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Chacko AN, Miller ADC, Dhanabalan KM, Mukherjee A. Exploring the potential of water channels for developing genetically encoded reporters and biosensors for diffusion-weighted MRI. JOURNAL OF MAGNETIC RESONANCE (SAN DIEGO, CALIF. : 1997) 2024; 365:107743. [PMID: 39053029 DOI: 10.1016/j.jmr.2024.107743] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/30/2023] [Revised: 07/02/2024] [Accepted: 07/17/2024] [Indexed: 07/27/2024]
Abstract
Genetically encoded reporters for magnetic resonance imaging (MRI) offer a valuable technology for making molecular-scale measurements of biological processes within living organisms with high anatomical resolution and whole-organ coverage without relying on ionizing radiation. However, most MRI reporters rely on synthetic contrast agents, typically paramagnetic metals and metal complexes, which often need to be supplemented exogenously to create optimal contrast. To eliminate the need for synthetic contrast agents, we previously introduced aquaporin-1, a mammalian water channel, as a new reporter gene for the fully autonomous detection of genetically labeled cells using diffusion-weighted MRI. In this study, we aimed to expand the toolbox of diffusion-based genetic reporters by modulating aquaporin membrane trafficking and harnessing the evolutionary diversity of water channels across species. We identified a number of new water channels that functioned as diffusion-weighted reporter genes. In addition, we show that loss-of-function variants of yeast and human aquaporins can be leveraged to design first-in-class diffusion-based sensors for detecting the activity of a model protease within living cells.
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Affiliation(s)
- Asish N Chacko
- Department of Chemistry, University of California, Santa Barbara, CA 93106-5080, USA
| | - Austin D C Miller
- Biomolecular Science and Engineering Graduate Program, University of California, Santa Barbara, CA 93106-5080, USA
| | - Kaamini M Dhanabalan
- Department of Chemical Engineering, University of California, Santa Barbara, CA 93106-5080, USA
| | - Arnab Mukherjee
- Department of Chemistry, University of California, Santa Barbara, CA 93106-5080, USA; Biomolecular Science and Engineering Graduate Program, University of California, Santa Barbara, CA 93106-5080, USA; Department of Chemical Engineering, University of California, Santa Barbara, CA 93106-5080, USA; Department of Bioengineering, University of California, Santa Barbara, CA 93106-5080, USA.
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2
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Chacko AN, Miller AD, Dhanabalan KM, Mukherjee A. Exploring the potential of water channels for developing MRI reporters and sensors without the need for exogenous contrast agents. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2024.01.21.576580. [PMID: 38328035 PMCID: PMC10849501 DOI: 10.1101/2024.01.21.576580] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/09/2024]
Abstract
Genetically encoded reporters for magnetic resonance imaging (MRI) offer a valuable technology for making molecular-scale measurements of biological processes within living organisms with high anatomical resolution and whole-organ coverage without relying on ionizing radiation. However, most MRI reporters rely on contrast agents, typically paramagnetic metals and metal complexes, which often need to be supplemented exogenously to create optimal contrast. To eliminate the need for contrast agents, we previously introduced aquaporin-1, a mammalian water channel, as a new reporter gene for the fully autonomous detection of genetically labeled cells using diffusion-weighted MRI. In this study, we aimed to expand the toolbox of diffusion-based genetic reporters by modulating aquaporin membrane trafficking and harnessing the evolutionary diversity of water channels across species. We identified a number of new water channels that functioned as diffusion-weighted reporter genes. In addition, we show that loss-of-function variants of yeast and human aquaporins can be leveraged to design first-in-class diffusion-based sensors for detecting the activity of a model protease within living cells.
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Affiliation(s)
| | | | | | - Arnab Mukherjee
- Department of Chemistry
- Biomolecular Science and Engineering Graduate Program
- Department of Chemical Engineering
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3
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Živanović BD, Ullrich K, Spasić SZ, Galland P. Auxin- and pH-induced guttation in Phycomyces sporangiophores: relation between guttation and diminished elongation growth. PROTOPLASMA 2023; 260:1109-1133. [PMID: 36622433 DOI: 10.1007/s00709-022-01833-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/04/2022] [Accepted: 12/22/2022] [Indexed: 06/07/2023]
Abstract
Guttation, the formation of exudation water, is widespread among plants and fungi, yet the underlying mechanisms remain largely unknown. We describe the conditions for inducing guttation in sporangiophores of the mucoracean fungus, Phycomyces blakesleeanus. Cultivation on peptone-enriched potato dextrose agar elicits vigorous guttation mainly below the apical growing zone, while sporangiophores raised on a glucose-mineral medium manifest only moderate guttation. Mycelia do not guttate irrespective of the employed media. The topology of guttation droplets allows identifying the non-growing part of the sporangiophore as a guttation zone, which responds to humidity and medium composition in ways that become relevant for turgor homeostasis and thus the sensor physiology of the growing zone. Apparently, the entire sporangiophore, rather than exclusively the growing zone, participates in signal reception and integration to generate a common growth output. Exogenous auxin applied to the growing zones elicits two correlated responses: (i) formation of guttation droplets in the growing and transition zones below the sporangium and (ii) a diminution of the growth rate. In sporangiophore populations, guttation-induction by exogenous control buffer occurs at low frequencies; the bias for guttation increases with increasing auxin concentration. Synthetic auxins and the transport inhibitor NPA suppress guttation completely, but leave growth rates largely unaffected. Mutants C2 carA and C148 carA madC display higher sensitivities for auxin-induced guttation compared to wild type. A working model for guttation includes aquaporins and mechanosensitive ion channels that we identified in Phycomyces by sequence domain searches.
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Affiliation(s)
- Branka D Živanović
- Institute for Multidisciplinary Research, University of Belgrade, Kneza Višeslava 1, 11030, Belgrade, Serbia.
