian G Gall
- Department of Biology, Hanover College, Hanover, IN, USA.
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36
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Hüttner T, von Fersen L, Miersch L, Dehnhardt G. Passive electroreception in bottlenose dolphins (Tursiops truncatus): implication for micro- and large-scale orientation. J Exp Biol 2023; 226:jeb245845. [PMID: 38035544 PMCID: PMC10714143 DOI: 10.1242/jeb.245845] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/20/2023] [Accepted: 10/10/2023] [Indexed: 12/02/2023]
Abstract
For the two dolphin species Sotalia guianensis (Guiana dolphin) and Tursiops truncatus (bottlenose dolphin), previous research has shown that the vibrissal crypts located on the rostrum represent highly innervated, ampullary electroreceptors and that both species are correspondingly sensitive to weak electric fields. In the present study, for a comparative assessment of the sensitivity of the bottlenose dolphin's electroreceptive system, we determined detection thresholds for DC and AC electric fields with two bottlenose dolphins. In a psychophysical experiment, the animals were trained to respond to electric field stimuli using the go/no-go paradigm. We show that the two bottlenose dolphins are able to detect DC electric fields as low as 2.4 and 5.5 µV cm-1, respectively, a detection threshold in the same order of magnitude as those in the platypus and the Guiana dolphin. Detection thresholds for AC fields (1, 5 and 25 Hz) were generally higher than those for DC fields, and the sensitivity for AC fields decreased with increasing frequency. Although the electroreceptive sensitivity of dolphins is lower than that of elasmobranchs, it is suggested that it allows for both micro- and macro-scale orientation. In dolphins pursuing benthic foraging strategies, electroreception may facilitate short-range prey detection and target-oriented snapping of their prey. Furthermore, the ability to detect weak electric fields may enable dolphins to perceive the Earth's magnetic field through induction-based magnetoreception, thus allowing large-scale orientation.
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Affiliation(s)
- Tim Hüttner
- Institute for Biosciences, University of Rostock, Albert-Einstein-Strasse 3, 18059 Rostock, Germany
- Behavioral Ecology and Conservation Lab, Nuremberg Zoo, Am Tiergarten 30, 90480 Nuremberg, Germany
| | - Lorenzo von Fersen
- Behavioral Ecology and Conservation Lab, Nuremberg Zoo, Am Tiergarten 30, 90480 Nuremberg, Germany
| | - Lars Miersch
- Institute for Biosciences, University of Rostock, Albert-Einstein-Strasse 3, 18059 Rostock, Germany
| | - Guido Dehnhardt
- Institute for Biosciences, University of Rostock, Albert-Einstein-Strasse 3, 18059 Rostock, Germany
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37
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Anttonen T, Burghi T, Duvall L, Fernandez MP, Gutierrez G, Kermen F, Merlin C, Michaiel A. Neurobiology and Changing Ecosystems: Mechanisms Underlying Responses to Human-Generated Environmental Impacts. J Neurosci 2023; 43:7530-7537. [PMID: 37940589 PMCID: PMC10634574 DOI: 10.1523/jneurosci.1431-23.2023] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/28/2023] [Accepted: 08/07/2023] [Indexed: 11/10/2023] Open
Abstract
Human generated environmental change profoundly affects organisms that reside across diverse ecosystems. Although nervous systems evolved to flexibly sense, respond, and adapt to environmental change, it is unclear whether the rapid rate of environmental change outpaces the adaptive capacity of complex nervous systems. Here, we explore neural systems mediating responses to, or impacted by, changing environments, such as those induced by global heating, sensory pollution, and changing habitation zones. We focus on rising temperature and accelerated changes in environments that impact sensory experience as examples of perturbations that directly or indirectly impact neural function, respectively. We also explore a mechanism involved in cross-species interactions that arises from changing habitation zones. We demonstrate that anthropogenic influences on neurons, circuits, and behaviors are widespread across taxa and require further scientific investigation to understand principles underlying neural resilience to accelerating environmental change.SIGNIFICANCE STATEMENT Neural systems evolved over hundreds of millions of years to allow organisms to sense and respond to their environments - to be receptive and responsive, yet flexible. Recent rapid, human-generated environmental changes are testing the limits of the adaptive capacity of neural systems. This presents an opportunity and an urgency to understand how neurobiological processes, including molecular, cellular, and circuit-level mechanisms, are vulnerable or resilient to changing environmental conditions. We showcase examples that range from molecular to circuit to behavioral levels of analysis across several model species, framing a broad neuroscientific approach to explore topics of neural adaptation, plasticity, and resilience. We believe this emerging scientific area is of great societal and scientific importance and will provide a unique opportunity to reexamine our understanding of neural adaptation and the mechanisms underlying neural resilience.
