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Guan X, Schenk HJ, Roth MR, Welti R, Werner J, Kaack L, Trabi CL, Jansen S. Nanoparticles are linked to polar lipids in xylem sap of temperate angiosperm species. TREE PHYSIOLOGY 2022; 42:2003-2019. [PMID: 35552762 DOI: 10.1093/treephys/tpac054] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/08/2021] [Accepted: 05/09/2022] [Indexed: 06/15/2023]
Abstract
In previous research, xylem sap of angiosperms has been found to include low concentrations of nanoparticles and polar lipids. A major goal of this study was to test predictions arising from the hypothesis that the nanoparticles consist largely of polar lipids from the original cell content of vessel elements. These predictions included that polar lipid and nanoparticle concentrations would be correlated, that they both do not pass through pit membranes and that they do not vary seasonally because they originate from living vessel element cells. We collected xylem sap of six temperate angiosperm species over the whole year to consider seasonal variation. Concentrations of nanoparticles and lipids in xylem sap and contamination control samples were measured with a NanoSight device and mass spectrometry. We found that the concentration of nanoparticles and polar lipids was (i) diluted when an increasing amount of sap was extracted, (ii) significantly correlated to each other for three species, (iii) affected by vessel anatomy, (iv) very low and largely different in chemical composition from contamination controls and (v) hardly variable among seasons. Moreover, there was a minor freezing-thawing effect with respect to nanoparticle amount and size. Xylem sap lipids included polar galactolipids and phospholipids in all species and neutral triacylglycerols in two species. These findings support the predictions and, by implication, the underlying hypothesis that nanoparticles in xylem sap consist of polar lipids from the original cell content of living vessel element cells. Further research is needed to examine the formation and stability of nanoparticles concerning lipid composition and multiphase interactions among gas, liquid and solid phases in xylem conduits of living plants.
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Affiliation(s)
- Xinyi Guan
- Institute of Systematic Botany and Ecology, Ulm University, Albert-Einstein-Allee 11, 89081 Ulm, Germany
| | - H Jochen Schenk
- Department of Biological Science, California State University Fullerton, 800 N. State College Boulevard, Fullerton, CA 92831, USA
| | - Mary R Roth
- Kansas Lipidomics Research Center, Division of Biology, Kansas State University, Manhattan, KS 66506, USA
| | - Ruth Welti
- Kansas Lipidomics Research Center, Division of Biology, Kansas State University, Manhattan, KS 66506, USA
| | - Julia Werner
- Institute of Systematic Botany and Ecology, Ulm University, Albert-Einstein-Allee 11, 89081 Ulm, Germany
| | - Lucian Kaack
- Institute of Systematic Botany and Ecology, Ulm University, Albert-Einstein-Allee 11, 89081 Ulm, Germany
| | - Christophe L Trabi
- Institute of Systematic Botany and Ecology, Ulm University, Albert-Einstein-Allee 11, 89081 Ulm, Germany
| | - Steven Jansen
- Institute of Systematic Botany and Ecology, Ulm University, Albert-Einstein-Allee 11, 89081 Ulm, Germany
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Herrera-Ramírez D, Sierra CA, Römermann C, Muhr J, Trumbore S, Silvério D, Brando PM, Hartmann H. Starch and lipid storage strategies in tropical trees relate to growth and mortality. THE NEW PHYTOLOGIST 2021; 230:139-154. [PMID: 33507548 DOI: 10.1111/nph.17239] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/26/2020] [Accepted: 12/11/2020] [Indexed: 06/12/2023]
Abstract
Non-structural carbon (NSC) storage (i.e. starch, soluble sugras and lipids) in tree stems play important roles in metabolism and growth. Their spatial distribution in wood may explain species-specific differences in carbon storage dynamics, growth and survival. However, quantitative information on the spatial distribution of starch and lipids in wood is sparse due to methodological limitations. Here we assessed differences in wood NSC and lipid storage between tropical tree species with different growth and mortality rates and contrasting functional types. We measured starch and soluble sugars in wood cores up to 4 cm deep into the stem using standard chemical quantification methods and histological slices stained with Lugol's iodine. We also detected neutral lipids using histological slices stained with Oil-Red-O. The histological method allowed us to group individuals into two categories according to their starch storage strategy: fiber-storing trees and parenchyma-storing trees. The first group had a bigger starch pool, slower growth and lower mortality rates than the second group. Lipid storage was found in wood parenchyma in five species and was related to low mortality rates. The quantification of the spatial distribution of starch and lipids in wood improves our understanding of NSC dynamics in trees and reveals additional dimensions of tree growth and survival strategies.
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Affiliation(s)
| | - Carlos A Sierra
- Max Planck Institute for Biogeochemistry, Hans-Knöll-Str 10, Jena, 07745, Germany
| | - Christine Römermann
- German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Leipzig, D-04103, Germany
- Department of Bioclimatology, Georg August University Göttingen, Büsgenweg 2, Göttingen, 37077, Germany
| | - Jan Muhr
- Max Planck Institute for Biogeochemistry, Hans-Knöll-Str 10, Jena, 07745, Germany
- Institute of Ecology and Evolution, Friedrich Schiller University Jena, Philosophenweg 16, Jena, 07743, Germany
| | - Susan Trumbore
- Max Planck Institute for Biogeochemistry, Hans-Knöll-Str 10, Jena, 07745, Germany
| | - Divino Silvério
- Department of Biology, Universidade Federal Rural da Amazônia - UFRA, Capitão Poço, Pará, 68650-000, Brazil
| | - Paulo M Brando
- Department of Earth System Science, University of California, Irvine, CA, 92697, USA
- Instituto de Pesquisa Ambiental da Amazônia, Brasília, DF, 70863-520, Brazil
- Woodwell Climate Research Center, Falmouth, MA, 02540, USA
| | - Henrik Hartmann
- Max Planck Institute for Biogeochemistry, Hans-Knöll-Str 10, Jena, 07745, Germany
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Schenk HJ, Michaud JM, Mocko K, Espino S, Melendres T, Roth MR, Welti R, Kaack L, Jansen S. Lipids in xylem sap of woody plants across the angiosperm phylogeny. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2021; 105:1477-1494. [PMID: 33295003 DOI: 10.1111/tpj.15125] [Citation(s) in RCA: 20] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/02/2020] [Accepted: 11/13/2020] [Indexed: 06/12/2023]
Abstract
Lipids have been observed attached to lumen-facing surfaces of mature xylem conduits of several plant species, but there has been little research on their functions or effects on water transport, and only one lipidomic study of the xylem apoplast. Therefore, we conducted lipidomic analyses of xylem sap from woody stems of seven plants representing six major angiosperm clades, including basal magnoliids, monocots and eudicots, to characterize and quantify phospholipids, galactolipids and sulfolipids in sap using mass spectrometry. Locations of lipids in vessels of Laurus nobilis were imaged using transmission electron microscopy and confocal microscopy. Xylem sap contained the galactolipids di- and monogalactosyldiacylglycerol, as well as all common plant phospholipids, but only traces of sulfolipids, with total lipid concentrations in extracted sap ranging from 0.18 to 0.63 nmol ml-1 across all seven species. Contamination of extracted sap from lipids in cut living cells was found to be negligible. Lipid composition of sap was compared with wood in two species and was largely similar, suggesting that sap lipids, including galactolipids, originate from cell content of living vessels. Seasonal changes in lipid composition of sap were observed for one species. Lipid layers coated all lumen-facing vessel surfaces of L. nobilis, and lipids were highly concentrated in inter-vessel pits. The findings suggest that apoplastic, amphiphilic xylem lipids are a universal feature of angiosperms. The findings require a reinterpretation of the cohesion-tension theory of water transport to account for the effects of apoplastic lipids on dynamic surface tension and hydraulic conductance in xylem.
