1
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Liu X, Song H, Chu D, Dai X, Wang F, Silvestro D. Heterogeneous selectivity and morphological evolution of marine clades during the Permian-Triassic mass extinction. Nat Ecol Evol 2024:10.1038/s41559-024-02438-0. [PMID: 38862784 DOI: 10.1038/s41559-024-02438-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/13/2024] [Accepted: 05/10/2024] [Indexed: 06/13/2024]
Abstract
Morphological disparity and taxonomic diversity are distinct measures of biodiversity, typically expected to evolve synergistically. However, evidence from mass extinctions indicates that they can be decoupled, and while mass extinctions lead to a drastic loss of diversity, their impact on disparity remains unclear. Here we evaluate the dynamics of morphological disparity and extinction selectivity across the Permian-Triassic mass extinction. We developed an automated approach, termed DeepMorph, for the extraction of morphological features from fossil images using a deep learning model and applied it to a high-resolution temporal dataset encompassing 599 genera across six marine clades. Ammonoids, brachiopods and ostracods experienced a selective loss of complex and ornamented forms, while bivalves, gastropods and conodonts did not experience morphologically selective extinctions. The presence and intensity of morphological selectivity probably reflect the variations in environmental tolerance thresholds among different clades. In clades affected by selective extinctions, the intensity of diversity loss promoted the loss of morphological disparity. Conversely, under non-selective extinctions, the magnitude of diversity loss had a negligible impact on disparity. Our results highlight that the Permian-Triassic mass extinction had heterogeneous morphological selective impacts across clades, offering new insights into how mass extinctions can reshape biodiversity and ecosystem structure.
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Affiliation(s)
- Xiaokang Liu
- State Key Laboratory of Biogeology and Environmental Geology, School of Earth Sciences, China University of Geosciences, Wuhan, China
- Department of Biology, University of Fribourg, Fribourg, Switzerland
| | - Haijun Song
- State Key Laboratory of Biogeology and Environmental Geology, School of Earth Sciences, China University of Geosciences, Wuhan, China.
| | - Daoliang Chu
- State Key Laboratory of Biogeology and Environmental Geology, School of Earth Sciences, China University of Geosciences, Wuhan, China
| | - Xu Dai
- State Key Laboratory of Biogeology and Environmental Geology, School of Earth Sciences, China University of Geosciences, Wuhan, China
| | - Fengyu Wang
- State Key Laboratory of Biogeology and Environmental Geology, School of Earth Sciences, China University of Geosciences, Wuhan, China
| | - Daniele Silvestro
- Department of Biology, University of Fribourg, Fribourg, Switzerland
- Swiss Institute of Bioinformatics, Fribourg, Switzerland
- Gothenburg Global Biodiversity Centre, Department of Biological and Environmental Sciences, University of Gothenburg, Gothenburg, Sweden
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2
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Didier G, Laurin M. Testing extinction events and temporal shifts in diversification and fossilization rates through the skyline Fossilized Birth-Death (FBD) model: The example of some mid-Permian synapsid extinctions. Cladistics 2024; 40:282-306. [PMID: 38651531 DOI: 10.1111/cla.12577] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/31/2023] [Revised: 02/23/2024] [Accepted: 03/07/2024] [Indexed: 04/25/2024] Open
Abstract
In the last decade, the Fossilized Birth-Death (FBD) process has yielded interesting clues about the evolution of biodiversity through time. To facilitate such studies, we extend our method to compute the probability density of phylogenetic trees of extant and extinct taxa in which the only temporal information is provided by the fossil ages (i.e. without the divergence times) in order to deal with the piecewise constant FBD process, known as the "skyline FBD", which allows rates to change between pre-defined time intervals, as well as modelling extinction events at the bounds of these intervals. We develop approaches based on this method to assess hypotheses about the diversification process and to answer questions such as "Does a mass extinction occur at this time?" or "Is there a change in the fossilization rate between two given periods?". Our software can also yield Bayesian and maximum-likelihood estimates of the parameters of the skyline FBD model under various constraints. These approaches are applied to a simulated dataset in order to test their ability to answer the questions above. Finally, we study an updated dataset of Permo-Carboniferous synapsids to get additional insights into the dynamics of biodiversity change in three clades (Ophiacodontidae, Edaphosauridae and Sphenacodontidae) in the Pennsylvanian (Late Carboniferous) and Cisuralian (Early Permian), and to assess support for end-Sakmarian (or Artinskian) and end-Cisuralian mass extinction events discussed in previous studies.
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Affiliation(s)
| | - Michel Laurin
- CR2P ("Centre de Recherches sur la Paléobiodiversité et les Paléoenvironnements"; UMR 7207), CNRS/MNHN/UPMC, Sorbonne Université, Muséum National d'Histoire Naturelle, Paris, France
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3
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Klug C, Spiekman SNF, Bastiaans D, Scheffold B, Scheyer TM. The marine conservation deposits of Monte San Giorgio (Switzerland, Italy): the prototype of Triassic black shale Lagerstätten. SWISS JOURNAL OF PALAEONTOLOGY 2024; 143:11. [PMID: 38450287 PMCID: PMC10912274 DOI: 10.1186/s13358-024-00308-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 08/21/2023] [Accepted: 01/23/2024] [Indexed: 03/08/2024]
Abstract
Marine conservation deposits ('Konservat-Lagerstätten') are characterized by their mode of fossil preservation, faunal composition and sedimentary facies. Here, we review these characteristics with respect to the famous conservation deposit of the Besano Formation (formerly Grenzbitumenzone; including the Anisian-Ladinian boundary), and the successively younger fossil-bearing units Cava inferiore, Cava superiore, Cassina beds and the Kalkschieferzone of Monte San Giorgio (Switzerland and Italy). We compare these units to a selection of important black shale-type Lagerstätten of the global Phanerozoic plus the Ediacaran in order to detect commonalities in their facies, genesis, and fossil content using principal component and hierarchical cluster analyses. Further, we put the Monte San Giorgio type Fossillagerstätten into the context of other comparable Triassic deposits worldwide based on their fossil content. The results of the principal component and cluster analyses allow a subdivision of the 45 analysed Lagerstätten into four groups, for which we suggest the use of the corresponding pioneering localities: Burgess type for the early Palaeozoic black shales, Monte San Giorgio type for the Triassic black shales, Holzmaden type for the pyrite-rich black shales and Solnhofen type for platy limestones.
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Affiliation(s)
- Christian Klug
- Universität Zürich, Paläontologisches Institut, Karl-Schmid-Strasse 4, 8006 Zurich, Switzerland
| | | | - Dylan Bastiaans
- Universität Zürich, Paläontologisches Institut, Karl-Schmid-Strasse 4, 8006 Zurich, Switzerland
| | - Beat Scheffold
- Universität Zürich, Paläontologisches Institut, Karl-Schmid-Strasse 4, 8006 Zurich, Switzerland
| | - Torsten M. Scheyer
- Universität Zürich, Paläontologisches Institut, Karl-Schmid-Strasse 4, 8006 Zurich, Switzerland
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4
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Wu Q, Zhang H, Ramezani J, Zhang FF, Erwin DH, Feng Z, Shao LY, Cai YF, Zhang SH, Xu YG, Shen SZ. The terrestrial end-Permian mass extinction in the paleotropics postdates the marine extinction. SCIENCE ADVANCES 2024; 10:eadi7284. [PMID: 38295161 PMCID: PMC10830061 DOI: 10.1126/sciadv.adi7284] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/15/2023] [Accepted: 12/29/2023] [Indexed: 02/02/2024]
Abstract
The end-Permian mass extinction was the most severe ecological event during the Phanerozoic and has long been presumed contemporaneous across terrestrial and marine realms with global environmental deterioration triggered by the Siberian Traps Large Igneous Province. We present high-precision zircon U-Pb geochronology by the chemical abrasion-isotope dilution-thermal ionization mass spectrometry technique on tuffs from terrestrial to transitional coastal settings in Southwest China, which reveals a protracted collapse of the Cathaysian rainforest beginning after the onset of the end-Permian marine extinction. Integrated with high-resolution geochronology from coeval successions, our results suggest that the terrestrial extinction occurred diachronously with latitude, beginning at high latitudes during the late Changhsingian and progressing to the tropics by the early Induan, spanning a duration of nearly 1 million years. This latitudinal age gradient may have been related to variations in surface warming with more degraded environmental conditions at higher latitudes contributing to higher extinction rates.
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Affiliation(s)
- Qiong Wu
- Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou), Guangzhou 511458, China
- State Key Laboratory for Mineral Deposits Research and School of Earth Sciences and Engineering, Nanjing University, Nanjing 210023, China
| | - Hua Zhang
- LPS, Nanjing Institute of Geology and Palaeontology and Center for Excellence in Life and Paleoenvironment, Chinese Academy of Sciences, Nanjing 210008, China
| | - Jahandar Ramezani
- Department of Earth, Atmospheric, and Planetary Sciences, Massachusetts Institute of Technology, Cambridge, MA 02139, USA
| | - Fei-fei Zhang
- State Key Laboratory for Mineral Deposits Research and School of Earth Sciences and Engineering, Nanjing University, Nanjing 210023, China
| | - Douglas H. Erwin
- Department of Paleobiology, MRC-121, National Museum of Natural History, Washington, DC 20013-7012, USA
- Santa Fe Institute, 1399 Hyde Park Road, Santa Fe, NM 87501, USA
| | - Zhuo Feng
- Institute of Palaeontology, Yunnan Key Laboratory of Earth System Science, Yunnan Key Laboratory for Palaeobiology, MEC International Joint Laboratory for Palaeobiology and Palaeoenvironment, Yunnan University, Kunming 650500, China
- Southwest United Graduate School, Kunming 650092, China
| | - Long-yi Shao
- State Key Laboratory of Coal Resources and Safe Mining and College of Geoscience and Surveying Engineering, China University of Mining and Technology (Beijing), Beijing 100083, China
| | - Yao-feng Cai
- LPS, Nanjing Institute of Geology and Palaeontology and Center for Excellence in Life and Paleoenvironment, Chinese Academy of Sciences, Nanjing 210008, China
| | - Shu-han Zhang
- State Key Laboratory for Mineral Deposits Research and School of Earth Sciences and Engineering, Nanjing University, Nanjing 210023, China
| | - Yi-gang Xu
- Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou), Guangzhou 511458, China
- State Key Laboratory of Isotope Geochemistry and Center of Excellence in Deep Earth Science, Guangzhou Institute of Geochemistry, Chinese Academy of Sciences, Guangzhou 510640, China
| | - Shu-zhong Shen
- State Key Laboratory for Mineral Deposits Research and School of Earth Sciences and Engineering, Nanjing University, Nanjing 210023, China
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5
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Deutsch C, Penn JL, Lucey N. Climate, Oxygen, and the Future of Marine Biodiversity. ANNUAL REVIEW OF MARINE SCIENCE 2024; 16:217-245. [PMID: 37708422 DOI: 10.1146/annurev-marine-040323-095231] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 09/16/2023]
Abstract
The ocean enabled the diversification of life on Earth by adding O2 to the atmosphere, yet marine species remain most subject to O2 limitation. Human industrialization is intensifying the aerobic challenges to marine ecosystems by depleting the ocean's O2 inventory through the global addition of heat and local addition of nutrients. Historical observations reveal an ∼2% decline in upper-ocean O2 and accelerating reports of coastal mass mortality events. The dynamic balance of O2 supply and demand provides a unifying framework for understanding these phenomena across scales from the global ocean to individual organisms. Using this framework, we synthesize recent advances in forecasting O2 loss and its impacts on marine biogeography, biodiversity, and biogeochemistry. We also highlight three outstanding uncertainties: how long-term global climate change intensifies ocean weather events in which simultaneous heat and hypoxia create metabolic storms, how differential species O2 sensitivities alter the structure of ecological communities, and how global O2 loss intersects with coastal eutrophication. Projecting these interacting impacts on future marine ecosystems requires integration of climate dynamics, biogeochemistry, physiology, and ecology, evaluated with an eye on Earth history. Reducing global and local impacts of warming and O2 loss will be essential if humankind is to preserve the health and biodiversity of the future ocean.
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Affiliation(s)
- Curtis Deutsch
- Department of Geosciences, Princeton University, Princeton, New Jersey, USA;
- High Meadows Environmental Institute, Princeton University, Princeton, New Jersey, USA
| | - Justin L Penn
- Department of Geosciences, Princeton University, Princeton, New Jersey, USA;
| | - Noelle Lucey
- High Meadows Environmental Institute, Princeton University, Princeton, New Jersey, USA
- Smithsonian Tropical Research Institute, Balboa Ancón, Panama
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6
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Saito R, Wörmer L, Taubner H, Kaiho K, Takahashi S, Tian L, Ikeda M, Summons RE, Hinrichs KU. Centennial scale sequences of environmental deterioration preceded the end-Permian mass extinction. Nat Commun 2023; 14:2113. [PMID: 37059714 PMCID: PMC10104797 DOI: 10.1038/s41467-023-37717-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/30/2022] [Accepted: 03/28/2023] [Indexed: 04/16/2023] Open
Abstract
The exact drivers for the end-Permian mass extinction (EPME) remain controversial. Here we focus on a ~10,000 yr record from the marine type section at Meishan, China, preceding and covering the onset of the EPME. Analyses of polyaromatic hydrocarbons at sampling intervals representing 1.5-6.3 yr reveal recurrent pulses of wildfires in the terrestrial realm. Massive input pulses of soil-derived organic matter and clastic materials into the oceans are indicated by patterns of C2-dibenzofuran, C30 hopane and aluminum. Importantly, in the ~2,000 years preceding the main phase of the EPME, we observe a clearly defined sequence of wildfires, soil weathering, and euxinia provoked by the fertilization of the marine environment with soil-derived nutrients. Euxinia is indicated by sulfur and iron concentrations. Our study suggests that, in South China, centennial scale processes led to a collapse of the terrestrial ecosystem ~300 yr (120-480 yr; ± 2 s.d.) before the onset of the EPME and that this collapse induced euxinic conditions in the ocean, ultimately resulting in the demise of marine ecosystems.
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Affiliation(s)
- Ryosuke Saito
- MARUM - Center for Marine Environmental Sciences & Faculty of Geosciences, University of Bremen, 28359, Bremen, Germany.
- Department of Earth, Atmospheric and Planetary Sciences, Massachusetts Institute of Technology, 45 Carleton Street, Cambridge, MA, 02142, USA.
- Graduate School of Sciences and Technology for Innovation, Yamaguchi University, 1677-1 Yoshida, Yamaguchi City, 753-8512, Japan.