| | - Kristian Ullrich
- Max Planck Institute for Evolutionary Biology, Department of Evolutionary Biology, August Thienemann Str. 2, 24306, Plön, Germany
| | - Sladjana Z Spasić
- Institute for Multidisciplinary Research, University of Belgrade, Kneza Višeslava 1, 11030, Belgrade, Serbia
- Singidunum University, Danijelova 32, 11010, Belgrade, Serbia
| | - Paul Galland
- Faculty of Biology, Philipps-University Marburg, Karl-Von-Frisch Str. 8, 35032, Marburg, Germany
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4
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Gössweiner-Mohr N, Siligan C, Pluhackova K, Umlandt L, Koefler S, Trajkovska N, Horner A. The Hidden Intricacies of Aquaporins: Remarkable Details in a Common Structural Scaffold. SMALL (WEINHEIM AN DER BERGSTRASSE, GERMANY) 2022; 18:e2202056. [PMID: 35802902 DOI: 10.1002/smll.202202056] [Citation(s) in RCA: 8] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/01/2022] [Revised: 06/09/2022] [Indexed: 06/15/2023]
Abstract
Evolution turned aquaporins (AQPs) into the most efficient facilitators of passive water flow through cell membranes at no expense of solute discrimination. In spite of a plethora of solved AQP structures, many structural details remain hidden. Here, by combining extensive sequence- and structural-based analysis of a unique set of 20 non-redundant high-resolution structures and molecular dynamics simulations of four representatives, key aspects of AQP stability, gating, selectivity, pore geometry, and oligomerization, with a potential impact on channel functionality, are identified. The general view of AQPs possessing a continuous open water pore is challenged and it is depicted that AQPs' selectivity is not exclusively shaped by pore-lining residues but also by the relative arrangement of transmembrane helices. Moreover, this analysis reveals that hydrophobic interactions constitute the main determinant of protein thermal stability. Finally, a numbering scheme of the conserved AQP scaffold is established, facilitating direct comparison of, for example, disease-causing mutations and prediction of potential structural consequences. Additionally, the results pave the way for the design of optimized AQP water channels to be utilized in biotechnological applications.
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Affiliation(s)
| | - Christine Siligan
- Institute of Biophysics, Johannes Kepler University Linz, Gruberstr. 40, Linz, 4020, Austria
| | - Kristyna Pluhackova
- Stuttgart Center for Simulation Science, University of Stuttgart, Cluster of Excellence EXC 2075, Universitätsstr. 32, 70569, Stuttgart, Germany
| | - Linnea Umlandt
- Institute of Biophysics, Johannes Kepler University Linz, Gruberstr. 40, Linz, 4020, Austria
| | - Sabina Koefler
- Institute of Biophysics, Johannes Kepler University Linz, Gruberstr. 40, Linz, 4020, Austria
| | - Natasha Trajkovska
- Institute of Biophysics, Johannes Kepler University Linz, Gruberstr. 40, Linz, 4020, Austria
| | - Andreas Horner
- Institute of Biophysics, Johannes Kepler University Linz, Gruberstr. 40, Linz, 4020, Austria
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5
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Jacob V, Choat B, Churchill AC, Zhang H, Barton CVM, Krishnananthaselvan A, Post AK, Power SA, Medlyn BE, Tissue DT. High safety margins to drought-induced hydraulic failure found in five pasture grasses. PLANT, CELL & ENVIRONMENT 2022; 45:1631-1646. [PMID: 35319101 DOI: 10.1111/pce.14318] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/12/2021] [Revised: 02/13/2022] [Accepted: 03/16/2022] [Indexed: 06/14/2023]
Abstract
Determining the relationship between reductions in stomatal conductance (gs ) and leaf water transport during dehydration is key to understanding plant drought responses. While numerous studies have analysed the hydraulic function of woody species, minimal research has been conducted on grasses. Here, we sought to characterize hydraulic vulnerability in five widely-occurring pasture grasses (including both C3 and C4 grasses) and determine whether reductions in gs and leaf hydraulic conductance (Kleaf ) during dehydration could be attributed to xylem embolism. Using the optical vulnerability (OV) technique, we found that all species were highly resistant to xylem embolism when compared to other herbaceous angiosperms, with 50% xylem embolism (PX50 ) occurring at xylem pressures ranging from -4.4 to -6.1 MPa. We observed similar reductions in gs and Kleaf under mild water stress for all species, occurring well before PX50 . The onset of xylem embolism (PX12 ) occurred consistently after stomatal closure and 90% reduction of Kleaf . Our results suggest that factors other than xylem embolism are responsible for the majority of reductions in gs and Kleaf during drought and reductions in the productivity of pasture species under moderate drought may not be driven by embolism.
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Affiliation(s)
- Vinod Jacob
- Western Sydney University, Penrith, New South Wales, Australia
| | - Brendan Choat
- Western Sydney University, Penrith, New South Wales, Australia
| | | | - Haiyang Zhang
- Western Sydney University, Penrith, New South Wales, Australia
| | | | | | - Alison K Post
- Department of Biology, Colorado State University, Fort Collins, Colorado, USA
| | - Sally A Power
- Western Sydney University, Penrith, New South Wales, Australia
| | | | - David T Tissue
- Western Sydney University, Penrith, New South Wales, Australia
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6
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Salinity Tolerance of Halophytic Grass Puccinellia nuttalliana Is Associated with Enhancement of Aquaporin-Mediated Water Transport by Sodium. Int J Mol Sci 2022; 23:ijms23105732. [PMID: 35628537 PMCID: PMC9145133 DOI: 10.3390/ijms23105732] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/02/2022] [Revised: 05/10/2022] [Accepted: 05/17/2022] [Indexed: 02/05/2023] Open
Abstract
In salt-sensitive plants, root hydraulic conductivity is severely inhibited by NaCl, rapidly leading to the loss of water balance. However, halophytic plants appear to effectively control plant water flow under salinity conditions. In this study, we tested the hypothesis that Na+ is the principal salt factor responsible for the enhancement of aquaporin-mediated water transport in the roots of halophytic grasses, and this enhancement plays a significant role in the maintenance of water balance, gas exchange, and the growth of halophytic plants exposed to salinity. We examined the effects of treatments with 150 mM of NaCl, KCl, and Na2SO4 to separate the factors that affect water relations and, consequently, physiological and growth responses in three related grass species varying in salt tolerance. The grasses included relatively salt-sensitive Poa pratensis, moderately salt-tolerant Poa juncifolia, and the salt-loving halophytic grass Puccinellia nuttalliana. Our study demonstrated that sustained growth, chlorophyll concentrations, gas exchange, and water transport in Puccinellia nuttalliana were associated with the presence of Na in the applied salt treatments. Contrary to the other examined grasses, the root cell hydraulic conductivity in Puccinellia nuttalliana was enhanced by the 150 mM NaCl and 150 mM Na2SO4 treatments. This enhancement was abolished by the 50 µM HgCl2 treatment, demonstrating that Na was the factor responsible for the increase in mercury-sensitive, aquaporin-mediated water transport. The observed increases in root Ca and K concentrations likely played a role in the transcriptional and (or) posttranslational regulation of aquaporins that enhanced root water transport capacity in Puccinellia nuttalliana. The study demonstrates that Na plays a key role in the aquaporin-mediated root water transport of the halophytic grass Puccinellia nuttalliana, contributing to its salinity tolerance.