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Affiliation(s)
- Tommi Anttonen
- Institute of Biology, University of Southern Denmark, Odense, Denmark DK-5230
| | - Thiago Burghi
- Department of Engineering, University of Cambridge, Cambridge, United Kingdom CB2 1PZ
| | - Laura Duvall
- Department of Biological Sciences, Columbia University, New York City, New York 10027
| | - Maria P Fernandez
- Department of Neuroscience and Behavior, Barnard College, New York City, New York 10027
| | - Gabrielle Gutierrez
- Department of Neuroscience and Behavior, Barnard College, New York City, New York 10027
| | - Florence Kermen
- Department of Neuroscience, University of Copenhagen, Copenhagen, Denmark DK-1165
| | - Christine Merlin
- Department of Biology, Texas A&M University, College Station, Texas 77843
| | - Angie Michaiel
- Department of Life Sciences, The Kavli Foundation, Los Angeles, California 90230
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38
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Thorne LH. Albatrosses orient toward infrasound while foraging. Proc Natl Acad Sci U S A 2023; 120:e2314980120. [PMID: 37812705 PMCID: PMC10589637 DOI: 10.1073/pnas.2314980120] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/11/2023] Open
Affiliation(s)
- Lesley H. Thorne
- School of Marine and Atmospheric Sciences, Stony Brook University, Stony Brook, NY11794-5000
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39
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Gulson-Castillo ER, Van Doren BM, Bui MX, Horton KG, Li J, Moldwin MB, Shedden K, Welling DT, Winger BM. Space weather disrupts nocturnal bird migration. Proc Natl Acad Sci U S A 2023; 120:e2306317120. [PMID: 37812699 PMCID: PMC10589677 DOI: 10.1073/pnas.2306317120] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/18/2023] [Accepted: 08/22/2023] [Indexed: 10/11/2023] Open
Abstract
Space weather, including solar storms, can impact Earth by disturbing the geomagnetic field. Despite the known dependence of birds and other animals on geomagnetic cues for successful seasonal migrations, the potential effects of space weather on organisms that use Earth's magnetic field for navigation have received little study. We tested whether space weather geomagnetic disturbances are associated with disruptions to bird migration at a macroecological scale. We leveraged long-term radar data to characterize the nightly migration dynamics of the nocturnally migrating North American avifauna over 22 y. We then used concurrent magnetometer data to develop a local magnetic disturbance index associated with each radar station (ΔBmax), facilitating spatiotemporally explicit analyses of the relationship between migration and geomagnetic disturbance. After controlling for effects of atmospheric weather and spatiotemporal patterns, we found a 9 to 17% decrease in migration intensity in both spring and fall during severe space weather events. During fall migration, we also found evidence for decreases in effort flying against the wind, which may represent a depression of active navigation such that birds drift more with the wind during geomagnetic disturbances. Effort flying against the wind in the fall was most reduced under both overcast conditions and high geomagnetic disturbance, suggesting that a combination of obscured celestial cues and magnetic disturbance may disrupt navigation. Collectively, our results provide evidence for community-wide avifaunal responses to geomagnetic disturbances driven by space weather during nocturnal migration.
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Affiliation(s)
- Eric R. Gulson-Castillo
- Department of Ecology and Evolutionary Biology, University of Michigan, Ann Arbor, MI48109
- Museum of Zoology, University of Michigan, Ann Arbor, MI48109
| | | | - Michelle X. Bui
- Department of Physics, University of Texas, Arlington, TX76019
| | - Kyle G. Horton
- Department of Fish, Wildlife, and Conservation Biology, Colorado State University, Fort Collins, CO80523
| | - Jing Li
- Department of Statistics, University of Michigan, Ann Arbor, MI48109
| | - Mark B. Moldwin
- Climate and Space Sciences and Engineering, University of Michigan, Ann Arbor, MI48109
| | - Kerby Shedden
- Department of Statistics, University of Michigan, Ann Arbor, MI48109
| | - Daniel T. Welling
- Climate and Space Sciences and Engineering, University of Michigan, Ann Arbor, MI48109
| | - Benjamin M. Winger
- Department of Ecology and Evolutionary Biology, University of Michigan, Ann Arbor, MI48109
- Museum of Zoology, University of Michigan, Ann Arbor, MI48109
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40
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Beetz MJ, Kraus C, El Jundi B. Neural representation of goal direction in the monarch butterfly brain. Nat Commun 2023; 14:5859. [PMID: 37730704 PMCID: PMC10511513 DOI: 10.1038/s41467-023-41526-w] [Citation(s) in RCA: 6] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/21/2022] [Accepted: 09/04/2023] [Indexed: 09/22/2023] Open
Abstract
Neural processing of a desired moving direction requires the continuous comparison between the current heading and the goal direction. While the neural basis underlying the current heading is well-studied, the coding of the goal direction remains unclear in insects. Here, we used tetrode recordings in tethered flying monarch butterflies to unravel how a goal direction is represented in the insect brain. While recording, the butterflies maintained robust goal directions relative to a virtual sun. By resetting their goal directions, we found neurons whose spatial tuning was tightly linked to the goal directions. Importantly, their tuning was unaffected when the butterflies changed their heading after compass perturbations, showing that these neurons specifically encode the goal direction. Overall, we here discovered invertebrate goal-direction neurons that share functional similarities to goal-direction cells reported in mammals. Our results give insights into the evolutionarily conserved principles of goal-directed spatial orientation in animals.