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Affiliation(s)
- H Jochen Schenk
- Department of Biological Science, California State University Fullerton, 800 N. State College Boulevard, Fullerton, CA, 92831, USA
| | - Joseph M Michaud
- Department of Biological Science, California State University Fullerton, 800 N. State College Boulevard, Fullerton, CA, 92831, USA
| | - Kerri Mocko
- Department of Biological Science, California State University Fullerton, 800 N. State College Boulevard, Fullerton, CA, 92831, USA
| | - Susana Espino
- Department of Biological Science, California State University Fullerton, 800 N. State College Boulevard, Fullerton, CA, 92831, USA
| | - Tatiana Melendres
- Department of Biological Science, California State University Fullerton, 800 N. State College Boulevard, Fullerton, CA, 92831, USA
| | - Mary R Roth
- Kansas Lipidomics Research Center, Division of Biology, Kansas State University, Manhattan, KS, 66506, USA
| | - Ruth Welti
- Kansas Lipidomics Research Center, Division of Biology, Kansas State University, Manhattan, KS, 66506, USA
| | - Lucian Kaack
- Institute of Systematic Botany and Ecology, Ulm University, Albert-Einstein-Allee 11, Ulm, D-89081, Germany
| | - Steven Jansen
- Institute of Systematic Botany and Ecology, Ulm University, Albert-Einstein-Allee 11, Ulm, D-89081, Germany
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Miray R, Kazaz S, To A, Baud S. Molecular Control of Oil Metabolism in the Endosperm of Seeds. Int J Mol Sci 2021; 22:1621. [PMID: 33562710 PMCID: PMC7915183 DOI: 10.3390/ijms22041621] [Citation(s) in RCA: 20] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/22/2020] [Revised: 01/30/2021] [Accepted: 02/02/2021] [Indexed: 12/12/2022] Open
Abstract
In angiosperm seeds, the endosperm develops to varying degrees and accumulates different types of storage compounds remobilized by the seedling during early post-germinative growth. Whereas the molecular mechanisms controlling the metabolism of starch and seed-storage proteins in the endosperm of cereal grains are relatively well characterized, the regulation of oil metabolism in the endosperm of developing and germinating oilseeds has received particular attention only more recently, thanks to the emergence and continuous improvement of analytical techniques allowing the evaluation, within a spatial context, of gene activity on one side, and lipid metabolism on the other side. These studies represent a fundamental step toward the elucidation of the molecular mechanisms governing oil metabolism in this particular tissue. In particular, they highlight the importance of endosperm-specific transcriptional controls for determining original oil compositions usually observed in this tissue. In the light of this research, the biological functions of oils stored in the endosperm of seeds then appear to be more diverse than simply constituting a source of carbon made available for the germinating seedling.
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Affiliation(s)
| | | | | | - Sébastien Baud
- Institut Jean-Pierre Bourgin, INRAE, CNRS, AgroParisTech, Université Paris-Saclay, 78000 Versailles, France; (R.M.); (S.K.); (A.T.)
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Marks RA, Smith JJ, VanBuren R, McLetchie DN. Expression dynamics of dehydration tolerance in the tropical plant Marchantia inflexa. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2021; 105:209-222. [PMID: 33119914 DOI: 10.1111/tpj.15052] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/06/2019] [Revised: 09/10/2020] [Accepted: 09/24/2020] [Indexed: 06/11/2023]
Abstract
Tolerance to prolonged water deficit occurs along a continuum in plants, with dehydration tolerance (DhT) and desiccation tolerance (DT) representing some of the most extreme adaptations to water scarcity. Although DhT and DT presumably vary among individuals of a single species, this variability remains largely unstudied. Here, we characterized expression dynamics throughout a dehydration-rehydration time-course in six diverse genotypes of the dioecious liverwort Marchantia inflexa. We identified classical signatures of stress response in M. inflexa, including major changes in transcripts related to metabolism, expression of LEA and ELIP genes, and evidence of cell wall remodeling. However, we detected very little temporal synchronization of these responses across different genotypes of M. inflexa, which may be related to genotypic variation among samples, constitutive expression of dehydration-associated transcripts, the sequestration of mRNAs in ribonucleoprotein partials prior to drying, or the lower tolerance of M. inflexa relative to most bryophytes studied to date. Our characterization of intraspecific variation in expression dynamics suggests that differences in the timing of transcriptional adjustments contribute to variation among genotypes, and that developmental differences impact the relative tolerance of meristematic and differentiated tissues. This work highlights the complexity and variability of water stress tolerance, and underscores the need for comparative studies that seek to characterize variation in DT and DhT.
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Affiliation(s)
- Rose A Marks
- Department of Biology, University of Kentucky, Lexington, KY, 40506, USA
- Department of Horticulture, Michigan State University, East Lansing, MI, 48824, USA
- Plant Resilience Institute, Michigan State University, East Lansing, MI, 48824, USA
| | - Jeramiah J Smith
- Department of Biology, University of Kentucky, Lexington, KY, 40506, USA
| | - Robert VanBuren
- Department of Horticulture, Michigan State University, East Lansing, MI, 48824, USA
- Plant Resilience Institute, Michigan State University, East Lansing, MI, 48824, USA
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Felhofer M, Prats-Mateu B, Bock P, Gierlinger N. Antifungal stilbene impregnation: transport and distribution on the micron-level. TREE PHYSIOLOGY 2018; 38:1526-1537. [PMID: 29992254 PMCID: PMC6198867 DOI: 10.1093/treephys/tpy073] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/05/2018] [Revised: 05/17/2018] [Accepted: 06/03/2018] [Indexed: 05/04/2023]
Abstract
The transition from the living water-transporting sapwood to heartwood involves in many tree species impregnation with extractives. These differ in amount and composition, and enhance resistance against bacteria, insects or fungi. To understand the synthesis, transport and impregnation processes new insights into the biochemical processes are needed by in-situ methods. Here we show the extractive distribution in pine (Pinus sylvestris) microsections with a high lateral resolution sampled in a non-destructive manner using Confocal Raman Microscopy. Integrating marker bands of stilbenes and lipids enables to clearly track the rapid change from sapwood to heartwood within one tree ring. The higher impregnation of the cell corner, compound middle lamella, the S3 layer and pits reveals the optimization of decay resistance on the micron-level. Furthermore, deposits with changing chemical composition are elucidated in the rays and lumen of the tracheids. The spectral signature of these deposits shows the co-location of lipids and pinosylvins with changing ratios from the living to the dead tissue. The results demonstrate that the extractive impregnation on the micro- and nano-level is optimized by a symbiotic relationship of lipids and pinosylvins to enhance the tree's resistance and lifetime.