- Japan Science and Technology Agency, PRESTO, 4-1-8 Honcho, Kawaguchi, Saitama, 332-0012, Japan.
| | - Lars Wörmer
- MARUM - Center for Marine Environmental Sciences & Faculty of Geosciences, University of Bremen, 28359, Bremen, Germany
| | - Heidi Taubner
- MARUM - Center for Marine Environmental Sciences & Faculty of Geosciences, University of Bremen, 28359, Bremen, Germany
| | - Kunio Kaiho
- Department of Earth Science, Tohoku University, Sendai, 980-8578, Japan
| | - Satoshi Takahashi
- Department of Earth and Environmental Sciences, Graduate School of Environmental Studies, Nagoya University, Nagoya, 464-8601, Japan
| | - Li Tian
- The Key Laboratory of Biogeology and Environmental Geology and Faculty of Earth Science, China University of Geosciences Wuhan, Wuhan, 430074, China
| | - Masayuki Ikeda
- Department of Earth and Planetary Science, University of Tokyo, Bunkyo, 113-0033, Japan
| | - Roger E Summons
- Department of Earth, Atmospheric and Planetary Sciences, Massachusetts Institute of Technology, 45 Carleton Street, Cambridge, MA, 02142, USA
| | - Kai-Uwe Hinrichs
- MARUM - Center for Marine Environmental Sciences & Faculty of Geosciences, University of Bremen, 28359, Bremen, Germany
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7
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Wignall PB. Paleobiology: Anatomy of a mass extinction double whammy. Curr Biol 2023; 33:R233-R235. [PMID: 36977387 DOI: 10.1016/j.cub.2023.02.008] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/29/2023]
Abstract
The Permo-Triassic mass extinction has been resolved into two closely spaced crises that both saw enormous extinction losses. However, food web modelling suggests they were not ecologically equivalent, only the second destabilised communities.
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Affiliation(s)
- Paul B Wignall
- School of Earth and Environment, University of Leeds, Leeds LS2 9JT, UK.
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8
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Wu Y, Cui Y, Chu D, Song H, Tong J, Dal Corso J, Ridgwell A. Volcanic CO 2 degassing postdates thermogenic carbon emission during the end-Permian mass extinction. SCIENCE ADVANCES 2023; 9:eabq4082. [PMID: 36791190 PMCID: PMC9931219 DOI: 10.1126/sciadv.abq4082] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 04/13/2022] [Accepted: 01/18/2023] [Indexed: 06/18/2023]
Abstract
Massive carbon dioxide (CO2) emissions are widely assumed to be the driver of the end-Permian mass extinction (EPME). However, the rate of and total CO2 released, and whether the source changes with time, remain poorly understood, leaving a key question surrounding the trigger for the EPME unanswered. Here, we assimilate reconstructions of atmospheric Pco2 and carbonate δ13C in an Earth system model to unravel the history of carbon emissions and sources across the EPME. We infer a transition from a CO2 source with a thermogenic carbon isotopic signature associated with a slower emission rate to a heavier, more mantle-dominated volcanic source with an increased rate of emissions. This implies that the CO2 degassing style changed as the Siberian Traps emplacement evolved, which is consistent with geochemical proxy records. Carbon cycle feedbacks from terrestrial ecosystem disturbances may have further amplified the warming and the severity of marine extinctions.
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Affiliation(s)
- Yuyang Wu
- State Key Laboratory of Biogeology and Environmental Geology, School of Earth Sciences, China University of Geosciences, Wuhan 430074, China
- Department of Earth and Environmental Studies, Montclair State University, Montclair, NJ 07043, USA
| | - Ying Cui
- Department of Earth and Environmental Studies, Montclair State University, Montclair, NJ 07043, USA
| | - Daoliang Chu
- State Key Laboratory of Biogeology and Environmental Geology, School of Earth Sciences, China University of Geosciences, Wuhan 430074, China
| | - Haijun Song
- State Key Laboratory of Biogeology and Environmental Geology, School of Earth Sciences, China University of Geosciences, Wuhan 430074, China
| | - Jinnan Tong
- State Key Laboratory of Biogeology and Environmental Geology, School of Earth Sciences, China University of Geosciences, Wuhan 430074, China
| | - Jacopo Dal Corso
- State Key Laboratory of Biogeology and Environmental Geology, School of Earth Sciences, China University of Geosciences, Wuhan 430074, China
| | - Andy Ridgwell
- Department of Earth Sciences, University of California Riverside, Riverside, CA 92521, USA
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9
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Liu F, Peng H, Marshall JE, Lomax BH, Bomfleur B, Kent MS, Fraser WT, Jardine PE. Dying in the Sun: Direct evidence for elevated UV-B radiation at the end-Permian mass extinction. SCIENCE ADVANCES 2023; 9:eabo6102. [PMID: 36608140 PMCID: PMC9821938 DOI: 10.1126/sciadv.abo6102] [Citation(s) in RCA: 5] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 07/26/2022] [Accepted: 12/07/2022] [Indexed: 06/17/2023]
Abstract
Land plants can adjust the concentration of protective ultraviolet B (UV-B)-absorbing compounds (UACs) in the outer wall of their reproductive propagules in response to ambient UV-B flux. To infer changes in UV-B radiation flux at Earth's surface during the end-Permian mass extinction, we analyze UAC abundances in ca. 800 pollen grains from an independently dated Permian-Triassic boundary section in Tibet. Our data reveal an excursion in UACs that coincide with a spike in mercury concentration and a negative carbon-isotope excursion in the latest Permian deposits, suggesting a close temporal link between large-scale volcanic eruptions, global carbon and mercury cycle perturbations, and ozone layer disruption. Because enhanced UV-B radiation can exacerbate the environmental deterioration induced by massive magmatism, ozone depletion is considered a compelling ecological driver for the terrestrial mass extinction.
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Affiliation(s)
- Feng Liu
- Nanjing Institute of Geology and Palaeontology, Chinese Academy of Sciences, Nanjing 210008, China
- State Key Laboratory of Palaeobiology and Stratigraphy and Center for Excellence in Life and Paleoenvironment, Nanjing 210008, China
| | - Huiping Peng
- Nanjing Institute of Geology and Palaeontology, Chinese Academy of Sciences, Nanjing 210008, China
| | - John E. A. Marshall
- School of Ocean and Earth Science, University of Southampton, National Oceanography Centre, Southampton, SO14 3ZH, UK
| | - Barry H. Lomax
- Division of Agricultural and Environmental Sciences, The School of Biosciences, The University of Nottingham, Sutton Bonington Campus, Sutton Bonington, Leicestershire, LE12 5RD, UK
| | - Benjamin Bomfleur
- Palaeobotany Group, Institute of Geology and Palaeontology, University of Münster, Münster 48149, Germany
| | - Matthew S. Kent
- Division of Agricultural and Environmental Sciences, The School of Biosciences, The University of Nottingham, Sutton Bonington Campus, Sutton Bonington, Leicestershire, LE12 5RD, UK
| | - Wesley T. Fraser
- Geography, School of Social Sciences, Oxford Brookes University, Oxford OX3 0BP, UK
| | - Phillip E. Jardine
- Palaeobotany Group, Institute of Geology and Palaeontology, University of Münster, Münster 48149, Germany
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10
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Shen J, Chen J, Yu J, Algeo TJ, Smith RMH, Botha J, Frank TD, Fielding CR, Ward PD, Mather TA. Mercury evidence from southern Pangea terrestrial sections for end-Permian global volcanic effects. Nat Commun 2023; 14:6. [PMID: 36596767 PMCID: PMC9810726 DOI: 10.1038/s41467-022-35272-8] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/21/2022] [Accepted: 11/25/2022] [Indexed: 01/04/2023] Open
Abstract
The latest Permian mass extinction (LPME) was triggered by magmatism of the Siberian Traps Large Igneous Province (STLIP), which left an extensive record of sedimentary Hg anomalies at Northern Hemisphere and tropical sites. Here, we present Hg records from terrestrial sites in southern Pangea, nearly antipodal to contemporaneous STLIP activity, providing insights into the global distribution of volcanogenic Hg during this event and its environmental processing. These profiles (two from Karoo Basin, South Africa; two from Sydney Basin, Australia) exhibit significant Hg enrichments within the uppermost Permian extinction interval as well as positive Δ199Hg excursions (to ~0.3‰), providing evidence of long-distance atmospheric transfer of volcanogenic Hg. These results demonstrate the far-reaching effects of the Siberian Traps as well as refine stratigraphic placement of the LPME interval in the Karoo Basin at a temporal resolution of ~105 years based on global isochronism of volcanogenic Hg anomalies.
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Affiliation(s)
- Jun Shen
- State Key Laboratory of Geological Processes and Mineral Resources, China University of Geosciences, Wuhan, Hubei, 430074, People's Republic of China.
| | - Jiubin Chen
- Institute of Surface-Earth System Science, Tianjin University, Tianjin, 300072, People's Republic of China
| | - Jianxin Yu
- State Key Laboratory of Biogeology and Environmental Geology, China University of Geosciences, Wuhan, Hubei, 430074, People's Republic of China
| | - Thomas J Algeo
- State Key Laboratory of Geological Processes and Mineral Resources, China University of Geosciences, Wuhan, Hubei, 430074, People's Republic of China.,State Key Laboratory of Biogeology and Environmental Geology, China University of Geosciences, Wuhan, Hubei, 430074, People's Republic of China.,Department of Geosciences, University of Cincinnati, Cincinnati, OH, 45221-0013, USA
| | - Roger M H Smith
- Evolutionary Studies Institute, University of the Witwatersrand, Johannesburg, 2050, South Africa.,Iziko South African Museum, PO Box 61, Cape Town, 8000, South Africa
| | - Jennifer Botha
- Evolutionary Studies Institute, University of the Witwatersrand, Johannesburg, 2050, South Africa.,National Museum, PO Box 266, Bloemfontein, 9300, South Africa
| | - Tracy D Frank
- Department of Earth Sciences, University of Connecticut, Storrs, CT, 06269, USA
| | | | - Peter D Ward
- Department of Biology, University of Washington, Seattle, WA, 98195-1800, USA
| | - Tamsin A Mather
- Department of Earth Sciences, University of Oxford, South Parks Road, Oxford, OX1 3AN, UK
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11
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Kozik NP, Young SA, Newby SM, Liu M, Chen D, Hammarlund EU, Bond DPG, Them TR, Owens JD. Rapid marine oxygen variability: Driver of the Late Ordovician mass extinction. SCIENCE ADVANCES 2022; 8:eabn8345. [PMID: 36399571 PMCID: PMC9674285 DOI: 10.1126/sciadv.abn8345] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 12/22/2021] [Accepted: 09/30/2022] [Indexed: 06/16/2023]
Abstract
The timing and connections between global cooling, marine redox conditions, and biotic turnover are underconstrained for the Late Ordovician. The second most severe mass extinction occurred at the end of the Ordovician period, resulting in ~85% loss of marine species between two extinction pulses. As the only "Big 5" extinction that occurred during icehouse conditions, this interval is an important modern analog to constrain environmental feedbacks. We present a previously unexplored thallium isotope records from two paleobasins that record global marine redox conditions and document two distinct and rapid excursions suggesting vacillating (de)oxygenation. The strong temporal link between these perturbations and extinctions highlights the possibility that dynamic marine oxygen fluctuations, rather than persistent, stable global anoxia, played a major role in driving the extinction. This evidence for rapid oxygen changes leading to mass extinction has important implications for modern deoxygenation and biodiversity declines.
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Affiliation(s)
- Nevin P. Kozik
- Department of Earth, Ocean and Atmospheric Science – National High Magnetic Field Laboratory, Florida State University, Tallahassee, FL 32306, USA
| | - Seth A. Young
- Department of Earth, Ocean and Atmospheric Science – National High Magnetic Field Laboratory, Florida State University, Tallahassee, FL 32306, USA
| | - Sean M. Newby
- Department of Earth, Ocean and Atmospheric Science – National High Magnetic Field Laboratory, Florida State University, Tallahassee, FL 32306, USA
| | - Mu Liu
- Key Laboratory of Cenozoic Geology and Environment, Institute of Geology and Geophysics, Chinese Academy of Sciences, Beijing 100029, China
- University of Chinese Academy of Sciences, Beijing 100049, China
| | - Daizhao Chen
- Key Laboratory of Cenozoic Geology and Environment, Institute of Geology and Geophysics, Chinese Academy of Sciences, Beijing 100029, China
- University of Chinese Academy of Sciences, Beijing 100049, China
| | - Emma U. Hammarlund
- Tissue Development and Evolution (TiDE) Division, Department of Laboratory Medicine, Lund University, Lund, Sweden
| | - David P. G. Bond
- Department of Geography, Geology and Environment, University of Hull, Hull HU6 7RX, UK
| | - Theodore R. Them
- Department of Geology and Environmental Geosciences, College of Charleston, Charleston, SC 29424, USA
| | - Jeremy D. Owens
- Department of Earth, Ocean and Atmospheric Science – National High Magnetic Field Laboratory, Florida State University, Tallahassee, FL 32306, USA
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12
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Mohapatra S, Mohapatra S, Han H, Ariza-Montes A, López-Martín MDC. Climate change and vulnerability of agribusiness: Assessment of climate change impact on agricultural productivity. Front Psychol 2022; 13:955622. [PMID: 36389529 PMCID: PMC9645113 DOI: 10.3389/fpsyg.2022.955622] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/29/2022] [Accepted: 08/08/2022] [Indexed: 11/29/2022] Open
Abstract
The current study has mapped the impact of changes in different climatic parameters on the productivity of major crops cultivated in India like cereal, pulses, and oilseed crops. The vulnerability of crops to different climatic conditions like exposure, sensitivity, and adaptive indicators along with its different components and agribusiness has been studied. The study uses data collected over the past six decades from 1960 to 2020. Analytical tools such as the Tobit regression model and Principal Component Analysis were used for the investigation which has shown that among climatic parameters, an increase in temperature along with huge variations in rainfall and consistent increase in CO2 emissions have had a negative impact by reducing crop productivity, particularly cereals (26 percent) and oilseed (35 percent). Among various factors, adaptive factors such as cropping intensity, agricultural machinery, and livestock density in combination with sensitivity factors such as average operational land holding size and productivity of cereals, and exposure indicators like Kharif (June-September) temperature, heavy rainfall, and rate of change in maximum and minimum Rabi (October-February) temperature have contributed significantly in increasing crop vulnerability. The agribusiness model needs to be more inclusive. It should pay attention to small and remote farmers, and provide them with inclusive finance that can facilitate the adoption of climate-smart financial innovations, serve the underserved segments, and help them reach the target of a sustainable and inclusive agribusiness model. Though the social, technological, and economic initiatives can enhance the adaptive capacity of farmers, political measures still have a major role to play in providing a healthy climate for agriculture in India through tailored adaptive approaches like the adoption of craft climate adaptation program, dilating the irrigation coverage and location-centric management options. Hence, multidisciplinary and holistic approaches are worth emphasizing for evaluating the future impacts of change in climate on Indian agriculture.
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Affiliation(s)
- Shruti Mohapatra
- Faculty of Agriculture, Sri Sri University, Cuttack, Odisha, India
| | - Swati Mohapatra
- School of Science, Gujarat State Fertilizers and Chemicals University, Vadodara, Gujarat, India
| | - Heesup Han
- College of Hospitality and Tourism Management, Sejong University, Seoul, South Korea
- *Correspondence: Heesup Han
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13
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Marine siliceous ecosystem decline led to sustained anomalous Early Triassic warmth. Nat Commun 2022; 13:3509. [PMID: 35717338 PMCID: PMC9206662 DOI: 10.1038/s41467-022-31128-3] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/31/2021] [Accepted: 06/06/2022] [Indexed: 11/26/2022] Open
Abstract
In the wake of rapid CO2 release tied to the emplacement of the Siberian Traps, elevated temperatures were maintained for over five million years during the end-Permian biotic crisis. This protracted recovery defies our current understanding of climate regulation via the silicate weathering feedback, and hints at a fundamentally altered carbon and silica cycle. Here, we propose that the development of widespread marine anoxia and Si-rich conditions, linked to the collapse of the biological silica factory, warming, and increased weathering, was capable of trapping Earth’s system within a hyperthermal by enhancing ocean-atmosphere CO2 recycling via authigenic clay formation. While solid-Earth degassing may have acted as a trigger, subsequent biotic feedbacks likely exacerbated and prolonged the environmental crisis. This refined view of the carbon-silica cycle highlights that the ecological success of siliceous organisms exerts a potentially significant influence on Earth’s climate regime. The widespread disappearance of siliceous life sustained extreme temperatures in the wake of Earth’s most severe mass extinction event.