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Affiliation(s)
- M Jerome Beetz
- Zoology II, Biocenter, University of Würzburg, Würzburg, Germany.
| | - Christian Kraus
- Zoology II, Biocenter, University of Würzburg, Würzburg, Germany
- Animal Physiology, Department of Biology, Norwegian University of Science and Technology, Trondheim, Norway
| | - Basil El Jundi
- Zoology II, Biocenter, University of Würzburg, Würzburg, Germany
- Animal Physiology, Department of Biology, Norwegian University of Science and Technology, Trondheim, Norway
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41
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Zhang C, Yang Z, Xue B, Zhuo H, Liao L, Yang X, Zhu Z. Perceiving like a Bat: Hierarchical 3D Geometric-Semantic Scene Understanding Inspired by a Biomimetic Mechanism. Biomimetics (Basel) 2023; 8:436. [PMID: 37754187 PMCID: PMC10526479 DOI: 10.3390/biomimetics8050436] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/05/2023] [Revised: 09/05/2023] [Accepted: 09/13/2023] [Indexed: 09/28/2023] Open
Abstract
Geometric-semantic scene understanding is a spatial intelligence capability that is essential for robots to perceive and navigate the world. However, understanding a natural scene remains challenging for robots because of restricted sensors and time-varying situations. In contrast, humans and animals are able to form a complex neuromorphic concept of the scene they move in. This neuromorphic concept captures geometric and semantic aspects of the scenario and reconstructs the scene at multiple levels of abstraction. This article seeks to reduce the gap between robot and animal perception by proposing an ingenious scene-understanding approach that seamlessly captures geometric and semantic aspects in an unexplored environment. We proposed two types of biologically inspired environment perception methods, i.e., a set of elaborate biomimetic sensors and a brain-inspired parsing algorithm related to scene understanding, that enable robots to perceive their surroundings like bats. Our evaluations show that the proposed scene-understanding system achieves competitive performance in image semantic segmentation and volumetric-semantic scene reconstruction. Moreover, to verify the practicability of our proposed scene-understanding method, we also conducted real-world geometric-semantic scene reconstruction in an indoor environment with our self-developed drone.
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Affiliation(s)
| | - Zhong Yang
- College of Automation Engineering, Nanjing University of Aeronautics and Astronautics, Nanjing 211106, China; (C.Z.)
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42
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Golesworthy MJ, Zollitsch T, Luo J, Selby D, Jarocha LE, Henbest KB, Paré-Labrosse O, Bartölke R, Schmidt J, Xu J, Mouritsen H, Hore PJ, Timmel CR, Mackenzie SR. Singlet-triplet dephasing in radical pairs in avian cryptochromes leads to time-dependent magnetic field effects. J Chem Phys 2023; 159:105102. [PMID: 37694754 DOI: 10.1063/5.0166675] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/06/2023] [Accepted: 08/21/2023] [Indexed: 09/12/2023] Open
Abstract
Cryptochrome 4a (Cry4a) has been proposed as the sensor at the heart of the magnetic compass in migratory songbirds. Blue-light excitation of this protein produces magnetically sensitive flavin-tryptophan radical pairs whose properties suggest that Cry4a could indeed be suitable as a magnetoreceptor. Here, we use cavity ring-down spectroscopy to measure magnetic field effects on the kinetics of these radical pairs in modified Cry4a proteins from the migratory European robin and from nonmigratory pigeon and chicken. B1/2, a parameter that characterizes the magnetic field-dependence of the reactions, was found to be larger than expected on the basis of hyperfine interactions and to increase with the delay between pump and probe laser pulses. Semiclassical spin dynamics simulations show that this behavior is consistent with a singlet-triplet dephasing (STD) relaxation mechanism. Analysis of the experimental data gives dephasing rate constants, rSTD, in the range 3-6 × 107 s-1. A simple "toy" model due to Maeda, Miura, and Arai [Mol. Phys. 104, 1779-1788 (2006)] is used to shed light on the origin of the time-dependence and the nature of the STD mechanism. Under the conditions of the experiments, STD results in an exponential approach to spin equilibrium at a rate considerably slower than rSTD. We attribute the loss of singlet-triplet coherence to electron hopping between the second and third tryptophans of the electron transfer chain and comment on whether this process could explain differences in the magnetic sensitivity of robin, chicken, and pigeon Cry4a's.