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Affiliation(s)
- Martin Felhofer
- Institute for Biophysics, Department of Nanobiotechnology, University of Natural Resources and Life Sciences, Muthgasse, Vienna, Austria
| | - Batirtze Prats-Mateu
- Institute for Biophysics, Department of Nanobiotechnology, University of Natural Resources and Life Sciences, Muthgasse, Vienna, Austria
| | - Peter Bock
- Institute for Biophysics, Department of Nanobiotechnology, University of Natural Resources and Life Sciences, Muthgasse, Vienna, Austria
| | - Notburga Gierlinger
- Institute for Biophysics, Department of Nanobiotechnology, University of Natural Resources and Life Sciences, Muthgasse, Vienna, Austria
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7
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Schenk HJ, Espino S, Rich-Cavazos SM, Jansen S. From the sap's perspective: The nature of vessel surfaces in angiosperm xylem. AMERICAN JOURNAL OF BOTANY 2018; 105:172-185. [PMID: 29578294 DOI: 10.1002/ajb2.1034] [Citation(s) in RCA: 29] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/29/2017] [Accepted: 12/14/2017] [Indexed: 06/08/2023]
Abstract
PREMISE OF THE STUDY Xylem sap in angiosperms moves under negative pressure in conduits and cell wall pores that are nanometers to micrometers in diameter, so sap is always very close to surfaces. Surfaces matter for water transport because hydrophobic ones favor nucleation of bubbles, and surface chemistry can have strong effects on flow. Vessel walls contain cellulose, hemicellulose, lignin, pectins, proteins, and possibly lipids, but what is the nature of the inner, lumen-facing surface that is in contact with sap? METHODS Vessel lumen surfaces of five angiosperms from different lineages were examined via transmission electron microscopy and confocal and fluorescence microscopy, using fluorophores and autofluorescence to detect cell wall components. Elemental composition was studied by energy-dispersive X-ray spectroscopy, and treatments with phospholipase C (PLC) were used to test for phospholipids. KEY RESULTS Vessel surfaces consisted mainly of lignin, with strong cellulose signals confined to pit membranes. Proteins were found mainly in inter-vessel pits and pectins only on outer rims of pit membranes and in vessel-parenchyma pits. Continuous layers of lipids were detected on most vessel surfaces and on most pit membranes and were shown by PLC treatment to consist at least partly of phospholipids. CONCLUSIONS Vessel surfaces appear to be wettable because lignin is not strongly hydrophobic and a coating with amphiphilic lipids would render any surface hydrophilic. New questions arise about these lipids and their possible origins from living xylem cells, especially about their effects on surface tension, surface bubble nucleation, and pit membrane function.
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Affiliation(s)
- H Jochen Schenk
- Department of Biological Science, California State University Fullerton, Fullerton, CA 92831, USA
| | - Susana Espino
- Department of Biological Science, California State University Fullerton, Fullerton, CA 92831, USA
| | - Sarah M Rich-Cavazos
- Department of Biological Science, California State University Fullerton, Fullerton, CA 92831, USA
| | - Steven Jansen
- Institute of Systematic Botany and Ecology, Ulm University, Albert-Einstein-Allee 11, D-89081, Ulm, Germany
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Munz E, Rolletschek H, Oeltze-Jafra S, Fuchs J, Guendel A, Neuberger T, Ortleb S, Jakob PM, Borisjuk L. A functional imaging study of germinating oilseed rape seed. THE NEW PHYTOLOGIST 2017; 216:1181-1190. [PMID: 28800167 DOI: 10.1111/nph.14736] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/24/2017] [Accepted: 07/04/2017] [Indexed: 05/24/2023]
Abstract
Germination, the process whereby a dry, quiescent seed springs to life, has been a focus of plant biologist for many years, yet the early events following water uptake, during which metabolism of the embryo is restarted, remain enigmatic. Here, the nature of the cues required for this restarting in oilseed rape (Brassica napus) seed has been investigated. A holistic in vivo approach was designed to display the link between the entry and allocation of water, metabolic events and structural changes occurring during germination. For this, we combined functional magnetic resonance imaging with Fourier transform infrared microscopy, fluorescence-based respiration mapping, computer-aided seed modeling and biochemical tools. We uncovered an endospermal lipid gap, which channels water to the radicle tip, from whence it is distributed via embryonic vasculature toward cotyledon tissues. The resumption of respiration is initiated first in the endosperm, only later spreading to the embryo. Sugar metabolism and lipid utilization are linked to the spatiotemporal sequence of tissue rehydration. Together, this imaging study provides insights into the spatial aspects of key events in oilseed rape seeds leading to germination. It demonstrates how seed architecture predetermines the pattern of water intake, which sets the stage for the orchestrated restart of life.
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Affiliation(s)
- Eberhard Munz
- Leibniz-Institute of Plant Genetics and Crop Plant Research (IPK), Corrensstrasse 3, 06466, Gatersleben, Germany
- Institute of Experimental Physics 5, University of Würzburg, Am Hubland, 97074, Würzburg, Germany
| | - Hardy Rolletschek
- Leibniz-Institute of Plant Genetics and Crop Plant Research (IPK), Corrensstrasse 3, 06466, Gatersleben, Germany
| | - Steffen Oeltze-Jafra
- Innovation Center Computer Assisted Surgery, University of Leipzig, Semmelweisstraße 14, 04103, Leipzig, Germany
| | - Johannes Fuchs
- Leibniz-Institute of Plant Genetics and Crop Plant Research (IPK), Corrensstrasse 3, 06466, Gatersleben, Germany
| | - André Guendel
- Leibniz-Institute of Plant Genetics and Crop Plant Research (IPK), Corrensstrasse 3, 06466, Gatersleben, Germany
| | - Thomas Neuberger
- Huck Institutes of the Life Sciences, 113 Chandlee Lab, University Park, PA, 16802, USA
| | - Stefan Ortleb
- Leibniz-Institute of Plant Genetics and Crop Plant Research (IPK), Corrensstrasse 3, 06466, Gatersleben, Germany
| | - Peter M Jakob
- Institute of Experimental Physics 5, University of Würzburg, Am Hubland, 97074, Würzburg, Germany
| | - Ljudmilla Borisjuk
- Leibniz-Institute of Plant Genetics and Crop Plant Research (IPK), Corrensstrasse 3, 06466, Gatersleben, Germany
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Wang Y, Liu K, Bi D, Zhou S, Shao J. Characterization of the transcriptome and EST-SSR development in Boea clarkeana, a desiccation-tolerant plant endemic to China. PeerJ 2017; 5:e3422. [PMID: 28630801 PMCID: PMC5474092 DOI: 10.7717/peerj.3422] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/17/2017] [Accepted: 05/16/2017] [Indexed: 11/26/2022] Open
Abstract
BACKGROUND Desiccation-tolerant (DT) plants can recover full metabolic competence upon rehydration after losing most of their cellular water (>95%) for extended periods of time. Functional genomic approaches such as transcriptome sequencing can help us understand how DT plants survive and respond to dehydration, which has great significance for plant biology and improving the drought tolerance of crops. Boea clarkeana Hemsl. (Gesneriaceae) is a DT dicotyledonous herb. Its genomic sequences characteristics remain unknown. Based on transcriptomic analyses, polymorphic EST-SSR (simple sequence repeats in expressed sequence tags) molecular primers can be designed, which will greatly facilitate further investigations of the population genetics and demographic histories of DT plants. METHODS In the present study, we used the platform Illumina HiSeq™2000 and de novo assembly technology to obtain leaf transcriptomes of B. clarkeana and conducted a BLASTX alignment of the sequencing data and protein databases for sequence classification and annotation. Then, based on the sequence information, the EST-SSR markers were developed, and the functional annotation of ESTs containing polymorphic SSRs were obtained through BLASTX. RESULTS A total of 91,449 unigenes were generated from the leaf cDNA library of B. clarkeana. Based on a sequence similarity search with a known protein database, 72,087 unigenes were annotated. Among the annotated unigenes, a total of 71,170 unigenes showed significant similarity to the known proteins of 463 popular model species in the Nr database, and 59,962 unigenes and 32,336 unigenes were assigned to Gene Ontology (GO) classifications and Cluster of Orthologous Groups (COG), respectively. In addition, 44,924 unigenes were mapped in 128 KEGG pathways. Furthermore, a total of 7,610 unigenes with 8,563 microsatellites were found. Seventy-four primer pairs were selected from 436 primer pairs designed for polymorphism validation. SSRs with higher polymorphism rates were concentrated on dinucleotides, pentanucleotides and hexanucleotides. Finally, 17 pairs with stable, highly polymorphic loci were selected for polymorphism screening. There was a total of 65 alleles, with 2-6 alleles at each locus. Primarily due to the unique biological characteristics of plants, the HE (0-0.196), HO (0.082-0.14) and PIC (0-0.155) per locus were very low. The functional annotation distribution centered on ESTs containing di- and tri-nucleotide SSRs, and the ESTs containing primers BC2, BC4 and BC12 were annotated to vegetative dehydration/desiccation pathways. DISCUSSION This work is the first genetic study of B. clarkeana as a new plant resource of DT genes. A substantial number of transcriptome sequences were generated in this study. These sequences are valuable resources for gene annotation and discovery as well as molecular marker development. These sequences could also provide a valuable basis for future molecular studies of B. clarkeana.
