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Ranjbari S, Almahmeed W, Kesharwani P, Sahebkar A. Advancements in biosensor technologies for fibrinogen detection in cardiovascular disorders. Talanta 2024; 280:126687. [PMID: 39126966 DOI: 10.1016/j.talanta.2024.126687] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/06/2024] [Revised: 08/04/2024] [Accepted: 08/06/2024] [Indexed: 08/12/2024]
Abstract
Rapid and accurate identification of cardiovascular diseases (CVDs) are crucial for timely medical interventions and improved patient outcomes. Fibrinogen (Fib) has emerged as a valuable biomarker for CVDs, playing a significant role in their early detection. Elevated levels of Fib are associated with an increased risk of developing CVD, highlighting its importance for more precise diagnosis and effective treatment strategies. In recent years, significant advancements have been made in developing biosensor-based approaches for detecting Fib, offering high sensitivity and specificity. This review aims to explore the impact of Fib on cardiovascular conditions, assess the current advancements, and discuss the future potential of biosensors in Fib research for diagnosing cardiovascular disorders. Furthermore, we evaluate various biosensor techniques, including optical, electrochemical, electronic, and gravimetric methods, in terms of their utility for measuring Fib in clinical samples such as serum, plasma, whole blood, and other body fluids. A comparative analysis of these techniques is conducted based on their performance characteristics. By providing a comprehensive overview of the relationship between Fib and cardiovascular ailments, this review aims to clarify the advancements in biosensor technology for Fib detection. The comparison of different biosensor techniques will aid researchers and clinicians in selecting the most suitable approach for their specific diagnostic needs. Ultimately, integrating biosensors into clinical practice has the potential to revolutionize the detection and management of CVDs, leading to improved patient care and outcomes.
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Affiliation(s)
- Sara Ranjbari
- Applied Biomedical Research Center, Faculty of Medicine, Mashhad University of Medical Sciences, Mashhad, Iran
| | - Wael Almahmeed
- Heart and Vascular Institute, Cleveland Clinic Abu Dhabi, Abu Dhabi, United Arab Emirates
| | - Prashant Kesharwani
- Department of Pharmaceutics, School of Pharmaceutical Education and Research, Jamia Hamdard, New Delhi, 110062, India.
| | - Amirhossein Sahebkar
- Center for Global Health Research, Saveetha Medical College and Hospitals, Saveetha Institute of Medical and Technical Sciences, Saveetha University, Chennai, India; Biotechnology Research Center, Pharmaceutical Technology Institute, Mashhad University of Medical Sciences, Mashhad, Iran; Applied Biomedical Research Center, Mashhad University of Medical Sciences, Mashhad, Iran.
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2
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Rahman Y, Hejmady S, Nejadnik R. Prediction of Self-Association and Solution Behavior of Monoclonal Antibodies Using the QCM-D Metric of Loosely Interacting Layer. Mol Pharm 2024. [PMID: 39611773 DOI: 10.1021/acs.molpharmaceut.4c00656] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2024]
Abstract
Despite the increasing availability and success of monoclonal antibodies (mAb), early identification of candidate molecules with desirable developability attributes remains challenging due to self-association and poor solution behavior. Measuring these phenomena experimentally using the available methods is complicated in mAbs development. Quartz crystal microbalance with dissipation monitoring (QCM-D) detects a loosely interacting layer on top of the irreversibly adsorbed layer of molecules, providing information about the mAbs interaction. This work aimed to explore whether the characteristics of this layer can be used as a reliable self-association metric. QCM-D experiments showed a large frequency shift (Δf) associated with loosely interacting layers for omalizumab but a small or absent layer for tocilizumab. Accordingly, the viscosity of omalizumab increased exponentially at high concentrations compared to tocilizumab. Testing eight mAbs with different self-association behaviors revealed a strong rank order correlation between the mostly used metric of self-association, i.e., diffusion interaction parameter (kD-DLS), and Δf, indicating Δf's potential for predicting mAb solution behavior. The study also highlighted the robustness of the metric to impurities and temperature variations compared to the sensitive kD-DLS. Overall, we demonstrate that the loosely interacting layer provides valuable information about mAb self-association, predicting the colloidal stability and solution behavior in therapeutic development.
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Affiliation(s)
- Yusra Rahman
- Department of Pharmaceutical Sciences & Experimental Therapeutics, College of Pharmacy, University of Iowa, Iowa City, Iowa 52242, United States
| | - Siddhanth Hejmady
- Department of Pharmaceutical Sciences & Experimental Therapeutics, College of Pharmacy, University of Iowa, Iowa City, Iowa 52242, United States
| | - Reza Nejadnik
- Department of Pharmaceutical Sciences & Experimental Therapeutics, College of Pharmacy, University of Iowa, Iowa City, Iowa 52242, United States
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3
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Deflandre L, Dauphin-Ducharme P. "Binding" or "Binding and Switching"? A Perspective on Resolving Conformational Changes of Surface-Attached Biomolecular Receptors. ACS Sens 2024; 9:5615-5625. [PMID: 39445451 DOI: 10.1021/acssensors.4c01677] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2024]
Abstract
Understanding the structural reconfiguration of a biomolecular receptor remains a topic of particular interest to the biosensing community. This is because conformationally changing receptors are commonly employed in biosensors to harness their capability to bind specifically to their target. Often, such receptors are attached to surfaces so that binding can be transduced into a measurable response. Doing so, however, can impose constraints on the possible configurations they can adopt. Such constraints can ultimately influence, for example, their receptor-target binding models or their affinity, which is essential to provide the desired analytical performances in biosensors. Motivated by the idea of gaining further insights into the impact of surface attachment on conformationally switching receptors attached to surfaces, we explore here the various surface-based techniques capable of monitoring structural changes. We decided to narrow our survey to techniques that have been applied to the investigation of nucleic acids to provide an overview of their key features. We envision that this will bring a broader perspective of the field and the challenges ahead with the hopes of "finding the switch" in surface-attached biomolecular receptors.
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Affiliation(s)
- Lisa Deflandre
- Département de chimie, Université de Sherbrooke, Sherbrooke, Québec J1K 2R1, Canada
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Gong H, Cai G, Chen C, Chen F, Cai C. Construction of a monoclonal molecular imprinted sensor with high affinity for specific recognition of influenza a virus subtype. Talanta 2024; 278:126568. [PMID: 39018763 DOI: 10.1016/j.talanta.2024.126568] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/13/2024] [Revised: 06/26/2024] [Accepted: 07/12/2024] [Indexed: 07/19/2024]
Abstract
Although molecular imprinting technology has been widely used in the construction of virus sensors, it is still a great challenge to identify subtypes viruses specifically because of their high similarity in morphology, size and structure. Here, a monoclonal molecular imprinted polymers (MIPs) sensor for recognition of H5N1 is constructed to permit the accurate distinguishing of H5N1 from other influenza A virus (IAV) subtypes. Firstly, H5N1 are immobilized on magnetic microspheres to produce H5N1-MagNPs, then the high affinity nanogel H5N1-MIPs is prepared by solid phase imprinting technique. When H5N1-MIPs is combined with MagNP-H5N1, different concentrations of H5N1 are added for competitive substitution. The quantitative detection of H5N1 is realized by the change of fluorescence intensity of supernatant. As expected, the constructed sensor shows satisfactory selectivity, and can identify the target virus from highly similar IAV subtypes, such as H1N1, H7N9 and H9N2. The sensor was highly sensitive, with a detection limit of 0.58 fM, and a selectivity factor that is comparable to that of other small MIPs sensors is achieved. In addition, the proposed sensor is cheap, with a cost of only RMB 0.08 yuan. The proposed monoclonal sensor provides a new method for the specific recognition of designated virus subtype, which is expected to be used for large-scale screening and accurate treatment of infected people.
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Affiliation(s)
- Hang Gong
- College of Chemistry and Chemical Engineering, Yunnan Normal University, Kunming, 650500, China; The Key Laboratory for Green Organic Synthesis and Application of Hunan Province, College of Chemistry, Xiangtan University, Xiangtan, 411105, China.
| | - Ganping Cai
- The Key Laboratory for Green Organic Synthesis and Application of Hunan Province, College of Chemistry, Xiangtan University, Xiangtan, 411105, China
| | - Chunyan Chen
- The Key Laboratory for Green Organic Synthesis and Application of Hunan Province, College of Chemistry, Xiangtan University, Xiangtan, 411105, China
| | - Feng Chen
- The Key Laboratory for Green Organic Synthesis and Application of Hunan Province, College of Chemistry, Xiangtan University, Xiangtan, 411105, China
| | - Changqun Cai
- The Key Laboratory for Green Organic Synthesis and Application of Hunan Province, College of Chemistry, Xiangtan University, Xiangtan, 411105, China.
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Zhao W, Zhang W, Chen J, Li H, Han L, Li X, Wang J, Song W, Xu C, Cai X, Wang L. Sensitivity-Enhancing Strategies of Graphene Field-Effect Transistor Biosensors for Biomarker Detection. ACS Sens 2024; 9:2705-2727. [PMID: 38843307 DOI: 10.1021/acssensors.4c00322] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/29/2024]
Abstract
The ultrasensitive recognition of biomarkers plays a crucial role in the precise diagnosis of diseases. Graphene-based field-effect transistors (GFET) are considered the most promising devices among the next generation of biosensors. GFET biosensors possess distinct advantages, including label-free, ease of integration and operation, and the ability to directly detect biomarkers in liquid environments. This review summarized recent advances in GFET biosensors for biomarker detection, with a focus on interface functionalization. Various sensitivity-enhancing strategies have been overviewed for GFET biosensors, from the perspective of optimizing graphene synthesis and transfer methods, refinement of surface functionalization strategies for the channel layer and gate electrode, design of biorecognition elements and reduction of nonspecific adsorption. Further, this review extensively explores GFET biosensors functionalized with antibodies, aptamers, and enzymes. It delves into sensitivity-enhancing strategies employed in the detection of biomarkers for various diseases (such as cancer, cardiovascular diseases, neurodegenerative disorders, infectious viruses, etc.) along with their application in integrated microfluidic systems. Finally, the issues and challenges in strategies for the modulation of biosensing interfaces are faced by GFET biosensors in detecting biomarkers.
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Affiliation(s)
- Weilong Zhao
- School of Mechanical Engineering, Qilu University of Technology (Shandong Academy of Sciences), Jinan 250353, China
- Shandong Institute of Mechanical Design and Research, Jinan 250353, China
| | - Wenhong Zhang
- College of Mechanical Engineering, Donghua University, Shanghai 201620, China
| | - Jun Chen
- School of Mechanical Engineering, Qilu University of Technology (Shandong Academy of Sciences), Jinan 250353, China
- Shandong Institute of Mechanical Design and Research, Jinan 250353, China
| | - Huimin Li
- School of Mechanical Engineering, Qilu University of Technology (Shandong Academy of Sciences), Jinan 250353, China
- Shandong Institute of Mechanical Design and Research, Jinan 250353, China
| | - Lin Han
- Shenzhen Research Institute of Shandong University, Shenzhen 518057, China
| | - Xinyu Li
- Department of Oncology, Shandong Provincial Hospital Affiliated to Shandong University, Shandong 250021, China
| | - Jing Wang
- College of Mechanical Engineering, Donghua University, Shanghai 201620, China
| | - Wei Song
- Department of Oncology, Shandong Provincial Hospital Affiliated to Shandong University, Shandong 250021, China
| | - Chonghai Xu
- School of Mechanical Engineering, Qilu University of Technology (Shandong Academy of Sciences), Jinan 250353, China
- Shandong Institute of Mechanical Design and Research, Jinan 250353, China
| | - Xinxia Cai
- State Key Laboratory of Transducer Technology, Aerospace Information Research Institute, Chinese Academy of Sciences, Beijing 100190, China
| | - Li Wang
- School of Mechanical Engineering, Qilu University of Technology (Shandong Academy of Sciences), Jinan 250353, China
- Shandong Institute of Mechanical Design and Research, Jinan 250353, China
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Babu S, Lee K, Yang H. Enzymatic Precipitation of Highly Electroactive and Ion-Transporting Prussian Blue for a Sensitive Electrochemical Immunosensor. ACS Sens 2024; 9:3224-3232. [PMID: 38832638 DOI: 10.1021/acssensors.4c00569] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/05/2024]
Abstract
Sensitive and/or multiplex electrochemical biosensors often require efficient (bio)catalytic conversion of substrates into insoluble electroactive products. The enzymatic formation and precipitation of coordination polymers under mild conditions offers a promising solution for this purpose. Herein, we report the enzymatic precipitation of Prussian blue (PB), a highly electroactive and ion-transporting coordination polymer, on an immunosensing electrode for application in a sensitive electrochemical immunosensor for detecting thyroid-stimulating hormone (TSH). Five pairs of redox enzymes and their specific reductants were examined to achieve rapid PB precipitation and electrochemical oxidation. Among these pairs, O2-insensitive flavin adenine dinucleotide-dependent glucose dehydrogenase (FAD-GDH) paired with glucose yielded the highest electrochemical signal-to-background (S/B) ratio. FAD-GDH catalyzed the conversion of Fe(CN)63- to Fe(CN)64-, which coordinated with Fe3+, leading to PB formation and subsequent precipitation through repeated conversions. The resulting PB precipitate, with its close proximity to the electrode, facilitated rapid electrochemical oxidation and generated a strong electrochemical signal. Notably, the precipitation and electrochemical oxidation of PB were more effective than those of its analogues. When applied to a sandwich-type immunosensor for TSH detection, the enzymatic PB precipitation achieved a calculated detection limit of approximately 2 pg/mL in artificial serum, covering the clinically relevant range. These findings indicate the potential widespread utility of PB precipitation and electrochemical oxidation for sensitive multiplex biomarker detection.