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7
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Barber A, Müller C. Drought and Subsequent Soil Flooding Affect the Growth and Metabolism of Savoy Cabbage. Int J Mol Sci 2021; 22:ijms222413307. [PMID: 34948111 PMCID: PMC8705109 DOI: 10.3390/ijms222413307] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/19/2021] [Revised: 12/07/2021] [Accepted: 12/09/2021] [Indexed: 11/16/2022] Open
Abstract
An important factor of current climate change is water availability, with both droughts and flooding becoming more frequent. Effects of individual stresses on plant traits are well studied, although less is known about the impacts of sequences of different stresses. We used savoy cabbage to study the consequences of control conditions (well-watered) versus continuous drought versus drought followed by soil flooding and a potential recovery phase on shoot growth and leaf metabolism. Under continuous drought, plants produced less than half of the shoot biomass compared to controls, but had a >20% higher water use efficiency. In the soil flooding treatment, plants exhibited the poorest growth performance, particularly after the "recovery" phase. The carbon-to-nitrogen ratio was at least twice as high, whereas amino acid concentrations were lowest in leaves of controls compared to stressed plants. Some glucosinolates, characteristic metabolites of Brassicales, showed lower concentrations, especially in plants of the flooding treatment. Stress-specific investment into different amino acids, many of them acting as osmolytes, as well as glucosinolates, indicate that these metabolites play distinct roles in the responses of plants to different water availability conditions. To reduce losses in crop production, we need to understand plant responses to dynamic climate change scenarios.
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8
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Scochera F, Zerbetto De Palma G, Canessa Fortuna A, Chevriau J, Toriano R, Soto G, Zeida A, Alleva K. PIP aquaporin pH sensing is regulated by the length and charge of the C-terminal region. FEBS J 2021; 289:246-261. [PMID: 34293244 DOI: 10.1111/febs.16134] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/19/2021] [Revised: 07/01/2021] [Accepted: 07/21/2021] [Indexed: 11/27/2022]
Abstract
Plant PIP aquaporins play a central role in controlling plant water status. The current structural model for PIP pH-gating states that the main pH sensor is located in loopD and that all the mobile cytosolic elements participate in a complex interaction network that ensures the closed structure. However, the precise participation of the last part of the C-terminal domain (CT) in PIP pH gating remains unknown. This last part has not been resolved in PIP crystal structures and is a key difference between PIP1 and PIP2 paralogues. Here, by a combined experimental and computational approach, we provide data about the role of CT in pH gating of Beta vulgaris PIP. We demonstrate that the length of CT and the positive charge located among its last residues modulate the pH at which the open/closed transition occurs. We also postulate a molecular-based mechanism for the differential pH sensing in PIP homo- or heterotetramers by performing atomistic molecular dynamics simulations (MDS) on complete models of PIP tetramers. Our findings show that the last part of CT can affect the environment of loopD pH sensors in the closed state. Results presented herein contribute to the understanding of how the characteristics of CT in PIP channels play a crucial role in determining the pH at which water transport through these channels is blocked, highlighting the relevance of the differentially conserved very last residues in PIP1 and PIP2 paralogues.
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Affiliation(s)
- Florencia Scochera
- Facultad de Farmacia y Bioquímica, Departamento de Fisicomatemática, Universidad de Buenos Aires, Argentina
| | - Gerardo Zerbetto De Palma
- Facultad de Farmacia y Bioquímica, Departamento de Fisicomatemática, Universidad de Buenos Aires, Argentina.,Instituto de Química y Fisicoquímica Biológica (IQUIFIB), Facultad de Farmacia y Bioquímica, CONICET, Universidad de Buenos Aires, Argentina.,Instituto de Biotecnología, Universidad Nacional de Hurlingham, Villa Tesei, Argentina
| | - Agustina Canessa Fortuna
- Facultad de Farmacia y Bioquímica, Departamento de Fisicomatemática, Universidad de Buenos Aires, Argentina
| | - Jonathan Chevriau
- Instituto de Química y Fisicoquímica Biológica (IQUIFIB), Facultad de Farmacia y Bioquímica, CONICET, Universidad de Buenos Aires, Argentina
| | - Roxana Toriano
- Facultad de Medicina, CONICET, Instituto de Fisiología y Biofísica "Bernardo Houssay" (IFIBIO "Houssay"), Universidad de Buenos Aires, Argentina
| | - Gabriela Soto
- Instituto de Agrobiotecnología y Biología Molecular (INTA-CONICET), Buenos Aires, Argentina.,Instituto de Genética (INTA), Buenos Aires, Argentina
| | - Ari Zeida
- Departamento de Bioquímica and Centro de Investigaciones Biomédicas (Ceinbio), Facultad de Medicina, Universidad de la República, Montevideo, Uruguay
| | - Karina Alleva
- Facultad de Farmacia y Bioquímica, Departamento de Fisicomatemática, Universidad de Buenos Aires, Argentina.,Instituto de Química y Fisicoquímica Biológica (IQUIFIB), Facultad de Farmacia y Bioquímica, CONICET, Universidad de Buenos Aires, Argentina
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9
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Abstract
Our brains consist of 80% water, which is continuously shifted between different compartments and cell types during physiological and pathophysiological processes. Disturbances in brain water homeostasis occur with pathologies such as brain oedema and hydrocephalus, in which fluid accumulation leads to elevated intracranial pressure. Targeted pharmacological treatments do not exist for these conditions owing to our incomplete understanding of the molecular mechanisms governing brain water transport. Historically, the transmembrane movement of brain water was assumed to occur as passive movement of water along the osmotic gradient, greatly accelerated by water channels termed aquaporins. Although aquaporins govern the majority of fluid handling in the kidney, they do not suffice to explain the overall brain water movement: either they are not present in the membranes across which water flows or they appear not to be required for the observed flow of water. Notably, brain fluid can be secreted against an osmotic gradient, suggesting that conventional osmotic water flow may not describe all transmembrane fluid transport in the brain. The cotransport of water is an unconventional molecular mechanism that is introduced in this Review as a missing link to bridge the gap in our understanding of cellular and barrier brain water transport.
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Affiliation(s)
- Nanna MacAulay
- Department of Neuroscience, Faculty of Health and Medical Sciences, University of Copenhagen, Copenhagen, Denmark.