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14
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Phukhamsakda C, Nilsson RH, Bhunjun CS, de Farias ARG, Sun YR, Wijesinghe SN, Raza M, Bao DF, Lu L, Tibpromma S, Dong W, Tennakoon DS, Tian XG, Xiong YR, Karunarathna SC, Cai L, Luo ZL, Wang Y, Manawasinghe IS, Camporesi E, Kirk PM, Promputtha I, Kuo CH, Su HY, Doilom M, Li Y, Fu YP, Hyde KD. The numbers of fungi: contributions from traditional taxonomic studies and challenges of metabarcoding. FUNGAL DIVERS 2022. [DOI: 10.1007/s13225-022-00502-3] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
Abstract
AbstractThe global diversity of fungi has been estimated using several different approaches. There is somewhere between 2–11 million estimated species, but the number of formally described taxa is around 150,000, a tiny fraction of the total. In this paper, we examine 12 ascomycete genera as case studies to establish trends in fungal species descriptions, and introduce new species in each genus. To highlight the importance of traditional morpho-molecular methods in publishing new species, we introduce novel taxa in 12 genera that are considered to have low species discovery. We discuss whether the species are likely to be rare or due to a lack of extensive sampling and classification. The genera are Apiospora, Bambusicola, Beltrania, Capronia, Distoseptispora, Endocalyx, Neocatenulostroma, Neodeightonia, Paraconiothyrium, Peroneutypa, Phaeoacremonium and Vanakripa. We discuss host-specificity in selected genera and compare the number of species epithets in each genus with the number of ITS (barcode) sequences deposited in GenBank and UNITE. We furthermore discuss the relationship between the divergence times of these genera with those of their hosts. We hypothesize whether there might be more species in these genera and discuss hosts and habitats that should be investigated for novel species discovery.
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15
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Knowledge Gaps and Missing Links in Understanding Mass Extinctions: Can Mathematical Modeling Help? Phys Life Rev 2022; 41:22-57. [DOI: 10.1016/j.plrev.2022.04.001] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/16/2022] [Accepted: 04/11/2022] [Indexed: 11/20/2022]
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16
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Cowie RH, Bouchet P, Fontaine B. The Sixth Mass Extinction: fact, fiction or speculation? Biol Rev Camb Philos Soc 2022; 97:640-663. [PMID: 35014169 PMCID: PMC9786292 DOI: 10.1111/brv.12816] [Citation(s) in RCA: 81] [Impact Index Per Article: 40.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/28/2020] [Revised: 11/04/2021] [Accepted: 11/08/2021] [Indexed: 12/30/2022]
Abstract
There have been five Mass Extinction events in the history of Earth's biodiversity, all caused by dramatic but natural phenomena. It has been claimed that the Sixth Mass Extinction may be underway, this time caused entirely by humans. Although considerable evidence indicates that there is a biodiversity crisis of increasing extinctions and plummeting abundances, some do not accept that this amounts to a Sixth Mass Extinction. Often, they use the IUCN Red List to support their stance, arguing that the rate of species loss does not differ from the background rate. However, the Red List is heavily biased: almost all birds and mammals but only a minute fraction of invertebrates have been evaluated against conservation criteria. Incorporating estimates of the true number of invertebrate extinctions leads to the conclusion that the rate vastly exceeds the background rate and that we may indeed be witnessing the start of the Sixth Mass Extinction. As an example, we focus on molluscs, the second largest phylum in numbers of known species, and, extrapolating boldly, estimate that, since around AD 1500, possibly as many as 7.5-13% (150,000-260,000) of all ~2 million known species have already gone extinct, orders of magnitude greater than the 882 (0.04%) on the Red List. We review differences in extinction rates according to realms: marine species face significant threats but, although previous mass extinctions were largely defined by marine invertebrates, there is no evidence that the marine biota has reached the same crisis as the non-marine biota. Island species have suffered far greater rates than continental ones. Plants face similar conservation biases as do invertebrates, although there are hints they may have suffered lower extinction rates. There are also those who do not deny an extinction crisis but accept it as a new trajectory of evolution, because humans are part of the natural world; some even embrace it, with a desire to manipulate it for human benefit. We take issue with these stances. Humans are the only species able to manipulate the Earth on a grand scale, and they have allowed the current crisis to happen. Despite multiple conservation initiatives at various levels, most are not species oriented (certain charismatic vertebrates excepted) and specific actions to protect every living species individually are simply unfeasible because of the tyranny of numbers. As systematic biologists, we encourage the nurturing of the innate human appreciation of biodiversity, but we reaffirm the message that the biodiversity that makes our world so fascinating, beautiful and functional is vanishing unnoticed at an unprecedented rate. In the face of a mounting crisis, scientists must adopt the practices of preventive archaeology, and collect and document as many species as possible before they disappear. All this depends on reviving the venerable study of natural history and taxonomy. Denying the crisis, simply accepting it and doing nothing, or even embracing it for the ostensible benefit of humanity, are not appropriate options and pave the way for the Earth to continue on its sad trajectory towards a Sixth Mass Extinction.
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Affiliation(s)
- Robert H. Cowie
- Pacific Biosciences Research CenterUniversity of HawaiiHonoluluHawaii96822U.S.A.
| | - Philippe Bouchet
- Institut Systématique Evolution Biodiversité (ISYEB), Muséum National d'Histoire Naturelle, CNRS, Sorbonne Université, EPHEUniversité des Antilles57 rue Cuvier CP 5175005 ParisFrance
| | - Benoît Fontaine
- UMS 2006 Patrinat (OFB, CNRS, MNHN), Centre d'Écologie et des Sciences de la Conservation (UMR 7204), Muséum National d'Histoire Naturelle43 rue Buffon CP 13575005 ParisFrance
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17
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Gilbert PUPA, Bergmann KD, Boekelheide N, Tambutté S, Mass T, Marin F, Adkins JF, Erez J, Gilbert B, Knutson V, Cantine M, Hernández JO, Knoll AH. Biomineralization: Integrating mechanism and evolutionary history. SCIENCE ADVANCES 2022; 8:eabl9653. [PMID: 35263127 PMCID: PMC8906573 DOI: 10.1126/sciadv.abl9653] [Citation(s) in RCA: 53] [Impact Index Per Article: 26.5] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/05/2023]
Abstract
Calcium carbonate (CaCO3) biomineralizing organisms have played major roles in the history of life and the global carbon cycle during the past 541 Ma. Both marine diversification and mass extinctions reflect physiological responses to environmental changes through time. An integrated understanding of carbonate biomineralization is necessary to illuminate this evolutionary record and to understand how modern organisms will respond to 21st century global change. Biomineralization evolved independently but convergently across phyla, suggesting a unity of mechanism that transcends biological differences. In this review, we combine CaCO3 skeleton formation mechanisms with constraints from evolutionary history, omics, and a meta-analysis of isotopic data to develop a plausible model for CaCO3 biomineralization applicable to all phyla. The model provides a framework for understanding the environmental sensitivity of marine calcifiers, past mass extinctions, and resilience in 21st century acidifying oceans. Thus, it frames questions about the past, present, and future of CaCO3 biomineralizing organisms.
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Affiliation(s)
- Pupa U. P. A. Gilbert
- Departments of Physics, Chemistry, Geoscience, and Materials Science, University of Wisconsin-Madison, Madison, WI 53706, USA
- Chemical Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA
- Corresponding author. (P.U.P.A.G.); (A.H.K.)
| | - Kristin D. Bergmann
- Department of Earth, Atmospheric and Planetary Sciences, Massachusetts Institute of Technology, Cambridge, MA 02139, USA
| | - Nicholas Boekelheide
- Department of Earth, Atmospheric and Planetary Sciences, Massachusetts Institute of Technology, Cambridge, MA 02139, USA
| | - Sylvie Tambutté
- Centre Scientifique de Monaco, Department of Marine Biology, 98000 Monaco, Principality of Monaco
| | - Tali Mass
- University of Haifa, Marine Biology Department, Mt. Carmel, Haifa 31905, Israel
| | - Frédéric Marin
- Université de Bourgogne–Franche-Comté (UBFC), Laboratoire Biogéosciences, UMR CNRS 6282, Bâtiment des Sciences Gabriel, 21000 Dijon, France
| | - Jess F. Adkins
- Geological and Planetary Sciences, California Institute of Technology, MS 100-23, Pasadena, CA 91125, USA
| | - Jonathan Erez
- The Hebrew University of Jerusalem, Institute of Earth Sciences, Jerusalem 91904, Israel
| | - Benjamin Gilbert
- Energy Geoscience Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA
- Department of Earth and Planetary Science, University of California, Berkeley, Berkeley, CA 94720, USA
| | - Vanessa Knutson
- Department of Organismic and Evolutionary Biology, Harvard University, Cambridge, MA 02138, USA
| | - Marjorie Cantine
- Department of Earth, Atmospheric and Planetary Sciences, Massachusetts Institute of Technology, Cambridge, MA 02139, USA
- Goethe-Universität Frankfurt, 60438 Frankfurt am Main, Germany
| | - Javier Ortega Hernández
- Department of Organismic and Evolutionary Biology, Harvard University, Cambridge, MA 02138, USA
| | - Andrew H. Knoll
- Department of Organismic and Evolutionary Biology, Harvard University, Cambridge, MA 02138, USA
- Corresponding author. (P.U.P.A.G.); (A.H.K.)
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18
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Vera M, Maroso F, Wilmes S, Hermida M, Blanco A, Fernández C, Groves E, Malham SK, Bouza C, Robins PE, Martínez P. Genomic survey of edible cockle (
Cerastoderma edule
) in the Northeast Atlantic: a baseline for sustainable management of its wild resources. Evol Appl 2021; 15:262-285. [PMID: 35233247 PMCID: PMC8867702 DOI: 10.1111/eva.13340] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/21/2020] [Revised: 12/16/2021] [Accepted: 12/23/2021] [Indexed: 11/12/2022] Open
Abstract
Knowledge on correlations between environmental factors and genome divergence between populations of marine species is crucial for sustainable management of fisheries and wild populations. The edible cockle (Cerastoderma edule) is a marine bivalve distributed along the Northeast Atlantic coast of Europe and is an important resource from both commercial and ecological perspectives. We performed a population genomics screening using 2b‐RAD genotyping on 9309 SNPs localized in the cockle's genome on a sample of 536 specimens pertaining to 14 beds in the Northeast Atlantic Ocean to analyse the genetic structure with regard to environmental variables. Larval dispersal modelling considering species behaviour and interannual/interseasonal variation in ocean conditions was carried out as an essential background to which compare genetic information. Cockle populations in the Northeast Atlantic displayed low but significant geographical differentiation between populations (FST = 0.0240; p < 0.001), albeit not across generations. We identified 742 and 36 outlier SNPs related to divergent and balancing selection in all the geographical scenarios inspected, and sea temperature and salinity were the main environmental correlates suggested. Highly significant linkage disequilibrium was detected at specific genomic regions against the very low values observed across the whole genome. Two main genetic groups were identified, northwards and southwards of French Brittany. Larval dispersal modelling suggested a barrier for larval dispersal linked to the Ushant front that could explain these two genetic clusters. Further genetic subdivision was observed using outlier loci and considering larval advection. The northern group was divided into the Irish/Celtic Seas and the English Channel/North Sea, while the southern group was divided into three subgroups. This information represents the baseline for the management of cockles, designing conservation strategies, founding broodstock for depleted beds and producing suitable seed for aquaculture production.
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Affiliation(s)
- Manuel Vera
- Department of Zoology, Genetics and Physical Anthropology. ACUIGEN group. Faculty of Veterinary Universidade de Santiago de Compostela. Campus of Lugo 27002 Lugo Spain
- Institute of Aquaculture Universidade de Santiago de Compostela 15705 Santiago de Compostela Spain
| | - Francesco Maroso
- Department of Zoology, Genetics and Physical Anthropology. ACUIGEN group. Faculty of Veterinary Universidade de Santiago de Compostela. Campus of Lugo 27002 Lugo Spain
- Department of Life Sciences and Biotechnologies University of Ferrara via L. Borsari 46 44124 Ferrara Italy
| | - Sophie‐B. Wilmes
- School of Ocean Sciences Marine Centre Wales Bangor University Menai Bridge UK
| | - Miguel Hermida
- Department of Zoology, Genetics and Physical Anthropology. ACUIGEN group. Faculty of Veterinary Universidade de Santiago de Compostela. Campus of Lugo 27002 Lugo Spain
- Institute of Aquaculture Universidade de Santiago de Compostela 15705 Santiago de Compostela Spain
| | - Andrés Blanco
- Department of Zoology, Genetics and Physical Anthropology. ACUIGEN group. Faculty of Veterinary Universidade de Santiago de Compostela. Campus of Lugo 27002 Lugo Spain
| | - Carlos Fernández
- Department of Zoology, Genetics and Physical Anthropology. ACUIGEN group. Faculty of Veterinary Universidade de Santiago de Compostela. Campus of Lugo 27002 Lugo Spain
- Institute of Aquaculture Universidade de Santiago de Compostela 15705 Santiago de Compostela Spain
| | - Emily Groves
- School of Ocean Sciences Marine Centre Wales Bangor University Menai Bridge UK
| | - Shelagh K Malham
- School of Ocean Sciences Marine Centre Wales Bangor University Menai Bridge UK
| | - Carmen Bouza
- Department of Zoology, Genetics and Physical Anthropology. ACUIGEN group. Faculty of Veterinary Universidade de Santiago de Compostela. Campus of Lugo 27002 Lugo Spain
- Institute of Aquaculture Universidade de Santiago de Compostela 15705 Santiago de Compostela Spain
| | - Peter E. Robins
- School of Ocean Sciences Marine Centre Wales Bangor University Menai Bridge UK
| | - Paulino Martínez
- Department of Zoology, Genetics and Physical Anthropology. ACUIGEN group. Faculty of Veterinary Universidade de Santiago de Compostela. Campus of Lugo 27002 Lugo Spain
- Institute of Aquaculture Universidade de Santiago de Compostela 15705 Santiago de Compostela Spain
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19
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Didier G, Laurin M. Distributions of extinction times from fossil ages and tree topologies: the example of mid-Permian synapsid extinctions. PeerJ 2021; 9:e12577. [PMID: 34966586 PMCID: PMC8667717 DOI: 10.7717/peerj.12577] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/14/2021] [Accepted: 11/09/2021] [Indexed: 11/20/2022] Open
Abstract
Given a phylogenetic tree that includes only extinct, or a mix of extinct and extant taxa, where at least some fossil data are available, we present a method to compute the distribution of the extinction time of a given set of taxa under the Fossilized-Birth-Death model. Our approach differs from the previous ones in that it takes into account (i) the possibility that the taxa or the clade considered may diversify before going extinct and (ii) the whole phylogenetic tree to estimate extinction times, whilst previous methods do not consider the diversification process and deal with each branch independently. Because of this, our method can estimate extinction times of lineages represented by a single fossil, provided that they belong to a clade that includes other fossil occurrences. We assess and compare our new approach with a standard previous one using simulated data. Results show that our method provides more accurate confidence intervals. This new approach is applied to the study of the extinction time of three Permo-Carboniferous synapsid taxa (Ophiacodontidae, Edaphosauridae, and Sphenacodontidae) that are thought to have disappeared toward the end of the Cisuralian (early Permian), or possibly shortly thereafter. The timing of extinctions of these three taxa and of their component lineages supports the idea that the biological crisis in the late Kungurian/early Roadian consisted of a progressive decline in biodiversity throughout the Kungurian.