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Affiliation(s)
- Ying Wang
- College of Life Sciences, Anhui Normal University, Wuhu, Anhui, China
- Anhui Provincial Key Laboratory of the Conservation and Exploitation of Biological Resources, Anhui Normal University, Wuhu, Anhui, China
| | - Kun Liu
- College of Life Sciences, Anhui Normal University, Wuhu, Anhui, China
- Anhui Provincial Key Laboratory of the Conservation and Exploitation of Biological Resources, Anhui Normal University, Wuhu, Anhui, China
| | - De Bi
- College of Life Sciences, Anhui Normal University, Wuhu, Anhui, China
| | - Shoubiao Zhou
- College of Life Sciences, Anhui Normal University, Wuhu, Anhui, China
- College of Environmental Science and Engineering, Anhui Normal University, Wuhu, Anhui, China
| | - Jianwen Shao
- College of Life Sciences, Anhui Normal University, Wuhu, Anhui, China
- Anhui Provincial Key Laboratory of the Conservation and Exploitation of Biological Resources, Anhui Normal University, Wuhu, Anhui, China
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10
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The potential of nuclear magnetic resonance to track lipids in planta. Biochimie 2016; 130:97-108. [DOI: 10.1016/j.biochi.2016.07.014] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/09/2016] [Accepted: 07/22/2016] [Indexed: 12/15/2022]
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Ma C, Wang H, Macnish AJ, Estrada-Melo AC, Lin J, Chang Y, Reid MS, Jiang CZ. Transcriptomic analysis reveals numerous diverse protein kinases and transcription factors involved in desiccation tolerance in the resurrection plant Myrothamnus flabellifolia. HORTICULTURE RESEARCH 2015; 2:15034. [PMID: 26504577 PMCID: PMC4595987 DOI: 10.1038/hortres.2015.34] [Citation(s) in RCA: 38] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/05/2015] [Revised: 06/08/2015] [Accepted: 06/09/2015] [Indexed: 05/18/2023]
Abstract
The woody resurrection plant Myrothamnus flabellifolia has remarkable tolerance to desiccation. Pyro-sequencing technology permitted us to analyze the transcriptome of M. flabellifolia during both dehydration and rehydration. We identified a total of 8287 and 8542 differentially transcribed genes during dehydration and rehydration treatments respectively. Approximately 295 transcription factors (TFs) and 484 protein kinases (PKs) were up- or down-regulated in response to desiccation stress. Among these, the transcript levels of 53 TFs and 91 PKs increased rapidly and peaked early during dehydration. These regulators transduce signal cascades of molecular pathways, including the up-regulation of ABA-dependent and independent drought stress pathways and the activation of protective mechanisms for coping with oxidative damage. Antioxidant systems are up-regulated, and the photosynthetic system is modified to reduce ROS generation. Secondary metabolism may participate in the desiccation tolerance of M. flabellifolia as indicated by increases in transcript abundance of genes involved in isopentenyl diphosphate biosynthesis. Up-regulation of genes encoding late embryogenesis abundant proteins and sucrose phosphate synthase is also associated with increased tolerance to desiccation. During rehydration, the transcriptome is also enriched in transcripts of genes encoding TFs and PKs, as well as genes involved in photosynthesis, and protein synthesis. The data reported here contribute comprehensive insights into the molecular mechanisms of desiccation tolerance in M. flabellifolia.
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Affiliation(s)
- Chao Ma
- Department of Plant Sciences, University of California, Davis, Davis, CA 95616, USA
| | - Hong Wang
- Institute of Horticulture, Jiangsu Academy of Agricultural Sciences/Jiangsu Key Laboratory for Horticultural Crop Genetic Improvement, Nanjing 210014, China
| | - Andrew J Macnish
- Department of Plant Sciences, University of California, Davis, Davis, CA 95616, USA
| | | | - Jing Lin
- Institute of Horticulture, Jiangsu Academy of Agricultural Sciences/Jiangsu Key Laboratory for Horticultural Crop Genetic Improvement, Nanjing 210014, China
| | - Youhong Chang
- Institute of Horticulture, Jiangsu Academy of Agricultural Sciences/Jiangsu Key Laboratory for Horticultural Crop Genetic Improvement, Nanjing 210014, China
| | - Michael S Reid
- Department of Plant Sciences, University of California, Davis, Davis, CA 95616, USA
| | - Cai-Zhong Jiang
- Crops Pathology and Genetic Research Unit, United States Department of Agriculture, Agricultural Research Service, Davis, CA 95616, USA
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Liu Z, Qian J, Liu B, Wang Q, Ni X, Dong Y, Zhong K, Wu Y. Effects of the magnetic resonance imaging contrast agent Gd-DTPA on plant growth and root imaging in rice. PLoS One 2014; 9:e100246. [PMID: 24945975 PMCID: PMC4063760 DOI: 10.1371/journal.pone.0100246] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/19/2014] [Accepted: 05/22/2014] [Indexed: 02/03/2023] Open
Abstract
Although paramagnetic contrast agents have a wide range of applications in medical studies involving magnetic resonance imaging (MRI), these agents are seldom used to enhance MRI images of plant root systems. To extend the application of MRI contrast agents to plant research and to develop related techniques to study root systems, we examined the applicability of the MRI contrast agent Gd-DTPA to the imaging of rice roots. Specifically, we examined the biological effects of various concentrations of Gd-DTPA on rice growth and MRI images. Analysis of electrical conductivity and plant height demonstrated that 5 mmol Gd-DTPA had little impact on rice in the short-term. The results of signal intensity and spin-lattice relaxation time (T1) analysis suggested that 5 mmol Gd-DTPA was the appropriate concentration for enhancing MRI signals. In addition, examination of the long-term effects of Gd-DTPA on plant height showed that levels of this compound up to 5 mmol had little impact on rice growth and (to some extent) increased the biomass of rice.