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10
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Grunwald Y, Wigoda N, Sade N, Yaaran A, Torne T, Gosa SC, Moran N, Moshelion M. Arabidopsis leaf hydraulic conductance is regulated by xylem sap pH, controlled, in turn, by a P-type H + -ATPase of vascular bundle sheath cells. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2021; 106:301-313. [PMID: 33735498 DOI: 10.1111/tpj.15235] [Citation(s) in RCA: 17] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/28/2020] [Revised: 03/06/2021] [Accepted: 03/09/2021] [Indexed: 05/28/2023]
Abstract
The leaf vascular bundle sheath cells (BSCs) that tightly envelop the leaf veins, are a selective and dynamic barrier to xylem sap water and solutes radially entering the mesophyll cells. Under normal conditions, xylem sap pH below 6 is presumably important for driving and regulating the transmembranal solute transport. Having discovered recently a differentially high expression of a BSC proton pump, AHA2, we now test the hypothesis that it regulates the xylem sap pH and leaf radial water fluxes. We monitored the xylem sap pH in the veins of detached leaves of wild-type Arabidopsis, AHA mutants and aha2 mutants complemented with AHA2 gene solely in BSCs. We tested an AHA inhibitor (vanadate) and stimulator (fusicoccin), and different pH buffers. We monitored their impact on the xylem sap pH and the leaf hydraulic conductance (Kleaf ), and the effect of pH on the water osmotic permeability (Pf ) of isolated BSCs protoplasts. We found that AHA2 is necessary for xylem sap acidification, and in turn, for elevating Kleaf . Conversely, AHA2 knockdown, which alkalinized the xylem sap, or, buffering its pH to 7.5, reduced Kleaf , and elevating external pH to 7.5 decreased the BSCs Pf . All these showed a causative link between AHA2 activity in BSCs and leaf radial hydraulic water conductance.
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Affiliation(s)
- Yael Grunwald
- The R.H. Smith Institute of Plant Sciences and Genetics in Agriculture, The R.H. Smith Faculty of Agriculture, Food and Environment, The Hebrew University of Jerusalem, Rehovot, 76100, Israel
| | - Noa Wigoda
- The R.H. Smith Institute of Plant Sciences and Genetics in Agriculture, The R.H. Smith Faculty of Agriculture, Food and Environment, The Hebrew University of Jerusalem, Rehovot, 76100, Israel
| | - Nir Sade
- The R.H. Smith Institute of Plant Sciences and Genetics in Agriculture, The R.H. Smith Faculty of Agriculture, Food and Environment, The Hebrew University of Jerusalem, Rehovot, 76100, Israel
- School of Plant Sciences and Food Security, The George S. Wise Faculty of Life Sciences at Tel-Aviv University, Tel Aviv, 6997801, Israel
| | - Adi Yaaran
- The R.H. Smith Institute of Plant Sciences and Genetics in Agriculture, The R.H. Smith Faculty of Agriculture, Food and Environment, The Hebrew University of Jerusalem, Rehovot, 76100, Israel
| | - Tanmayee Torne
- The R.H. Smith Institute of Plant Sciences and Genetics in Agriculture, The R.H. Smith Faculty of Agriculture, Food and Environment, The Hebrew University of Jerusalem, Rehovot, 76100, Israel
| | - Sanbon Chaka Gosa
- The R.H. Smith Institute of Plant Sciences and Genetics in Agriculture, The R.H. Smith Faculty of Agriculture, Food and Environment, The Hebrew University of Jerusalem, Rehovot, 76100, Israel
| | - Nava Moran
- The R.H. Smith Institute of Plant Sciences and Genetics in Agriculture, The R.H. Smith Faculty of Agriculture, Food and Environment, The Hebrew University of Jerusalem, Rehovot, 76100, Israel
| | - Menachem Moshelion
- The R.H. Smith Institute of Plant Sciences and Genetics in Agriculture, The R.H. Smith Faculty of Agriculture, Food and Environment, The Hebrew University of Jerusalem, Rehovot, 76100, Israel
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11
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Kamal MM, Ishikawa S, Takahashi F, Suzuki K, Kamo M, Umezawa T, Shinozaki K, Kawamura Y, Uemura M. Large-Scale Phosphoproteomic Study of Arabidopsis Membrane Proteins Reveals Early Signaling Events in Response to Cold. Int J Mol Sci 2020; 21:E8631. [PMID: 33207747 PMCID: PMC7696906 DOI: 10.3390/ijms21228631] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/30/2020] [Revised: 11/12/2020] [Accepted: 11/13/2020] [Indexed: 12/22/2022] Open
Abstract
Cold stress is one of the major factors limiting global crop production. For survival at low temperatures, plants need to sense temperature changes in the surrounding environment. How plants sense and respond to the earliest drop in temperature is still not clearly understood. The plasma membrane and its adjacent extracellular and cytoplasmic sites are the first checkpoints for sensing temperature changes and the subsequent events, such as signal generation and solute transport. To understand how plants respond to early cold exposure, we used a mass spectrometry-based phosphoproteomic method to study the temporal changes in protein phosphorylation events in Arabidopsis membranes during 5 to 60 min of cold exposure. The results revealed that brief cold exposures led to rapid phosphorylation changes in the proteins involved in cellular ion homeostasis, solute and protein transport, cytoskeleton organization, vesical trafficking, protein modification, and signal transduction processes. The phosphorylation motif and kinase-substrate network analysis also revealed that multiple protein kinases, including RLKs, MAPKs, CDPKs, and their substrates, could be involved in early cold signaling. Taken together, our results provide a first look at the cold-responsive phosphoproteome changes of Arabidopsis membrane proteins that can be a significant resource to understand how plants respond to an early temperature drop.
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Affiliation(s)
- Md Mostafa Kamal
- United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan; (M.M.K.); (Y.K.)
| | - Shinnosuke Ishikawa
- Graduate School of Bio-Applications and Systems Engineering, Tokyo University of Agriculture and Technology, Koganei 184-8588, Japan; (S.I.); (T.U.)
| | - Fuminori Takahashi
- Gene Discovery Research Group, RIKEN Center for Sustainable Resource Science, 3-1-1 Koyadai, Tsukuba 305-0074, Japan; (F.T.); (K.S.)
| | - Ko Suzuki
- Department of Biochemistry, Iwate Medical University, Yahaba 028-3694, Japan; (K.S.); (M.K.)
| | - Masaharu Kamo
- Department of Biochemistry, Iwate Medical University, Yahaba 028-3694, Japan; (K.S.); (M.K.)
| | - Taishi Umezawa
- Graduate School of Bio-Applications and Systems Engineering, Tokyo University of Agriculture and Technology, Koganei 184-8588, Japan; (S.I.); (T.U.)
| | - Kazuo Shinozaki
- Gene Discovery Research Group, RIKEN Center for Sustainable Resource Science, 3-1-1 Koyadai, Tsukuba 305-0074, Japan; (F.T.); (K.S.)
| | - Yukio Kawamura
- United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan; (M.M.K.); (Y.K.)
- Department of Plant-Bioscience, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan
| | - Matsuo Uemura
- United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan; (M.M.K.); (Y.K.)