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Affiliation(s)
- Sathyan Babu
- Department of Chemistry and Chemistry Institute for Functional Materials, Pusan National University, Busan 46241, Korea
| | - Kyuseok Lee
- Department of Chemistry and Chemistry Institute for Functional Materials, Pusan National University, Busan 46241, Korea
| | - Haesik Yang
- Department of Chemistry and Chemistry Institute for Functional Materials, Pusan National University, Busan 46241, Korea
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Zhang Y, Chen D, He W, Chen N, Zhou L, Yu L, Yang Y, Yuan Q. Interface-Engineered Field-Effect Transistor Electronic Devices for Biosensing. ADVANCED MATERIALS (DEERFIELD BEACH, FLA.) 2023:e2306252. [PMID: 38048547 DOI: 10.1002/adma.202306252] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/28/2023] [Revised: 09/17/2023] [Indexed: 12/06/2023]
Abstract
Promising advances in molecular medicine have promoted the urgent requirement for reliable and sensitive diagnostic tools. Electronic biosensing devices based on field-effect transistors (FETs) exhibit a wide range of benefits, including rapid and label-free detection, high sensitivity, easy operation, and capability of integration, possessing significant potential for application in disease screening and health monitoring. In this perspective, the tremendous efforts and achievements in the development of high-performance FET biosensors in the past decade are summarized, with emphasis on the interface engineering of FET-based electrical platforms for biomolecule identification. First, an overview of engineering strategies for interface modulation and recognition element design is discussed in detail. For a further step, the applications of FET-based electrical devices for in vitro detection and real-time monitoring in biological systems are comprehensively reviewed. Finally, the key opportunities and challenges of FET-based electronic devices in biosensing are discussed. It is anticipated that a comprehensive understanding of interface engineering strategies in FET biosensors will inspire additional techniques for developing highly sensitive, specific, and stable FET biosensors as well as emerging designs for next-generation biosensing electronics.
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Affiliation(s)
- Yun Zhang
- College of Chemistry and Molecular Sciences, Key Laboratory of Biomedical Polymers of Ministry of Education, Institute of Molecular Medicine, Renmin Hospital of Wuhan University, School of Microelectronics, Wuhan University, Wuhan, 430072, P. R. China
| | - Duo Chen
- College of Chemistry and Molecular Sciences, Key Laboratory of Biomedical Polymers of Ministry of Education, Institute of Molecular Medicine, Renmin Hospital of Wuhan University, School of Microelectronics, Wuhan University, Wuhan, 430072, P. R. China
| | - Wang He
- College of Chemistry and Molecular Sciences, Key Laboratory of Biomedical Polymers of Ministry of Education, Institute of Molecular Medicine, Renmin Hospital of Wuhan University, School of Microelectronics, Wuhan University, Wuhan, 430072, P. R. China
| | - Na Chen
- College of Chemistry and Molecular Sciences, Key Laboratory of Biomedical Polymers of Ministry of Education, Institute of Molecular Medicine, Renmin Hospital of Wuhan University, School of Microelectronics, Wuhan University, Wuhan, 430072, P. R. China
| | - Liping Zhou
- College of Chemistry and Molecular Sciences, Key Laboratory of Biomedical Polymers of Ministry of Education, Institute of Molecular Medicine, Renmin Hospital of Wuhan University, School of Microelectronics, Wuhan University, Wuhan, 430072, P. R. China
| | - Lilei Yu
- College of Chemistry and Molecular Sciences, Key Laboratory of Biomedical Polymers of Ministry of Education, Institute of Molecular Medicine, Renmin Hospital of Wuhan University, School of Microelectronics, Wuhan University, Wuhan, 430072, P. R. China
| | - Yanbing Yang
- College of Chemistry and Molecular Sciences, Key Laboratory of Biomedical Polymers of Ministry of Education, Institute of Molecular Medicine, Renmin Hospital of Wuhan University, School of Microelectronics, Wuhan University, Wuhan, 430072, P. R. China
| | - Quan Yuan
- College of Chemistry and Molecular Sciences, Key Laboratory of Biomedical Polymers of Ministry of Education, Institute of Molecular Medicine, Renmin Hospital of Wuhan University, School of Microelectronics, Wuhan University, Wuhan, 430072, P. R. China
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8
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Weidman J, Mathews L, Gokhale K. Quartz Crystal Microbalance as a Predictive Tool for Drug-Material of Construction Interactions in Intravenous Protein Drug Administration. J Pharm Sci 2023; 112:3154-3163. [PMID: 37597752 DOI: 10.1016/j.xphs.2023.07.019] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/19/2022] [Revised: 07/19/2023] [Accepted: 07/19/2023] [Indexed: 08/21/2023]
Abstract
As a growing number of protein drug products are developed, formulation characterization is becoming important. An IgG drug product is tested at concentrations from 0.0001-0.1 mg/mL for adsorption behavior to polymer surfaces polyvinyl chloride (PVC) and polypropylene (PP) upon dilution in normal saline (NS) using quartz crystal microbalance with dissipation (QCM-D). The studies mimicked IgG antibody interaction during IV administration with polymeric surfaces within syringes, lines, and bags. Drug product was characterized with excipients, with focus on surfactant. Drug solutions were run over polymer-coated sensors to measure the adsorption behavior of the formulation with emphasis on the behavior of each of the formulation's components. Over 60 sensorgram data sets were correlated with assayed protein solution concentrations in mock NS-diluted infusions of drug product in the equivalent concentrations to QCM experiments to build a preliminary predictive model for determining fraction of drug and surfactant adsorbed and lost at the hydrophobic surface during administration. These results create a method for reliably and predictively estimating drug product adsorption behavior and protein drug dose loss on polymers at different protein drug concentrations.
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Affiliation(s)
- Joseph Weidman
- Janssen Pharmaceuticals, A Johnson & Johnson Company 1400 McKean Rd, Lower Gwynedd Township, PA 19002, USA.
| | - Ligi Mathews
- Janssen Pharmaceuticals, A Johnson & Johnson Company 335 Phoenixville Pike, Malvern, PA 19355, USA
| | - Kedar Gokhale
- Janssen Pharmaceuticals, A Johnson & Johnson Company 335 Phoenixville Pike, Malvern, PA 19355, USA
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Koike M, Grosskreuz I, Asakura Y, Miyawaki R, Gies H, Wada H, Shimojima A, Marler B, Kuroda K. Bridging the Gap between Zeolites and Dense Silica Polymorphs: Formation of All-Silica Zeolite with High Framework Density from Natural Layered Silicate Magadiite. Chemistry 2023; 29:e202301942. [PMID: 37486717 DOI: 10.1002/chem.202301942] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/12/2023] [Revised: 07/18/2023] [Accepted: 07/20/2023] [Indexed: 07/25/2023]
Abstract
A silica zeolite (RWZ-1) with a very high framework density (FD) was synthesized from highly crystalline natural layered silicate magadiite, bridging the gap between the two research areas of zeolites and dense silica polymorphs. Magadiite was topotactically converted into a 3D framework through two-step heat treatment. The resulting structure had a 1D micropore system of channel-like cavities with an FD of 22.1 Si atoms/1000 Å3 . This value is higher than those of all other silica zeolites reported so far, approaching those of silica polymorphs (tridymite (22.6) and α-quartz (26.5)). RWZ-1 is a slight negative thermal expansion material with thermal properties approaching those of dense silica polymorphs. It contributes to the creation of a new field on microporous high-density silica/silicates. Synergistic interactions are expected between the micropores with molecular sieving properties and the dense layer-like building units with different topologies which provide thermal and mechanical stabilities.
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Affiliation(s)
- Masakazu Koike
- Department of Applied Chemistry Faculty of Science and Engineering, Waseda University, 3-4-1 Okubo, Shinjuku-ku, Tokyo, 169-8555, Japan
- Kagami Memorial Research Institute for Materials Science and Technology, Waseda University, 2-8-26 Nishiwaseda, Shinjuku-ku, Tokyo, 169-0051, Japan
| | - Isabel Grosskreuz
- Institute of Geology, Mineralogy and Geophysics, Ruhr-University Bochum, Bochum, 44801, Germany
| | - Yusuke Asakura
- Institute of Multidisciplinary Research for Advanced Materials (IMRAM), Tohoku University, 2-1-1 Katahira, Aoba-ku, Sendai, 980-8577, Japan
- Present Address: Graduate School of Engineering, Nagoya University Furo-cho, Chikusa-ku, Nagoya, 464-8603, Japan
| | - Ritsuro Miyawaki
- Department of Geology and Paleontology, National Museum of Nature and Science, 4-1-1 Amakubo, Tsukuba, 305-0005, Japan
| | - Hermann Gies
- Institute of Geology, Mineralogy and Geophysics, Ruhr-University Bochum, Bochum, 44801, Germany
| | - Hiroaki Wada
- Department of Applied Chemistry Faculty of Science and Engineering, Waseda University, 3-4-1 Okubo, Shinjuku-ku, Tokyo, 169-8555, Japan
| | - Atsushi Shimojima
- Department of Applied Chemistry Faculty of Science and Engineering, Waseda University, 3-4-1 Okubo, Shinjuku-ku, Tokyo, 169-8555, Japan
- Kagami Memorial Research Institute for Materials Science and Technology, Waseda University, 2-8-26 Nishiwaseda, Shinjuku-ku, Tokyo, 169-0051, Japan
| | - Bernd Marler
- Institute of Geology, Mineralogy and Geophysics, Ruhr-University Bochum, Bochum, 44801, Germany
| | - Kazuyuki Kuroda
- Department of Applied Chemistry Faculty of Science and Engineering, Waseda University, 3-4-1 Okubo, Shinjuku-ku, Tokyo, 169-8555, Japan
- Kagami Memorial Research Institute for Materials Science and Technology, Waseda University, 2-8-26 Nishiwaseda, Shinjuku-ku, Tokyo, 169-0051, Japan
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Watkin SAJ, Bennie RZ, Gilkes JM, Nock VM, Pearce FG, Dobson RCJ. On the utility of microfluidic systems to study protein interactions: advantages, challenges, and applications. EUROPEAN BIOPHYSICS JOURNAL : EBJ 2023; 52:459-471. [PMID: 36583735 PMCID: PMC9801160 DOI: 10.1007/s00249-022-01626-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/11/2022] [Revised: 12/15/2022] [Accepted: 12/20/2022] [Indexed: 12/31/2022]
Abstract
Within the complex milieu of a cell, which comprises a large number of different biomolecules, interactions are critical for function. In this post-reductionist era of biochemical research, the 'holy grail' for studying biomolecular interactions is to be able to characterize them in native environments. While there are a limited number of in situ experimental techniques currently available, there is a continuing need to develop new methods for the analysis of biomolecular complexes that can cope with the additional complexities introduced by native-like solutions. We think approaches that use microfluidics allow researchers to access native-like environments for studying biological problems. This review begins with a brief overview of the importance of studying biomolecular interactions and currently available methods for doing so. Basic principles of diffusion and microfluidics are introduced and this is followed by a review of previous studies that have used microfluidics to measure molecular diffusion and a discussion of the advantages and challenges of this technique.
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Affiliation(s)
- Serena A J Watkin
- Biomolecular Interaction Centre, University of Canterbury, Christchurch, New Zealand
- School of Biological Sciences, University of Canterbury, Christchurch, New Zealand
| | - Rachel Z Bennie
- Biomolecular Interaction Centre, University of Canterbury, Christchurch, New Zealand
- School of Biological Sciences, University of Canterbury, Christchurch, New Zealand
| | - Jenna M Gilkes
- Protein Science and Engineering Team, Callaghan Innovation, Christchurch, New Zealand
| | - Volker M Nock
- Biomolecular Interaction Centre, University of Canterbury, Christchurch, New Zealand.
- Department of Electrical and Computer Engineering, University of Canterbury, Christchurch, New Zealand.
- The MacDiarmid Institute for Advanced Materials and Nanotechnology, Wellington, New Zealand.
| | - F Grant Pearce
- Biomolecular Interaction Centre, University of Canterbury, Christchurch, New Zealand.
- School of Biological Sciences, University of Canterbury, Christchurch, New Zealand.
| | - Renwick C J Dobson
- Biomolecular Interaction Centre, University of Canterbury, Christchurch, New Zealand.
- School of Biological Sciences, University of Canterbury, Christchurch, New Zealand.
- The MacDiarmid Institute for Advanced Materials and Nanotechnology, Wellington, New Zealand.
- Department of Biochemistry and Molecular Biology, Bio21 Molecular Science and Biotechnology Institute, University of Melbourne, Melbourne, VIC, Australia.
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11
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Parihar A, Yadav S, Sadique MA, Ranjan P, Kumar N, Singhal A, Khare V, Khan R, Natarajan S, Srivastava AK. Internet-of-medical-things integrated point-of-care biosensing devices for infectious diseases: Toward better preparedness for futuristic pandemics. Bioeng Transl Med 2023; 8:e10481. [PMID: 37206204 PMCID: PMC10189496 DOI: 10.1002/btm2.10481] [Citation(s) in RCA: 14] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/12/2022] [Revised: 12/15/2022] [Accepted: 12/19/2022] [Indexed: 01/04/2023] Open
Abstract
Microbial pathogens have threatened the world due to their pathogenicity and ability to spread in communities. The conventional laboratory-based diagnostics of microbes such as bacteria and viruses need bulky expensive experimental instruments and skilled personnel which limits their usage in resource-limited settings. The biosensors-based point-of-care (POC) diagnostics have shown huge potential to detect microbial pathogens in a faster, cost-effective, and user-friendly manner. The use of various transducers such as electrochemical and optical along with microfluidic integrated biosensors further enhances the sensitivity and selectivity of detection. Additionally, microfluidic-based biosensors offer the advantages of multiplexed detection of analyte and the ability to deal with nanoliters volume of fluid in an integrated portable platform. In the present review, we discussed the design and fabrication of POCT devices for the detection of microbial pathogens which include bacteria, viruses, fungi, and parasites. The electrochemical techniques and current advances in this field in terms of integrated electrochemical platforms that include mainly microfluidic- based approaches and smartphone and Internet-of-things (IoT) and Internet-of-Medical-Things (IoMT) integrated systems have been highlighted. Further, the availability of commercial biosensors for the detection of microbial pathogens will be briefed. In the end, the challenges while fabrication of POC biosensors and expected future advances in the field of biosensing have been discussed. The integrated biosensor-based platforms with the IoT/IoMT usually collect the data to track the community spread of infectious diseases which would be beneficial in terms of better preparedness for current and futuristic pandemics and is expected to prevent social and economic losses.