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Affiliation(s)
| | - Tilo Zollitsch
- Department of Chemistry, University of Oxford, Oxford, United Kingdom
| | - Jiate Luo
- Department of Chemistry, University of Oxford, Oxford, United Kingdom
| | - Dan Selby
- Department of Chemistry, University of Oxford, Oxford, United Kingdom
| | - Lauren E Jarocha
- Department of Chemistry, University of Oxford, Oxford, United Kingdom
- Department of Chemistry, Furman University, Greenville, South Carolina 29613, USA
| | - Kevin B Henbest
- Department of Chemistry, University of Oxford, Oxford, United Kingdom
| | | | - Rabea Bartölke
- AG Neurosensory Sciences/Animal Navigation, Institut für Biologie und Umweltwissenschaften, Carl-von-Ossietzky Universität Oldenburg, Oldenburg, Germany
| | - Jessica Schmidt
- AG Neurosensory Sciences/Animal Navigation, Institut für Biologie und Umweltwissenschaften, Carl-von-Ossietzky Universität Oldenburg, Oldenburg, Germany
| | - Jingjing Xu
- AG Neurosensory Sciences/Animal Navigation, Institut für Biologie und Umweltwissenschaften, Carl-von-Ossietzky Universität Oldenburg, Oldenburg, Germany
| | - Henrik Mouritsen
- AG Neurosensory Sciences/Animal Navigation, Institut für Biologie und Umweltwissenschaften, Carl-von-Ossietzky Universität Oldenburg, Oldenburg, Germany
- Research Centre for Neurosensory Sciences, University of Oldenburg, Oldenburg, Germany
| | - P J Hore
- Department of Chemistry, University of Oxford, Oxford, United Kingdom
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43
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Merlin C. Insect magnetoreception: a Cry for mechanistic insights. J Comp Physiol A Neuroethol Sens Neural Behav Physiol 2023; 209:785-792. [PMID: 37184693 DOI: 10.1007/s00359-023-01636-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/01/2023] [Revised: 04/24/2023] [Accepted: 05/04/2023] [Indexed: 05/16/2023]
Abstract
Migratory animals can detect and use the Earth's magnetic field for orientation and navigation, sometimes over distances spanning thousands of kilometers. How they do so remains, however, one of the greatest mysteries in all sensory biology. Here, the author reviews the progress made to understand the molecular bases of the animal magnetic sense focusing on insect species, the only species in which genetic studies have so far been possible. The central hypothesis in the field posits that magnetically sensitive radical pairs formed by photoexcitation of cryptochrome proteins are key to animal magnetoreception. The author provides an overview of our current state of knowledge for the involvement of insect light-sensitive type I and light-insensitive type II cryptochromes in this enigmatic sense, and highlights some of the unanswered questions to gain a comprehensive understanding of magnetoreception at the organismal level.
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Affiliation(s)
- Christine Merlin
- Center for Biological Clock Research and Department of Biology, Texas A&M University, College Station, TX, 77845, USA.
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44
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Parra-Barrero E, Vijayabaskaran S, Seabrook E, Wiskott L, Cheng S. A map of spatial navigation for neuroscience. Neurosci Biobehav Rev 2023; 152:105200. [PMID: 37178943 DOI: 10.1016/j.neubiorev.2023.105200] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/25/2023] [Revised: 04/13/2023] [Accepted: 04/24/2023] [Indexed: 05/15/2023]
Abstract
Spatial navigation has received much attention from neuroscientists, leading to the identification of key brain areas and the discovery of numerous spatially selective cells. Despite this progress, our understanding of how the pieces fit together to drive behavior is generally lacking. We argue that this is partly caused by insufficient communication between behavioral and neuroscientific researchers. This has led the latter to under-appreciate the relevance and complexity of spatial behavior, and to focus too narrowly on characterizing neural representations of space-disconnected from the computations these representations are meant to enable. We therefore propose a taxonomy of navigation processes in mammals that can serve as a common framework for structuring and facilitating interdisciplinary research in the field. Using the taxonomy as a guide, we review behavioral and neural studies of spatial navigation. In doing so, we validate the taxonomy and showcase its usefulness in identifying potential issues with common experimental approaches, designing experiments that adequately target particular behaviors, correctly interpreting neural activity, and pointing to new avenues of research.