- Department of Plant-Bioscience, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan
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12
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Canessa Fortuna A, Zerbetto De Palma G, Aliperti Car L, Armentia L, Vitali V, Zeida A, Estrin DA, Alleva K. Gating in plant plasma membrane aquaporins: the involvement of leucine in the formation of a pore constriction in the closed state. FEBS J 2019; 286:3473-3487. [DOI: 10.1111/febs.14922] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/18/2019] [Revised: 04/25/2019] [Accepted: 05/08/2019] [Indexed: 01/08/2023]
Affiliation(s)
- Agustina Canessa Fortuna
- Facultad de Farmacia y Bioquímica Instituto de Química y Fisicoquímica Biológica (IQUIFIB) CONICET Universidad de Buenos Aires Argentina
- Departamento de Fisicomatemática Facultad de Farmacia y Bioquímica Universidad de Buenos Aires Argentina
| | - Gerardo Zerbetto De Palma
- Facultad de Farmacia y Bioquímica Instituto de Química y Fisicoquímica Biológica (IQUIFIB) CONICET Universidad de Buenos Aires Argentina
- Departamento de Fisicomatemática Facultad de Farmacia y Bioquímica Universidad de Buenos Aires Argentina
- Instituo de Biotecnología Universidad Nacional de Hurlingham Villa Tesei Argentina
| | - Lucio Aliperti Car
- Laboratorio de Fisiología de Proteínas IQUIBICEN y Facultad de Ciencias Exactas y Naturales CONICET Universidad de Buenos Aires Argentina
| | - Luciano Armentia
- Departamento de Fisicomatemática Facultad de Farmacia y Bioquímica Universidad de Buenos Aires Argentina
| | - Victoria Vitali
- Facultad de Farmacia y Bioquímica Instituto de Química y Fisicoquímica Biológica (IQUIFIB) CONICET Universidad de Buenos Aires Argentina
- Departamento de Fisicomatemática Facultad de Farmacia y Bioquímica Universidad de Buenos Aires Argentina
| | - Ari Zeida
- Departamento de Bioquímica Facultad de Medicina Center for Free Radical and Biomedical Research Universidad de la República Montevideo Uruguay
| | - Darío A. Estrin
- DQIAQF‐INQUIMAE Facultad de Ciencias Exactas y Naturales CONICET Universidad de Buenos Aires Argentina
| | - Karina Alleva
- Facultad de Farmacia y Bioquímica Instituto de Química y Fisicoquímica Biológica (IQUIFIB) CONICET Universidad de Buenos Aires Argentina
- Departamento de Fisicomatemática Facultad de Farmacia y Bioquímica Universidad de Buenos Aires Argentina
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13
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Vitali V, Jozefkowicz C, Canessa Fortuna A, Soto G, González Flecha FL, Alleva K. Cooperativity in proton sensing by PIP aquaporins. FEBS J 2018; 286:991-1002. [PMID: 30430736 DOI: 10.1111/febs.14701] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/16/2018] [Revised: 11/05/2018] [Accepted: 11/13/2018] [Indexed: 11/28/2022]
Abstract
One of the most intriguing properties of plasma membrane intrinsic protein (PIP) aquaporins (AQPs) is their ability to modulate water transport by sensing different levels of intracellular pH through the assembly of homo- and heterotetrameric molecular species in the plasma membrane. In this work, using a phenomenological modeling approach, we demonstrate that cooperativity in PIP biological response cannot be directly attributed to a cooperative proton binding, as it is usually considered, since it could also be the consequence of a cooperative conformation transition between open and closed states of the channel. Moreover, our results show that, when mixed populations of homo- and heterotetrameric PIP channels are coexpressed in the plasma membrane of the same cell, the observed decrease in the degree of positive cooperativity would result from the simultaneous presence of molecular species with different levels of proton sensing. Indeed, the random mixing between different PIP paralogues as subunits in a single tetramer, plus the possibility of mixed populations of homo- and heterotetrameric PIP channels widen the spectrum of cooperative responses of a cell membrane. Our approach offers a deep understanding of cooperative transport of AQP channels, as members of a multiprotein family where the relevant proton binding sites of each member have not been clearly elucidated yet.
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Affiliation(s)
- Victoria Vitali
- Universidad de Buenos Aires, CONICET, Facultad de Farmacia y Bioquímica, Instituto de Química y Fisicoquímica Biológica (IQUIFIB), Argentina.,Universidad de Buenos Aires, Facultad de Farmacia y Bioquímica, Departamento de Fisicomatemática, Argentina
| | - Cintia Jozefkowicz
- Instituto Nacional de Tecnología Agropecuaria, INTA, Castelar, Argentina.,CONICET, Buenos Aires, Argentina
| | - Agustina Canessa Fortuna
- Universidad de Buenos Aires, CONICET, Facultad de Farmacia y Bioquímica, Instituto de Química y Fisicoquímica Biológica (IQUIFIB), Argentina.,Universidad de Buenos Aires, Facultad de Farmacia y Bioquímica, Departamento de Fisicomatemática, Argentina
| | - Gabriela Soto
- Instituto Nacional de Tecnología Agropecuaria, INTA, Castelar, Argentina.,CONICET, Buenos Aires, Argentina
| | - F Luis González Flecha
- Universidad de Buenos Aires, CONICET, Facultad de Farmacia y Bioquímica, Instituto de Química y Fisicoquímica Biológica (IQUIFIB), Argentina
| | - Karina Alleva
- Universidad de Buenos Aires, CONICET, Facultad de Farmacia y Bioquímica, Instituto de Química y Fisicoquímica Biológica (IQUIFIB), Argentina.,Universidad de Buenos Aires, Facultad de Farmacia y Bioquímica, Departamento de Fisicomatemática, Argentina
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14
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Tan X, Xu H, Khan S, Equiza MA, Lee SH, Vaziriyeganeh M, Zwiazek JJ. Plant water transport and aquaporins in oxygen-deprived environments. JOURNAL OF PLANT PHYSIOLOGY 2018; 227:20-30. [PMID: 29779706 DOI: 10.1016/j.jplph.2018.05.003] [Citation(s) in RCA: 31] [Impact Index Per Article: 5.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/31/2017] [Revised: 05/01/2018] [Accepted: 05/02/2018] [Indexed: 06/08/2023]
Abstract
Oxygen deprivation commonly affects plants exposed to flooding and soil compaction. The resulting root hypoxia has an immediate effect on plant water relations and upsets water balance. Hypoxia inhibits root water transport and triggers stomatal closure. The processes contributing to the inhibition of root hydraulic conductivity and conductance (hydraulic conductivity of the whole root system) are complex and involve changes in root morphology and the functions of aquaporins. Aquaporins (AQPs) comprise a group of membrane intrinsic proteins that are responsible for the transport of water, as well as some small neutral solutes and ions. They respond to a wide range of environmental stresses including O2 deprivation, but the underlying functional mechanisms are still elusive. The aquaporin-mediated water transport is affected by the acidification of the cytoplasm and depletion of ATP that is required for aquaporin phosphorylation and membrane functions. Cytoplasmic pH, phosphorylation, and intracellular Ca2+ concentration directly control AQP gating, all of which are related to O2 deprivation. This review addresses the structural determinants that are essential for pore conformational changes in AQPs, to highlight the underlying mechanisms triggered by O2 deprivation stress. Gene expression of AQPs is modified in hypoxic plants, which may constitute an important, yet little explored, mechanism of hypoxia tolerance. In addition to water transport, AQPs may contribute to hypoxia tolerance by transporting O2, H2O2, and lactic acid. Responses of plants to O2 deprivation, and especially those that contribute to maintenance of water transport, are highly complex and entail the signals originating in roots and shoots that lead to and follow the stomatal closure. These complex responses may involve ethylene, abscisic acid, and possibly other hormonal factors and signaling molecules in ways that remain to be elucidated.