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Affiliation(s)
- Arpana Parihar
- Industrial Waste Utilization, Nano and Biomaterials, CSIR‐Advanced Materials and Processes Research Institute (AMPRI)BhopalMadhya PradeshIndia
| | - Shalu Yadav
- Industrial Waste Utilization, Nano and Biomaterials, CSIR‐Advanced Materials and Processes Research Institute (AMPRI)BhopalMadhya PradeshIndia
- Academy of Scientific and Innovative Research (AcSIR)GhaziabadIndia
| | - Mohd Abubakar Sadique
- Industrial Waste Utilization, Nano and Biomaterials, CSIR‐Advanced Materials and Processes Research Institute (AMPRI)BhopalMadhya PradeshIndia
- Academy of Scientific and Innovative Research (AcSIR)GhaziabadIndia
| | - Pushpesh Ranjan
- Industrial Waste Utilization, Nano and Biomaterials, CSIR‐Advanced Materials and Processes Research Institute (AMPRI)BhopalMadhya PradeshIndia
- Academy of Scientific and Innovative Research (AcSIR)GhaziabadIndia
| | - Neeraj Kumar
- Industrial Waste Utilization, Nano and Biomaterials, CSIR‐Advanced Materials and Processes Research Institute (AMPRI)BhopalMadhya PradeshIndia
- Academy of Scientific and Innovative Research (AcSIR)GhaziabadIndia
| | - Ayushi Singhal
- Industrial Waste Utilization, Nano and Biomaterials, CSIR‐Advanced Materials and Processes Research Institute (AMPRI)BhopalMadhya PradeshIndia
- Academy of Scientific and Innovative Research (AcSIR)GhaziabadIndia
| | - Vedika Khare
- School of Nanotechnology, UTD, RGPV CampusBhopalMadhya PradeshIndia
| | - Raju Khan
- Industrial Waste Utilization, Nano and Biomaterials, CSIR‐Advanced Materials and Processes Research Institute (AMPRI)BhopalMadhya PradeshIndia
- Academy of Scientific and Innovative Research (AcSIR)GhaziabadIndia
| | - Sathish Natarajan
- Industrial Waste Utilization, Nano and Biomaterials, CSIR‐Advanced Materials and Processes Research Institute (AMPRI)BhopalMadhya PradeshIndia
- Academy of Scientific and Innovative Research (AcSIR)GhaziabadIndia
| | - Avanish K. Srivastava
- Industrial Waste Utilization, Nano and Biomaterials, CSIR‐Advanced Materials and Processes Research Institute (AMPRI)BhopalMadhya PradeshIndia
- Academy of Scientific and Innovative Research (AcSIR)GhaziabadIndia
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12
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Saffari Z, Sepahi M, Ahangari-Cohan R, Khoobi M, Hamidi-Fard M, Ghavidel A, Aghasadeghi MR, Norouzian D. A quartz crystal microbalance biosensor based on polyethylenimine-modified gold electrode to detect hepatitis B biomarker. Anal Biochem 2023; 661:114981. [PMID: 36400147 DOI: 10.1016/j.ab.2022.114981] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/04/2022] [Revised: 10/25/2022] [Accepted: 11/07/2022] [Indexed: 11/17/2022]
Abstract
Biomarkers-based QCM-biosensors are suitable tools for the label-free detection of infectious diseases. In the current study, a QCM-biosensor was developed for the detection of HBsAg. Briefly, anti-HBsAg antibodies were covalently bound to the primary amines after PEI and thiolated-PEI surface modifications of gold-electrode. After RSM optimization, the statistical analysis revealed no significant difference between the immobilization yields of modified layers. Therefore, the PEI-modified QCM-biosensor was selected for further analysis. The PEI-surface was evaluated by FESEM, AFM, ATR-FTIR, and CA measurement. The surface hydrophilicity and its roughness were increased after PEI-coating. Also, FTIR confirmed the PEI-layering on the gold-surface. RSM optimization increased the antibody immobilization yield up to 80%. The QCM-biosensor showed noteworthy results with a wide dynamic range of 1-1 × 103 ng/mL, LOD of 3.14 ng/mL, LOQ of 9.52 ng/mL, and detection capability in human-sera, which were comparable with the ELISA. The mean accuracy of the QCM-biosensor was obtained at 91% when measured by the spike recovery test using human-sera. The biosensor was completely regenerated using 50 mM NaOH and 1% SDS. The benefits provided by the developed biosensor such as broad dynamic range, sensitivity, selectivity, stability, regenerate ability, and low cost suggest its potential application for the non-invasive and timely monitoring of HBV-biomarker.
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Affiliation(s)
- Zahra Saffari
- Nanobiotechnology Department, New Technologies Research Group, Pasteur Institute of Iran, Tehran, Iran
| | - Mina Sepahi
- Nanobiotechnology Department, New Technologies Research Group, Pasteur Institute of Iran, Tehran, Iran
| | - Reza Ahangari-Cohan
- Nanobiotechnology Department, New Technologies Research Group, Pasteur Institute of Iran, Tehran, Iran
| | - Mehdi Khoobi
- Departments of Radio Pharmacy, Faculty of Pharmacy, Tehran University of Medical Sciences, Tehran, Iran; Medical Biomaterials Research Center (MBRC), Faculty of Pharmacy, Tehran University of Medical Sciences, Tehran, Iran
| | | | - Amir Ghavidel
- Physics Department, Sharif University of Technology, Tehran, Iran
| | - Mohammad Reza Aghasadeghi
- Hepatitis and AIDS Department, Pasteur Institute of Iran, Tehran, Iran; Viral Vaccine Research Center, Pasteur Institute of Iran, Tehran, Iran.
| | - Dariush Norouzian
- Nanobiotechnology Department, New Technologies Research Group, Pasteur Institute of Iran, Tehran, Iran.
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13
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Watkin SAJ, Hashemi A, Thomson DR, Pearce FG, Dobson RCJ, Nock VM. Laminar flow-based microfluidic systems for molecular interaction analysis-Part 1: Chip development, system operation and measurement setup. Methods Enzymol 2023; 682:53-100. [PMID: 36948712 DOI: 10.1016/bs.mie.2022.12.001] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/26/2023]
Abstract
The recent advent of laminar flow-based microfluidic systems for molecular interaction analysis has enabled transformative new profiling of proteins in regards to their structure, disordering, complex formation and interactions in general. Based on the diffusive transport of molecules perpendicular to the direction of laminar flow in a microfluidic channel, systems of this type promise continuous-flow, high-throughput screening of complex, multi-molecule interactions, while remaining tolerant to heterogeneous mixtures. Using common microfluidic device processing, the technology provides unique opportunities, as well as device design and experimental challenges, for integrative sample handling approaches that can investigate biomolecular interaction events in complex samples with readily available laboratory equipment. In this first chapter of a two-part series, we introduce system design and experimental setup requirements for a typical laminar flow-based microfluidic system for molecular interaction analysis in the form of what we call the 'LaMInA system' (Laminar flow-based Molecular Interaction Analysis system). We provide microfluidic device development advice on choice of device material, device design, including impact of channel geometry on the signal acquisition, and on design limitations and possible post-fabrication treatments to redress these. Finally. we cover aspects of fluidic actuation, such as selecting, measuring and controlling the flow rate appropriately, and provide a guide to possible fluorescent labels for proteins, as well as options for the fluorescence detection hardware, all in the context of assisting the reader in developing their own laminar flow-based experimental setup for biomolecular interaction analysis.
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Affiliation(s)
- Serena A J Watkin
- Biomolecular Interaction Centre, University of Canterbury, Christchurch, New Zealand; School of Biological Sciences, University of Canterbury, Christchurch, New Zealand
| | - Azadeh Hashemi
- Biomolecular Interaction Centre, University of Canterbury, Christchurch, New Zealand; School of Biological Sciences, University of Canterbury, Christchurch, New Zealand; Department of Electrical & Computer Engineering, University of Canterbury, Christchurch, New Zealand; The MacDiarmid Institute for Advanced Materials and Nanotechnology, Wellington, New Zealand
| | - Dion R Thomson
- Protein Science & Engineering Team, Callaghan Innovation, Christchurch, New Zealand
| | - F Grant Pearce
- Biomolecular Interaction Centre, University of Canterbury, Christchurch, New Zealand; School of Biological Sciences, University of Canterbury, Christchurch, New Zealand.
| | - Renwick C J Dobson
- Biomolecular Interaction Centre, University of Canterbury, Christchurch, New Zealand; School of Biological Sciences, University of Canterbury, Christchurch, New Zealand; The MacDiarmid Institute for Advanced Materials and Nanotechnology, Wellington, New Zealand; Department of Biochemistry and Pharmacology, Bio21 Molecular Science and Biotechnology Institute, University of Melbourne, Parkville, VIC, Australia.
| | - Volker M Nock
- Biomolecular Interaction Centre, University of Canterbury, Christchurch, New Zealand; Department of Electrical & Computer Engineering, University of Canterbury, Christchurch, New Zealand; The MacDiarmid Institute for Advanced Materials and Nanotechnology, Wellington, New Zealand.
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14
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Mousavifar L, Parreira P, Taponard A, Graça VCD, Martins MCL, Roy R. Validation of Selective Capture of Fimbriated Uropathogenic Escherichia coli by a Label-free Engineering Detection System Using Mannosylated Surfaces. ACS APPLIED BIO MATERIALS 2022; 5:5877-5886. [PMID: 36417663 DOI: 10.1021/acsabm.2c00838] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
Abstract
Label-free detection of pathogens is of major concern to the microbiologist community. Most procedures require several steps and amplification techniques. Carbohydrates are well-established receptors for host-pathogen interactions, which can be amplified using glycodendritic architectures on the basis of multivalent binding interactions. Given that uropathogenic Escherichia coli bacterial FimH is based on such mannopyranoside-binding interactions, we demonstrate herein that synthetic monomeric and trimeric thiolated α-d-mannosides can be effectively bound to gold substrate-functionalized self-assembled monolayers (SAMs) preactivated with maleimide functionalities. Mannosides grafted onto SAMs were followed using Quartz Crystal Microbalance with Dissipation (QCM-D). Binding recognition efficiency was first evaluated using the plant lectin from Canavalia ensiformis (ConA) also using QCM-D. We showed a direct correlation between the amount of mannoside bound and the lectin attachment. Even though there was less trimer bound (nM/cm2) to the surface, we observed a 7-fold higher amount of lectin anchoring, thus further demonstrating the value of the multivalent interactions. We next examined the relative fimbriated E. coli selective adhesion/capture to either the monomeric or the trimeric mannoside bound to the surface. Our results established the successful engineering of the surfaces to show E. coli adhesion via specific mannopyranoside binding but unexpectedly, the monomeric derivative was more efficient than the trimeric analog, which could be explained by steric hindrance. This approach strongly suggests that it could be broadly applicable to other Gram-negative bacteria sharing analogous carbohydrate-dependent binding interactions.
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Affiliation(s)
- Leila Mousavifar
- Glycosciences and Nanomaterials Laboratory, Department of Chemistry, Université du Québec à Montréal, P.O. Box 8888, Succ. Centre-Ville, Montréal, Québec H3C 3P8, Canada
| | - Paula Parreira
- i3S, Instituto de Investigação e Inovação em Saúde, Universidade do Porto, Rua Alfredo Allen, 208, 4200-135 Porto, Portugal.,INEB, Instituto de Engenharia Biomédica, Universidade do Porto, 4200-135 Porto, Portugal
| | - Alexis Taponard
- Glycosciences and Nanomaterials Laboratory, Department of Chemistry, Université du Québec à Montréal, P.O. Box 8888, Succ. Centre-Ville, Montréal, Québec H3C 3P8, Canada
| | - Vanessa C D Graça
- INEB, Instituto de Engenharia Biomédica, Universidade do Porto, 4200-135 Porto, Portugal
| | - M Cristina L Martins
- i3S, Instituto de Investigação e Inovação em Saúde, Universidade do Porto, Rua Alfredo Allen, 208, 4200-135 Porto, Portugal.,INEB, Instituto de Engenharia Biomédica, Universidade do Porto, 4200-135 Porto, Portugal.,ICBAS, Instituto de Ciências Biomédicas Abel Salazar, Universidade do Porto, 4200-135 Porto, Portugal
| | - René Roy
- Glycosciences and Nanomaterials Laboratory, Department of Chemistry, Université du Québec à Montréal, P.O. Box 8888, Succ. Centre-Ville, Montréal, Québec H3C 3P8, Canada
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15
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Baldina AA, Pershina LV, Noskova UV, Nikitina AA, Muravev AA, Skorb EV, Nikolaev KG. Uricase Crowding via Polyelectrolyte Layers Coacervation for Carbon Fiber-Based Electrochemical Detection of Uric Acid. Polymers (Basel) 2022; 14:5145. [PMID: 36501541 PMCID: PMC9739113 DOI: 10.3390/polym14235145] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/07/2022] [Revised: 11/21/2022] [Accepted: 11/24/2022] [Indexed: 11/30/2022] Open
Abstract
Urate oxidase (UOx) surrounded by synthetic macromolecules, such as polyethyleneimine (PEI), poly(allylamine hydrochloride) (PAH), and poly(sodium 4-styrenesulfonate) (PSS) is a convenient model of redox-active biomacromolecules in a crowded environment and could display high enzymatic activity towards uric acid, an important marker of COVID-19 patients. In this work, the carbon fiber electrode was modified with Prussian blue (PB) redox mediator, UOx layer, and a layer-by-layer assembled polyelectrolyte film, which forms a complex coacervate consisting of a weakly charged polyelectrolyte (PEI or PAH) and a highly charged one (PSS). The film deposition process was controlled by cyclic voltammetry and scanning electron microscopy coupled with energy-dispersive X-ray analysis (at the stage of PB deposition) and through quartz crystal microbalance technique (at latter stages) revealed uniform distribution of the polyelectrolyte layers. Variation of the polyelectrolyte film composition derived the following statements. (1) There is a linear correlation between electrochemical signal and concentration of uric acid in the range of 10-4-10-6 M. (2) An increase in the number of polyelectrolyte layers provides more reproducible values for uric acid concentration in real urine samples of SARS-CoV-2 patients measured by electrochemical enzyme assay, which are comparable to those of spectrophotometric assay. (3) The PAH/UOx/PSS/(PAH/PSS)2-coated carbon fiber electrode displays the highest sensitivity towards uric acid. (4) There is a high enzyme activity of UOx immobilized into the hydrogel nanolayer (values of the Michaelis-Menten constant are up to 2 μM) and, consequently, high affinity to uric acid.