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Affiliation(s)
- Eloy Parra-Barrero
- Institute for Neural Computation, Faculty of Computer Science, Ruhr University Bochum, Bochum, Germany; International Graduate School of Neuroscience, Ruhr University Bochum, Bochum, Germany
| | - Sandhiya Vijayabaskaran
- Institute for Neural Computation, Faculty of Computer Science, Ruhr University Bochum, Bochum, Germany
| | - Eddie Seabrook
- Institute for Neural Computation, Faculty of Computer Science, Ruhr University Bochum, Bochum, Germany
| | - Laurenz Wiskott
- Institute for Neural Computation, Faculty of Computer Science, Ruhr University Bochum, Bochum, Germany; International Graduate School of Neuroscience, Ruhr University Bochum, Bochum, Germany
| | - Sen Cheng
- Institute for Neural Computation, Faculty of Computer Science, Ruhr University Bochum, Bochum, Germany; International Graduate School of Neuroscience, Ruhr University Bochum, Bochum, Germany.
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45
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Warrant EJ. Replication study casts doubt on magnetic sensing in flies. Nature 2023; 620:496-497. [PMID: 37558786 DOI: 10.1038/d41586-023-02489-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 08/11/2023]
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Bassetto M, Reichl T, Kobylkov D, Kattnig DR, Winklhofer M, Hore PJ, Mouritsen H. No evidence for magnetic field effects on the behaviour of Drosophila. Nature 2023; 620:595-599. [PMID: 37558871 PMCID: PMC10432270 DOI: 10.1038/s41586-023-06397-7] [Citation(s) in RCA: 7] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/14/2023] [Accepted: 07/03/2023] [Indexed: 08/11/2023]
Abstract
Migratory songbirds have the remarkable ability to extract directional information from the Earth's magnetic field1,2. The exact mechanism of this light-dependent magnetic compass sense, however, is not fully understood. The most promising hypothesis focuses on the quantum spin dynamics of transient radical pairs formed in cryptochrome proteins in the retina3-5. Frustratingly, much of the supporting evidence for this theory is circumstantial, largely because of the extreme challenges posed by genetic modification of wild birds. Drosophila has therefore been recruited as a model organism, and several influential reports of cryptochrome-mediated magnetic field effects on fly behaviour have been widely interpreted as support for a radical pair-based mechanism in birds6-23. Here we report the results of an extensive study testing magnetic field effects on 97,658 flies moving in a two-arm maze and on 10,960 flies performing the spontaneous escape behaviour known as negative geotaxis. Under meticulously controlled conditions and with vast sample sizes, we have been unable to find evidence for magnetically sensitive behaviour in Drosophila. Moreover, after reassessment of the statistical approaches and sample sizes used in the studies that we tried to replicate, we suggest that many-if not all-of the original results were false positives. Our findings therefore cast considerable doubt on the existence of magnetic sensing in Drosophila and thus strongly suggest that night-migratory songbirds remain the organism of choice for elucidating the mechanism of light-dependent magnetoreception.
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Affiliation(s)
- Marco Bassetto
- Physical & Theoretical Chemistry Laboratory, Department of Chemistry, University of Oxford, Oxford, UK
- AG Neurosensory Sciences/Animal Navigation, Institut für Biologie und Umweltwissenschaften, Carl-von-Ossietzky Universität Oldenburg, Oldenburg, Germany
| | - Thomas Reichl
- AG Neurosensory Sciences/Animal Navigation, Institut für Biologie und Umweltwissenschaften, Carl-von-Ossietzky Universität Oldenburg, Oldenburg, Germany
| | - Dmitry Kobylkov
- AG Neurosensory Sciences/Animal Navigation, Institut für Biologie und Umweltwissenschaften, Carl-von-Ossietzky Universität Oldenburg, Oldenburg, Germany
- Center for Mind/Brain Science, University of Trento, Rovereto, Italy
| | - Daniel R Kattnig
- Living Systems Institute, University of Exeter, Exeter, UK
- Department of Physics, University of Exeter, Exeter, UK
| | - Michael Winklhofer
- AG Sensory Biology of Animals, Institut für Biologie und Umweltwissenschaften, Carl-von-Ossietzky Universität Oldenburg, Oldenburg, Germany
- Research Center for Neurosensory Sciences, University of Oldenburg, Oldenburg, Germany
| | - P J Hore
- Physical & Theoretical Chemistry Laboratory, Department of Chemistry, University of Oxford, Oxford, UK.
| | - Henrik Mouritsen
- AG Neurosensory Sciences/Animal Navigation, Institut für Biologie und Umweltwissenschaften, Carl-von-Ossietzky Universität Oldenburg, Oldenburg, Germany.