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Affiliation(s)
| | - Michel Laurin
- CNRS/MNHN/UPMC, Sorbonne Université, Muséum National d’Histoire Naturelle, CR2P (“Centre de Recherches sur la Paléobiodiversité et les Paléoenvironnements” UMR 7207), Paris, France
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20
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Zhang H, Zhang F, Chen JB, Erwin DH, Syverson DD, Ni P, Rampino M, Chi Z, Cai YF, Xiang L, Li WQ, Liu SA, Wang RC, Wang XD, Feng Z, Li HM, Zhang T, Cai HM, Zheng W, Cui Y, Zhu XK, Hou ZQ, Wu FY, Xu YG, Planavsky N, Shen SZ. Felsic volcanism as a factor driving the end-Permian mass extinction. SCIENCE ADVANCES 2021; 7:eabh1390. [PMID: 34788084 PMCID: PMC8597993 DOI: 10.1126/sciadv.abh1390] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 02/18/2021] [Accepted: 09/28/2021] [Indexed: 06/13/2023]
Abstract
The Siberian Traps large igneous province (STLIP) is commonly invoked as the primary driver of global environmental changes that triggered the end-Permian mass extinction (EPME). Here, we explore the contributions of coeval felsic volcanism to end-Permian environmental changes. We report evidence of extreme Cu enrichment in the EPME interval in South China. The enrichment is associated with an increase in the light Cu isotope, melt inclusions rich in copper and sulfides, and Hg concentration spikes. The Cu and Hg elemental and isotopic signatures can be linked to S-rich vapor produced by felsic volcanism. We use these previously unknown geochemical data to estimate volcanic SO2 injections and argue that this volcanism would have produced several degrees of rapid cooling before or coincident with the more protracted global warming. Large-scale eruptions near the South China block synchronous with the EPME strengthen the case that the STLIP may not have been the sole trigger.
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Affiliation(s)
- Hua Zhang
- LPS, Nanjing Institute of Geology and Palaeontology and Center for Excellence in Life and Paleoenvironment, Chinese Academy of Sciences, Nanjing 210008, China
| | - Feifei Zhang
- State Key Laboratory for Mineral Deposits Research, School of Earth Sciences and Engineering and Environment and Frontiers Science Center for Critical Earth Material Cycling, Nanjing University, Nanjing 210023, China
| | - Jiu-bin Chen
- Institute of Surface-Earth System Science, Tianjin University, 92 Weijin Road, Tianjin 300072, China
| | - Douglas H. Erwin
- Department of Paleobiology, MRC-121 National Museum of Natural History, P.O. Box 37012, Washington, DC 20013-7012, USA
- Santa Fe Institute, 1399 Hyde Park Road, Santa Fe, NM 87501, USA
| | - Drew D. Syverson
- Department of Earth and Planetary Sciences, Yale University, New Haven, CT 06511, USA
| | - Pei Ni
- State Key Laboratory for Mineral Deposits Research, School of Earth Sciences and Engineering and Environment and Frontiers Science Center for Critical Earth Material Cycling, Nanjing University, Nanjing 210023, China
| | - Michael Rampino
- Departments of Biology and Environmental Studies, New York University, New York, NY 10003, USA
| | - Zhe Chi
- State Key Laboratory for Mineral Deposits Research, School of Earth Sciences and Engineering and Environment and Frontiers Science Center for Critical Earth Material Cycling, Nanjing University, Nanjing 210023, China
| | - Yao-feng Cai
- LPS, Nanjing Institute of Geology and Palaeontology and Center for Excellence in Life and Paleoenvironment, Chinese Academy of Sciences, Nanjing 210008, China
| | - Lei Xiang
- LPS, Nanjing Institute of Geology and Palaeontology and Center for Excellence in Life and Paleoenvironment, Chinese Academy of Sciences, Nanjing 210008, China
| | - Wei-qiang Li
- State Key Laboratory for Mineral Deposits Research, School of Earth Sciences and Engineering and Environment and Frontiers Science Center for Critical Earth Material Cycling, Nanjing University, Nanjing 210023, China
| | - Sheng-Ao Liu
- State Key Laboratory of Geological Processes and Mineral Resources, China University of Geosciences, Beijing 100083, China
| | - Ru-cheng Wang
- State Key Laboratory for Mineral Deposits Research, School of Earth Sciences and Engineering and Environment and Frontiers Science Center for Critical Earth Material Cycling, Nanjing University, Nanjing 210023, China
| | - Xiang-dong Wang
- State Key Laboratory for Mineral Deposits Research, School of Earth Sciences and Engineering and Environment and Frontiers Science Center for Critical Earth Material Cycling, Nanjing University, Nanjing 210023, China
| | - Zhuo Feng
- Institute of Deep Time Terrestrial Ecology and Institute of Palaeontology, Yunnan University, Kunming 650500, China
| | - Hou-min Li
- Institute of Geology, Chinese Academy of Geological Sciences, Beijing 100037, China
| | - Ting Zhang
- Institute of Surface-Earth System Science, Tianjin University, 92 Weijin Road, Tianjin 300072, China
| | - Hong-ming Cai
- Institute of Surface-Earth System Science, Tianjin University, 92 Weijin Road, Tianjin 300072, China
| | - Wang Zheng
- Institute of Surface-Earth System Science, Tianjin University, 92 Weijin Road, Tianjin 300072, China
| | - Ying Cui
- Department of Earth and Environmental Studies, Montclair State University, Montclair, NJ 07043, USA
| | - Xiang-kun Zhu
- State Key Laboratory of Lithospheric Evolution, Institute of Geology and Geophysics, Chinese Academy of Sciences, Beijing 100029, China
| | - Zeng-qian Hou
- Institute of Geology, Chinese Academy of Geological Sciences, Beijing 100037, China
| | - Fu-yuan Wu
- State Key Laboratory of Lithospheric Evolution, Institute of Geology and Geophysics, Chinese Academy of Sciences, Beijing 100029, China
| | - Yi-gang Xu
- State Key Laboratory of Isotope Geochemistry and Center of Excellence in Deep Earth Science, Guangzhou Institute of Geochemistry, Chinese Academy of Sciences, Guangzhou 510640, China
| | - Noah Planavsky
- Department of Earth and Planetary Sciences, Yale University, New Haven, CT 06511, USA
| | - Shu-zhong Shen
- State Key Laboratory for Mineral Deposits Research, School of Earth Sciences and Engineering and Environment and Frontiers Science Center for Critical Earth Material Cycling, Nanjing University, Nanjing 210023, China
- State Key Laboratory of Isotope Geochemistry and Center of Excellence in Deep Earth Science, Guangzhou Institute of Geochemistry, Chinese Academy of Sciences, Guangzhou 510640, China
- Key Laboratory of Continental Collision and Plateau Uplift, Institute of Tibetan Plateau Research and Center for Excellence in Tibetan Plateau Earth Sciences, Chinese Academy of Sciences, Beijing 100101, China
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21
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Li C, Shen J, Zhang J, Lei P, Kong Y, Zhang J, Tang W, Chen T, Xiang X, Wang S, Zhang W, Zhong H. The silver linings of mercury: Reconsideration of its impacts on living organisms from a multi-timescale perspective. ENVIRONMENT INTERNATIONAL 2021; 155:106670. [PMID: 34090260 DOI: 10.1016/j.envint.2021.106670] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/16/2021] [Revised: 04/28/2021] [Accepted: 05/24/2021] [Indexed: 06/12/2023]
Abstract
Research on mercury (Hg), a naturally occurring element in Earth's lithosphere, has been extremely hot in the past few decades due to the outbreak of a series of disastrous poisoning incidents. However, such studies might provide us a biased view towards Hg if no thorough review about its long-term effects on living organisms from a multi-timescale perspective was performed. Hg might have played a mysterious role in critical intervals (e.g., mass extinction and oceanic anoxia events) in several geologic periods due to the elevated Hg levels induced by volcanism whereas it has long been used for various purposes in human history. Therefore, it is necessary to go through previous studies and historical records of different timescales (100 to 106 yr). In this work, we conducted a thorough review of Hg knowledge at three different timescales, i.e., geologic periods (106 yr), human history (103 yr), and contemporary history (100 yr), summarizing recent advances and indicated potential research gaps. By doing so, we demonstrated that it is possible to achieve safe and sustainable Hg applications despite the current Hg crisis. However, such silver linings depend on a better understanding of ecosystem dynamics. Besides, considering the possible dire consequences of erupted Hg levels as suggested in geological periods, swift actions to mitigate the impacts of anthropogenic activities on the Hg cycle will be another key point. Overall, this review presented a unique perspective of Hg combining different timescales, shedding light on the importance of a better understanding of the global ecosystem as a whole and maintaining the sustainability of planet Earth in the future.
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Affiliation(s)
- Chengjun Li
- Institute of Environmental Research at Greater Bay Area, Key Laboratory for Water Quality and Conservation of the Pearl River Delta, Ministry of Education, Guangzhou University, Guangzhou 510006, China
| | - Jun Shen
- State Key Laboratory of Geological Processes and Mineral Resources, China University of Geosciences, Wuhan, Hubei 430074, China
| | - Jin Zhang
- State Key Laboratory of Pollution Control and Resource Reuse, School of the Environment, Nanjing University, Nanjing 210023, China
| | - Pei Lei
- State Key Laboratory of Pollution Control and Resource Reuse, School of the Environment, Nanjing University, Nanjing 210023, China
| | - Yaqi Kong
- State Key Laboratory of Pollution Control and Resource Reuse, School of the Environment, Nanjing University, Nanjing 210023, China
| | - Jichao Zhang
- Institute of Environmental Research at Greater Bay Area, Key Laboratory for Water Quality and Conservation of the Pearl River Delta, Ministry of Education, Guangzhou University, Guangzhou 510006, China
| | - Wenli Tang
- State Key Laboratory of Pollution Control and Resource Reuse, School of the Environment, Nanjing University, Nanjing 210023, China
| | - Tianyu Chen
- School of Earth Sciences and Engineering, Nanjing University, Nanjing 210023, China
| | - Xin Xiang
- School of Information Management, Nanjing University, Nanjing 210023, China
| | - Shuxiao Wang
- State Key Joint Laboratory of Environmental Simulation and Pollution Control, School of Environment, Tsinghua University, Beijing 100084, China
| | - Wei Zhang
- Institute of Environmental Research at Greater Bay Area, Key Laboratory for Water Quality and Conservation of the Pearl River Delta, Ministry of Education, Guangzhou University, Guangzhou 510006, China.
| | - Huan Zhong
- State Key Laboratory of Pollution Control and Resource Reuse, School of the Environment, Nanjing University, Nanjing 210023, China; Environmental and Life Sciences Program (EnLS), Trent University, Peterborough, Ontario, Canada.
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22
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Massive and rapid predominantly volcanic CO 2 emission during the end-Permian mass extinction. Proc Natl Acad Sci U S A 2021; 118:2014701118. [PMID: 34493684 PMCID: PMC8449420 DOI: 10.1073/pnas.2014701118] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/29/2021] [Accepted: 07/21/2021] [Indexed: 11/18/2022] Open
Abstract
The end-Permian mass extinction event (∼252 Mya) is associated with one of the largest global carbon cycle perturbations in the Phanerozoic and is thought to be triggered by the Siberian Traps volcanism. Sizable carbon isotope excursions (CIEs) have been found at numerous sites around the world, suggesting massive quantities of 13C-depleted CO2 input into the ocean and atmosphere system. The exact magnitude and cause of the CIEs, the pace of CO2 emission, and the total quantity of CO2, however, remain poorly known. Here, we quantify the CO2 emission in an Earth system model based on new compound-specific carbon isotope records from the Finnmark Platform and an astronomically tuned age model. By quantitatively comparing the modeled surface ocean pH and boron isotope pH proxy, a massive (∼36,000 Gt C) and rapid emission (∼5 Gt C yr-1) of largely volcanic CO2 source (∼-15%) is necessary to drive the observed pattern of CIE, the abrupt decline in surface ocean pH, and the extreme global temperature increase. This suggests that the massive amount of greenhouse gases may have pushed the Earth system toward a critical tipping point, beyond which extreme changes in ocean pH and temperature led to irreversible mass extinction. The comparatively amplified CIE observed in higher plant leaf waxes suggests that the surface waters of the Finnmark Platform were likely out of equilibrium with the initial massive centennial-scale release of carbon from the massive Siberian Traps volcanism, supporting the rapidity of carbon injection. Our modeling work reveals that carbon emission pulses are accompanied by organic carbon burial, facilitated by widespread ocean anoxia.
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Six-fold increase of atmospheric pCO 2 during the Permian-Triassic mass extinction. Nat Commun 2021; 12:2137. [PMID: 33837195 PMCID: PMC8035180 DOI: 10.1038/s41467-021-22298-7] [Citation(s) in RCA: 24] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/04/2020] [Accepted: 02/26/2021] [Indexed: 11/15/2022] Open
Abstract
The Permian–Triassic mass extinction was marked by a massive release of carbon into the ocean-atmosphere system, evidenced by a sharp negative carbon isotope excursion. Large carbon emissions would have increased atmospheric pCO2 and caused global warming. However, the magnitude of pCO2 changes during the PTME has not yet been estimated. Here, we present a continuous pCO2 record across the PTME reconstructed from high-resolution δ13C of C3 plants from southwestern China. We show that pCO2 increased from 426 +133/−96 ppmv in the latest Permian to 2507 +4764/−1193 ppmv at the PTME within about 75 kyr, and that the reconstructed pCO2 significantly correlates with sea surface temperatures. Mass balance modelling suggests that volcanic CO2 is probably not the only trigger of the carbon cycle perturbation, and that large quantities of 13C-depleted carbon emission from organic matter and methane were likely required during complex interactions with the Siberian Traps volcanism. The Permian–Triassic mass extinction was accompanied by a massive release of carbon into the ocean-atmosphere system, but the magnitude of change is not well known. Here, the authors present a new record of C3 plants from southwestern China which shows that atmospheric pCO2 increased by a factor of six during this event.