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Affiliation(s)
| | | | | | | | | | - Ekaterina V. Skorb
- Infochemistry Scientific Center, ITMO University, 191002 Saint Petersburg, Russia
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16
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Freezing-induced chemical crosslinking to fabricate nanocellulose-based cryogels for efficient bilirubin removal. Sep Purif Technol 2022. [DOI: 10.1016/j.seppur.2022.121865] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
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17
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Nezammahalleh H, Ghanati F, Rezaei S, Badshah MA, Park J, Abbas N, Ali A. Biochemical Interactions through Microscopic Techniques: Structural and Molecular Characterization. Polymers (Basel) 2022; 14:2853. [PMID: 35890632 PMCID: PMC9318543 DOI: 10.3390/polym14142853] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/08/2022] [Revised: 07/06/2022] [Accepted: 07/06/2022] [Indexed: 11/17/2022] Open
Abstract
Many researchers and scientists have contributed significantly to provide structural and molecular characterizations of biochemical interactions using microscopic techniques in the recent decade, as these biochemical interactions play a crucial role in the production of diverse biomaterials and the organization of biological systems. The properties, activities, and functionalities of the biomaterials and biological systems need to be identified and modified for different purposes in both the material and life sciences. The present study aimed to review the advantages and disadvantages of three main branches of microscopy techniques (optical microscopy, electron microscopy, and scanning probe microscopy) developed for the characterization of these interactions. First, we explain the basic concepts of microscopy and then the breadth of their applicability to different fields of research. This work could be useful for future research works on biochemical self-assembly, biochemical aggregation and localization, biological functionalities, cell viability, live-cell imaging, material stability, and membrane permeability, among others. This understanding is of high importance in rapid, inexpensive, and accurate analysis of biochemical interactions.
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Affiliation(s)
- Hassan Nezammahalleh
- Faculty of Biological Science, Tarbiat Modares University, Tehran 14115-111, Iran; (H.N.); (F.G.)
- Research and Development Department, Hamyarapply Group, Tehran 14115-111, Iran
| | - Faezeh Ghanati
- Faculty of Biological Science, Tarbiat Modares University, Tehran 14115-111, Iran; (H.N.); (F.G.)
| | - Shima Rezaei
- Department of Microbiology, Faculty of Biological Science, Ardebil Branch, Islamic Azad University, Ardebil 5615731567, Iran;
| | - Mohsin Ali Badshah
- Department of Chemical and Biomolecular Engineering, University of California-Irvine, Irvine, CA 92697, USA;
| | - Joobee Park
- Plamica Labs, Batten Hall, 125 Western Ave, Allston, MA 02163, USA;
| | - Naseem Abbas
- Department of Mechanical Engineering, Sejong University, Seoul 05006, Korea
| | - Ahsan Ali
- Department of Mechanical Engineering, Gachon University, Seongnam-si 13120, Korea
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18
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Liu J, Zhao W, Liu J, Cai X, Liang D, Tang S, Xu B. Preparation of a quartz microbalance sensor based on molecularly imprinted polymers and its application in formaldehyde detection. RSC Adv 2022; 12:13235-13241. [PMID: 35520113 PMCID: PMC9063693 DOI: 10.1039/d2ra01705a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/16/2022] [Accepted: 04/27/2022] [Indexed: 11/21/2022] Open
Abstract
Quartz crystal microbalances (QCMs) have been widely used in the food industry, environmental monitoring, and biomedicine. Here, a molecularly imprinted QCM sensor was prepared and used for formaldehyde detection. Using polyvinyl chloride as the embedding material and tetrahydrofuran as the solvent, a QCM electrode was modified with HCHO molecularly imprinted polymers (HCHO-MIPs). The detection conditions of the sensor were optimized, and its selectivity was investigated. The theoretical calculation results revealed that the acrylamide and pentaerythritol triacrylate were potential candidate functional monomer and cross-linking agent, respectively, in the preparation of HCHO-MIPs with high adsorbability, superselectivity, and stability. According to the calculated results, a sensor had been prepared. When the pH was 7, the added mass of the HCHO-MIPs (or NIPs) was 20 mg, and the amount of PVC coating was 20 μL, the sensor exhibited good adsorption, selectivity, repeatability, high sensitivity, high accuracy, and a short response time. The lowest detection limit was 10.72 ng mL-1. The sensor exhibited higher selectivity for HCHO than for propionaldehyde and benzaldehyde. The HCHO contents in fresh shrimp samples were detected using the sensor for four cycles, and the detection rates were in the range of 97.56-98.60%. This study provided a theoretical and experimental basis for the rapid detection of HCHO.
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Affiliation(s)
- Junbo Liu
- College of Resources and Environment, Key Laboratory of Straw Biology and Utilization, Ministry of Education, Jilin Agricultural University Changchun 130118 China
| | - Wensi Zhao
- State Key Laboratory of Environmental Criteria and Risk Assessment, Chinese Research Academy of Environmental Sciences Beijing China
| | - Jin Liu
- College of Resources and Environment, Key Laboratory of Straw Biology and Utilization, Ministry of Education, Jilin Agricultural University Changchun 130118 China
| | - Xuhong Cai
- College of Resources and Environment, Key Laboratory of Straw Biology and Utilization, Ministry of Education, Jilin Agricultural University Changchun 130118 China
| | - Dadong Liang
- College of Resources and Environment, Key Laboratory of Straw Biology and Utilization, Ministry of Education, Jilin Agricultural University Changchun 130118 China
| | - Shanshan Tang
- College of Resources and Environment, Key Laboratory of Straw Biology and Utilization, Ministry of Education, Jilin Agricultural University Changchun 130118 China
| | - Bao Xu
- Institute of Mathematica, Jilin Normal University Siping Jilin 136000 China
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Wu C, Tang R, Li H, Liu X, Fu L, Yu Y, Wan C. Interaction between organic matter and tetracycline in river sediments in cold regions. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2022; 29:24941-24950. [PMID: 34826078 DOI: 10.1007/s11356-021-17682-1] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/23/2021] [Accepted: 11/17/2021] [Indexed: 06/13/2023]
Abstract
In this study, the interaction between river sediments collected from cold regions and typical antibiotics was investigated. The results show that tetracycline addition to the sediment can promote the fluorescence quenching of protein-like, marine humic acid, and humic acid-like substances. The degree of quenching increased with the increase of tetracycline concentration (0-80 μM). The fluorescence quenching degree of protein-like, marine humic acid, and humic acid-like substances is as high as 94.76%, 70.19%, and 77.80%, respectively. In addition, the process belongs to static quenching, and a ground-state complex is formed during the quenching reaction. The number of binding sites of tetracycline and protein-like, marine humic acid, and humic acid-like substances is 1.30, 1.51, and 1.34, respectively. The order of the strength of the formed complex is marine-like humic acid, protein-like, and humic acid-like substrates. The secondary structure of protein-like substrate in the sediment organic matter includes three types: aggregated strands, β-Sheet, and α-helix; and the content ratios are 10.23%, 8.33%, and 81.44%, respectively. When the concentration of tetracycline increased to 80 μM, the content of β-sheet increased significantly, while the content of α-helix decreased significantly. 2D-COS analysis showed that the reaction sequence of organic functional groups and tetracycline in the sediment was phenolic hydroxyl group, fatty group of amino acid structure, nonfluorescent polysaccharide, and protein-like α-helix substrates. After tetracycline interacts with water-extractable organic matters (WEOM), the structure of WEOM becomes compact, and its adsorption capacity on the surface of minerals is significantly reduced, resulting in an increase in the fluidity of tetracycline in the water environment.
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Affiliation(s)
- Changyong Wu
- Research Center of Environmental Pollution Control Technology, Chinese Research Academy of Environmental Sciences, Beijing, 100012, China.
| | - Rui Tang
- Department of Environmental Science and Engineering, Fudan University, Shanghai, 200438, China
| | - Huiqi Li
- Department of Environmental Science and Engineering, Fudan University, Shanghai, 200438, China
| | - Xiang Liu
- Department of Environmental Science and Engineering, Fudan University, Shanghai, 200438, China
| | - Liya Fu
- Research Center of Environmental Pollution Control Technology, Chinese Research Academy of Environmental Sciences, Beijing, 100012, China
| | - Yin Yu
- Research Center of Environmental Pollution Control Technology, Chinese Research Academy of Environmental Sciences, Beijing, 100012, China
| | - Chunli Wan
- Department of Environmental Science and Engineering, Fudan University, Shanghai, 200438, China.
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21
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Wu C, Fu L, Wang Y, Wan C. Real-time changes of the adsorption process and conformation of marine dissolved organic matters on the solid-liquid interface. CHEMOSPHERE 2022; 289:133140. [PMID: 34863728 DOI: 10.1016/j.chemosphere.2021.133140] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/27/2021] [Revised: 11/23/2021] [Accepted: 11/29/2021] [Indexed: 06/13/2023]
Abstract
In this study, the adsorption characteristics of marine dissolved organic matters (MDOMs) on the solid-liquid interface in the coastal waters was investigated. The results showed that the organic macromolecules with adsorption ability in MDOMs are not rigid molecules. However, the macromolecules have viscoelasticity properties. At different dilution ratios, the MDOMs adsorption process includes rapid (0-200 s) and slow adsorption (200 s later) periods. MDOMs adsorption in the solid-liquid interface is a dynamic process in which adsorption and hydration occur simultaneously. MDOMs concentration is an important driving force for adsorption. The three macromolecules of acid polysaccharides, protein-like, and polycarboxylate-type humic acids in MDOMs are rich in functional groups and they have the ability to absorb to solid surface. Acidic polysaccharides exhibit a sustained adsorption ability, while the adsorption of other macromolecules occurred only in the initial rapid adsorption period. In addition, the acid polysaccharides show weak thixotropy during the adsorption process. It would cause the stretching of macromolecular structure of the adsorption layer, enhancing the hydration of the adsorption layer. The study shows the adsorption process of MDOMs at the solid-liquid interface and the structural characteristics of the adsorption layer. It can provide helpful information for the inhibition and removal of MDOMs pollution during the actual development of marine resources.
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Affiliation(s)
- Changyong Wu
- Research Center of Environmental Pollution Control Technology, Chinese Research Academy of Environmental Sciences, Beijing, 100012, China
| | - Liya Fu
- Research Center of Environmental Pollution Control Technology, Chinese Research Academy of Environmental Sciences, Beijing, 100012, China
| | - Yue Wang
- Research Center of Environmental Pollution Control Technology, Chinese Research Academy of Environmental Sciences, Beijing, 100012, China
| | - Chunli Wan
- Department of Environmental Science and Engineering, Fudan University, Shanghai, 200433, China.
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22
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Analysis of crystallization and deposition process using electrochemical-quartz crystal microbalance: A review. J Electroanal Chem (Lausanne) 2022. [DOI: 10.1016/j.jelechem.2021.115936] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
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23
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A novel near-infrared viscosity probe based on synergistic effect of AIE property and molecular rotors for mitophagy imaging during liver injury. Anal Chim Acta 2021; 1187:339146. [PMID: 34753564 DOI: 10.1016/j.aca.2021.339146] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/26/2021] [Revised: 09/28/2021] [Accepted: 10/03/2021] [Indexed: 11/21/2022]
Abstract
Mitophagy, a specialized form of autophagy, holds the key to cellular metabolism and physiology. Viscosity is a significant marker for visualization of the mitophagy process in real-time. Hence, development of well-performing viscosity probe is beneficial to study mitophagy-related dynamic physiological and pathological processes. Here, a new strategy was proposed by combination of AIE property and molecular rotors to design novel viscosity probe. The probe named TPA-Py was obtained by Knoevenagel condensation reaction of AIE unit and pyridine salt, which giving the probe excellent near-infrared emission, good water-solubility and mitochondrial targeting ability. Most importantly, TPA-Py owns two rotatable parts of triphenylamine and double bond, enabling the probe to equip with AIE property and sensitive recognition units for viscosity. With the environmental viscosity increasing, the rotation of the molecular rotor and the AIE unit is restricted effectively, the probe displayed strong fluorescence. Then, TPA-Py was successfully employed for monitoring the mitophagy process in A549 cells by imaging viscosity alterations. As mitophagy constitutes an important consideration in the pathogenesis of drug-induced liver injury, TPA-Py was also applied to explore the variation of viscosity in production and remediation pathways of APAP-induced liver injury. These results demonstrated that TPA-Py was a highly sensitive viscosity probe which holds great potential of biological applications.