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Affiliation(s)
- Xiangfeng Tan
- Department of Renewable Resources, University of Alberta, 442 Earth Sciences Bldg., Edmonton, AB, T6G 2E3, Canada
| | - Hao Xu
- Agriculture and Agri-Food Canada, Summerland Research and Development Centre, Summerland, BC, V0H 1Z0, Canada
| | - Shanjida Khan
- Department of Renewable Resources, University of Alberta, 442 Earth Sciences Bldg., Edmonton, AB, T6G 2E3, Canada
| | - Maria A Equiza
- Department of Renewable Resources, University of Alberta, 442 Earth Sciences Bldg., Edmonton, AB, T6G 2E3, Canada
| | - Seong H Lee
- Department of Renewable Resources, University of Alberta, 442 Earth Sciences Bldg., Edmonton, AB, T6G 2E3, Canada
| | - Maryamsadat Vaziriyeganeh
- Department of Renewable Resources, University of Alberta, 442 Earth Sciences Bldg., Edmonton, AB, T6G 2E3, Canada
| | - Janusz J Zwiazek
- Department of Renewable Resources, University of Alberta, 442 Earth Sciences Bldg., Edmonton, AB, T6G 2E3, Canada.
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15
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Groszmann M, Osborn HL, Evans JR. Carbon dioxide and water transport through plant aquaporins. PLANT, CELL & ENVIRONMENT 2017; 40:938-961. [PMID: 27739588 DOI: 10.1111/pce.12844] [Citation(s) in RCA: 73] [Impact Index Per Article: 10.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/19/2016] [Revised: 09/01/2016] [Accepted: 09/22/2016] [Indexed: 05/25/2023]
Abstract
Aquaporins are channel proteins that function to increase the permeability of biological membranes. In plants, aquaporins are encoded by multigene families that have undergone substantial diversification in land plants. The plasma membrane intrinsic proteins (PIPs) subfamily of aquaporins is of particular interest given their potential to improve plant water relations and photosynthesis. Flowering plants have between 7 and 28 PIP genes. Their expression varies with tissue and cell type, through development and in response to a variety of factors, contributing to the dynamic and tissue specific control of permeability. There are a growing number of PIPs shown to act as water channels, but those altering membrane permeability to CO2 are more limited. The structural basis for selective substrate specificities has not yet been resolved, although a few key amino acid positions have been identified. Several regions important for dimerization, gating and trafficking are also known. PIP aquaporins assemble as tetramers and their properties depend on the monomeric composition. PIPs control water flux into and out of veins and stomatal guard cells and also increase membrane permeability to CO2 in mesophyll and stomatal guard cells. The latter increases the effectiveness of Rubisco and can potentially influence transpiration efficiency.
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Affiliation(s)
- Michael Groszmann
- Australian Research Council Centre of Excellence for Translational Photosynthesis, Division of Plant Sciences, Research School of Biology, The Australian National University, Acton, ACT, 2601, Australia
| | - Hannah L Osborn
- Australian Research Council Centre of Excellence for Translational Photosynthesis, Division of Plant Sciences, Research School of Biology, The Australian National University, Acton, ACT, 2601, Australia
| | - John R Evans
- Australian Research Council Centre of Excellence for Translational Photosynthesis, Division of Plant Sciences, Research School of Biology, The Australian National University, Acton, ACT, 2601, Australia
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16
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Rhee J, Horie T, Sasano S, Nakahara Y, Katsuhara M. Identification of an H 2 O 2 permeable PIP aquaporin in barley and a serine residue promoting H 2 O 2 transport. PHYSIOLOGIA PLANTARUM 2017; 159:120-128. [PMID: 27595571 DOI: 10.1111/ppl.12508] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/30/2016] [Revised: 07/27/2016] [Accepted: 08/08/2016] [Indexed: 05/12/2023]
Abstract
A barley (Hordeum vulgare) plasma membrane type aquaporin, HvPIP2;5, was identified as an H2 O2 permeable aquaporin among 21 barley and rice PIPs examined in the heterologous expression system using Saccharomyces cerevisiae. Four TIPs were also detected as H2 O2 -transporting aquaporins among 15 barley and rice TIPs. Influx of H2 O2 into yeast cells expressing HvPIP2;5 was determined with a florescent-dye-based assay. Indirect immunofluorescence indicated that the expression of HvPIP2;5 protein was ubiquitous in root tissues, and was also weakly observed in leaf epidermal cells and cells in the vascular bundle. Point mutated variants of HvPIP2;5 were generated by the site-directed mutagenesis. Growth assays of yeast cells expressing these mutated HvPIP2;5 proteins suggested that Ser-126 in HvPIP2;5 has a large impact on H2 O2 transport with a minor influence on the HvPIP2;5-mediated water transport.