- Research Center for Neurosensory Sciences, University of Oldenburg, Oldenburg, Germany.
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Frederiksen A, Langebrake C, Hanić M, Manthey G, Mouritsen H, Liedvogel M, Solov’yov IA. Mutational Study of the Tryptophan Tetrad Important for Electron Transfer in European Robin Cryptochrome 4a. ACS OMEGA 2023; 8:26425-26436. [PMID: 37521624 PMCID: PMC10373462 DOI: 10.1021/acsomega.3c02963] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 04/29/2023] [Accepted: 06/23/2023] [Indexed: 08/01/2023]
Abstract
The ability of migratory birds to sense magnetic fields has been known for decades, although the understanding of the underlying mechanism is still elusive. Currently, the strongest magnetoreceptor candidate in birds is a protein called cryptochrome 4a. The cryptochrome 4a protein has changed through evolution, apparently endowing some birds with a more pronounced magnetic sensitivity than others. Using phylogenetic tools, we show that a specific tryptophan tetrad and a tyrosine residue predicted to be essential for cryptochrome activation are highly conserved in the avian clade. Through state-of-the-art molecular dynamics simulations and associated analyses, we also studied the role of these specific residues and the associated mutants on the overall dynamics of the protein. The analyses of the single residue mutations were used to judge how far a local change in the protein structure can impact specific dynamics of European robin cryptochrome 4a. We conclude that the replacements of each of the tryptophans one by one with a phenylalanine do not compromise the overall stability of the protein.
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Affiliation(s)
- Anders Frederiksen
- Institute
of Physics, Carl von Ossietzky Universität
Oldenburg, Carl-von-Ossietzky Strasse 9-11, Oldenburg 26129, Germany
| | - Corinna Langebrake
- Institute
of Avian Research, An der Vogelwarte 21, Wilhelmshaven 26386, Germany
| | - Maja Hanić
- Institute
of Physics, Carl von Ossietzky Universität
Oldenburg, Carl-von-Ossietzky Strasse 9-11, Oldenburg 26129, Germany
| | - Georg Manthey
- Institute
of Physics, Carl von Ossietzky Universität
Oldenburg, Carl-von-Ossietzky Strasse 9-11, Oldenburg 26129, Germany
- Institute
of Avian Research, An der Vogelwarte 21, Wilhelmshaven 26386, Germany
| | - Henrik Mouritsen
- Department
of Biology and Environmental Sciences, Carl
von Ossietzky University of Oldenburg, Carl-von-Ossietzky Strasse 9-11, Oldenburg 26129, Germany
- Research
Centre for Neurosensory Sciences, Carl von
Ossietzky University of Oldenburg, Carl-von-Ossietzky Strasse 9-11, Oldenburg 26129, Germany
| | - Miriam Liedvogel
- Institute
of Avian Research, An der Vogelwarte 21, Wilhelmshaven 26386, Germany
- Department
of Biology and Environmental Sciences, Carl
von Ossietzky University of Oldenburg, Carl-von-Ossietzky Strasse 9-11, Oldenburg 26129, Germany
- MPRG
Behavioural Genomics, Max Planck Institute
for Evolutionary Biology, August-Thienemann-Str. 2, Plön 24306, Germany
| | - Ilia A. Solov’yov
- Institute
of Physics, Carl von Ossietzky Universität
Oldenburg, Carl-von-Ossietzky Strasse 9-11, Oldenburg 26129, Germany
- Research
Centre for Neurosensory Sciences, Carl von
Ossietzky University of Oldenburg, Carl-von-Ossietzky Strasse 9-11, Oldenburg 26129, Germany
- Department
of Physics, Center for Nanoscale Dynamics (CENAD), Carl von Ossietzky University of Oldenburg, Ammerländer Heerstr. 114-118, Oldenburg 26129, Germany
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Chuchkova L, Bodenstedt S, Picazo-Frutos R, Eills J, Tretiak O, Hu Y, Barskiy DA, de Santis J, Tayler MCD, Budker D, Sheberstov KF. Magnetometer-Detected Nuclear Magnetic Resonance of Photochemically Hyperpolarized Molecules. J Phys Chem Lett 2023:6814-6822. [PMID: 37486855 DOI: 10.1021/acs.jpclett.3c01310] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 07/26/2023]
Abstract
Photochemically induced dynamic nuclear polarization (photo-CIDNP) enables nuclear spin ordering by irradiating samples with light. Polarized spins are conventionally detected via high-field chemical-shift-resolved NMR (above 0.1 T). In this Letter, we demonstrate in situ low-field photo-CIDNP measurements using a magnetically shielded fast-field-cycling NMR setup detecting Larmor precession via atomic magnetometers. For solutions comprising mM concentrations of the photochemically polarized molecules, hyperpolarized 1H magnetization is detected by pulse-acquired NMR spectroscopy. The observed NMR line widths are about 5 times narrower than normally anticipated in high-field NMR and are systematically affected by light irradiation during the acquisition period, reflecting a reduction of the transverse relaxation time constant, T2*, on the order of 10%. Magnetometer-detected photo-CIDNP spectroscopy enables straightforward observation of spin-chemistry processes in the ambient field range from a few nT to tens of mT. Potential applications of this measuring modality are discussed.