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Lay HT, Yeow RJE, Ma Y, Zydney AL, Wang R, Chew JW. Internal membrane fouling by proteins during microfiltration. J Memb Sci 2021. [DOI: 10.1016/j.memsci.2021.119589] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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25
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Li DM, Li SQ, Huang JY, Yan YL, Zhang SY, Tang XH, Fan J, Zheng SR, Zhang WG, Cai SL. A recyclable bipyridine-containing covalent organic framework-based QCM sensor for detection of Hg(II) ion in aqueous solution. J SOLID STATE CHEM 2021. [DOI: 10.1016/j.jssc.2021.122421] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
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26
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Priglinger E, Strasser J, Buchroithner B, Weber F, Wolbank S, Auer D, Grasmann E, Arzt C, Sivun D, Grillari J, Jacak J, Preiner J, Gimona M. Label-free characterization of an extracellular vesicle-based therapeutic. J Extracell Vesicles 2021; 10:e12156. [PMID: 34669269 PMCID: PMC8528092 DOI: 10.1002/jev2.12156] [Citation(s) in RCA: 25] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/22/2020] [Revised: 08/25/2021] [Accepted: 09/23/2021] [Indexed: 12/25/2022] Open
Abstract
Interest in mesenchymal stem cell derived extracellular vesicles (MSC-EVs) as therapeutic agents has dramatically increased over the last decade. Current approaches to the characterization and quality control of EV-based therapeutics include particle tracking techniques, Western blotting, and advanced cytometry, but standardized methods are lacking. In this study, we established and verified quartz crystal microbalance (QCM) as highly sensitive label-free immunosensing technique for characterizing clinically approved umbilical cord MSC-EVs enriched by tangential flow filtration and ultracentrifugation. Using QCM in conjunction with common characterization methods, we were able to specifically detect EVs via EV (CD9, CD63, CD81) and MSC (CD44, CD49e, CD73) markers. Furthermore, analysis of QCM dissipation versus frequency allowed us to quantitatively determine the ratio of marker-specific EVs versus non-vesicular particles (NVPs) - a parameter that cannot be obtained by any other technique so far. Additionally, we characterized the topography and elasticity of these EVs by atomic force microscopy (AFM), enabling us to distinguish between EVs and NVPs in our EV preparations. This measurement modality makes it possible to identify EV sub-fractions, discriminate between EVs and NVPs, and to characterize EV surface proteins, all with minimal sample preparation and using label-free measurement devices with low barriers of entry for labs looking to widen their spectrum of characterization techniques. Our combination of QCM with impedance measurement (QCM-I) and AFM measurements provides a robust multi-marker approach to the characterization of clinically approved EV therapeutics and opens the door to improved quality control.
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Affiliation(s)
- Eleni Priglinger
- AUVA Research CenterLudwig Boltzmann Institute for Experimental and Clinical TraumatologyLinz/ViennaAustria
- Austrian Cluster for Tissue RegenerationViennaAustria
| | - Juergen Strasser
- School of Medical Engineering and Applied Social ScienceUniversity of Applied Sciences Upper AustriaLinzAustria
- Austrian Cluster for Tissue RegenerationViennaAustria
| | - Boris Buchroithner
- School of Medical Engineering and Applied Social ScienceUniversity of Applied Sciences Upper AustriaLinzAustria
- Austrian Cluster for Tissue RegenerationViennaAustria
| | - Florian Weber
- School of Medical Engineering and Applied Social ScienceUniversity of Applied Sciences Upper AustriaLinzAustria
- Austrian Cluster for Tissue RegenerationViennaAustria
| | - Susanne Wolbank
- AUVA Research CenterLudwig Boltzmann Institute for Experimental and Clinical TraumatologyLinz/ViennaAustria
- Austrian Cluster for Tissue RegenerationViennaAustria
| | - Daniela Auer
- GMP UnitSpinal Cord Injury and Tissue Regeneration Center Salzburg (SCI‐TReCS)Paracelsus Medical UniversitySalzburgAustria
- Research Program “Nanovesicular Therapies”Paracelsus Medical UniversitySalzburgAustria
| | - Eva Grasmann
- Transfer Center for Extracellular Vesicles Theralytic Technologies (EV‐TT)Paracelsus Medical UniversitySalzburgAustria
| | - Claudia Arzt
- Transfer Center for Extracellular Vesicles Theralytic Technologies (EV‐TT)Paracelsus Medical UniversitySalzburgAustria
| | - Dmitry Sivun
- School of Medical Engineering and Applied Social ScienceUniversity of Applied Sciences Upper AustriaLinzAustria
- Austrian Cluster for Tissue RegenerationViennaAustria
| | - Johannes Grillari
- AUVA Research CenterLudwig Boltzmann Institute for Experimental and Clinical TraumatologyLinz/ViennaAustria
- Austrian Cluster for Tissue RegenerationViennaAustria
- Dept. of BiotechnologyBOKU – University of Natural Resources and Life SciencesInstitute of Molecular BiotechnologyViennaAustria
| | - Jaroslaw Jacak
- School of Medical Engineering and Applied Social ScienceUniversity of Applied Sciences Upper AustriaLinzAustria
- Austrian Cluster for Tissue RegenerationViennaAustria
| | - Johannes Preiner
- School of Medical Engineering and Applied Social ScienceUniversity of Applied Sciences Upper AustriaLinzAustria
- Austrian Cluster for Tissue RegenerationViennaAustria
| | - Mario Gimona
- GMP UnitSpinal Cord Injury and Tissue Regeneration Center Salzburg (SCI‐TReCS)Paracelsus Medical UniversitySalzburgAustria
- Research Program “Nanovesicular Therapies”Paracelsus Medical UniversitySalzburgAustria
- Austrian Cluster for Tissue RegenerationViennaAustria
- Transfer Center for Extracellular Vesicles Theralytic Technologies (EV‐TT)Paracelsus Medical UniversitySalzburgAustria
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Jiang D, Zhao X, Liu YN, Chen HB, Lv WL, Qian C, Liu XW. Label-Free Probing of Molecule Binding Kinetics Using Single-Particle Interferometric Imaging. Anal Chem 2021; 93:7965-7969. [PMID: 34029055 DOI: 10.1021/acs.analchem.1c00828] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/13/2023]
Abstract
Probing molecular interactions is critical for screening drugs, detecting pollutants, and understanding biological processes at the molecular level, but these interactions are difficult to detect, especially for small molecules. A label-free optical imaging technology that can detect molecule binding kinetics is presented, in which free-moving particles are driven into oscillations with an alternating electrical field and the interferometric scattering patterns of the particles are imaged via an optical imaging method. By tracking the charge-sensitive variations in the oscillation amplitude with sub-nanometer precision, the small molecules and metal ions binding to the surface as well as protein-protein binding kinetics were measured. The capability of the label-free measurement of molecular interactions can provide a promising platform for screening small-molecule drugs, probing conformational changes in proteins, and detecting environmental pollutants.
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Affiliation(s)
- Di Jiang
- Department of Applied Chemistry, University of Science and Technology of China, Hefei 230026, China
| | - Xiaona Zhao
- Chinese Academy of Sciences Key Laboratory of Urban Pollutant Conversion, Hefei National Laboratory for Physical Sciences at the Microscale, Department of Environmental Science and Engineering, University of Science and Technology of China, Hefei 230026, China
| | - Yi-Nan Liu
- Chinese Academy of Sciences Key Laboratory of Urban Pollutant Conversion, Hefei National Laboratory for Physical Sciences at the Microscale, Department of Environmental Science and Engineering, University of Science and Technology of China, Hefei 230026, China
| | - Hai-Bo Chen
- Department of Applied Chemistry, University of Science and Technology of China, Hefei 230026, China
| | - Wen-Li Lv
- Chinese Academy of Sciences Key Laboratory of Urban Pollutant Conversion, Hefei National Laboratory for Physical Sciences at the Microscale, Department of Environmental Science and Engineering, University of Science and Technology of China, Hefei 230026, China
| | - Chen Qian
- Chinese Academy of Sciences Key Laboratory of Urban Pollutant Conversion, Hefei National Laboratory for Physical Sciences at the Microscale, Department of Environmental Science and Engineering, University of Science and Technology of China, Hefei 230026, China
| | - Xian-Wei Liu
- Department of Applied Chemistry, University of Science and Technology of China, Hefei 230026, China.,Chinese Academy of Sciences Key Laboratory of Urban Pollutant Conversion, Hefei National Laboratory for Physical Sciences at the Microscale, Department of Environmental Science and Engineering, University of Science and Technology of China, Hefei 230026, China
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Zhang J, Zhang X, Wei X, Xue Y, Wan H, Wang P. Recent advances in acoustic wave biosensors for the detection of disease-related biomarkers: A review. Anal Chim Acta 2021; 1164:338321. [PMID: 33992219 DOI: 10.1016/j.aca.2021.338321] [Citation(s) in RCA: 19] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/15/2020] [Revised: 02/05/2021] [Accepted: 02/09/2021] [Indexed: 02/08/2023]
Abstract
In the past several decades, acoustic wave biosensors, as an emerging kind of biosensors, have been developed and widely used for the detection of mass, viscosity, conductivity and density. Varieties of applications have been explored such as medical diagnosis, drug screening, environmental monitoring, food analysis and biochemical assay. Among them, the detection of disease-related biomarkers based on acoustic sensors has aroused great research interest all over the world. In this review, the classification and characteristics of acoustic wave biosensors are briefly introduced. Then, some classical studies and recent advances in disease-related biomarker detection utilizing these biosensors are summarized and detailed, respectively. Here, the disease-related biomarkers mainly include antigens, small molecular proteins, cancer cells, viruses and VOCs. Finally, challenges and future trends of these typical acoustic wave biosensors are discussed. Compared with other reviews of acoustic wave sensors, this review highlights the great potential of typical acoustic wave biosensors for early disease screening and diagnosis compared with widely-used medical imaging. Moreover, they are integrated with other technologies for the design of multi-analyte, multi-parameter and intelligent devices, collecting more comprehensive information from biomarkers. This review provides a new perspective on the applications and optimization of acoustic wave biosensors to develop more reliable platforms for disease-related biomarker detection and disease diagnosis.
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Affiliation(s)
- Junyu Zhang
- Biosensor National Special Laboratory, Key Laboratory for Biomedical Engineering of Education Ministry, Department of Biomedical Engineering, Zhejiang University, Hangzhou, 310027, China; State Key Laboratory of Transducer Technology, Chinese Academy of Sciences, Shanghai, 200050, China
| | - Xiaojing Zhang
- Biosensor National Special Laboratory, Key Laboratory for Biomedical Engineering of Education Ministry, Department of Biomedical Engineering, Zhejiang University, Hangzhou, 310027, China
| | - Xinwei Wei
- Biosensor National Special Laboratory, Key Laboratory for Biomedical Engineering of Education Ministry, Department of Biomedical Engineering, Zhejiang University, Hangzhou, 310027, China
| | - Yingying Xue
- Biosensor National Special Laboratory, Key Laboratory for Biomedical Engineering of Education Ministry, Department of Biomedical Engineering, Zhejiang University, Hangzhou, 310027, China
| | - Hao Wan
- Biosensor National Special Laboratory, Key Laboratory for Biomedical Engineering of Education Ministry, Department of Biomedical Engineering, Zhejiang University, Hangzhou, 310027, China; State Key Laboratory of Transducer Technology, Chinese Academy of Sciences, Shanghai, 200050, China
| | - Ping Wang
- Biosensor National Special Laboratory, Key Laboratory for Biomedical Engineering of Education Ministry, Department of Biomedical Engineering, Zhejiang University, Hangzhou, 310027, China; State Key Laboratory of Transducer Technology, Chinese Academy of Sciences, Shanghai, 200050, China.
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29
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Yu K, Pan J, Husamelden E, Zhang H, He Q, Wei Y, Tian M. Aggregation-induced Emission Based Fluorogens for Mitochondria-targeted Tumor Imaging and Theranostics. Chem Asian J 2020; 15:3942-3960. [PMID: 33025759 DOI: 10.1002/asia.202001100] [Citation(s) in RCA: 21] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/13/2020] [Revised: 10/02/2020] [Indexed: 12/15/2022]
Abstract
Occurrence and development of cancer are multifactorial and multistep processes which involve complicated cellular signaling pathways. Mitochondria, as the energy producer in cells, play key roles in tumor cell growth and division. Since mitochondria of tumor cells have a more negative membrane potential than those of normal cells, several fluorescent imaging probes have been developed for mitochondria-targeted imaging and photodynamic therapy. Conventional fluorescent dyes suffer from aggregation-caused quenching effect, while novel aggregation-induced emission (AIE) probes are ideal candidates for biomedical applications due to their large stokes shift, strong photo-bleaching resistance, and high quantum yield. This review aims to introduce the recent advances in the design and application of mitochondria-targeted AIE probes. The comprehensive review focuses on the structure-property relationship of these imaging probes, expecting to inspire the development of more practical and versatile AIE fluorogens (AIEgens) as tumor imaging and therapy agents for preclinical and clinical use.
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Affiliation(s)
- Kaiwu Yu
- College of Chemical and Biological Engineering, Zhejiang University, Hangzhou, Zhejiang Province, 310027, P. R. China
| | - Jiayue Pan
- Department of Nuclear Medicine and PET-CT Center, The Second Hospital of Zhejiang University School of Medicine, Hangzhou, Zhejiang Province, 310009, P. R. China
| | - Elkawad Husamelden
- Department of Nuclear Medicine and PET-CT Center, The Second Hospital of Zhejiang University School of Medicine, Hangzhou, Zhejiang Province, 310009, P. R. China
| | - Hong Zhang
- Department of Nuclear Medicine and PET-CT Center, The Second Hospital of Zhejiang University School of Medicine, Hangzhou, Zhejiang Province, 310009, P. R. China
| | - Qinggang He
- College of Chemical and Biological Engineering, Zhejiang University, Hangzhou, Zhejiang Province, 310027, P. R. China
| | - Yen Wei
- Department of Chemistry and the Tsinghua Center for Frontier Polymer Research, Tsinghua University, Beijing, 100084, P. R. China
| | - Mei Tian
- Department of Nuclear Medicine and PET-CT Center, The Second Hospital of Zhejiang University School of Medicine, Hangzhou, Zhejiang Province, 310009, P. R. China
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30
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Recent advances in aptasensors for mycotoxin detection: On the surface and in the colloid. Talanta 2020; 223:121729. [PMID: 33303172 DOI: 10.1016/j.talanta.2020.121729] [Citation(s) in RCA: 32] [Impact Index Per Article: 6.4] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/21/2020] [Revised: 09/22/2020] [Accepted: 09/29/2020] [Indexed: 01/08/2023]
Abstract
Mycotoxins are a great potential threat to human health, and the progress in the development of mycotoxin detection methods is of an escalating importance with the increasing emphasis on food safety. Aptamer, performing the same function as antibody in specific binding with targets, exhibits profound potential in biosensing since its debut in 1990. Recent years have witnessed the rapid development of aptasensors for mycotoxin detection with the achievement of ultralow limit of detection and high sensitivity in the lab. However, there is still no officially approved aptasensing methods in mycotoxin detection application. In order to provide researchers with inspirations in the design and development of aptasensors for mycotoxin detection, we divide these aptasensors into two types, namely "on the surface" and "in the colloid", according to the location where the key sensing reaction occurs. We also systematically review aptasensors reported in the past 5 years under the abovementioned criterion of classification, and compare the advantages and disadvantages of each kind of aptasensors. Finally, we discuss prospective directions in the development of aptasensors for mycotoxin detection. This paper will offer insight and motivation to practitioners working on the research and practical application of aptasensors in the detection of mycotoxins and other substances.