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Affiliation(s)
- Jiye Rhee
- Institute of Plant Science and Resources, Okayama University, Kurashiki, 710-0046, Japan
- Faculty of Sciences, University of South Bohemia in Ceske Budejovice, Ceske Budejovice, Czech Republic
| | - Tomoaki Horie
- Division of Applied Biology, Faculty of Textile Science and Technology, Shinshu University, Ueda, 386-8567, Japan
| | - Shizuka Sasano
- Institute of Plant Science and Resources, Okayama University, Kurashiki, 710-0046, Japan
| | - Yoshiki Nakahara
- Institute of Plant Science and Resources, Okayama University, Kurashiki, 710-0046, Japan
- Research Fellow of the Japan Society for the Promotion of Science, 5-3-1 Kojimachi, Chiyoda-ku, Tokyo, 102-0083, Japan
| | - Maki Katsuhara
- Institute of Plant Science and Resources, Okayama University, Kurashiki, 710-0046, Japan
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Loop B serine of a plasma membrane aquaporin type PIP2 but not PIP1 plays a key role in pH sensing. BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES 2016; 1858:2778-2787. [DOI: 10.1016/j.bbamem.2016.08.002] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/08/2016] [Revised: 07/08/2016] [Accepted: 08/07/2016] [Indexed: 11/17/2022]
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18
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Li R, Wang J, Li S, Zhang L, Qi C, Weeda S, Zhao B, Ren S, Guo YD. Plasma Membrane Intrinsic Proteins SlPIP2;1, SlPIP2;7 and SlPIP2;5 Conferring Enhanced Drought Stress Tolerance in Tomato. Sci Rep 2016; 6:31814. [PMID: 27545827 PMCID: PMC4992886 DOI: 10.1038/srep31814] [Citation(s) in RCA: 38] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/30/2016] [Accepted: 07/26/2016] [Indexed: 11/30/2022] Open
Abstract
The function of aquaporin (AQP) protein in transporting water is crucial for plants to survive in drought stress. With 47 homologues in tomato (Solanum lycopersicum) were reported, but the individual and integrated functions of aquaporins involved in drought response remains unclear. Here, three plasma membrane intrinsic protein genes, SlPIP2;1, SlPIP2;7 and SlPIP2;5, were identified as candidate aquaporins genes because of highly expressed in tomato roots. Assay on expression in Xenopus oocytes demonstrated that SlPIP2s protein displayed water channel activity and facilitated water transport into the cells. With real-time PCR and in situ hybridization analysis, SlPIP2s were considered to be involved in response to drought treatment. To test its function, transgenic Arabidopsis and tomato lines overexpressing SlPIP2;1, SlPIP2;7 or SlPIP2;5 were generated. Compared with wild type, the over-expression of SlPIP2;1, SlPIP2;7 or SlPIP2;5 transgenic Arabidopsis and tomato plants all showed significantly higher hydraulic conductivity levels and survival rates under both normal and drought conditions. Taken together, this study concludes that aquaporins (SlPIP2;1, SlPIP2;7 and SlPIP2;5) contribute substantially to root water uptake in tomato plants through improving plant water content and maintaining osmotic balance.
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Affiliation(s)
- Ren Li
- College of Horticulture, China Agricultural University, 100193 Beijing, China
- Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences, 100081 Beijing, China
| | - Jinfang Wang
- College of Horticulture, China Agricultural University, 100193 Beijing, China
| | - Shuangtao Li
- College of Horticulture, China Agricultural University, 100193 Beijing, China
| | - Lei Zhang
- College of Horticulture, China Agricultural University, 100193 Beijing, China
| | - Chuandong Qi
- College of Horticulture, China Agricultural University, 100193 Beijing, China
| | - Sarah Weeda
- School of Agriculture, Virginia State University, PO Box 9061, Petersburg, VA 23806, USA
| | - Bing Zhao
- College of Horticulture, China Agricultural University, 100193 Beijing, China
| | - Shuxin Ren
- School of Agriculture, Virginia State University, PO Box 9061, Petersburg, VA 23806, USA
| | - Yang-Dong Guo
- College of Horticulture, China Agricultural University, 100193 Beijing, China
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Martínez-Ballesta MDC, Pérez-Sánchez H, Moreno DA, Carvajal M. Plant plasma membrane aquaporins in natural vesicles as potential stabilizers and carriers of glucosinolates. Colloids Surf B Biointerfaces 2016; 143:318-326. [DOI: 10.1016/j.colsurfb.2016.03.056] [Citation(s) in RCA: 25] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/03/2016] [Revised: 03/15/2016] [Accepted: 03/18/2016] [Indexed: 02/02/2023]
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20
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Lopez D, Amira MB, Brown D, Muries B, Brunel-Michac N, Bourgerie S, Porcheron B, Lemoine R, Chrestin H, Mollison E, Di Cola A, Frigerio L, Julien JL, Gousset-Dupont A, Fumanal B, Label P, Pujade-Renaud V, Auguin D, Venisse JS. The Hevea brasiliensis XIP aquaporin subfamily: genomic, structural and functional characterizations with relevance to intensive latex harvesting. PLANT MOLECULAR BIOLOGY 2016; 91:375-96. [PMID: 27068521 DOI: 10.1007/s11103-016-0462-y] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/14/2015] [Accepted: 02/25/2016] [Indexed: 05/22/2023]
Abstract
X-Intrinsic Proteins (XIP) were recently identified in a narrow range of plants as a full clade within the aquaporins. These channels reportedly facilitate the transport of a wide range of hydrophobic solutes. The functional roles of XIP in planta remain poorly identified. In this study, we found three XIP genes (HbXIP1;1, HbXIP2;1 and HbXIP3;1) in the Hevea brasiliensis genome. Comprehensive bioinformatics, biochemical and structural analyses were used to acquire a better understanding of this AQP subfamily. Phylogenetic analysis revealed that HbXIPs clustered into two major groups, each distributed in a specific lineage of the order Malpighiales. Tissue-specific expression profiles showed that only HbXIP2;1 was expressed in all the vegetative tissues tested (leaves, stem, bark, xylem and latex), suggesting that HbXIP2;1 could take part in a wide range of cellular processes. This is particularly relevant to the rubber-producing laticiferous system, where this isoform was found to be up-regulated during tapping and ethylene treatments. Furthermore, the XIP transcriptional pattern is significantly correlated to latex production level. Structural comparison with SoPIP2;1 from Spinacia oleracea species provides new insights into the possible role of structural checkpoints by which HbXIP2;1 ensures glycerol transfer across the membrane. From these results, we discuss the physiological involvement of glycerol and HbXIP2;1 in water homeostasis and carbon stream of challenged laticifers. The characterization of HbXIP2;1 during rubber tree tapping lends new insights into molecular and physiological response processes of laticifer metabolism in the context of latex exploitation.