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Affiliation(s)
- Liubov Chuchkova
- Institut für Physik, Johannes Gutenberg Universität-Mainz, 55128 Mainz, Germany
- Helmholtz-Institut Mainz, GSI Helmholtzzentrum für Schwerionenforschung, 55128 Mainz, Germany
| | - Sven Bodenstedt
- ICFO-Institut de Ciències Fotòniques, The Barcelona Institute of Science and Technology, 08860 Castelldefels (Barcelona), Spain
| | - Román Picazo-Frutos
- Institut für Physik, Johannes Gutenberg Universität-Mainz, 55128 Mainz, Germany
- Helmholtz-Institut Mainz, GSI Helmholtzzentrum für Schwerionenforschung, 55128 Mainz, Germany
| | - James Eills
- Institute for Bioengineering of Catalonia, 08028 Barcelona, Spain
| | - Oleg Tretiak
- Institut für Physik, Johannes Gutenberg Universität-Mainz, 55128 Mainz, Germany
- Helmholtz-Institut Mainz, GSI Helmholtzzentrum für Schwerionenforschung, 55128 Mainz, Germany
| | - Yinan Hu
- Institut für Physik, Johannes Gutenberg Universität-Mainz, 55128 Mainz, Germany
- Helmholtz-Institut Mainz, GSI Helmholtzzentrum für Schwerionenforschung, 55128 Mainz, Germany
- State Key Laboratory of Brain and Cognitive Science, Institute of Biophysics, Chinese Academy of Sciences, Beijing 100101, China
| | - Danila A Barskiy
- Institut für Physik, Johannes Gutenberg Universität-Mainz, 55128 Mainz, Germany
- Helmholtz-Institut Mainz, GSI Helmholtzzentrum für Schwerionenforschung, 55128 Mainz, Germany
| | - Jacopo de Santis
- ICFO-Institut de Ciències Fotòniques, The Barcelona Institute of Science and Technology, 08860 Castelldefels (Barcelona), Spain
| | - Michael C D Tayler
- ICFO-Institut de Ciències Fotòniques, The Barcelona Institute of Science and Technology, 08860 Castelldefels (Barcelona), Spain
| | - Dmitry Budker
- Institut für Physik, Johannes Gutenberg Universität-Mainz, 55128 Mainz, Germany
- Helmholtz-Institut Mainz, GSI Helmholtzzentrum für Schwerionenforschung, 55128 Mainz, Germany
- Department of Physics, University of California, Berkeley, California 94720-7300, United States
| | - Kirill F Sheberstov
- Institut für Physik, Johannes Gutenberg Universität-Mainz, 55128 Mainz, Germany
- Helmholtz-Institut Mainz, GSI Helmholtzzentrum für Schwerionenforschung, 55128 Mainz, Germany
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Yu Q, Mao H, Zhao Z, Quan X, Zhang Y. Electromotive force induced by dynamic magnetic field electrically polarized sediment to aggravate methane emission. WATER RESEARCH 2023; 240:120097. [PMID: 37224670 DOI: 10.1016/j.watres.2023.120097] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/05/2022] [Revised: 04/26/2023] [Accepted: 05/16/2023] [Indexed: 05/26/2023]
Abstract
As a primary driving force of global methane production, methanogens like other living organisms are exposed to an environment filled with dynamic electromagnetic waves, which might induce electromotive force (EMF) to potentially influence the metabolism of methanogens. However, no reports have been found on the effects of the induced electromotive force on methane production. In this study, we found that exposure to a dynamic magnetic field enhanced bio-methanogenesis via the induced electromotive force. When exposed to a dynamic magnetic field with 0.20 to 0.40 mT of intensity, the methane emission of the sediments increased by 41.71%. The respiration of methanogens and bacteria was accelerated by the EMF, as the ratios of F420H2/F420 and NAD+/NADH of the sediment increased by 44.12% and 55.56%, respectively. The respiratory enzymes in respiration chains might be polarized with the EMF to accelerate the proton-coupled electron transfer to enhance microbial metabolism. Together with the enriched exoelectrogens and electrotrophic methanogens, as well as the increased sediment electro-activities, this study indicated that the EMF could enhance the electron exchange among extracellular respiratory microorganisms to increase the methane emission from sediments.