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24
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Li M, Grasby SE, Wang SJ, Zhang X, Wasylenki LE, Xu Y, Sun M, Beauchamp B, Hu D, Shen Y. Nickel isotopes link Siberian Traps aerosol particles to the end-Permian mass extinction. Nat Commun 2021; 12:2024. [PMID: 33795666 PMCID: PMC8016954 DOI: 10.1038/s41467-021-22066-7] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/14/2020] [Accepted: 02/19/2021] [Indexed: 11/12/2022] Open
Abstract
The end-Permian mass extinction (EPME) was the most severe extinction event in the past 540 million years, and the Siberian Traps large igneous province (STLIP) is widely hypothesized to have been the primary trigger for the environmental catastrophe. The killing mechanisms depend critically on the nature of volatiles ejected during STLIP eruptions, initiating about 300 kyr before the extinction event, because the atmosphere is the primary interface between magmatism and extinction. Here we report Ni isotopes for Permian-Triassic sedimentary rocks from Arctic Canada. The δ60Ni data range from −1.09‰ to 0.35‰, and exhibit the lightest δ60Ni compositions ever reported for sedimentary rocks. Our results provide strong evidence for global dispersion and loading of Ni-rich aerosol particles into the Panthalassic Ocean. Our data demonstrate that environmental degradation had begun well before the extinction event and provide a link between global dispersion of Ni-rich aerosols, ocean chemistry changes, and the EPME. The end-Permian mass extinction was the most severe extinction event in the past 540 million years, and the Siberian Traps large igneous province is widely hypothesized to have been the primary trigger for the environmental catastrophe. In this study, Ni isotopes provide the link between Siberian Traps magmatism and early environmental degradation, ultimately leading to the end-Permian extinction.
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Affiliation(s)
- Menghan Li
- School of Earth and Space Sciences, University of Science and Technology of China, Hefei, China
| | - Stephen E Grasby
- Geological Survey of Canada, Natural Resources Canada, Calgary, Alberta, Canada.,Department of Geoscience, University of Calgary, Calgary, Alberta, Canada
| | - Shui-Jiong Wang
- State Key Laboratory of Geological Processes and Mineral Resources, China University of Geosciences, Beijing, China
| | - Xiaolin Zhang
- School of Earth and Space Sciences, University of Science and Technology of China, Hefei, China
| | - Laura E Wasylenki
- School of Earth & Sustainability, Northern Arizona University, Flagstaff, AZ, USA
| | - Yilun Xu
- School of Earth and Space Sciences, University of Science and Technology of China, Hefei, China
| | - Mingzhao Sun
- Department of Earth Sciences, ETH Zürich, Zürich, Switzerland
| | - Benoit Beauchamp
- Department of Geoscience, University of Calgary, Calgary, Alberta, Canada
| | - Dongping Hu
- School of Earth and Space Sciences, University of Science and Technology of China, Hefei, China
| | - Yanan Shen
- School of Earth and Space Sciences, University of Science and Technology of China, Hefei, China.
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25
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Botha J. The paleobiology and paleoecology of South African Lystrosaurus. PeerJ 2020; 8:e10408. [PMID: 33282563 PMCID: PMC7694564 DOI: 10.7717/peerj.10408] [Citation(s) in RCA: 16] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/08/2020] [Accepted: 11/02/2020] [Indexed: 12/20/2022] Open
Abstract
Lystrosaurus was one of the few tetrapods to survive the end-Permian mass extinction (EPME), the most catastrophic biotic crisis in Phanerozoic history. The significant increased abundance of this genus during the post-extinction Early Triassic recovery period has made Lystrosaurus an iconic survivor taxon globally and ideal for studying changes in growth dynamics during a mass extinction. There is potential evidence of a Lilliput effect in Lystrosaurus in South Africa as the two Triassic species that became highly abundant after the EPME are relatively smaller than the two Permian species. In order to test this hypothesis a detailed examination of the body size and life history of Permo-Triassic Lystrosaurus is required. In this study, the basal skull length and growth patterns of the four South African Lystrosaurus species from the Karoo Basin, L. maccaigi, L. curvatus, L. murrayi and L. declivis, were examined using cranial measurements and bone histology. The basal skull length measurements show that the Triassic species are smaller than the Permian species and supports previous studies. The osteohistology examination of all four species reveal rapidly forming fibrolamellar bone tissues during early to mid-ontogeny. Growth marks are common in L. maccaigi and L. curvatus, but rare and inconsistent in the purely Triassic L. murrayi and L. declivis. The inconsistency of the growth marks in these latter two taxa suggests the presence of developmental plasticity. This feature may have been advantageous in allowing these species to alter their growth patterns in response to environmental cues in the post-extinction Early Triassic climate. An overall transition to slower forming parallel-fibered bone is observed in the largest individuals of L. maccaigi, but absent from the limb bones of the other species. The absence of such bone tissue or outer circumferential lamellae in L. curvatus, L. murrayi and L. declivis indicates that even the largest collected specimens do not represent fully grown individuals. Although L. murrayi and L. declivis are smaller in size, the lack of a growth asymptote in the largest specimens indicates that adult individuals would have been notably larger and may have been similar in size to large L. maccaigi and L. curvatus when fully grown. Thus, the previously described Lilliput effect, recognized by some authors in the Karoo fossil record (such as the therocephalian Moschorhinus kitchingi), may be a product of high juvenile excess mortality in the Triassic rather than a strict "dwarfing" of Lystrosaurus species. The lifestyle of Lystrosaurus was also re-examined. Although previous studies have proposed an aquatic lifestyle for the genus, the similar morphology and bone microanatomy to several other large terrestrial Permo-Triassic dicynodonts supports a fully terrestrial mode of life.
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Affiliation(s)
- Jennifer Botha
- Department of Karoo Palaeontology, National Museum, Bloemfontein, Free State, South Africa.,Department of Zoology and Entomology, University of the Free State, Bloemfontein, Free State, South Africa
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26
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Livermore B, Dahl T, Bizzarro M, Connelly J. Uranium isotope compositions of biogenic carbonates - Implications for U uptake in shells and the application of the paleo-ocean oxygenation proxy. GEOCHIMICA ET COSMOCHIMICA ACTA 2020; 287:50-64. [PMID: 34354297 PMCID: PMC7611457 DOI: 10.1016/j.gca.2020.07.005] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/13/2023]
Abstract
The application of U isotopes in carbonates as a paleo-ocean oxygenation proxy is based on the critical assumption that the calcareous shell-building organisms incorporate U into their shells without fractionation relative to the U isotopic composition of ambient seawater. Recent studies claim a small, but resolvable, isotopic offset during abiotic and biogenic aragonite precipitation, whereas no isotope fractionation has been recorded during calcite precipitation. Although aragonite is meta-stable and not preserved over geological timescales (>1 Myr) and U precipitates during diagenesis, the U isotope composition of biogenic aragonite is important because aragonite precipitation is an important U sink to carbonate sediments. In contrast, low-magnesium calcite (LMC) is preserved over geological timescales and may provide a reliable fingerprint of ancient ocean chemistry. Therefore, a more general study is needed that compares U isotope compositions of primary marine biogenic carbonate precipitates. We report the U isotope compositions of 32 modern samples from geographically distinct localities in the Atlantic Ocean including corals (Scleractinia, Octocorallia), brachiopods (Articulata), molluscs (Tellina Listeri, Codahia Obicularis) and barnacles as well as one fossil mollusc. These samples reflect variable primary minerals, water temperatures, water depths, pH-values of ambient water, and U concentrations. Several seawater samples have also been measured to compare our methods with those of previously published studies. The analyzed modern corals and brachiopods display U isotopic compositions that are indistinguishable from modern seawater. This suggests that these carbonates have the potential to faithfully record the U isotopic composition of the surrounding seawater in which they form. The analyzed brachiopods are of particular interest as they are composed of the calcium carbonate polymorph LMC that is stable over geological timescales. While this study shows for the first time that LMC phases are robust targets in ancient samples, their low U abundance presents analytical challenges for precise U isotope analyses. We also show that two barnacle shells collected with ambient seawater have U isotopic compositions that are both lighter and heavier than the ambient seawater. The mechanism to explain this offset is not determined, but it demonstrates that at least barnacle shells are not representative of the seawater in which they last lived. Two of three partially fossilized mollusc shells also show resolvable offsets from seawater, likely indicating secondary processes that are known to shift or fractionate U isotopes. Collectively, our new data indicate that: 1) aragonite delivers U with a seawater composition to carbonate sediments, and 2) LMC shells of brachiopods that are stable over geological timescales may be more suitable for reconstructing the U isotope composition of ancient oceans.
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Affiliation(s)
- B.D. Livermore
- Centre for Star and Planet Formation, University of Copenhagen, DK-1350 Copenhagen K, Denmark
| | - T.W. Dahl
- GLOBE Institute, University of Copenhagen, DK-1350 Copenhagen K, Denmark
| | - M. Bizzarro
- Centre for Star and Planet Formation, University of Copenhagen, DK-1350 Copenhagen K, Denmark
- GLOBE Institute, University of Copenhagen, DK-1350 Copenhagen K, Denmark
| | - J.N. Connelly
- Centre for Star and Planet Formation, University of Copenhagen, DK-1350 Copenhagen K, Denmark
- GLOBE Institute, University of Copenhagen, DK-1350 Copenhagen K, Denmark
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27
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Coscia I, Wilmes SB, Ironside JE, Goward-Brown A, O'Dea E, Malham SK, McDevitt AD, Robins PE. Fine-scale seascape genomics of an exploited marine species, the common cockle Cerastoderma edule, using a multimodelling approach. Evol Appl 2020; 13:1854-1867. [PMID: 32908590 PMCID: PMC7463313 DOI: 10.1111/eva.12932] [Citation(s) in RCA: 19] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/02/2019] [Accepted: 01/21/2020] [Indexed: 12/11/2022] Open
Abstract
Population dynamics of marine species that are sessile as adults are driven by oceanographic dispersal of larvae from spawning to nursery grounds. This is mediated by life-history traits such as the timing and frequency of spawning, larval behaviour and duration, and settlement success. Here, we use 1725 single nucleotide polymorphisms (SNPs) to study the fine-scale spatial genetic structure in the commercially important cockle species Cerastoderma edule and compare it to environmental variables and current-mediated larval dispersal within a modelling framework. Hydrodynamic modelling employing the NEMO Atlantic Margin Model (AMM15) was used to simulate larval transport and estimate connectivity between populations during spawning months (April-September), factoring in larval duration and interannual variability of ocean currents. Results at neutral loci reveal the existence of three separate genetic clusters (mean F ST = 0.021) within a relatively fine spatial scale in the north-west Atlantic. Environmental association analysis indicates that oceanographic currents and geographic proximity explain over 20% of the variance observed at neutral loci, while genetic variance (71%) at outlier loci was explained by sea surface temperature extremes. These results fill an important knowledge gap in the management of a commercially important and overexploited species, bringing us closer to understanding the role of larval dispersal in connecting populations at a fine geographic scale.
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Affiliation(s)
- Ilaria Coscia
- Ecosystems and Environment Research Centre School of Science, Engineering and Environment University of Salford Salford UK
| | - Sophie B Wilmes
- School of Ocean Sciences Marine Centre Wales Bangor University Menai Bridge UK
| | - Joseph E Ironside
- Institute of Biological, Environmental and Rural Sciences Aberystwyth University, Penglais Aberystwyth UK
| | - Alice Goward-Brown
- School of Ocean Sciences Marine Centre Wales Bangor University Menai Bridge UK
| | | | - Shelagh K Malham
- School of Ocean Sciences Marine Centre Wales Bangor University Menai Bridge UK
| | - Allan D McDevitt
- Ecosystems and Environment Research Centre School of Science, Engineering and Environment University of Salford Salford UK
| | - Peter E Robins
- School of Ocean Sciences Marine Centre Wales Bangor University Menai Bridge UK
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28
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Linking Siberian Traps LIP Emplacement and End-Permian Mass Extinction: Evidence from Magnetic Stratigraphy of the Maymecha-Kotuy Volcanic Section. GEOSCIENCES 2020. [DOI: 10.3390/geosciences10080295] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/02/2023]
Abstract
The Siberian Traps Large Igneous Provinces (LIP) emplacement is considered as one of possible triggers for the end-Permian global biotic crisis. However, relative timing of the onset of extinction and the main phase of the magmatic activity are not yet accurately constrained. We present the detailed paleomagnetic data for the thickest composite section of the Siberian Traps volcanics, located in the Maymecha-Kotuy region. The major part of the Maymecha-Kotuy section erupted in the beginning of Early Triassic period and postdate came the onset of the biotic crisis. However, the initial pulse of volcanic activity in this region took place at the end of the Permian period, and likely preceded the extinction event, being nearly coeval to the lowest part of tuff-lava sequence of Norilsk. The suggested correlation scheme of volcanic sections from different regions of the Siberian platform shows that explosive and extrusive events foregoing the onset of extinction can be identified in almost all regions of the Siberian Traps LIP. Finally, we estimate the total duration of magmatic activity in the Maymecha-Kotuy region as ~2 Myr and assume that this lasted after the termination of eruptions in other parts of the Siberian platform.
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29
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Nicholson AC, Gulvik CA, Whitney AM, Humrighouse BW, Bell ME, Holmes B, Steigerwalt AG, Villarma A, Sheth M, Batra D, Rowe LA, Burroughs M, Pryor JC, Bernardet JF, Hugo C, Kämpfer P, Newman JD, McQuiston JR. Division of the genus Chryseobacterium: Observation of discontinuities in amino acid identity values, a possible consequence of major extinction events, guides transfer of nine species to the genus Epilithonimonas, eleven species to the genus Kaistella, and three species to the genus Halpernia gen. nov., with description of Kaistella daneshvariae sp. nov. and Epilithonimonas vandammei sp. nov. derived from clinical specimens. Int J Syst Evol Microbiol 2020; 70:4432-4450. [PMID: 32735208 PMCID: PMC7660247 DOI: 10.1099/ijsem.0.003935] [Citation(s) in RCA: 91] [Impact Index Per Article: 22.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/13/2019] [Revised: 10/28/2019] [Accepted: 12/02/2019] [Indexed: 01/10/2023] Open
Abstract
The genus Chryseobacterium in the family Weeksellaceae is known to be polyphyletic. Amino acid identity (AAI) values were calculated from whole-genome sequences of species of the genus Chryseobacterium, and their distribution was found to be multi-modal. These naturally-occurring non-continuities were leveraged to standardise genus assignment of these species. We speculate that this multi-modal distribution is a consequence of loss of biodiversity during major extinction events, leading to the concept that a bacterial genus corresponds to a set of species that diversified since the Permian extinction. Transfer of nine species (Chryseobacterium arachidiradicis, Chryseobacterium bovis, Chryseobacterium caeni, Chryseobacterium hispanicum, Chryseobacterium hominis, Chryseobacterium hungaricum,, Chryseobacterium pallidum and Chryseobacterium zeae) to the genus Epilithonimonas and eleven (Chryseobacterium anthropi, Chryseobacterium antarcticum, Chryseobacterium carnis, Chryseobacterium chaponense, Chryseobacterium haifense, Chryseobacterium jeonii, Chryseobacterium montanum, Chryseobacterium palustre, Chryseobacterium solincola, Chryseobacterium treverense and Chryseobacterium yonginense) to the genus Kaistella is proposed. Two novel species are described: Kaistella daneshvariae sp. nov. and Epilithonimonas vandammei sp. nov. Evidence is presented to support the assignment of Planobacterium taklimakanense to a genus apart from Chryseobacterium, to which Planobacterium salipaludis comb nov. also belongs. The novel genus Halpernia is proposed, to contain the type species Halpernia frigidisoli comb. nov., along with Halpernia humi comb. nov., and Halpernia marina comb. nov.