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Affiliation(s)
- Zan Liu
- Key laboratory of ion beam bioengineering, Institute of Technical Biology and Agriculture Engineering, Hefei Institutes of Physical Science, Chinese Academy of Sciences, Hefei, P. R. China
| | - Junchao Qian
- High Magnetic Field Laboratory, Hefei Institutes of Physical Science, Chinese Academy of Sciences, Hefei, P. R. China
| | - Binmei Liu
- Key laboratory of ion beam bioengineering, Institute of Technical Biology and Agriculture Engineering, Hefei Institutes of Physical Science, Chinese Academy of Sciences, Hefei, P. R. China
| | - Qi Wang
- Key laboratory of ion beam bioengineering, Institute of Technical Biology and Agriculture Engineering, Hefei Institutes of Physical Science, Chinese Academy of Sciences, Hefei, P. R. China
| | - Xiaoyu Ni
- Key laboratory of ion beam bioengineering, Institute of Technical Biology and Agriculture Engineering, Hefei Institutes of Physical Science, Chinese Academy of Sciences, Hefei, P. R. China
| | - Yaling Dong
- Key laboratory of ion beam bioengineering, Institute of Technical Biology and Agriculture Engineering, Hefei Institutes of Physical Science, Chinese Academy of Sciences, Hefei, P. R. China
| | - Kai Zhong
- High Magnetic Field Laboratory, Hefei Institutes of Physical Science, Chinese Academy of Sciences, Hefei, P. R. China
| | - Yuejin Wu
- Key laboratory of ion beam bioengineering, Institute of Technical Biology and Agriculture Engineering, Hefei Institutes of Physical Science, Chinese Academy of Sciences, Hefei, P. R. China
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Borisjuk L, Rolletschek H, Neuberger T. Nuclear magnetic resonance imaging of lipid in living plants. Prog Lipid Res 2013; 52:465-87. [DOI: 10.1016/j.plipres.2013.05.003] [Citation(s) in RCA: 31] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/10/2013] [Revised: 05/15/2013] [Accepted: 05/28/2013] [Indexed: 01/13/2023]
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Borisjuk L, Rolletschek H, Neuberger T. Surveying the plant's world by magnetic resonance imaging. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2012; 70:129-46. [PMID: 22449048 DOI: 10.1111/j.1365-313x.2012.04927.x] [Citation(s) in RCA: 104] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/21/2023]
Abstract
Understanding the way in which plants develop, grow and interact with their environment requires tools capable of a high degree of both spatial and temporal resolution. Magnetic resonance imaging (MRI), a technique which is able to visualize internal structures and metabolites, has the great virtue that it is non-invasive and therefore has the potential to monitor physiological processes occurring in vivo. The major aim of this review is to attract plant biologists to MRI by explaining its advantages and wide range of possible applications for solving outstanding issues in plant science. We discuss the challenges and opportunities of MRI in the study of plant physiology and development, plant-environment interactions, biodiversity, gene functions and metabolism. Overall, it is our view that the potential benefit of harnessing MRI for plant research purposes is hard to overrate.
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Affiliation(s)
- Ljudmilla Borisjuk
- Leibniz-Institute of Plant Genetics and Crop Plant Research (IPK), Corrensstraße 3, Gatersleben, Germany.
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15
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Iijima M, Yoshida T, Kato T, Kawasaki M, Watanabe T, Somasundaram S. Visualization of lateral water transport pathways in soybean by a time of flight-secondary ion mass spectrometry cryo-system. JOURNAL OF EXPERIMENTAL BOTANY 2011; 62:2179-88. [PMID: 21209027 PMCID: PMC3060697 DOI: 10.1093/jxb/erq418] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/14/2010] [Revised: 11/16/2010] [Accepted: 11/25/2010] [Indexed: 05/18/2023]
Abstract
Water movement between cells in a plant body is the basic phenomenon of plant solute transport; however, it has not been well documented due to limitations in observational techniques. This paper reports a visualization technique to observe water movement among plant cells in different tissues using a time of flight-secondary ion mass spectrometry (Tof-SIMS) cryo-system. The specific purpose of this study is to examine the route of water supply from xylem to stem tissues. The maximum resolution of Tof-SIMS imaging was 1.8 μm (defined as the three pixel step length), which allowed detection of water movement at the cellular level. Deuterium-labelled water was found in xylem vessels in the stem 2.5 min after the uptake of labelled water by soybean plants. The water moved from the xylem to the phloem, cambium, and cortex tissues within 30-60 min after water absorption. Deuterium ion counts in the phloem complex were slightly higher than those in the cortex and cambium tissue seen in enlarged images of stem cell tissue during high transpiration. However, deuterium ion counts in the phloem were lower than those in the cambium at night with no evaporative demand. These results indicate that the stem tissues do not receive water directly from the xylem, but rather from the phloem, during high evaporative demand. In contrast, xylem water would be directly supplied to the growing sink during the night without evaporative demand.
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Affiliation(s)
- Morio Iijima
- School of Agriculture, Kinki University, Nara 631-8505, Japan.
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16
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Terskikh V, Müller K, Kermode AR, Leubner-Metzger G. In vivo ¹H-NMR microimaging during seed imbibition, germination, and early growth. Methods Mol Biol 2011; 773:319-327. [PMID: 21898263 DOI: 10.1007/978-1-61779-231-1_18] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/31/2023]
Abstract
Magnetic resonance imaging (MRI) is a superior noninvasive diagnostic tool widely used in clinical medicine, with more than 60 million MRI tests performed each year worldwide. More specialized high-resolution MRI systems capable of a resolution that is 100-1,000 times higher than standard MRI instruments are used primarily in materials science, but are used with increasing frequency in plant physiology. We have shown that high-resolution (1)H-nuclear magnetic resonance (NMR) microimaging can provide a wealth of information about the internal anatomy of plant seeds as small as 1 mm or even smaller. This chapter covers the methods associated with these imaging techniques in detail. We also discuss the application of (1)H-NMR microimaging to study in vivo seed imbibition, germination, and early seedling growth.
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Affiliation(s)
- Victor Terskikh
- Steacie Institute for Molecular Sciences, National Research Council Canada, Ottawa, ON, Canada
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17
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Combined application of 13C NMR spectroscopy and confocal laser scanning microscopy—Investigation on biofilm structure and physico-chemical properties. Chem Eng Sci 2010. [DOI: 10.1016/j.ces.2010.05.013] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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18
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Mietchen D, Manz B, Volke F, Storey K. In vivo assessment of cold adaptation in insect larvae by magnetic resonance imaging and magnetic resonance spectroscopy. PLoS One 2008; 3:e3826. [PMID: 19057644 PMCID: PMC2586655 DOI: 10.1371/journal.pone.0003826] [Citation(s) in RCA: 15] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/28/2008] [Accepted: 11/04/2008] [Indexed: 12/04/2022] Open
Abstract
BACKGROUND Temperatures below the freezing point of water and the ensuing ice crystal formation pose serious challenges to cell structure and function. Consequently, species living in seasonally cold environments have evolved a multitude of strategies to reorganize their cellular architecture and metabolism, and the underlying mechanisms are crucial to our understanding of life. In multicellular organisms, and poikilotherm animals in particular, our knowledge about these processes is almost exclusively due to invasive studies, thereby limiting the range of conclusions that can be drawn about intact living systems. METHODOLOGY Given that non-destructive techniques like (1)H Magnetic Resonance (MR) imaging and spectroscopy have proven useful for in vivo investigations of a wide range of biological systems, we aimed at evaluating their potential to observe cold adaptations in living insect larvae. Specifically, we chose two cold-hardy insect species that frequently serve as cryobiological model systems--the freeze-avoiding gall moth Epiblema scudderiana and the freeze-tolerant gall fly Eurosta solidaginis. RESULTS In vivo MR images were acquired from autumn-collected larvae at temperatures between 0 degrees C and about -70 degrees C and at spatial resolutions down to 27 microm. These images revealed three-dimensional (3D) larval anatomy at a level of detail currently not in reach of other in vivo techniques. Furthermore, they allowed visualization of the 3D distribution of the remaining liquid water and of the endogenous cryoprotectants at subzero temperatures, and temperature-weighted images of these distributions could be derived. Finally, individual fat body cells and their nuclei could be identified in intact frozen Eurosta larvae. CONCLUSIONS These findings suggest that high resolution MR techniques provide for interesting methodological options in comparative cryobiological investigations, especially in vivo.
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Affiliation(s)
- Daniel Mietchen
- Magnetic Resonance Group, Fraunhofer Institute for Biomedical Engineering, IBMT, St Ingbert, Germany.