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31
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Santos HM, Tsai CY, Catulin GEM, Trangia KCG, Tayo LL, Liu HJ, Chuang KP. Common bacterial, viral, and parasitic diseases in pigeons (Columba livia): A review of diagnostic and treatment strategies. Vet Microbiol 2020; 247:108779. [PMID: 32768225 DOI: 10.1016/j.vetmic.2020.108779] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/27/2020] [Revised: 06/20/2020] [Accepted: 06/22/2020] [Indexed: 02/07/2023]
Abstract
Pigeons (Columba livia) have been associated with humans for a long time now. They are raised for sport (pigeon race), exhibition (display of fancy breeds), food, and research. Most of the pigeons kept are Racing Homers, trained to compete in the pigeon race. Other breeds, such as Rollers, Nose Divers, Doneks are bred for their aerial abilities. Incorporation of a good preventive medicine program is one of the most critical factors in averting infectious diseases in pigeon flocks. This review summarizes the common bacterial, viral, and parasitic infections in pigeons. The different clinical signs, symptoms, diagnostic strategies, prevention, and treatments were described in this review. Current researches, molecular diagnostic assays, and treatment strategies such as vaccines and drug candidates were included. The information found in this review can provide insights for veterinarians and researchers studying pigeons to develop effective and efficient immunoprophylactic and diagnostic tools for pigeon diagnosis and therapeutics.
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Affiliation(s)
- Harvey M Santos
- School of Chemical, Biological and Materials Engineering and Sciences, Mapúa University, Manila, 1002, Philippines
| | - Ching-Yi Tsai
- International Program in Animal Vaccine Technology, International College, National Pingtung University of Science and Technology, Pingtung, 912, Taiwan
| | - Gail Everette M Catulin
- School of Chemical, Biological and Materials Engineering and Sciences, Mapúa University, Manila, 1002, Philippines
| | - Kim Chloe G Trangia
- School of Chemical, Biological and Materials Engineering and Sciences, Mapúa University, Manila, 1002, Philippines
| | - Lemmuel L Tayo
- School of Chemical, Biological and Materials Engineering and Sciences, Mapúa University, Manila, 1002, Philippines
| | - Hung-Jen Liu
- Institute of Molecular Biology, National Chung Hsing University, Taichung, 402, Taiwan; The iEGG and Animal Biotechnology Center, National Chung Hsing University, Taichung, 402, Taiwan; Rong Hsing Research Center for Translational Medicine, National Chung Hsing University, Taichung, 402, Taiwan; Research Center for Animal Biologics, College of Veterinary Medicine, National Pingtung University of Science and Technology, Pingtung, 912, Taiwan; Ph.D Program in Translational Medicine, National Chung Hsing University, Taichung, 402, Taiwan
| | - Kuo Pin Chuang
- International Program in Animal Vaccine Technology, International College, National Pingtung University of Science and Technology, Pingtung, 912, Taiwan; Graduate Institute of Animal Vaccine Technology, College of Veterinary Medicine, National Pingtung University of Science and Technology, Pingtung, 912, Taiwan; Research Center for Animal Biologics, College of Veterinary Medicine, National Pingtung University of Science and Technology, Pingtung, 912, Taiwan.
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32
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Li L, Wang C, Nie Y, Yao B, Hu H. Nanofabrication enabled lab-on-a-chip technology for the manipulation and detection of bacteria. Trends Analyt Chem 2020. [DOI: 10.1016/j.trac.2020.115905] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/24/2022]
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33
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Minamiki T, Kubota R, Sasaki Y, Asano K, Minami T. Protein Assays on Organic Electronics: Rational Device and Material Designs for Organic Transistor-Based Sensors. ChemistryOpen 2020; 9:573-581. [PMID: 32405448 PMCID: PMC7216454 DOI: 10.1002/open.202000025] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/30/2020] [Revised: 04/22/2020] [Indexed: 01/23/2023] Open
Abstract
Artificial receptor-based protein assays have various attractive features such as a long-term stability, a low-cost production process, and the ease of tuning the target specificity. However, such protein sensors are still immature compared with conventional immunoassays. To enhance the application potential of synthetic sensing materials, organic field-effect transistors (OFETs) are some of the suitable platforms for protein assays because of their solution processability, durability, and compact integration. Importantly, OFETs enable the electrical readout of the protein recognition phenomena of artificial receptors on sensing electrodes. Thus, we believe that OFETs functionalized with artificial protein receptors will be a powerful tool for the on-site analyses of target proteins. In this Minireview, we summarize the recent progress of the OFET-based protein assays including the rational design strategies for devices and sensing materials.
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Affiliation(s)
- Tsukuru Minamiki
- Institute of Industrial ScienceThe University of Tokyo4-6-1 Komaba, Meguro-kuTokyo153-8505Japan
| | - Riku Kubota
- Institute of Industrial ScienceThe University of Tokyo4-6-1 Komaba, Meguro-kuTokyo153-8505Japan
| | - Yui Sasaki
- Institute of Industrial ScienceThe University of Tokyo4-6-1 Komaba, Meguro-kuTokyo153-8505Japan
| | - Koichiro Asano
- Institute of Industrial ScienceThe University of Tokyo4-6-1 Komaba, Meguro-kuTokyo153-8505Japan
| | - Tsuyoshi Minami
- Institute of Industrial ScienceThe University of Tokyo4-6-1 Komaba, Meguro-kuTokyo153-8505Japan
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34
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Didier P, Lobato‐Dauzier N, Clément N, Genot AJ, Sasaki Y, Leclerc É, Minamiki T, Sakai Y, Fujii T, Minami T. Microfluidic System with Extended‐Gate‐Type Organic Transistor for Real‐Time Glucose Monitoring. ChemElectroChem 2020. [DOI: 10.1002/celc.201902013] [Citation(s) in RCA: 16] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
Affiliation(s)
- Pierre Didier
- Institute of Industrial Science The University of Tokyo 4-6-1 Komaba, Meguro-ku Tokyo 153-8505 Japan
- LIMMS/CNRS-IIS (UMI2820) The University of Tokyo 4-6-1 Komaba, Meguro-ku Tokyo 153-8505 Japan
| | - Nicolas Lobato‐Dauzier
- Institute of Industrial Science The University of Tokyo 4-6-1 Komaba, Meguro-ku Tokyo 153-8505 Japan
- LIMMS/CNRS-IIS (UMI2820) The University of Tokyo 4-6-1 Komaba, Meguro-ku Tokyo 153-8505 Japan
| | - Nicolas Clément
- Institute of Industrial Science The University of Tokyo 4-6-1 Komaba, Meguro-ku Tokyo 153-8505 Japan
- LIMMS/CNRS-IIS (UMI2820) The University of Tokyo 4-6-1 Komaba, Meguro-ku Tokyo 153-8505 Japan
| | - Anthony J. Genot
- Institute of Industrial Science The University of Tokyo 4-6-1 Komaba, Meguro-ku Tokyo 153-8505 Japan
- LIMMS/CNRS-IIS (UMI2820) The University of Tokyo 4-6-1 Komaba, Meguro-ku Tokyo 153-8505 Japan
| | - Yui Sasaki
- Institute of Industrial Science The University of Tokyo 4-6-1 Komaba, Meguro-ku Tokyo 153-8505 Japan
| | - Éric Leclerc
- Institute of Industrial Science The University of Tokyo 4-6-1 Komaba, Meguro-ku Tokyo 153-8505 Japan
- LIMMS/CNRS-IIS (UMI2820) The University of Tokyo 4-6-1 Komaba, Meguro-ku Tokyo 153-8505 Japan
| | - Tsukuru Minamiki
- Institute of Industrial Science The University of Tokyo 4-6-1 Komaba, Meguro-ku Tokyo 153-8505 Japan
| | - Yasuyuki Sakai
- LIMMS/CNRS-IIS (UMI2820) The University of Tokyo 4-6-1 Komaba, Meguro-ku Tokyo 153-8505 Japan
- Department of Chemical System Engineering The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku Tokyo 113-8656 Japan
| | - Teruo Fujii
- Institute of Industrial Science The University of Tokyo 4-6-1 Komaba, Meguro-ku Tokyo 153-8505 Japan
- LIMMS/CNRS-IIS (UMI2820) The University of Tokyo 4-6-1 Komaba, Meguro-ku Tokyo 153-8505 Japan
| | - Tsuyoshi Minami
- Institute of Industrial Science The University of Tokyo 4-6-1 Komaba, Meguro-ku Tokyo 153-8505 Japan
- LIMMS/CNRS-IIS (UMI2820) The University of Tokyo 4-6-1 Komaba, Meguro-ku Tokyo 153-8505 Japan
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35
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Kravchenko S, Snopok B. “Vanishing mass” in the Sauerbrey world: quartz crystal microbalance study of self-assembled monolayers based on a tripod-branched structure with tuneable molecular flexibility. Analyst 2020; 145:656-666. [DOI: 10.1039/c9an01366k] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
Abstract
Complex loadings that appear on a surface with flexible spatial organisation can reveal anti-Sauerbrey behaviour due to their variable interfacial architecture even for an ultrathin monomolecular sensitive layer.
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Affiliation(s)
| | - Boris Snopok
- V. Lashkaryov Institute of Semiconductor Physics
- Kyiv
- Ukraine
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36
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Santos HM, Tsai CY, Maquiling KRA, Tayo LL, Mariatulqabtiah AR, Lee CW, Chuang KP. Diagnosis and potential treatments for acute hepatopancreatic necrosis disease (AHPND): a review. AQUACULTURE INTERNATIONAL : JOURNAL OF THE EUROPEAN AQUACULTURE SOCIETY 2020; 28:169-185. [PMID: 32834683 PMCID: PMC7223513 DOI: 10.1007/s10499-019-00451-w] [Citation(s) in RCA: 30] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/10/2019] [Accepted: 08/04/2019] [Indexed: 05/05/2023]
Abstract
Acute hepatopancreatic necrosis disease (AHPND) or formerly known as early mortality syndrome (EMS) is an emerging disease that has caused significant economic losses to the aquaculture industry. The primary causative agent of AHPND is Vibrio parahaemolyticus, a Gram-negative rod-shaped bacterium that has gained plasmids encoding the fatal binary toxins Pir A/Pir B that cause rapid death of the infected shrimp. In this review, the current research studies and information about AHPND in shrimps have been presented. Molecular diagnostic tools and potential treatments regarding AHPND were also included. This review also includes relevant findings which may serve as guidelines that can help for further investigation and studies on AHPND or other shrimp diseases.
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Affiliation(s)
- Harvey M. Santos
- International Program in Animal Vaccine Technology, International College, National Pingtung University of Science and Technology, Neipu, 912 Pingtung Taiwan
| | - Ching-Yi Tsai
- International Program in Animal Vaccine Technology, International College, National Pingtung University of Science and Technology, Neipu, 912 Pingtung Taiwan
| | - Kenth Roger A. Maquiling
- School of Chemical, Biological and Materials Engineering and Sciences, Mapúa University, 1002 Intramuros, Manila Philippines
| | - Lemmuel L. Tayo
- School of Chemical, Biological and Materials Engineering and Sciences, Mapúa University, 1002 Intramuros, Manila Philippines
| | - Abdul R. Mariatulqabtiah
- Faculty of Biotechnology and Biomolecular Sciences, Universiti Putra Malaysia, 43400 Serdang, Selangor Malaysia
| | - Chi-Wen Lee
- Department of Post-Baccalaureate Veterinary Medicine, Asia University, Taichung, 41354 Taiwan
| | - Kuo Pin Chuang
- International Program in Animal Vaccine Technology, International College, National Pingtung University of Science and Technology, Neipu, 912 Pingtung Taiwan
- Graduate Institute of Animal Vaccine Technology, College of Veterinary Medicine, National Pingtung University of Science and Technology, Neipu, 912 Pingtung Taiwan
- Research Center for Animal Biologics, National Pingtung University of Science and Technology, Neipu, 912 Pingtung Taiwan
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37
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Abstract
Supramolecular polymers are non-covalent assemblies of unimeric building blocks connected by secondary interactions and hold great promises due to their dynamic nature.
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Affiliation(s)
| | | | - Sebastien Perrier
- Department of Chemistry
- University of Warwick
- Coventry CV4 7AL
- UK
- Faculty of Pharmacy and Pharmaceutical Sciences
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38
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Ma D, Zheng SR, Fan J, Cai SL, Dai Z, Zou XY, Teng SH, Zhang WG. A new amplification strategy for a quartz crystal microbalance miRNA sensor based on selective interactions between a metal–organic framework and miRNA. NEW J CHEM 2020. [DOI: 10.1039/c9nj04600c] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
Abstract
UiO-66 is used as an effective amplifier in a QCM miRNA sensor to detect Let-7a.