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Affiliation(s)
- Ainsley C. Nicholson
- Special Bacteriology Reference Laboratory, Bacterial Special Pathogens Branch, Division of High-Consequence Pathogens and Pathology, Centers for Disease Control and Prevention, Atlanta, Georgia 30333, USA
| | - Christopher A. Gulvik
- Special Bacteriology Reference Laboratory, Bacterial Special Pathogens Branch, Division of High-Consequence Pathogens and Pathology, Centers for Disease Control and Prevention, Atlanta, Georgia 30333, USA
| | - Anne M. Whitney
- Special Bacteriology Reference Laboratory, Bacterial Special Pathogens Branch, Division of High-Consequence Pathogens and Pathology, Centers for Disease Control and Prevention, Atlanta, Georgia 30333, USA
| | - Ben W. Humrighouse
- Special Bacteriology Reference Laboratory, Bacterial Special Pathogens Branch, Division of High-Consequence Pathogens and Pathology, Centers for Disease Control and Prevention, Atlanta, Georgia 30333, USA
| | - Melissa E. Bell
- Special Bacteriology Reference Laboratory, Bacterial Special Pathogens Branch, Division of High-Consequence Pathogens and Pathology, Centers for Disease Control and Prevention, Atlanta, Georgia 30333, USA
| | - Barry Holmes
- National Collection of Type Cultures, Health Protection Agency, Colindale, London NW9 5EQ, UK
| | - Arnie G. Steigerwalt
- Special Bacteriology Reference Laboratory, Bacterial Special Pathogens Branch, Division of High-Consequence Pathogens and Pathology, Centers for Disease Control and Prevention, Atlanta, Georgia 30333, USA
| | - Aaron Villarma
- Special Bacteriology Reference Laboratory, Bacterial Special Pathogens Branch, Division of High-Consequence Pathogens and Pathology, Centers for Disease Control and Prevention, Atlanta, Georgia 30333, USA
| | - Mili Sheth
- Division of Scientific Resources, Centers for Disease Control and Prevention, Atlanta, Georgia 30333, USA
| | - Dhwani Batra
- Division of Scientific Resources, Centers for Disease Control and Prevention, Atlanta, Georgia 30333, USA
| | - Lori A. Rowe
- Division of Scientific Resources, Centers for Disease Control and Prevention, Atlanta, Georgia 30333, USA
| | - Mark Burroughs
- Division of Scientific Resources, Centers for Disease Control and Prevention, Atlanta, Georgia 30333, USA
| | - Jessica C. Pryor
- Special Bacteriology Reference Laboratory, Bacterial Special Pathogens Branch, Division of High-Consequence Pathogens and Pathology, Centers for Disease Control and Prevention, Atlanta, Georgia 30333, USA
| | - Jean-François Bernardet
- Institut National de la Recherche Agronomique, Unité de Virologie et Immunologie Moléculaires, Domaine de Vilvert, Jouy-en-Josas, France
| | - Celia Hugo
- Department of Microbial, Biochemical and Food Biotechnology, University of the Free State, Bloemfontein, South Africa
| | - Peter Kämpfer
- Institut für Angewandte Mikrobiologie, Universität Giessen, Giessen, Germany
| | - Jeffrey D. Newman
- Department of Microbial, Biochemical and Food Biotechnology, University of the Free State, Bloemfontein, South Africa
- Biology Department, Lycoming College, Williamsport PA 17701, USA
| | - John R. McQuiston
- Special Bacteriology Reference Laboratory, Bacterial Special Pathogens Branch, Division of High-Consequence Pathogens and Pathology, Centers for Disease Control and Prevention, Atlanta, Georgia 30333, USA
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30
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Dal Corso J, Mills BJW, Chu D, Newton RJ, Mather TA, Shu W, Wu Y, Tong J, Wignall PB. Permo-Triassic boundary carbon and mercury cycling linked to terrestrial ecosystem collapse. Nat Commun 2020; 11:2962. [PMID: 32528009 PMCID: PMC7289894 DOI: 10.1038/s41467-020-16725-4] [Citation(s) in RCA: 30] [Impact Index Per Article: 7.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/23/2019] [Accepted: 05/18/2020] [Indexed: 11/09/2022] Open
Abstract
Records suggest that the Permo-Triassic mass extinction (PTME) involved one of the most severe terrestrial ecosystem collapses of the Phanerozoic. However, it has proved difficult to constrain the extent of the primary productivity loss on land, hindering our understanding of the effects on global biogeochemistry. We build a new biogeochemical model that couples the global Hg and C cycles to evaluate the distinct terrestrial contribution to atmosphere-ocean biogeochemistry separated from coeval volcanic fluxes. We show that the large short-lived Hg spike, and nadirs in δ202Hg and δ13C values at the marine PTME are best explained by a sudden, massive pulse of terrestrial biomass oxidation, while volcanism remains an adequate explanation for the longer-term geochemical changes. Our modelling shows that a massive collapse of terrestrial ecosystems linked to volcanism-driven environmental change triggered significant biogeochemical changes, and cascaded organic matter, nutrients, Hg and other organically-bound species into the marine system.
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Affiliation(s)
- Jacopo Dal Corso
- School of Earth and Environments, University of Leeds, Leeds, LS2 9JT, UK. .,State Key Laboratory of Biogeology and Environmental Geology, China University of Geosciences, Wuhan, 430074, China.
| | - Benjamin J W Mills
- School of Earth and Environments, University of Leeds, Leeds, LS2 9JT, UK.
| | - Daoliang Chu
- State Key Laboratory of Biogeology and Environmental Geology, China University of Geosciences, Wuhan, 430074, China
| | - Robert J Newton
- School of Earth and Environments, University of Leeds, Leeds, LS2 9JT, UK
| | - Tamsin A Mather
- Department of Earth Sciences, University of Oxford, South Parks Road, Oxford, OX1 3AN, UK
| | - Wenchao Shu
- State Key Laboratory of Biogeology and Environmental Geology, China University of Geosciences, Wuhan, 430074, China
| | - Yuyang Wu
- State Key Laboratory of Biogeology and Environmental Geology, China University of Geosciences, Wuhan, 430074, China
| | - Jinnan Tong
- State Key Laboratory of Biogeology and Environmental Geology, China University of Geosciences, Wuhan, 430074, China
| | - Paul B Wignall
- School of Earth and Environments, University of Leeds, Leeds, LS2 9JT, UK
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31
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Foster WJ, Heindel K, Richoz S, Gliwa J, Lehrmann DJ, Baud A, Kolar‐Jurkovšek T, Aljinović D, Jurkovšek B, Korn D, Martindale RC, Peckmann J. Suppressed competitive exclusion enabled the proliferation of Permian/Triassic boundary microbialites. THE DEPOSITIONAL RECORD : A JOURNAL OF BIOLOGICAL, PHYSICAL AND GEOCHEMICAL SEDIMENTARY PROCESSES 2020; 6:62-74. [PMID: 32140241 PMCID: PMC7043383 DOI: 10.1002/dep2.97] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 03/21/2019] [Revised: 09/02/2019] [Accepted: 10/01/2019] [Indexed: 06/10/2023]
Abstract
During the earliest Triassic microbial mats flourished in the photic zones of marginal seas, generating widespread microbialites. It has been suggested that anoxic conditions in shallow marine environments, linked to the end-Permian mass extinction, limited mat-inhibiting metazoans allowing for this microbialite expansion. The presence of a diverse suite of proxies indicating oxygenated shallow sea-water conditions (metazoan fossils, biomarkers and redox proxies) from microbialite successions have, however, challenged the inference of anoxic conditions. Here, the distribution and faunal composition of Griesbachian microbialites from China, Iran, Turkey, Armenia, Slovenia and Hungary are investigated to determine the factors that allowed microbialite-forming microbial mats to flourish following the end-Permian crisis. The results presented here show that Neotethyan microbial buildups record a unique faunal association due to the presence of keratose sponges, while the Palaeotethyan buildups have a higher proportion of molluscs and the foraminifera Earlandia. The distribution of the faunal components within the microbial fabrics suggests that, except for the keratose sponges and some microconchids, most of the metazoans were transported into the microbial framework via wave currents. The presence of both microbialites and metazoan associations were limited to oxygenated settings, suggesting that a factor other than anoxia resulted in a relaxation of ecological constraints following the mass extinction event. It is inferred that the end-Permian mass extinction event decreased the diversity and abundance of metazoans to the point of significantly reducing competition, allowing photosynthesis-based microbial mats to flourish in shallow water settings and resulting in the formation of widespread microbialites.
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Affiliation(s)
- William J. Foster
- Museum für NaturkundeLeibniz Institute for Research on Evolution and BiodiversityBerlinGermany
- Institute for Earth and Environmental SciencesUniversity of PotsdamPotsdam‐GolmGermany
- Jackson School of GeosciencesUniversity of Texas at AustinAustinTXUSA
| | - Katrin Heindel
- Department of Geodynamics and SedimentologyUniversity of ViennaViennaAustria
| | - Sylvain Richoz
- Department of GeologyLund UniversityLundSweden
- Institute of Earth SciencesGraz UniversityGrazAustria
| | - Jana Gliwa
- Museum für NaturkundeLeibniz Institute for Research on Evolution and BiodiversityBerlinGermany
| | | | - Aymon Baud
- Institute of Earth SciencesLausanne UniversityLausanneSwitzerland
| | | | - Dunja Aljinović
- Faculty of Mining, Geology and Petroleum EngineeringUniversity of ZagrebZagrebCroatia
| | | | - Dieter Korn
- Museum für NaturkundeLeibniz Institute for Research on Evolution and BiodiversityBerlinGermany
| | - Rowan C. Martindale
- Jackson School of GeosciencesUniversity of Texas at AustinAustinTXUSA
- Department of Geological SciencesUniversity of Texas at AustinAustinTXUSA
| | - Jörn Peckmann
- Institut für GeologieCentrum für Erdsystemforschung und NachhaltigkeitUniversität HamburgHamburgGermany
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32
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Fan JX, Shen SZ, Erwin DH, Sadler PM, MacLeod N, Cheng QM, Hou XD, Yang J, Wang XD, Wang Y, Zhang H, Chen X, Li GX, Zhang YC, Shi YK, Yuan DX, Chen Q, Zhang LN, Li C, Zhao YY. A high-resolution summary of Cambrian to Early Triassic marine invertebrate biodiversity. Science 2020; 367:272-277. [DOI: 10.1126/science.aax4953] [Citation(s) in RCA: 142] [Impact Index Per Article: 35.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/05/2019] [Accepted: 11/22/2019] [Indexed: 11/02/2022]
Abstract
One great challenge in understanding the history of life is resolving the influence of environmental change on biodiversity. Simulated annealing and genetic algorithms were used to synthesize data from 11,000 marine fossil species, collected from more than 3000 stratigraphic sections, to generate a new Cambrian to Triassic biodiversity curve with an imputed temporal resolution of 26 ± 14.9 thousand years. This increased resolution clarifies the timing of known diversification and extinction events. Comparative analysis suggests that partial pressure of carbon dioxide (Pco2) is the only environmental factor that seems to display a secular pattern similar to that of biodiversity, but this similarity was not confirmed when autocorrelation within that time series was analyzed by detrending. These results demonstrate that fossil data can provide the temporal and taxonomic resolutions necessary to test (paleo)biological hypotheses at a level of detail approaching those of long-term ecological analyses.
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Affiliation(s)
- Jun-xuan Fan
- School of Earth Sciences and Engineering, Nanjing University, Nanjing 210023, China
- LPS, Nanjing Institute of Geology and Palaeontology and Center for Excellence in Life and Paleoenvironment, Chinese Academy of Sciences, Nanjing 210008, China
| | - Shu-zhong Shen
- School of Earth Sciences and Engineering, Nanjing University, Nanjing 210023, China
- LPS, Nanjing Institute of Geology and Palaeontology and Center for Excellence in Life and Paleoenvironment, Chinese Academy of Sciences, Nanjing 210008, China
- Key Laboratory of Continental Collision and Plateau Uplift, Institute of Tibetan Plateau Research and Center for Excellence in Tibetan Plateau Earth Sciences, Chinese Academy of Sciences, Beijing 100101, China
| | - Douglas H. Erwin
- Department of Paleobiology, National Museum of Natural History, Washington, DC 20013, USA
- Santa Fe Institute, Santa Fe, NM 87501, USA
| | - Peter M. Sadler
- Department of Earth Sciences, University of California, Riverside, CA 92521, USA
| | - Norman MacLeod
- School of Earth Sciences and Engineering, Nanjing University, Nanjing 210023, China
| | - Qiu-ming Cheng
- School of the Earth Sciences and Resources, China University of Geosciences, Beijing 100083, China
| | - Xu-dong Hou
- School of Earth Sciences and Engineering, Nanjing University, Nanjing 210023, China
| | - Jiao Yang
- School of Earth Sciences and Engineering, Nanjing University, Nanjing 210023, China
| | - Xiang-dong Wang
- School of Earth Sciences and Engineering, Nanjing University, Nanjing 210023, China
| | - Yue Wang
- LPS, Nanjing Institute of Geology and Palaeontology and Center for Excellence in Life and Paleoenvironment, Chinese Academy of Sciences, Nanjing 210008, China
| | - Hua Zhang
- LPS, Nanjing Institute of Geology and Palaeontology and Center for Excellence in Life and Paleoenvironment, Chinese Academy of Sciences, Nanjing 210008, China
| | - Xu Chen
- LPS, Nanjing Institute of Geology and Palaeontology and Center for Excellence in Life and Paleoenvironment, Chinese Academy of Sciences, Nanjing 210008, China
| | - Guo-xiang Li
- LPS, Nanjing Institute of Geology and Palaeontology and Center for Excellence in Life and Paleoenvironment, Chinese Academy of Sciences, Nanjing 210008, China
| | - Yi-chun Zhang
- LPS, Nanjing Institute of Geology and Palaeontology and Center for Excellence in Life and Paleoenvironment, Chinese Academy of Sciences, Nanjing 210008, China
| | - Yu-kun Shi
- School of Earth Sciences and Engineering, Nanjing University, Nanjing 210023, China
| | - Dong-xun Yuan
- LPS, Nanjing Institute of Geology and Palaeontology and Center for Excellence in Life and Paleoenvironment, Chinese Academy of Sciences, Nanjing 210008, China
| | - Qing Chen
- LPS, Nanjing Institute of Geology and Palaeontology and Center for Excellence in Life and Paleoenvironment, Chinese Academy of Sciences, Nanjing 210008, China
| | - Lin-na Zhang
- LPS, Nanjing Institute of Geology and Palaeontology and Center for Excellence in Life and Paleoenvironment, Chinese Academy of Sciences, Nanjing 210008, China
| | - Chao Li
- LPS, Nanjing Institute of Geology and Palaeontology and Center for Excellence in Life and Paleoenvironment, Chinese Academy of Sciences, Nanjing 210008, China
| | - Ying-ying Zhao
- School of Earth Sciences and Engineering, Nanjing University, Nanjing 210023, China
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33
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Complex marine bioturbation ecosystem engineering behaviors persisted in the wake of the end-Permian mass extinction. Sci Rep 2020; 10:203. [PMID: 31937801 PMCID: PMC6959249 DOI: 10.1038/s41598-019-56740-0] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/17/2019] [Accepted: 12/04/2019] [Indexed: 11/08/2022] Open
Abstract
The end-Permian mass extinction was the most severe mass extinction event of the Phanerozoic and was followed by a several million-year delay in benthic ecosystem recovery. While much work has been done to understand biotic recovery in both the body and trace fossil records of the Early Triassic, almost no focus has previously been given to analyzing patterns in ecosystem engineering complexity as a result of the extinction drivers. Bioturbation is a key ecosystem engineering behavior in marine environments, as it results in changes to resource flows and the physical environment. Thus, the trace fossil record can be used to examine the effect of the end-Permian mass extinction on bioturbating ecosystem engineers. We present a dataset compiled from previously published literature to analyze burrowing ecosystem engineering behaviors through the Permian-Triassic boundary. We report two key observations: first, that there is no loss in bioturbation ecosystem engineering behaviors after the mass extinction, and second, that these persisting behaviors include deep tier, high-impact, complex ecosystem engineering. These findings suggest that while environmental conditions may have limited deeper burrowing, complex ecosystem engineering behaviors were able to persist in the Early Triassic. Furthermore, the persistence of deep tier bioirrigated three-dimensional network burrows implies that benthic biogeochemical cycling could have been maintained at pre-extinction states in some local environments, stimulating ecosystem productivity and promoting biotic recovery in the Early Triassic.