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19
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Westhoff M, Schneider H, Zimmermann D, Mimietz S, Stinzing A, Wegner LH, Kaiser W, Krohne G, Shirley S, Jakob P, Bamberg E, Bentrup FW, Zimmermann U. The mechanisms of refilling of xylem conduits and bleeding of tall birch during spring. PLANT BIOLOGY (STUTTGART, GERMANY) 2008; 10:604-623. [PMID: 18761499 DOI: 10.1111/j.1438-8677.2008.00062.x] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/26/2023]
Abstract
Seasonal variations in osmolality and components of xylem sap in tall birch trees were determined using several techniques. Xylem sap was extracted from branch and trunk sections of 58 trees using the very rapid gas bubble-based jet-discharge method. The 5-cm long wood pieces were taken at short intervals over the entire tree height. The data show that large biphasic osmolality gradients temporarily exist within the conducting xylem conduits during leaf emergence (up to 272 mosmol x kg(-1) at the apex). These gradients (arising mainly from glucose and fructose) were clearly held within the xylem conduit as demonstrated by (1)H NMR imaging of intact twigs. Refilling experiments with benzene, sucrose infusion, electron and light microscopy, as well as (1)H NMR chemical shift microimaging provided evidence that the xylem of birch represents a compartment confined by solute-reflecting barriers (radial: lipid linings/lipid bodies; axial: presumably air-filled spaces). These features allow transformation of osmolality gradients into osmotic pressure gradients. Refilling of the xylem occurs by a dual mechanism: from the base (by root pressure) and from the top (by hydrostatic pressure generated by xylem-bound osmotic pressure). The generation of osmotic pressure gradients was accompanied by bleeding. Bleeding could be observed at a height of up to 21 m. Bleeding rates measured at a given height decreased exponentially with time. Evidence is presented that the driving force for bleeding is the weight of the static water columns above the bleeding point. The pressure exerted by the water columns and the bleeding volume depend on the water-filling status of (communicating) vessels.
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Affiliation(s)
- M Westhoff
- Lehrstuhl für Biotechnologie, Biozentrum, Universität Würzburg, Würzburg, Germany
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20
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Zimmermann D, Westhoff M, Zimmermann G, Gessner P, Gessner A, Wegner LH, Rokitta M, Ache P, Schneider H, Vásquez JA, Kruck W, Shirley S, Jakob P, Hedrich R, Bentrup FW, Bamberg E, Zimmermann U. Foliar water supply of tall trees: evidence for mucilage-facilitated moisture uptake from the atmosphere and the impact on pressure bomb measurements. PROTOPLASMA 2008; 232:11-34. [PMID: 18176835 DOI: 10.1007/s00709-007-0279-2] [Citation(s) in RCA: 28] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/29/2007] [Accepted: 06/05/2007] [Indexed: 05/25/2023]
Abstract
The water supply to leaves of 25 to 60 m tall trees (including high-salinity-tolerant ones) was studied. The filling status of the xylem vessels was determined by xylem sap extraction (using jet-discharge, gravity-discharge, and centrifugation) and by (1)H nuclear magnetic resonance imaging of wood pieces. Simultaneously, pressure bomb experiments were performed along the entire trunk of the trees up to a height of 57 m. Clear-cut evidence was found that the balancing pressure (P(b)) values of leafy twigs were dictated by the ambient relative humidity rather than by height. Refilling of xylem vessels of apical leaves (branches) obviously mainly occurred via moisture uptake from the atmosphere. These findings could be traced back to the hydration and rehydration of mucilage layers on the leaf surfaces and/or of epistomatal mucilage plugs. Xylem vessels also contained mucilage. Mucilage formation was apparently enforced by water stress. The observed mucilage-based foliar water uptake and humidity dependency of the P(b) values are at variance with the cohesion-tension theory and with the hypothesis that P(b) measurements yield information about the relationships between xylem pressure gradients and height.
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Affiliation(s)
- D Zimmermann
- Abteilung für Biophysikalische Chemie, Max-Planck-Institut für Biophysik, Frankfurt am Main, Federal Republic of Germany.
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21
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Moore JP, Lindsey GG, Farrant JM, Brandt WF. An overview of the biology of the desiccation-tolerant resurrection plant Myrothamnus flabellifolia. ANNALS OF BOTANY 2007; 99:211-7. [PMID: 17218343 PMCID: PMC2803006 DOI: 10.1093/aob/mcl269] [Citation(s) in RCA: 29] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/21/2006] [Accepted: 11/11/2006] [Indexed: 05/13/2023]
Abstract
BACKGROUND Myrothamnus flabellifolia is unique as the only woody resurrection plant. It is an important plant in southern Africa because of its widespread occurrence and usage in African medicine and traditional culture. Many reports have investigated facets of its biology and the mechanisms associated with its desiccation tolerance. SCOPE The general biology of the woody resurrection plant Myrothamnus flabellifolia is reviewed. The review focuses on the geography and ecology, systematic placement, evolution, morphology and reproductive ecology of M. flabellifolia as well as the wood anatomy and re-filling mechanism. In addition, the desiccation tolerance, ethnobotanical importance and medicinal properties of the plant are reviewed. Also, future research avenues are suggested, in particular the necessity to research the biogeography and systematics of the species and the role of the polyphenols present, as well as the molecular basis of the plant's desiccation tolerance.
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Affiliation(s)
| | - George G. Lindsey
- Department of Molecular and Cellular Biology, University of Cape Town, Private Bag, Rondebosch 7701, South Africa
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Pressel S, Ligrone R, Duckett JG. Effects of de- and rehydration on food-conducting cells in the moss Polytrichum formosum: a cytological study. ANNALS OF BOTANY 2006; 98:67-76. [PMID: 16735407 PMCID: PMC2803544 DOI: 10.1093/aob/mcl092] [Citation(s) in RCA: 47] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/09/2005] [Revised: 12/16/2005] [Accepted: 03/21/2006] [Indexed: 05/09/2023]
Abstract
BACKGROUND AND AIMS Moss food-conducting cells (leptoids and specialized parenchyma cells) have a highly distinctive cytology characterized by a polarized cytoplasmic organization and longitudinal alignment of plastids, mitochondria, endoplasmic reticulum and vesicles along endoplasmic microtubules. Previous studies on the desiccation biology of mosses have focused almost exclusively on photosynthetic tissues; the effects of desiccation on food-conducting cells are unknown. Reported here is a cytological study of the effects of de- and rehydration on food-conducting cells in the desiccation-tolerant moss Polytrichum formosum aimed at exploring whether the remarkable subcellular organization of these cells is related to the ability of mosses to survive desiccation. METHODS Shoots of Polytrichum formosum were dehydrated under natural conditions and prepared for transmission and scanning electron microscopy using both standard and anhydrous chemical fixation protocols. Replicate samples were then fixed at intervals over a 24-h period following rehydration in either water or in a 10 microM solution of the microtubule-disrupting drug oryzalin. KEY RESULTS Desiccation causes dramatic changes; the endoplasmic microtubules disappear; the nucleus, mitochondria and plastids become rounded and the longitudinal alignment of the organelles is lost, though cytoplasmic polarity is in part retained. Prominent stacks of endoplasmic reticulum, typical of the hydrated condition, are replaced with membranous tubules arranged at right angles to the main cellular axis. The internal cytoplasm becomes filled with small vacuoles and the plasmalemma forms labyrinthine tubular extensions outlining newly deposited ingrowths of cell wall material. Whereas plasmodesmata in meristematic cells at the shoot apex and in stem parenchyma cells appear to be unaffected by dehydration, those in leptoids become plugged with electron-opaque material. Starch deposits in parenchyma cells adjoining leptoids are depleted in desiccated plants. Rehydration sees complete reestablishment over a 12- to 24-h period of the cytology seen in the control plants. Oryzalin effectively prevents leptoid recovery. CONCLUSIONS The results point to a key role of the microtubular cytoskeleton in the rapid re-establishment of the elaborate cytoplasmic architecture of leptoids during rehydration. The reassembly of the endoplasmic microtubule system appears to dictate the time frame for the recovery process. The failure of leptoids to recover normal cytology in the presence of oryzalin further underlines the key role of the microtubules in the control of leptoid cytological organization.