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Affiliation(s)
- Ding Ma
- School of Chemistry
- South China Normal University
- Guangzhou
- China
| | - Sheng-Run Zheng
- School of Chemistry
- South China Normal University
- Guangzhou
- China
| | - Jun Fan
- School of Chemistry
- South China Normal University
- Guangzhou
- China
| | - Song-Liang Cai
- School of Chemistry
- South China Normal University
- Guangzhou
- China
| | - Zong Dai
- School of Chemistry
- Sun Yat-Sen University
- Guangzhou 510275
- China
| | - Xiao-Yong Zou
- School of Chemistry
- Sun Yat-Sen University
- Guangzhou 510275
- China
| | - Shao-Hua Teng
- School of Computer Science and Technology
- Guangdong University of Technology
- Guangzhou 510006
- China
| | - Wei-Guang Zhang
- School of Chemistry
- South China Normal University
- Guangzhou
- China
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39
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Liu C, Zhao T, He S, Zhao L, Zeng X. A lysosome-targeting viscosity-sensitive fluorescent probe based on a novel functionalised near-infrared xanthene-indolium dye and its application in living cells. J Mater Chem B 2020; 8:8838-8844. [DOI: 10.1039/d0tb01329c] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2022]
Abstract
The viscosity of lysosomes plays a significant role in modulating biological processes and reflects the status and function of this kind of organelle, e.g., locations, morphologies, and components.
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Affiliation(s)
- Chang Liu
- Tianjin Key Laboratory for Photoelectric Materials and Devices
- School of Materials Science & Engineering
- Tianjin University of Technology
- Tianjin 300384
- China
| | - Tong Zhao
- Tianjin Key Laboratory for Photoelectric Materials and Devices
- School of Materials Science & Engineering
- Tianjin University of Technology
- Tianjin 300384
- China
| | - Song He
- Tianjin Key Laboratory for Photoelectric Materials and Devices
- School of Materials Science & Engineering
- Tianjin University of Technology
- Tianjin 300384
- China
| | - Liancheng Zhao
- Tianjin Key Laboratory for Photoelectric Materials and Devices
- School of Materials Science & Engineering
- Tianjin University of Technology
- Tianjin 300384
- China
| | - Xianshun Zeng
- Tianjin Key Laboratory for Photoelectric Materials and Devices
- School of Materials Science & Engineering
- Tianjin University of Technology
- Tianjin 300384
- China
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40
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Han C, Ma H, Wang Y, Liu J, Teng L, Lv H, Zhao Q, Wang X. The deposition and wet etching of Mg-doped ZnO films and their applications for solidly mounted resonators. RSC Adv 2020; 10:9672-9677. [PMID: 35497202 PMCID: PMC9050162 DOI: 10.1039/d0ra00659a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/21/2020] [Accepted: 02/26/2020] [Indexed: 11/21/2022] Open
Abstract
In this report, a solidly mounted resonator (SMR), consisting of an Au electrode, Mg-doped ZnO (MgXZn1−XO) piezoelectric film and Bragg acoustic reflector, was fabricated on a Si substrate by radio frequency (RF) magnetron sputtering. As a key processing step for the SMR, MgXZn1−XO films with high c-axis orientation were fabricated and the crystalline structure, surface morphology and roughness of the films were investigated. The surface morphology, optical transmittance and shape control of MgXZn1−XO films were investigated by the chemical wet-etching method with various etchants. The profiles and line patterns of MgXZn1−XO films etched with FeCl3·6H2O solutions are satisfactory and fully meet the industrial requirements. The Bragg acoustic reflector, made entirely of metal, has small internal stress and good heat conduction. An SMR based on a MgXZn1−XO piezoelectric film shows a resonant frequency of 2.402 GHz, and the keff2, QS and QP of the SMR are 3.07%, 415 and 546, respectively. In this report, a solidly mounted resonator (SMR), consisting of an Au electrode, Mg-doped ZnO (MgXZn1−XO) piezoelectric film and Bragg acoustic reflector, was fabricated on a Si substrate by radio frequency (RF) magnetron sputtering.![]()
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Affiliation(s)
- Chengzhang Han
- Optoelectronic Materials and Technologies Engineering Laboratory, Shandong
- Physics Department
- Qingdao University of Science and Technology
- Qingdao 266042
- China
| | - Haoran Ma
- Optoelectronic Materials and Technologies Engineering Laboratory, Shandong
- Physics Department
- Qingdao University of Science and Technology
- Qingdao 266042
- China
| | - Yanping Wang
- Optoelectronic Materials and Technologies Engineering Laboratory, Shandong
- Physics Department
- Qingdao University of Science and Technology
- Qingdao 266042
- China
| | - Jing Liu
- Optoelectronic Materials and Technologies Engineering Laboratory, Shandong
- Physics Department
- Qingdao University of Science and Technology
- Qingdao 266042
- China
| | - Lihua Teng
- Optoelectronic Materials and Technologies Engineering Laboratory, Shandong
- Physics Department
- Qingdao University of Science and Technology
- Qingdao 266042
- China
| | - Hao Lv
- Optoelectronic Materials and Technologies Engineering Laboratory, Shandong
- Physics Department
- Qingdao University of Science and Technology
- Qingdao 266042
- China
| | - Qiuling Zhao
- Optoelectronic Materials and Technologies Engineering Laboratory, Shandong
- Physics Department
- Qingdao University of Science and Technology
- Qingdao 266042
- China
| | - Xia Wang
- Optoelectronic Materials and Technologies Engineering Laboratory, Shandong
- Physics Department
- Qingdao University of Science and Technology
- Qingdao 266042
- China
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41
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Li HY, Chu YH. Reaction-Based Amine and Alcohol Gases Detection with Triazine Ionic Liquid Materials. Molecules 2019; 25:E104. [PMID: 31892100 PMCID: PMC6982797 DOI: 10.3390/molecules25010104] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/31/2019] [Revised: 12/23/2019] [Accepted: 12/24/2019] [Indexed: 12/03/2022] Open
Abstract
We demonstrated in this work the use of affinity ionic liquids, AIL 1 and AIL 2, for chemoselective detection of amine and alcohol gases on a quartz crystal microbalance (QCM). These detections of gaseous amines and alcohols were achieved by nucleophilic aromatic substitution reactions with the electrophilic 1,3,5-triazine-based AIL 1 thin-coated on quartz chips. Starting with inexpensive reagents, bicyclic imidazolium ionic liquids AIL 1 and AIL 2 were readily synthesized in six and four synthetic steps with high isolated yields: 51% and 63%, respectively. The QCM platform developed in this work is readily applicable and highly sensitive to low molecular weight amine gases: for isobutylamine gas (a bacterial volatile) at 10 Hz decrease in resonance frequency (i.e., ΔF = -10 Hz), the detectability using AIL 1 was 6.3 ppb. Our preliminary investigation on detection of the much less nucleophilic alcohol gas by AIL 1 was also promising. To our knowledge, no example to date of reports based on nucleophilic aromatic substitution reactions demonstrating sensitive gas detection in these triazine ionic liquids on a QCM has been reported.
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Affiliation(s)
| | - Yen-Ho Chu
- Department of Chemistry and Biochemistry, National Chung Cheng University, Chiayi 62102, Taiwan;
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42
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Kubota R, Sasaki Y, Minamiki T, Minami T. Chemical Sensing Platforms Based on Organic Thin-Film Transistors Functionalized with Artificial Receptors. ACS Sens 2019; 4:2571-2587. [PMID: 31475522 DOI: 10.1021/acssensors.9b01114] [Citation(s) in RCA: 45] [Impact Index Per Article: 7.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
Abstract
Organic thin-film transistors (OTFTs) have attracted intense attention as promising electronic devices owing to their various applications such as rollable active-matrix displays, flexible nonvolatile memories, and radiofrequency identification (RFID) tags. To further broaden the scope of the application of OTFTs, we focus on the host-guest chemistry combined with the electronic devices. Extended-gate types of OTFTs functionalized with artificial receptors were fabricated to achieve chemical sensing of targets in complete aqueous media. Organic and inorganic ions (cations and anions), neutral molecules, and proteins, which are regarded as target analytes in the field of host-guest chemistry, were electrically detected by artificial receptors. Molecular recognition phenomena on the extended-gate electrode were evaluated by several analytical methods such as photoemission yield spectroscopy in the air, contact angle goniometry, and X-ray photoelectron spectroscopy. Interestingly, the electrical responses of the OTFTs were highly sensitive to the chemical structures of the guests. Thus, the OTFTs will facilitate the selective sensing of target analytes and the understanding of chemical conversions in biological and environmental systems. Furthermore, such cross-reactive responses observed in our studies will provide some important insights into next-generation sensing systems such as OTFT arrays. We strongly believe that our approach will enable the development of new intriguing sensor platforms in the field of host-guest chemistry, analytical chemistry, and organic electronics.
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Affiliation(s)
- Riku Kubota
- Institute of Industrial Science, The University of Tokyo, 4-6-1 Komaba, Meguro-ku, Tokyo 153−8505, Japan
| | - Yui Sasaki
- Institute of Industrial Science, The University of Tokyo, 4-6-1 Komaba, Meguro-ku, Tokyo 153−8505, Japan
| | - Tsukuru Minamiki
- Institute of Industrial Science, The University of Tokyo, 4-6-1 Komaba, Meguro-ku, Tokyo 153−8505, Japan
| | - Tsuyoshi Minami
- Institute of Industrial Science, The University of Tokyo, 4-6-1 Komaba, Meguro-ku, Tokyo 153−8505, Japan
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43
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Dong Y, Yao C, Wang Z, Luo D, Yang D. Target-Triggered Polymerization of Branched DNA Enables Enzyme-free and Fast Discrimination of Single-Base Changes. iScience 2019; 21:228-240. [PMID: 31675552 PMCID: PMC6838547 DOI: 10.1016/j.isci.2019.10.029] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/28/2019] [Revised: 09/24/2019] [Accepted: 10/14/2019] [Indexed: 01/05/2023] Open
Abstract
Single-base changes lead to important biological and biomedical implications; however, the discrimination of single-base changes from normal DNA always remains a grand challenge. Herein we developed a DNA recognition and amplification system based on artificial branched DNA, namely, target-triggered polymerization (TTP), to realize enzyme-free and fast discrimination of single-base changes. Branched DNA as monomers rapidly polymerized into DNA nanospheres only with the trigger of specific DNA. Our TTP system worked reliably over a wide range of conditions. Remarkably, our TTP system was capable of discriminating base-changing DNA from normal DNA, including distinguishing 1-4 nucleotide changes and positions of single base, which was attributed to the significant amplification of small differences in hybridization thermodynamics and kinetics. We further proposed a theoretical method for calculating the hybridization probability of nucleic acids, which performed highly consistent with experimental results.
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Affiliation(s)
- Yuhang Dong
- Frontier Science Center for Synthetic Biology, Key Laboratory of Systems Bioengineering (MOE), School of Chemical Engineering and Technology, Tianjin University, Tianjin 300350, P. R. China
| | - Chi Yao
- Frontier Science Center for Synthetic Biology, Key Laboratory of Systems Bioengineering (MOE), School of Chemical Engineering and Technology, Tianjin University, Tianjin 300350, P. R. China
| | - Zhi Wang
- Frontier Science Center for Synthetic Biology, Key Laboratory of Systems Bioengineering (MOE), School of Chemical Engineering and Technology, Tianjin University, Tianjin 300350, P. R. China
| | - Dan Luo
- Department of Biological & Environmental Engineering, Cornell University, Ithaca, NY 14853, USA; CAS Key Laboratory of Nano-Bio Interface, Suzhou Institute of Nano-Tech and Nano-Bionics, Chinese Academy of Sciences, Suzhou 215123, P. R. China
| | - Dayong Yang
- Frontier Science Center for Synthetic Biology, Key Laboratory of Systems Bioengineering (MOE), School of Chemical Engineering and Technology, Tianjin University, Tianjin 300350, P. R. China.
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44
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Han C, Wang X, Zhao Q, Teng L, Zhang S, Lv H, Liu J, Ma H, Wang Y. Solidly mounted resonator sensor for biomolecule detections. RSC Adv 2019; 9:21323-21328. [PMID: 35521317 PMCID: PMC9065989 DOI: 10.1039/c9ra01695c] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/06/2019] [Accepted: 06/30/2019] [Indexed: 11/21/2022] Open
Abstract
We report the fabrication of a solidly mounted resonator (SMR) that can also function as a sensor for biological molecules. The SMR, consisting of a Au electrode, aluminum nitride (AlN) piezoelectric thin film and Bragg acoustic reflector, was fabricated on a Si substrate by radio frequency (RF) magnetron sputtering. The Bragg acoustic reflector, made entirely of metal, has small internal stress and good heat conduction. Human immunoglobulin G (IgG) antibody was immobilized on the modified (by self-assembled monolayer method) Au electrode surface of the SMR and goat anti-human IgG antigen was captured through the specificity of bond between the antibody and antigen on the electrode surface. We found a linear relationship between the resonant frequency shift and the concentration of goat anti-human IgG antigen for concentrations smaller than 0.4 mg ml−1 and a relatively constant frequency shift for concentrations greater than 0.5 mg ml−1. A series of interference experiments can prove that the selectivity of the sensor is satisfactory. Our findings suggest that the SMR sensor is an attractive alternative for biomolecule detection. We report the fabrication of a solidly mounted resonator (SMR) that can also function as a sensor for biological molecules.![]()
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Affiliation(s)
- Chengzhang Han
- Optoelectronic Materials and Technologies Engineering Laboratory, Shandong, Physics Department, Qingdao University of Science and Technology Qingdao 266042 China .,College of Mechanical and Electronic Engineering, Qingdao Binhai University Qingdao 266555 China
| | - Xia Wang
- Optoelectronic Materials and Technologies Engineering Laboratory, Shandong, Physics Department, Qingdao University of Science and Technology Qingdao 266042 China
| | - Qiuling Zhao
- Optoelectronic Materials and Technologies Engineering Laboratory, Shandong, Physics Department, Qingdao University of Science and Technology Qingdao 266042 China
| | - Lihua Teng
- Optoelectronic Materials and Technologies Engineering Laboratory, Shandong, Physics Department, Qingdao University of Science and Technology Qingdao 266042 China
| | - Shuaiyi Zhang
- Optoelectronic Materials and Technologies Engineering Laboratory, Shandong, Physics Department, Qingdao University of Science and Technology Qingdao 266042 China
| | - Hao Lv
- Optoelectronic Materials and Technologies Engineering Laboratory, Shandong, Physics Department, Qingdao University of Science and Technology Qingdao 266042 China
| | - Jing Liu
- Optoelectronic Materials and Technologies Engineering Laboratory, Shandong, Physics Department, Qingdao University of Science and Technology Qingdao 266042 China
| | - Haoran Ma
- Optoelectronic Materials and Technologies Engineering Laboratory, Shandong, Physics Department, Qingdao University of Science and Technology Qingdao 266042 China
| | - Yanping Wang
- Optoelectronic Materials and Technologies Engineering Laboratory, Shandong, Physics Department, Qingdao University of Science and Technology Qingdao 266042 China
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45
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Alhamoud Y, Yang D, Fiati Kenston SS, Liu G, Liu L, Zhou H, Ahmed F, Zhao J. Advances in biosensors for the detection of ochratoxin A: Bio-receptors, nanomaterials, and their applications. Biosens Bioelectron 2019; 141:111418. [PMID: 31228729 DOI: 10.1016/j.bios.2019.111418] [Citation(s) in RCA: 91] [Impact Index Per Article: 15.2] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/26/2019] [Revised: 06/04/2019] [Accepted: 06/04/2019] [Indexed: 01/20/2023]
Abstract
Ochratoxin A (OTA) is a class of mycotoxin mainly produced by the genera Aspergillus and Penicillium. OTA can cause various forms of kidney, liver and brain diseases in both humans and animals although trace amount of OTA is normally present in food. Therefore, development of fast and sensitive detection technique is essential for accurate diagnosis of OTA. Currently, the most commonly used detection methods are enzyme-linked immune sorbent assays (ELISA) and chromatographic techniques. These techniques are sensitive but time consuming, and require expensive equipment, highly trained operators, as well as extensive preparation steps. These drawbacks limit their wide application in OTA detection. On the contrary, biosensors hold a great potential for OTA detection at for both research and industry because they are less expensive, rapid, sensitive, specific, simple and portable. This paper aims to provide an extensive overview on biosensors for OTA detection by highlighting the main biosensing recognition elements for OTA, the most commonly used nanomaterials for fabricating the sensing interface, and their applications in different read-out types of biosensors. Current challenges and future perspectives are discussed as well.