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34
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Abstract
Viruses are diverse parasites of cells and extremely abundant. They might have arisen during an early phase of the evolution of life on Earth dominated by ribonucleic acid or RNA-like macromolecules, or when a cellular world was already well established. The theories of the origin of life on Earth shed light on the possible origin of primitive viruses or virus-like genetic elements in our biosphere. Some features of present-day viruses, notably error-prone replication, might be a consequence of the selective forces that mediated their ancestral origin. Two views on the role of viruses in our biosphere predominate; viruses considered as opportunistic, selfish elements, and viruses considered as active participants in the construction of the cellular world via the lateral transfer of genes. These two models have a bearing on viruses being considered predominantly as disease agents or predominantly as cooperators in the shaping of differentiated cellular organisms.
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35
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Augland LE, Ryabov VV, Vernikovsky VA, Planke S, Polozov AG, Callegaro S, Jerram DA, Svensen HH. The main pulse of the Siberian Traps expanded in size and composition. Sci Rep 2019; 9:18723. [PMID: 31822688 PMCID: PMC6904769 DOI: 10.1038/s41598-019-54023-2] [Citation(s) in RCA: 29] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/01/2019] [Accepted: 11/04/2019] [Indexed: 11/09/2022] Open
Abstract
Emplacement of large volumes of (sub)volcanic rocks during the main pulse of the Siberian Traps occurred within <1 m.y., coinciding with the end-Permian mass extinction. Volcanics from outside the main Siberian Traps, e.g. Taimyr and West Siberia, have since long been correlated, but existing geochronological data cannot resolve at a precision better than ~5 m.y. whether (sub)volcanic activity in these areas actually occurred during the main pulse or later. We report the first high precision U-Pb zircon geochronology from two alkaline ultramafic-felsic layered intrusive complexes from Taimyr, showing synchronicity between these and the main Siberian Traps (sub)volcanic pulse, and the presence of a second Dinerian-Smithian pulse. This is the first documentation of felsic intrusive magmatism occurring during the main pulse, testifying to the Siberian Trap's compositional diversity. Furthermore, the intrusions cut basal basalts of the Taimyr lava stratigraphy hence providing a minimum age of these basalts of 251.64 ± 0.11 Ma. Synchronicity of (sub)volcanic activity between Taimyr and the Siberian Traps imply that the total area of the Siberian Traps main pulse should include a ~300 000 km2 area north of Norilsk. The vast aerial extent of the (sub)volcanic activity during the Siberian Traps main pulse may explain the severe environmental consequences.
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Affiliation(s)
- L E Augland
- Centre for Earth Evolution and Dynamics (CEED), University of Oslo, Oslo, Norway.
| | - V V Ryabov
- Sobolev Institute of Geology and Mineralogy Siberian Branch Russian Academy of Sciences, Novosibirsk, Russia
| | - V A Vernikovsky
- Novosibirsk State University, Novosibirsk, Russia.,Trofimuk Institute of Petroleum Geology and Geophysics Siberian Branch Russian Academy of Sciences, Novosibirsk, Russia
| | - S Planke
- Centre for Earth Evolution and Dynamics (CEED), University of Oslo, Oslo, Norway.,Volcanic Basin Petroleum Research (VBPR), Oslo Innovation Center, Oslo, Norway
| | - A G Polozov
- Institute of Geology of Ore Deposits, Petrography, Mineralogy and Geochemistry, Russian Academy of Sciences (IGEM RAS), Novosibirsk, Russia
| | - S Callegaro
- Centre for Earth Evolution and Dynamics (CEED), University of Oslo, Oslo, Norway
| | - D A Jerram
- Centre for Earth Evolution and Dynamics (CEED), University of Oslo, Oslo, Norway.,DougalEARTH Ltd, Solihull, UK
| | - H H Svensen
- Centre for Earth Evolution and Dynamics (CEED), University of Oslo, Oslo, Norway
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36
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Marshall CR. Using the Fossil Record to Evaluate Timetree Timescales. Front Genet 2019; 10:1049. [PMID: 31803226 PMCID: PMC6871265 DOI: 10.3389/fgene.2019.01049] [Citation(s) in RCA: 33] [Impact Index Per Article: 6.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/20/2019] [Accepted: 09/30/2019] [Indexed: 12/11/2022] Open
Abstract
The fossil and geologic records provide the primary data used to established absolute timescales for timetrees. For the paleontological evaluation of proposed timetree timescales, and for node-based methods for constructing timetrees, the fossil record is used to bracket divergence times. Minimum brackets (minimum ages) can be established robustly using well-dated fossils that can be reliably assigned to lineages based on positive morphological evidence. Maximum brackets are much harder to establish, largely because it is difficult to establish definitive evidence that the absence of a taxon in the fossil record is real and not just due to the incompleteness of the fossil and rock records. Five primary methods have been developed to estimate maximum age brackets, each of which is discussed. The fact that the fossilization potential of a group typically decreases the closer one approaches its time of origin increases the challenge of estimating maximum age brackets. Additional complications arise: 1) because fossil data actually bracket the time of origin of the first relevant fossilizable morphology (apomorphy), not the divergence time itself; 2) due to the phylogenetic uncertainty in the placement of fossils; 3) because of idiosyncratic temporal and geographic gaps in the rock and fossil records; and 4) if the preservation potential of a group changed significantly during its history. In contrast, uncertainties in the absolute ages of fossils are typically relatively unimportant, even though the vast majority of fossil cannot be dated directly. These issues and relevant quantitative methods are reviewed, and their relative magnitudes assessed, which typically correlate with the age of the group, its geographic range, and species richness.
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Affiliation(s)
- Charles R. Marshall
- Department of Integrative Biology, University of California, Berkeley, Berkeley, CA, United States
- University of California Museum of Paleontology, University of California, Berkeley, Berkeley, CA, United States
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37
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Thompson JR, Posenato R, Bottjer DJ, Petsios E. Echinoids from the Tesero Member (Werfen Formation) of the Dolomites (Italy): implications for extinction and survival of echinoids in the aftermath of the end-Permian mass extinction. PeerJ 2019; 7:e7361. [PMID: 31531267 PMCID: PMC6718154 DOI: 10.7717/peerj.7361] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/17/2019] [Accepted: 06/27/2019] [Indexed: 12/02/2022] Open
Abstract
The end-Permian mass extinction (∼252 Ma) was responsible for high rates of extinction and evolutionary bottlenecks in a number of animal groups. Echinoids, or sea urchins, were no exception, and the Permian to Triassic represents one of the most significant intervals of time in their macroevolutionary history. The extinction event was responsible for significant turnover, with the Permian–Triassic representing the transition from stem group echinoid-dominated faunas in the Palaeozoic to Mesozoic faunas dominated by crown group echinoids. This turnover is well-known, however, the environmental and taxonomic distribution of echinoids during the latest Permian and Early Triassic is not. Here we report on an echinoid fauna from the Tesero Member, Werfen Formation (latest Permian to Early Triassic) of the Dolomites (northern Italy). The fauna is largely known from disarticulated ossicles, but consists of both stem group taxa, and a new species of crown group echinoid, Eotiaris teseroensis n. sp. That these stem group echinoids were present in the Tesero Member indicates that stem group echinoids did not go extinct in the Dolomites coincident with the onset of extinction, further supporting other recent work indicating that stem group echinoids survived the end-Permian extinction. Furthermore, the presence of Eotiaris across a number of differing palaeoenvironments in the Early Triassic may have had implications for the survival of cidaroid echinoids during the extinction event.
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Affiliation(s)
- Jeffrey R Thompson
- Department of Genetics, Evolution and Environment, University College London, University of London, London, United Kingdom.,Department of Earth Sciences, University of Southern California, Los Angeles, CA, United States of America.,Department of Geosciences, Baylor University, Waco, TX, United States of America
| | - Renato Posenato
- Dipartimento di Fisica e Scienze della Terra, Università di Ferrara, Ferrara, Italy
| | - David J Bottjer
- Department of Earth Sciences, University of Southern California, Los Angeles, CA, United States of America
| | - Elizabeth Petsios
- Department of Geosciences, Baylor University, Waco, TX, United States of America
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38
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Rossoni AW, Weber APM. Systems Biology of Cold Adaptation in the Polyextremophilic Red Alga Galdieria sulphuraria. Front Microbiol 2019; 10:927. [PMID: 31118926 PMCID: PMC6504705 DOI: 10.3389/fmicb.2019.00927] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/02/2019] [Accepted: 04/12/2019] [Indexed: 12/30/2022] Open
Abstract
Rapid fluctuation of environmental conditions can impose severe stress upon living organisms. Surviving such episodes of stress requires a rapid acclimation response, e.g., by transcriptional and post-transcriptional mechanisms. Persistent change of the environmental context, however, requires longer-term adaptation at the genetic level. Fast-growing unicellular aquatic eukaryotes enable analysis of adaptive responses at the genetic level in a laboratory setting. In this study, we applied continuous cold stress (28°C) to the thermoacidophile red alga G. sulphuraria, which is 14°C below its optimal growth temperature of 42°C. Cold stress was applied for more than 100 generations to identify components that are critical for conferring thermal adaptation. After cold exposure for more than 100 generations, the cold-adapted samples grew ∼30% faster than the starting population. Whole-genome sequencing revealed 757 variants located on 429 genes (6.1% of the transcriptome) encoding molecular functions involved in cell cycle regulation, gene regulation, signaling, morphogenesis, microtubule nucleation, and transmembrane transport. CpG islands located in the intergenic region accumulated a significant number of variants, which is likely a sign of epigenetic remodeling. We present 20 candidate genes and three putative cis-regulatory elements with various functions most affected by temperature. Our work shows that natural selection toward temperature tolerance is a complex systems biology problem that involves gradual reprogramming of an intricate gene network and deeply nested regulators.
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Affiliation(s)
| | - Andreas P. M. Weber
- Cluster of Excellence on Plant Sciences (CEPLAS), Institute of Plant Biochemistry, Heinrich Heine University Düsseldorf, Düsseldorf, Germany
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39
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Shen J, Chen J, Algeo TJ, Yuan S, Feng Q, Yu J, Zhou L, O'Connell B, Planavsky NJ. Evidence for a prolonged Permian-Triassic extinction interval from global marine mercury records. Nat Commun 2019; 10:1563. [PMID: 30952859 PMCID: PMC6450928 DOI: 10.1038/s41467-019-09620-0] [Citation(s) in RCA: 95] [Impact Index Per Article: 19.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/31/2018] [Accepted: 03/19/2019] [Indexed: 11/10/2022] Open
Abstract
The latest Permian mass extinction, the most devastating biocrisis of the Phanerozoic, has been widely attributed to eruptions of the Siberian Traps Large Igneous Province, although evidence of a direct link has been scant to date. Here, we measure mercury (Hg), assumed to reflect shifts in volcanic activity, across the Permian-Triassic boundary in ten marine sections across the Northern Hemisphere. Hg concentration peaks close to the Permian-Triassic boundary suggest coupling of biotic extinction and increased volcanic activity. Additionally, Hg isotopic data for a subset of these sections provide evidence for largely atmospheric rather than terrestrial Hg sources, further linking Hg enrichment to increased volcanic activity. Hg peaks in shallow-water sections were nearly synchronous with the end-Permian extinction horizon, while those in deep-water sections occurred tens of thousands of years before the main extinction, possibly supporting a globally diachronous biotic turnover and protracted mass extinction event.
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Affiliation(s)
- Jun Shen
- State Key Laboratory of Geological Processes and Mineral Resources, China University of Geosciences, 430074, Wuhan, Hubei, China. .,Department of Geology and Geophysics, Yale University, New Haven, CT, 06520-8109, USA.
| | - Jiubin Chen
- State Key Laboratory of Environmental Geochemistry, Institute of Geochemistry, Chinese Academy of Sciences, Guiyang, 550002, China.,Institute of Surface-Earth System Science, Tianjin University, 92 Weijin Road, 300072, Nankai, Tianjin, China
| | - Thomas J Algeo
- State Key Laboratory of Geological Processes and Mineral Resources, China University of Geosciences, 430074, Wuhan, Hubei, China.,State Key Laboratory of Biogeology and Environmental Geology, China University of Geosciences, 430074, Wuhan, Hubei, China.,Department of Geology, University of Cincinnati, Cincinnati, OH, 45221-0013, USA
| | - Shengliu Yuan
- State Key Laboratory of Environmental Geochemistry, Institute of Geochemistry, Chinese Academy of Sciences, Guiyang, 550002, China
| | - Qinglai Feng
- State Key Laboratory of Geological Processes and Mineral Resources, China University of Geosciences, 430074, Wuhan, Hubei, China
| | - Jianxin Yu
- State Key Laboratory of Biogeology and Environmental Geology, China University of Geosciences, 430074, Wuhan, Hubei, China
| | - Lian Zhou
- State Key Laboratory of Geological Processes and Mineral Resources, China University of Geosciences, 430074, Wuhan, Hubei, China
| | - Brennan O'Connell
- Department of Geology and Geophysics, Yale University, New Haven, CT, 06520-8109, USA
| | - Noah J Planavsky
- Department of Geology and Geophysics, Yale University, New Haven, CT, 06520-8109, USA
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40
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Affiliation(s)
- Seth Burgess
- U.S. Geological Survey, Menlo Park, CA 94025, USA.