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Affiliation(s)
- Silvia Pressel
- School of Biological Sciences, Queen Mary University of London, Mile End Road, London E1 4NS, UK.
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Borisjuk L, Nguyen TH, Neuberger T, Rutten T, Tschiersch H, Claus B, Feussner I, Webb AG, Jakob P, Weber H, Wobus U, Rolletschek H. Gradients of lipid storage, photosynthesis and plastid differentiation in developing soybean seeds. THE NEW PHYTOLOGIST 2005; 167:761-76. [PMID: 16101913 DOI: 10.1111/j.1469-8137.2005.01474.x] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/04/2023]
Abstract
This study establishes a topographical framework for functional investigations on the regulation of lipid biosynthesis and its interaction with embryo photosynthesis in developing soybean seed. Structural observations, combined with molecular and functional parameters, revealed the gradual transformation of chloroplasts into storage organelles, starting from inner regions going outwards. This is evidenced by electron microscopy, confocal laser scanning microscopy, in situ hybridization and histochemical/biochemical data. As a consequence of plastid differentiation, photosynthesis becomes distributed along a gradient within the developing embryo. Electron transport rate, effective quantum yield and O2 production rate are maximal in the embryo periphery, as documented by imaging pulse-amplitude-modulated fluorescence and O2 release via microsensors. The gradual loss of photosynthetic capacity was accompanied by a similarly gradual accumulation of starch and lipids. Noninvasive nuclear magnetic resonance spectroscopy of mature seeds revealed steep gradients in lipid deposition, with the highest concentrations in inner regions. The inverse relationship between photosynthesis and lipid biosynthesis argues against a direct metabolic involvement of photosynthesis in lipid biosynthesis during the late storage stage, but points to a role for photosynthetic oxygen release. This hypothesis is verified in a companion paper.
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Affiliation(s)
- Ljudmilla Borisjuk
- Institut für Pflanzengenetik und Kulturpflanzenforschung, Corrensstr. 3, 06466 Gatersleben, Germany
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Manz B, Müller K, Kucera B, Volke F, Leubner-Metzger G. Water uptake and distribution in germinating tobacco seeds investigated in vivo by nuclear magnetic resonance imaging. PLANT PHYSIOLOGY 2005; 138:1538-51. [PMID: 15980194 PMCID: PMC1176424 DOI: 10.1104/pp.105.061663] [Citation(s) in RCA: 101] [Impact Index Per Article: 5.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/21/2005] [Revised: 04/14/2005] [Accepted: 04/20/2005] [Indexed: 05/03/2023]
Abstract
The regulation of water uptake of germinating tobacco (Nicotiana tabacum) seeds was studied spatially and temporally by in vivo (1)H-nuclear magnetic resonance (NMR) microimaging and (1)H-magic angle spinning NMR spectroscopy. These nondestructive state-of-the-art methods showed that water distribution in the water uptake phases II and III is inhomogeneous. The micropylar seed end is the major entry point of water. The micropylar endosperm and the radicle show the highest hydration. Germination of tobacco follows a distinct pattern of events: rupture of the testa is followed by rupture of the endosperm. Abscisic acid (ABA) specifically inhibits endosperm rupture and phase III water uptake, but does not alter the spatial and temporal pattern of phase I and II water uptake. Testa rupture was associated with an increase in water uptake due to initial embryo elongation, which was not inhibited by ABA. Overexpression of beta-1,3-glucanase in the seed-covering layers of transgenic tobacco seeds did not alter the moisture sorption isotherms or the spatial pattern of water uptake during imbibition, but partially reverted the ABA inhibition of phase III water uptake and of endosperm rupture. In vivo (13)C-magic angle spinning NMR spectroscopy showed that seed oil mobilization is not inhibited by ABA. ABA therefore does not inhibit germination by preventing oil mobilization or by decreasing the water-holding capacity of the micropylar endosperm and the radicle. Our results support the proposal that different seed tissues and organs hydrate at different extents and that the micropylar endosperm region of tobacco acts as a water reservoir for the embryo.
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Affiliation(s)
- Bertram Manz
- Fraunhofer-Institut für Biomedizinische Technik, Arbeitsgruppe Magnetische Resonanz, D-66386 St. Ingbert, Germany
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25
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Zimmermann H, Zimmermann D, Reuss R, Feilen PJ, Manz B, Katsen A, Weber M, Ihmig FR, Ehrhart F, Gessner P, Behringer M, Steinbach A, Wegner LH, Sukhorukov VL, Vásquez JA, Schneider S, Weber MM, Volke F, Wolf R, Zimmermann U. Towards a medically approved technology for alginate-based microcapsules allowing long-term immunoisolated transplantation. JOURNAL OF MATERIALS SCIENCE. MATERIALS IN MEDICINE 2005; 16:491-501. [PMID: 15928863 DOI: 10.1007/s10856-005-0523-2] [Citation(s) in RCA: 125] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/15/2004] [Accepted: 10/15/2004] [Indexed: 05/02/2023]
Abstract
The concept of encapsulated-cell therapy is very appealing, but in practice a great deal of technology and know-how is needed for the production of long-term functional transplants. Alginate is one of the most promising biomaterials for immunoisolation of allogeneic and xenogeneic cells and tissues (such as Langerhans islets). Although great advances in alginate-based cell encapsulation have been reported, several improvements need to be made before routine clinical applications can be considered. Among these is the production of purified alginates with consistently high transplantation-grade quality. This depends to a great extent on the purity of the input algal source as well as on the development of alginate extraction and purification processes that can be validated. A key engineering challenge in designing immunoisolating alginate-based microcapsules is that of maintaining unimpeded exchange of nutrients, oxygen and therapeutic factors (released by the encapsulated cells), while simultaneously avoiding swelling and subsequent rupture of the microcapsules. This requires the development of efficient, validated and well-documented technology for cross-linking alginates with divalent cations. Clinical applications also require validated technology for long-term cryopreservation of encapsulated cells to maintaining a product inventory in order to meet end-user demands. As shown here these demands could be met by the development of novel, validated technologies for production of transplantation-grade alginate and microcapsule engineering and storage. The advances in alginate-based therapy are demonstrated by transplantation of encapsulated rat and human islet grafts that functioned properly for about 1 year in diabetic mice.
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Affiliation(s)
- H Zimmermann
- Abteilung Kryobiophysik & Kryotechnologie, Fraunhofer-Institut für Biomedizinische Technik, 66386, St. Ingbert, Germany
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26
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Reuss R, Ludwig J, Shirakashi R, Ehrhart F, Zimmermann H, Schneider S, Weber MM, Zimmermann U, Schneider H, Sukhorukov VL. Intracellular delivery of carbohydrates into mammalian cells through swelling-activated pathways. J Membr Biol 2005; 200:67-81. [PMID: 15520905 DOI: 10.1007/s00232-004-0694-7] [Citation(s) in RCA: 45] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/01/2004] [Revised: 06/21/2004] [Indexed: 10/26/2022]
Abstract
Volume changes of human T-lymphocytes (Jurkat line) exposed to hypotonic carbohydrate-substituted solutions of different composition and osmolality were studied by videomicroscopy. In 200 mOsm media the cells first swelled within 1-2 min and then underwent regulatory volume decrease (RVD) to their original isotonic volume within 10-15 min. RVD also occurred in strongly hypotonic 100 mOsm solutions of di- and trisaccharides (trehalose, sucrose, raffinose). In contrast to oligosaccharide media, 100 mOsm solutions of monomeric carbohydrates (glucose, galactose, inositol and sorbitol) inhibited RVD. The complex volumetric data were analyzed with a membrane transport model that allowed the estimation of the hydraulic conductivity and volume-dependent solute permeabilities. We found that under slightly hypotonic stress (200 mOsm) the cell membrane was impermeable to all carbohydrates studied here. Upon osmolality decrease to 100 mOsm, the membrane permeability to monomeric carbohydrates increased dramatically (apparently due to channel activation caused by extensive cell swelling), whereas oligosaccharide permeability remained very poor. The size-selectivity of the swelling-activated sugar permeation was confirmed by direct chromatographic measurements of intracellular sugars. The results of this study are of interest for biotechnology, where sugars and related compounds are increasingly being used as potential cryo- and lyoprotective agents for preservation of rare and valuable mammalian cells and tissues.