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Affiliation(s)
- Yasmin Alhamoud
- Department of Preventative Medicine, Zhejiang Key Laboratory of Pathophysiology, Medical School of Ningbo University, 818 Fenghua Road, Ningbo, Zhejiang Province, 315211, People's Republic of China
| | - Danting Yang
- Department of Preventative Medicine, Zhejiang Key Laboratory of Pathophysiology, Medical School of Ningbo University, 818 Fenghua Road, Ningbo, Zhejiang Province, 315211, People's Republic of China; Graduate School of Biomedical Engineering, ARC Centre of Excellence in Nanoscale BioPhotonics (CNBP), Faculty of Engineering, The University of New South Wales, Sydney, Sydney, 2052, Australia.
| | - Samuel Selorm Fiati Kenston
- Department of Preventative Medicine, Zhejiang Key Laboratory of Pathophysiology, Medical School of Ningbo University, 818 Fenghua Road, Ningbo, Zhejiang Province, 315211, People's Republic of China
| | - Guozhen Liu
- Graduate School of Biomedical Engineering, ARC Centre of Excellence in Nanoscale BioPhotonics (CNBP), Faculty of Engineering, The University of New South Wales, Sydney, Sydney, 2052, Australia
| | - Linyang Liu
- Graduate School of Biomedical Engineering, ARC Centre of Excellence in Nanoscale BioPhotonics (CNBP), Faculty of Engineering, The University of New South Wales, Sydney, Sydney, 2052, Australia
| | - Haibo Zhou
- Institute of Pharmaceutical Analysis and Guangdong Province Key Laboratory of Pharmacodynamic Constituents of Traditional Chinese Medicine & New Drug Research, College of Pharmacy, Jinan University, Guangzhou, 510632, China
| | - Fatma Ahmed
- Department of Preventative Medicine, Zhejiang Key Laboratory of Pathophysiology, Medical School of Ningbo University, 818 Fenghua Road, Ningbo, Zhejiang Province, 315211, People's Republic of China
| | - Jinshun Zhao
- Department of Preventative Medicine, Zhejiang Key Laboratory of Pathophysiology, Medical School of Ningbo University, 818 Fenghua Road, Ningbo, Zhejiang Province, 315211, People's Republic of China.
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46
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Wang Y, Sun J, Qiao J, Ouyang J, Na N. A "Soft" and "Hard" Ionization Method for Comprehensive Studies of Molecules. Anal Chem 2018; 90:14095-14099. [PMID: 30422630 DOI: 10.1021/acs.analchem.8b04437] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/08/2023]
Abstract
Ambient mass spectrometry can be rapidly and directly effective for molecular studies, while there still seems to be a gap between two major groups of electrospray ionization (ESI)- and atmospheric pressure chemical ionization (APCI)-related techniques, for detection of moderately polar to polar and low polar to nonpolar molecules in a relatively low mass range, respectively. Here, an extensively applicable "soft" and "hard" ionization method, spray-dependent plasma mass spectrometry (SDP MS), was established for detecting various molecules with diverse polarities or molecular weights. By SDP MS, both fragment ions and intact molecular ions can be obtained. Significantly, cluster ions of aggregates in high mass range formed by weak molecular interactions can also be well recorded, much softer than traditional ESI MS. By filling the gap between ESI-based and APCI-based ionization techniques, SDP MS would enhance MS performance for comprehensive molecular studies and be extensively applicable in fields of organic synthesis, biological chemistry, medical chemistry, and clinical diagnosis.
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Affiliation(s)
- Yan Wang
- Key Laboratory of Theoretical and Computational Photochemistry, College of Chemistry , Beijing Normal University , Beijing 100875 , China
| | - Jianghui Sun
- Key Laboratory of Theoretical and Computational Photochemistry, College of Chemistry , Beijing Normal University , Beijing 100875 , China
| | - Jinping Qiao
- Key Laboratory of Theoretical and Computational Photochemistry, College of Chemistry , Beijing Normal University , Beijing 100875 , China
| | - Jin Ouyang
- Key Laboratory of Theoretical and Computational Photochemistry, College of Chemistry , Beijing Normal University , Beijing 100875 , China
| | - Na Na
- Key Laboratory of Theoretical and Computational Photochemistry, College of Chemistry , Beijing Normal University , Beijing 100875 , China
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47
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Ling Y, Fu XB, Li NB, Luo HQ. A Label-free Resonance Rayleigh Scattering Sensor for Detection of Thrombin Based on Aptamer Recognizing. ANAL SCI 2018; 34:881-886. [PMID: 30101881 DOI: 10.2116/analsci.17p498] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
Abstract
The interaction between thrombin binding aptamer (TBA) and thrombin (TB) was studied by resonance Rayleigh scattering (RRS). In neutral medium, TBA is present in a balanced form between a G-quadruplex structure and a random coil structure, and the TBA can be induced by metal ions to form a G-quadruplex structure. Upon addition of thrombin, the G-quadruplex selectively bound to TB, which resulted in enhanced resonance Rayleigh scattering. The scattering intensities increased proportionally with the concentration of TB from 10 to 50 nM. The method had very high sensitivity and good selectivity, and the detection limit (3δ/s) was 1 nM. In this work, the spectral characteristics of RRS, the optimum conditions of the reaction, and influencing factors for the RRS intensities were investigated. Furthermore, the structure of the TBA-TB complex and the sensing mechanism were explored. The TB sensor was applied to a diluted human serum sample with satisfactory results, indicating the potential of this method to be applied to biological samples. A selective and simple RRS sensor for the detection of trace amounts of TB is proposed based on conformational change of TBA.
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Affiliation(s)
- Yu Ling
- Key Laboratory of Luminescent and Real-Time Analytical Chemistry (Southwest University), Ministry of Education, School of Chemistry and Chemical Engineering, Southwest University
| | - Xiao Bei Fu
- Key Laboratory of Luminescent and Real-Time Analytical Chemistry (Southwest University), Ministry of Education, School of Chemistry and Chemical Engineering, Southwest University
| | - Nian Bing Li
- Key Laboratory of Luminescent and Real-Time Analytical Chemistry (Southwest University), Ministry of Education, School of Chemistry and Chemical Engineering, Southwest University
| | - Hong Qun Luo
- Key Laboratory of Luminescent and Real-Time Analytical Chemistry (Southwest University), Ministry of Education, School of Chemistry and Chemical Engineering, Southwest University
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48
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Sheikhi A, Olsson ALJ, Tufenkji N, Kakkar A, van de Ven TGM. Overcoming Interfacial Scaling Using Engineered Nanocelluloses: A QCM-D Study. ACS APPLIED MATERIALS & INTERFACES 2018; 10:34553-34560. [PMID: 30203958 DOI: 10.1021/acsami.8b07435] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/08/2023]
Abstract
Nucleation of sparingly soluble species, such as the inorganic salts of calcium, magnesium, and phosphorous, followed by their growth at solid-liquid interfaces has turned into a major concern in water-based industries. Increased resistance against heat, mass, and momentum transfer is the main drawback of the so-called scaling phenomenon. Although phosphorous-, nitrogen-, and sulfur-based antiscaling macromolecules offer adequate antiscaling performance, their potential negative environmental impacts render them less desirable. Despite recent efforts in developing green antiscalants, there has been no promising green solution based on biomass due to its chemical inertness. Here, we use quartz crystal microbalance with dissipation monitoring (QCM-D) to evaluate the real-time performance of an emerging family of nanoengineered anionic hairy cellulose crystals, bearing dicarboxylated amorphous cellulose chains, with a charge density of more than 5.5 mequiv per g, in preventing the nucleation and growth of calcium carbonate, the most common industrial scale. Remarkably, a CaCO3 mass deposition rate ∼0 (complete scale inhibition) is obtained when less than 10 ppm of the hairy nanocellulose is added to an already scaled surface under a harsh supersaturated condition at 50 °C. Motivated by their threshold antiscaling effect, we show that coating planar silica surfaces with hairy nanocelluloses may result in scale-resistant interfaces. This research envisions how engineered hairy nanocelluloses may have practical implications for developing scale-resistant interfaces based on the most abundant biopolymer in the world.
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Affiliation(s)
| | - Adam L J Olsson
- Department of Chemical Engineering , McGill University , 3610 University Street , Montreal , QC H3A 0C5 , Canada
| | - Nathalie Tufenkji
- Department of Chemical Engineering , McGill University , 3610 University Street , Montreal , QC H3A 0C5 , Canada
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49
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Li Z, Askim JR, Suslick KS. The Optoelectronic Nose: Colorimetric and Fluorometric Sensor Arrays. Chem Rev 2018; 119:231-292. [DOI: 10.1021/acs.chemrev.8b00226] [Citation(s) in RCA: 476] [Impact Index Per Article: 68.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
Affiliation(s)
- Zheng Li
- Department of Chemistry, University of Illinois at Urbana−Champaign, Urbana, Illinois 61801, United States
| | - Jon R. Askim
- National Institute of Standards and Technology, Gaithersburg, Maryland 20899, United States
| | - Kenneth S. Suslick
- Department of Chemistry, University of Illinois at Urbana−Champaign, Urbana, Illinois 61801, United States
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50
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Esfahani AM, Zhao W, Chen JY, Huang C, Xi N, Xi J, Yang R. On the Measurement of Energy Dissipation of Adhered Cells with the Quartz Microbalance with Dissipation Monitoring. Anal Chem 2018; 90:10340-10349. [PMID: 30088414 PMCID: PMC6669898 DOI: 10.1021/acs.analchem.8b02153] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/15/2023]
Abstract
We previously reported the finding of a linear correlation between the change of energy dissipation (Δ D) of adhered cells measured with the quartz crystal microbalance with dissipation monitoring (QCM-D) and the level of focal adhesions of the cells. To account for this correlation, we have developed a theoretical framework for assessing the Δ D-response of adhered cells. We rationalized that the mechanical energy of an oscillating QCM-D sensor coupled with a cell monolayer is dissipated through three main processes: the interfacial friction through the dynamic restructuring (formation and rupture) of cell-extracellular matrix (ECM) bonds, the interfacial viscous damping by the liquid trapped between the QCM-D sensor and the basal membrane of the cell layer, and the intracellular viscous damping through the viscous slip between the cytoplasm and stress fibers as well as among stress fibers themselves. Our modeling study shows that the interfacial viscous damping by the trapped liquid is the primary process for energy dissipation during the early stage of the cell adhesion, whereas the dynamic restructuring of cell-ECM bonds becomes more prevalent during the later stage of the cell adhesion. Our modeling study also establishes a positive linear correlation between the Δ D-response and the level of cell adhesion quantified with the number of cell-ECM bonds, which corroborates our previous experimental finding. This correlation with a wide well-defined linear dynamic range provides a much needed theoretical validation of the dissipation monitoring function of the QCM-D as a powerful quantitative analytical tool for cell study.
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Affiliation(s)
- Amir Monemian Esfahani
- Department of Mechanical and Materials Engineering, University of Nebraska-Lincoln, Lincoln, NE 48824, United States
| | - Weiwei Zhao
- Department of Mechanical and Materials Engineering, University of Nebraska-Lincoln, Lincoln, NE 48824, United States
| | - Jennifer Y. Chen
- Department of Chemistry, Drexel University, Philadelphia, Pennsylvania 19104, United States
| | - Changjin Huang
- Department of Biomedical Engineering, Carnegie Mellon University, Pittsburgh, PA 15213, United States
| | - Ning Xi
- Department of Industrial and Manufacturing Systems Engineering, The University of Hong Kong, HK, China
| | - Jun Xi
- Department of Chemistry, Drexel University, Philadelphia, Pennsylvania 19104, United States
| | - Ruiguo Yang
- Department of Mechanical and Materials Engineering, University of Nebraska-Lincoln, Lincoln, NE 48824, United States
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