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41
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42
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Schoene B, Eddy MP, Samperton KM, Keller CB, Keller G, Adatte T, Khadri SFR. U-Pb constraints on pulsed eruption of the Deccan Traps across the end-Cretaceous mass extinction. Science 2019; 363:862-866. [PMID: 30792300 DOI: 10.1126/science.aau2422] [Citation(s) in RCA: 46] [Impact Index Per Article: 9.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/27/2018] [Accepted: 01/08/2019] [Indexed: 11/02/2022]
Abstract
Temporal correlation between some continental flood basalt eruptions and mass extinctions has been proposed to indicate causality, with eruptive volatile release driving environmental degradation and extinction. We tested this model for the Deccan Traps flood basalt province, which, along with the Chicxulub bolide impact, is implicated in the Cretaceous-Paleogene (K-Pg) extinction approximately 66 million years ago. We estimated Deccan eruption rates with uranium-lead (U-Pb) zircon geochronology and resolved four high-volume eruptive periods. According to this model, maximum eruption rates occurred before and after the K-Pg extinction, with one such pulse initiating tens of thousands of years prior to both the bolide impact and extinction. These findings support extinction models that incorporate both catastrophic events as drivers of environmental deterioration associated with the K-Pg extinction and its aftermath.
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Affiliation(s)
- Blair Schoene
- Department of Geosciences, Princeton University, Princeton, NJ, USA.
| | - Michael P Eddy
- Department of Geosciences, Princeton University, Princeton, NJ, USA
| | - Kyle M Samperton
- Nuclear and Chemical Sciences Division, Lawrence Livermore National Laboratory, Livermore, CA, USA
| | | | - Gerta Keller
- Department of Geosciences, Princeton University, Princeton, NJ, USA
| | - Thierry Adatte
- ISTE, Institut des Sciences de la Terre, Université de Lausanne, GEOPOLIS, Lausanne, Switzerland
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43
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Fielding CR, Frank TD, McLoughlin S, Vajda V, Mays C, Tevyaw AP, Winguth A, Winguth C, Nicoll RS, Bocking M, Crowley JL. Age and pattern of the southern high-latitude continental end-Permian extinction constrained by multiproxy analysis. Nat Commun 2019; 10:385. [PMID: 30674880 PMCID: PMC6344581 DOI: 10.1038/s41467-018-07934-z] [Citation(s) in RCA: 22] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/12/2018] [Accepted: 12/05/2018] [Indexed: 11/09/2022] Open
Abstract
Past studies of the end-Permian extinction (EPE), the largest biotic crisis of the Phanerozoic, have not resolved the timing of events in southern high-latitudes. Here we use palynology coupled with high-precision CA-ID-TIMS dating of euhedral zircons from continental sequences of the Sydney Basin, Australia, to show that the collapse of the austral Permian Glossopteris flora occurred prior to 252.3 Ma (~370 kyrs before the main marine extinction). Weathering proxies indicate that floristic changes occurred during a brief climate perturbation in a regional alluvial landscape that otherwise experienced insubstantial change in fluvial style, insignificant reorganization of the depositional surface, and no abrupt aridification. Palaeoclimate modelling suggests a moderate shift to warmer summer temperatures and amplified seasonality in temperature across the EPE, and warmer and wetter conditions for all seasons into the Early Triassic. The terrestrial EPE and a succeeding peak in Ni concentration in the Sydney Basin correlate, respectively, to the onset of the primary extrusive and intrusive phases of the Siberian Traps Large Igneous Province.
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Affiliation(s)
- Christopher R Fielding
- Department of Earth & Atmospheric Sciences, University of Nebraska-Lincoln, 126 Bessey Hall, Lincoln, NE, 68588-0340, USA.
| | - Tracy D Frank
- Department of Earth & Atmospheric Sciences, University of Nebraska-Lincoln, 126 Bessey Hall, Lincoln, NE, 68588-0340, USA
| | - Stephen McLoughlin
- Swedish Museum of Natural History, Box 50007, S-104 05, Stockholm, Sweden
| | - Vivi Vajda
- Swedish Museum of Natural History, Box 50007, S-104 05, Stockholm, Sweden
| | - Chris Mays
- Swedish Museum of Natural History, Box 50007, S-104 05, Stockholm, Sweden
| | - Allen P Tevyaw
- Department of Earth & Atmospheric Sciences, University of Nebraska-Lincoln, 126 Bessey Hall, Lincoln, NE, 68588-0340, USA
| | - Arne Winguth
- Department of Earth & Environmental Sciences, University of Texas at Arlington, PO Box 19049, Arlington, TX, 76019, USA
| | - Cornelia Winguth
- Department of Earth & Environmental Sciences, University of Texas at Arlington, PO Box 19049, Arlington, TX, 76019, USA
| | - Robert S Nicoll
- Geoscience Australia, GPO Box 378, Canberra, ACT, 2601, Australia
| | - Malcolm Bocking
- Bocking Associates, 8 Tahlee Close, Castle Hill, NSW, 2154, Australia
| | - James L Crowley
- Isotope Geology Laboratory, Boise State University, 1910 University Drive, Boise, ID, 83725-1535, USA
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44
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Penn JL, Deutsch C, Payne JL, Sperling EA. Temperature-dependent hypoxia explains biogeography and severity of end-Permian marine mass extinction. Science 2018; 362:362/6419/eaat1327. [DOI: 10.1126/science.aat1327] [Citation(s) in RCA: 137] [Impact Index Per Article: 22.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/30/2018] [Accepted: 10/19/2018] [Indexed: 01/21/2023]
Affiliation(s)
- Justin L. Penn
- School of Oceanography, University of Washington, Seattle, WA 98195, USA
| | - Curtis Deutsch
- School of Oceanography, University of Washington, Seattle, WA 98195, USA
- Department of Biology, University of Washington, Seattle, WA 98195, USA
| | - Jonathan L. Payne
- Department of Geological Sciences, Stanford University, Stanford, CA 94305, USA
| | - Erik A. Sperling
- Department of Geological Sciences, Stanford University, Stanford, CA 94305, USA
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45
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Abstract
The end of the Permian Period was catastrophic for life in high-latitude regions
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Affiliation(s)
- Lee Kump
- Department of Geosciences, College of Earth and Mineral Sciences, The Pennsylvania State University, University Park, PA 16802, USA.
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46
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Feng Z, Wei H, Guo Y, Bomfleur B. A conifer-dominated Early Triassic flora from Southwest China. Sci Bull (Beijing) 2018; 63:1462-1463. [PMID: 36658826 DOI: 10.1016/j.scib.2018.09.011] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/11/2018] [Revised: 08/28/2018] [Accepted: 08/29/2018] [Indexed: 01/21/2023]
Affiliation(s)
- Zhuo Feng
- Institute of Deep Time Terrestrial Ecology, Yunnan University, Kunming 650500, China; Research Center for Earth System Science, Yunnan University, Kunming 650500, China; Institute of Karst Geology, Chinese Academy of Geological Sciences, Guilin 541004, China.
| | - Haibo Wei
- Institute of Deep Time Terrestrial Ecology, Yunnan University, Kunming 650500, China
| | - Yun Guo
- Institute of Deep Time Terrestrial Ecology, Yunnan University, Kunming 650500, China
| | - Benjamin Bomfleur
- Forschungsstelle für Paläobotanik, Westfälische Wilhelms-Universität, Heisenbergstraße 2, Münster D-48149, Germany
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47
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Darroch SAF, Smith EF, Laflamme M, Erwin DH. Ediacaran Extinction and Cambrian Explosion. Trends Ecol Evol 2018; 33:653-663. [PMID: 30007844 DOI: 10.1016/j.tree.2018.06.003] [Citation(s) in RCA: 38] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/06/2018] [Revised: 06/04/2018] [Accepted: 06/12/2018] [Indexed: 11/25/2022]
Abstract
The Ediacaran-Cambrian (E-C) transition marks the most important geobiological revolution of the past billion years, including the Earth's first crisis of macroscopic eukaryotic life, and its most spectacular evolutionary diversification. Here, we describe competing models for late Ediacaran extinction, summarize evidence for these models, and outline key questions which will drive research on this interval. We argue that the paleontological data suggest two pulses of extinction - one at the White Sea-Nama transition, which ushers in a recognizably metazoan fauna (the 'Wormworld'), and a second pulse at the E-C boundary itself. We argue that this latest Ediacaran fauna has more in common with the Cambrian than the earlier Ediacaran, and thus may represent the earliest phase of the Cambrian Explosion.
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Affiliation(s)
| | - Emily F Smith
- Johns Hopkins University, Baltimore, MD 21218-2683, USA
| | - Marc Laflamme
- University of Toronto Mississauga, Mississauga, ON L5L 1C6, Canada
| | - Douglas H Erwin
- Smithsonian Institution, PO Box 37012, MRC 121, Washington, DC 20013-7012, USA
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Precisely dating the Frasnian-Famennian boundary: implications for the cause of the Late Devonian mass extinction. Sci Rep 2018; 8:9578. [PMID: 29934550 PMCID: PMC6014997 DOI: 10.1038/s41598-018-27847-7] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/12/2018] [Accepted: 06/12/2018] [Indexed: 11/09/2022] Open
Abstract
The Frasnian–Famennian boundary records one of the most catastrophic mass extinctions of the Phanerozoic Eon. Several possible causes for this extinction have been suggested, including extra-terrestrial impacts and large-scale volcanism. However, linking the extinction with these potential causes is hindered by the lack of precise dating of either the extinction or volcanic/impact events. In this study, a bentonite layer in uppermost-Frasnian sediments from Steinbruch Schmidt (Germany) is re-analysed using CA-ID-TIMS U-Pb zircon geochronology in order to constrain the date of the Frasnian–Famennian extinction. A new age of 372.36 ± 0.053 Ma is determined for this bentonite, confirming a date no older than 372.4 Ma for the Frasnian–Famennian boundary, which can be further constrained to 371.93–371.78 Ma using a pre-existing Late Devonian age model. This age is consistent with previous dates, but is significantly more precise. When compared with published ages of the Siljan impact crater and basalts produced by large-scale volcanism, there is no apparent correlation between the extinction and either phenomenon, not clearly supporting them as a direct cause for the Frasnian–Famennian event. This result highlights an urgent need for further Late Devonian geochronological and chemostratigraphic work to better understand the cause(s) of this extinction.
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Zhang F, Romaniello SJ, Algeo TJ, Lau KV, Clapham ME, Richoz S, Herrmann AD, Smith H, Horacek M, Anbar AD. Multiple episodes of extensive marine anoxia linked to global warming and continental weathering following the latest Permian mass extinction. SCIENCE ADVANCES 2018; 4:e1602921. [PMID: 29651454 PMCID: PMC5895439 DOI: 10.1126/sciadv.1602921] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/22/2016] [Accepted: 02/26/2018] [Indexed: 05/07/2023]
Abstract
Explaining the ~5-million-year delay in marine biotic recovery following the latest Permian mass extinction, the largest biotic crisis of the Phanerozoic, is a fundamental challenge for both geological and biological sciences. Ocean redox perturbations may have played a critical role in this delayed recovery. However, the lack of quantitative constraints on the details of Early Triassic oceanic anoxia (for example, time, duration, and extent) leaves the links between oceanic conditions and the delayed biotic recovery ambiguous. We report high-resolution U-isotope (δ238U) data from carbonates of the uppermost Permian to lowermost Middle Triassic Zal section (Iran) to characterize the timing and global extent of ocean redox variation during the Early Triassic. Our δ238U record reveals multiple negative shifts during the Early Triassic. Isotope mass-balance modeling suggests that the global area of anoxic seafloor expanded substantially in the Early Triassic, peaking during the latest Permian to mid-Griesbachian, the late Griesbachian to mid-Dienerian, the Smithian-Spathian transition, and the Early/Middle Triassic transition. Comparisons of the U-, C-, and Sr-isotope records with a modeled seawater PO43- concentration curve for the Early Triassic suggest that elevated marine productivity and enhanced oceanic stratification were likely the immediate causes of expanded oceanic anoxia. The patterns of redox variation documented by the U-isotope record show a good first-order correspondence to peaks in ammonoid extinctions during the Early Triassic. Our results indicate that multiple oscillations in oceanic anoxia modulated the recovery of marine ecosystems following the latest Permian mass extinction.
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Affiliation(s)
- Feifei Zhang
- School of Earth and Space Exploration, Arizona State University, Tempe, AZ 85287–6004, USA
- Corresponding author.
| | - Stephen J. Romaniello
- School of Earth and Space Exploration, Arizona State University, Tempe, AZ 85287–6004, USA
| | - Thomas J. Algeo
- Department of Geology, University of Cincinnati, Cincinnati, OH 45221–0013, USA
- State Key Laboratories of Biogeology and Environmental Geology and Geological Processes and Mineral Resources, China University of Geosciences, Wuhan 430074, China
| | - Kimberly V. Lau
- Deparment of Earth Sciences, University of California, Riverside, Riverside, CA 92521, USA
| | - Matthew E. Clapham
- Department of Earth and Planetary Sciences, University of California, Santa Cruz, Santa Cruz, CA 95064, USA
| | - Sylvain Richoz
- Institute of Earth Sciences, NAWI Graz, University of Graz, Heinrichstraße 26, 8010 Graz, Austria
- Department of Geology, Lund University, Sölvegatan 12, 22362 Lund, Sweden
| | - Achim D. Herrmann
- Department of Geology and Geophysics, Louisiana State University, Baton Rouge, LA 70803, USA
| | - Harrison Smith
- School of Earth and Space Exploration, Arizona State University, Tempe, AZ 85287–6004, USA
| | - Micha Horacek
- Institute of Earth Sciences, NAWI Graz, University of Graz, Heinrichstraße 26, 8010 Graz, Austria
- Lehr- und Forschungszentrum Francisco-Josephinum, 3250 Wieselburg, Austria
- Department of Lithospheric Research, Vienna University, Althanstr. 14, 1090 Vienna, Austria
| | - Ariel D. Anbar
- School of Earth and Space Exploration, Arizona State University, Tempe, AZ 85287–6004, USA
- School of Molecular Sciences, Arizona State University, Tempe, AZ, 85287, USA
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Rapid enhancement of chemical weathering recorded by extremely light seawater lithium isotopes at the Permian-Triassic boundary. Proc Natl Acad Sci U S A 2018; 115:3782-3787. [PMID: 29581278 PMCID: PMC5899431 DOI: 10.1073/pnas.1711862115] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
Abstract
Estimates of seawater Li isotopic composition at the Permian–Triassic boundary (PTB) reveal extremely light seawater Li isotopic signatures accompanying the most severe mass extinction in the history of animal life. Theoretical modeling indicates a rapid enhancement of continental weathering during this time, which was likely triggered by the eruption of the Siberian Traps, rapid global warming, and acid rains. Our results provide independent geochemical evidence for an enhanced continental chemical weathering at the PTB, illustrating that continental weathering may provide a key link between terrestrial and marine ecological crises. Lithium (Li) isotope analyses of sedimentary rocks from the Meishan section in South China reveal extremely light seawater Li isotopic signatures at the Permian–Triassic boundary (PTB), which coincide with the most severe mass extinction in the history of animal life. Using a dynamic seawater lithium box model, we show that the light seawater Li isotopic signatures can be best explained by a significant influx of riverine [Li] with light δ7Li to the ocean realm. The seawater Li isotope excursion started ≥300 Ky before and persisted up to the main extinction event, which is consistent with the eruption time of the Siberian Traps. The eruption of the Siberian Traps exposed an enormous amount of fresh basalt and triggered CO2 release, rapid global warming, and acid rains, which in turn led to a rapid enhancement of continental weathering. The enhanced continental weathering delivered excessive nutrients to the oceans that could lead to marine eutrophication, anoxia, acidification, and ecological perturbation, ultimately resulting in the end-Permian mass extinction.
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