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Affiliation(s)
- R Reuss
- Lehrstuhl für Biotechnologie, Biozentrum, Universität Würzburg, Am Hubland, Würzburg, Germany
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Leubner-Metzger G. beta-1,3-Glucanase gene expression in low-hydrated seeds as a mechanism for dormancy release during tobacco after-ripening. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2005; 41:133-45. [PMID: 15610356 DOI: 10.1111/j.1365-313x.2004.02284.x] [Citation(s) in RCA: 80] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/24/2023]
Abstract
An air-dry developmental state with low-hydrated tissues is a characteristic of most plant seeds. Seed dormancy is an intrinsic block of germination and can be released during after-ripening, that is air-dry storage of mature seeds. Both seed-covering layers, testa and endosperm, cause the coat-imposed dormancy of tobacco (Nicotiana tabacum). After-ripening and over-expression of class I beta-1,3-glucanase (betaGlu I) confer maternal effects on testa rupture and dormancy release. Very little is known about the molecular mechanisms of after-ripening and whether gene expression is possible in low-hydrated seeds. Transient, low-level betaGlu I transcription and translation was detected during tobacco seed after-ripening. (1)H NMR 2D micro-imaging showed uneven distribution of proton mobility in seeds. betaGlu I gene expression is associated spatially with the inner testa and temporally with the promotion of testa rupture. Local elevation in moisture content seems to permit local, low-level betaGlu I gene transcription and translation in the maternal tissues of air-dry, low-hydrated seeds. De novo gene expression is therefore proposed to be a novel molecular mechanism for the release of coat-imposed dormancy during oilseed after-ripening.
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Affiliation(s)
- Gerhard Leubner-Metzger
- Institut für Biologie II (Botanik/Pflanzenphysiologie), Albert-Ludwigs-Universität Freiburg, Schänzlestr. 1, D-79104 Freiburg i. Br., Germany.
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Rösch P, Schneider H, Zimmermann U, Kiefer W, Popp J. In situ Raman investigation of single lipid droplets in the water-conducting xylem of four woody plant species. Biopolymers 2004; 74:151-6. [PMID: 15137114 DOI: 10.1002/bip.20062] [Citation(s) in RCA: 26] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Abstract
A micro-Raman spectroscopy approach was used for the direct in situ characterization of lipid bodies in the water-conducting branch xylem of an African resurrection plant and three deciduous European tree species. Because of average diameters of at least 1 microm, the lipid bodies of all investigated species proved to be easily accessible by this technique. All vesicle-forming xylem lipids were identified as fatty acid esters, which may correspond to phospholipids. Whereas in the resurrection plant saturated lipids were dominant, the lipid bodies of the European trees consisted of highly unsaturated fatty acids. A comparison of the spectra of lipid droplets of lime obtained in situ and from isolated xylem sap revealed slightly different signatures. This finding suggests that micro-Raman spectroscopy may be used to detect modifications of the chemical composition of biological substances as a result of the extraction mode.
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Affiliation(s)
- P Rösch
- Institut für Physikalische Chemie, Friedrich-Schiller-Universität Jena, Helmholtzweg 4, 07743 Jena, Germany
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29
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Manz B. Combined relaxation and displacement experiment: a fast method to acquire T2, diffusion and velocity maps. JOURNAL OF MAGNETIC RESONANCE (SAN DIEGO, CALIF. : 1997) 2004; 169:60-67. [PMID: 15183357 DOI: 10.1016/j.jmr.2004.04.003] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/20/2004] [Revised: 04/06/2004] [Indexed: 05/24/2023]
Abstract
A fast method for quantitative imaging of T2 and displacement (flow and diffusion) is presented. The pulse sequence combines multi-PGSE NMR with multi-echo acquisition and compensates for flow effects in the read gradient and diffusion during multi-echo trains. The impact of the gradient pulses in a multi-echo train on the signal phase and amplitude is discussed. It is shown that separate T2 and displacement images with microscopic resolution can be obtained within minutes. The capability for 3D flow imaging is demonstrated. The sequence is then used to investigate forced detachment of a biofilm in a tube.
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Affiliation(s)
- Bertram Manz
- Arbeitsgruppe Magnetische Resonanz, Fraunhofer-Institut für Biomedizinische Technik, Ensheimer Strasse 48, 66386 St. Ingbert, Germany.
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30
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Zimmermann U, Schneider H, Wegner LH, Haase A. Water ascent in tall trees: does evolution of land plants rely on a highly metastable state? THE NEW PHYTOLOGIST 2004; 162:575-615. [PMID: 33873767 DOI: 10.1111/j.1469-8137.2004.01083.x] [Citation(s) in RCA: 74] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/12/2023]
Abstract
The Cohesion Theory considers plant xylem as a 'vulnerable pipeline' isolated from the osmotically connected tissue cells, phloem and mycorrhizas living in symbiosis with plant roots. It is believed that water is pulled exclusively by transpiration-induced negative pressure gradients of several megapascals through continuous water columns from the roots to the foliage. Water under such negative pressures is extremely unstable, particularly given the hydrophobicity of the inner xylem walls and sap composition (lipids, proteins, mucopolysaccharides, etc.) that prevents the development of stable negative pressures larger than about -1 MPa. However, many plant physiologists still view the Cohesion Theory as the absolute and universal truth because clever wording from the proponents of this theory has concealed the recent breakdown of the Scholander pressure bomb (and other indirect methods) as qualified tools for measuring negative pressures in transpiring plants. Here we show that the arguments of the proponents of the Cohesion Theory are completely misleading. We further present an enormous bulk of evidence supporting the view that - depending on the species and ecophysiological context - many other forces, additional to low tensions, can be involved in water ascent and that water can be lifted by a series of watergates (like ships in staircase locks). Contents I. Introduction 576 II. Can water sustain negative pressures? 577 III. Negative xylem pressures of several megapascals: fact or mystery? 579 IV. The continuity of the xylem water columns: fact or hypothesis? 588 V. The 'Multi-Force' or 'Watergate' Theory 590 VI. Conclusions 604 Acknowledgements 605 References 605 Appendix 1 612 Appendix 2 613.
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Affiliation(s)
- Ulrich Zimmermann
- Lehrstuhl für Biotechnologie, Biozentrum, Am Hubland, Universität Würzburg, 97074 Würzburg, Germany
| | - Heike Schneider
- Lehrstuhl für Biotechnologie, Biozentrum, Am Hubland, Universität Würzburg, 97074 Würzburg, Germany
| | - Lars H Wegner
- Lehrstuhl für Biotechnologie, Biozentrum, Am Hubland, Universität Würzburg, 97074 Würzburg, Germany
| | - Axel Haase
- Lehrstuhl für Experimentelle Physik V, Am Hubland, Universität Würzburg, 97074 Würzburg, Germany
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