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Affiliation(s)
- Qilin Yu
- Key Laboratory of Industrial Ecology and Environmental Engineering (Dalian University of Technology), Ministry of Education, School of Environmental Science and Technology, Dalian University of Technology, Dalian 116024, China
| | - Haohao Mao
- Key Laboratory of Industrial Ecology and Environmental Engineering (Dalian University of Technology), Ministry of Education, School of Environmental Science and Technology, Dalian University of Technology, Dalian 116024, China
| | - Zhiqiang Zhao
- Key Laboratory of Industrial Ecology and Environmental Engineering (Dalian University of Technology), Ministry of Education, School of Environmental Science and Technology, Dalian University of Technology, Dalian 116024, China
| | - Xie Quan
- Key Laboratory of Industrial Ecology and Environmental Engineering (Dalian University of Technology), Ministry of Education, School of Environmental Science and Technology, Dalian University of Technology, Dalian 116024, China
| | - Yaobin Zhang
- Key Laboratory of Industrial Ecology and Environmental Engineering (Dalian University of Technology), Ministry of Education, School of Environmental Science and Technology, Dalian University of Technology, Dalian 116024, China.
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McLaren JD, Schmaljohann H, Blasius B. Gauge-and-compass migration: inherited magnetic headings and signposts can adapt to changing geomagnetic landscapes. MOVEMENT ECOLOGY 2023; 11:37. [PMID: 37408064 DOI: 10.1186/s40462-023-00406-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/17/2023] [Accepted: 06/27/2023] [Indexed: 07/07/2023]
Abstract
BACKGROUND For many migratory species, inexperienced (naïve) individuals reach remote non-breeding areas independently using one or more inherited compass headings and, potentially, magnetic signposts to gauge where to switch between compass headings. Inherited magnetic-based migration has not yet been assessed as a population-level process, particularly across strong geomagnetic gradients or where long-term geomagnetic shifts (hereafter, secular variation) could create mismatches with magnetic headings. Therefore, it remains unclear whether inherited magnetic headings and signposts could potentially adapt to secular variation under natural selection. METHODS To address these unknowns, we modelled migratory orientation programs using an evolutionary algorithm incorporating global geomagnetic data (1900-2023). Modelled population mixing incorporated both natal dispersal and trans-generational inheritance of magnetic headings and signposts, including intrinsic (stochastic) variability in inheritance. Using the model, we assessed robustness of trans-hemispheric migration of a migratory songbird whose Nearctic breeding grounds have undergone rapid secular variation (mean 34° clockwise drift in declination, 1900-2023), and which travels across strong geomagnetic gradients via Europe to Africa. RESULTS Model-evolved magnetic-signposted migration was overall successful throughout the 124-year period, with 60-90% mean successful arrival across a broad range in plausible precision in compass headings and gauging signposts. Signposted migration reduced trans-Atlantic flight distances and was up to twice as successful compared with non-signposted migration. Magnetic headings shifted plastically in response to the secular variation (mean 16°-17° among orientation programs), whereas signpost latitudes were more constrained (3°-5° mean shifts). This plasticity required intrinsic variability in inheritance (model-evolved σ ≈ 2.6° standard error), preventing clockwise secular drift from causing unsustainable open-ocean flights. CONCLUSIONS Our study supports the potential long-term viability of inherited magnetic migratory headings and signposts, and illustrates more generally how inherited migratory orientation programs can both mediate and constrain evolution of routes, in response to global environmental change.
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Affiliation(s)
- James D McLaren
- Institute for Chemistry and Biology of the Marine Environment (ICBM), University of Oldenburg, 26129, Oldenburg, Germany.
| | - Heiko Schmaljohann
- Institute for Biology and Environmental Sciences (IBU), Carl Von Ossietzky University of Oldenburg, 26129, Oldenburg, Germany
- Institute of Avian Research, 26386, Wilhelmshaven, Germany
| | - Bernd Blasius
- Institute for Chemistry and Biology of the Marine Environment (ICBM), University of Oldenburg, 26129, Oldenburg, Germany
- Helmholtz Institute for Functional Marine Biodiversity (HIFMB), University of Oldenburg, 26129, Oldenburg, Germany
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