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Affiliation(s)
- David Lopez
- Clermont Université, Université Blaise Pascal, INRA, UMR 547 PIAF, BP 10448, 63000, Clermont-Ferrand, France
| | - Maroua Ben Amira
- Clermont Université, Université Blaise Pascal, INRA, UMR 547 PIAF, BP 10448, 63000, Clermont-Ferrand, France
| | - Daniel Brown
- School of Life Sciences, University of Warwick, Coventry, CV4 7AL, UK
- Biotechnology Unit, Tun Abdul Razak Research Centre, Brickendonbury, Hertford, UK
| | - Beatriz Muries
- Institut des Sciences de la Vie, Université catholique de Louvain, 1348, Louvain-la-Neuve, Belgium
| | - Nicole Brunel-Michac
- Clermont Université, Université Blaise Pascal, INRA, UMR 547 PIAF, BP 10448, 63000, Clermont-Ferrand, France
| | - Sylvain Bourgerie
- Laboratoire de Biologie des Ligneux et des Grandes Cultures, Université d'Orléans, UPRES EA 1207, INRA-USC1328, 45067, Orléans, France
| | - Benoit Porcheron
- Ecologie, Biologie des Interactions, Equipe SEVE, UMR 7267 CNRS/Université de Poitiers, Bâtiment B31, TSA 51106, 86073, Poitiers Cedex 9, France
| | - Remi Lemoine
- Ecologie, Biologie des Interactions, Equipe SEVE, UMR 7267 CNRS/Université de Poitiers, Bâtiment B31, TSA 51106, 86073, Poitiers Cedex 9, France
| | - Hervé Chrestin
- Institut de Recherche pour le Développement, UR060/CEFE-CNRS, 1029 route de Mende, 34032, Montpellier, France
| | - Ewan Mollison
- Biotechnology Unit, Tun Abdul Razak Research Centre, Brickendonbury, Hertford, UK
| | - Alessandra Di Cola
- Biotechnology Unit, Tun Abdul Razak Research Centre, Brickendonbury, Hertford, UK
| | - Lorenzo Frigerio
- School of Life Sciences, University of Warwick, Coventry, CV4 7AL, UK
| | - Jean-Louis Julien
- Clermont Université, Université Blaise Pascal, INRA, UMR 547 PIAF, BP 10448, 63000, Clermont-Ferrand, France
| | - Aurélie Gousset-Dupont
- Clermont Université, Université Blaise Pascal, INRA, UMR 547 PIAF, BP 10448, 63000, Clermont-Ferrand, France
| | - Boris Fumanal
- Clermont Université, Université Blaise Pascal, INRA, UMR 547 PIAF, BP 10448, 63000, Clermont-Ferrand, France
| | - Philippe Label
- Clermont Université, Université Blaise Pascal, INRA, UMR 547 PIAF, BP 10448, 63000, Clermont-Ferrand, France
| | - Valérie Pujade-Renaud
- Clermont Université, Université Blaise Pascal, INRA, UMR 547 PIAF, BP 10448, 63000, Clermont-Ferrand, France
- CIRAD, UMR AGAP, 63000, Clermont-Ferrand, France
| | - Daniel Auguin
- Laboratoire de Biologie des Ligneux et des Grandes Cultures, Université d'Orléans, UPRES EA 1207, INRA-USC1328, 45067, Orléans, France.
| | - Jean-Stéphane Venisse
- Clermont Université, Université Blaise Pascal, INRA, UMR 547 PIAF, BP 10448, 63000, Clermont-Ferrand, France.
- Campus Universitaire des Cézeaux, 8 Avenue Blaise Pascal, TSA 60026, CS 60026, 63178, Aubiere Cedex, France.
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Turgeman T, Shatil-Cohen A, Moshelion M, Teper-Bamnolker P, Skory CD, Lichter A, Eshel D. The Role of Aquaporins in pH-Dependent Germination of Rhizopus delemar Spores. PLoS One 2016; 11:e0150543. [PMID: 26959825 PMCID: PMC4784744 DOI: 10.1371/journal.pone.0150543] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/12/2015] [Accepted: 02/15/2016] [Indexed: 01/18/2023] Open
Abstract
Rhizopus delemar and associated species attack a wide range of fruit and vegetables after harvest. Host nutrients and acidic pH are required for optimal germination of R. delemar, and we studied how this process is triggered. Glucose induced spore swelling in an acidic environment, expressed by an up to 3-fold increase in spore diameter, whereas spore diameter was smaller in a neutral environment. When suspended in an acidic environment, the spores started to float, indicating a change in their density. Treatment of the spores with HgCl2, an aquaporin blocker, prevented floating and inhibited spore swelling and germ-tube emergence, indicating the importance of water uptake at the early stages of germination. Two putative candidate aquaporin-encoding genes-RdAQP1 and RdAQP2-were identified in the R. delemar genome. Both presented the conserved NPA motif and six-transmembrane domain topology. Expressing RdAQP1 and RdAQP2 in Arabidopsis protoplasts increased the cells' osmotic water permeability coefficient (Pf) compared to controls, indicating their role as water channels. A decrease in R. delemar aquaporin activity with increasing external pH suggested pH regulation of these proteins. Substitution of two histidine (His) residues, positioned on two loops facing the outer side of the cell, with alanine eliminated the pH sensing resulting in similar Pf values under acidic and basic conditions. Since hydration is critical for spore switching from the resting to activate state, we suggest that pH regulation of the aquaporins can regulate the initial phase of R. delemar spore germination, followed by germ-tube elongation and host-tissue infection.
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Affiliation(s)
- Tidhar Turgeman
- Department of Postharvest Sciences of Fresh Produce, Agricultural Research Organization (ARO), The Volcani Center, Bet-Dagan, Israel
- Department of Plant Sciences and Genetics in Agriculture, The Robert H. Smith Faculty of Agriculture, Food and Environment, The Hebrew University of Jerusalem, Rehovot, Israel
| | - Arava Shatil-Cohen
- Department of Plant Sciences and Genetics in Agriculture, The Robert H. Smith Faculty of Agriculture, Food and Environment, The Hebrew University of Jerusalem, Rehovot, Israel
| | - Menachem Moshelion
- Department of Plant Sciences and Genetics in Agriculture, The Robert H. Smith Faculty of Agriculture, Food and Environment, The Hebrew University of Jerusalem, Rehovot, Israel
| | - Paula Teper-Bamnolker
- Department of Postharvest Sciences of Fresh Produce, Agricultural Research Organization (ARO), The Volcani Center, Bet-Dagan, Israel
| | - Christopher D. Skory
- Renewable Product Technology Research Unit, NTL Center for Agricultural Utilization Research, Peoria, Illinois, United States of America
| | - Amnon Lichter
- Department of Postharvest Sciences of Fresh Produce, Agricultural Research Organization (ARO), The Volcani Center, Bet-Dagan, Israel
| | - Dani Eshel
- Department of Postharvest Sciences of Fresh Produce, Agricultural Research Organization (ARO), The Volcani Center, Bet-Dagan, Israel
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22
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Ding L, Gao C, Li Y, Li Y, Zhu Y, Xu G, Shen Q, Kaldenhoff R, Kai L, Guo S. The enhanced drought tolerance of rice plants under ammonium is related to aquaporin (AQP). PLANT SCIENCE : AN INTERNATIONAL JOURNAL OF EXPERIMENTAL PLANT BIOLOGY 2015; 234:14-21. [PMID: 25804805 DOI: 10.1016/j.plantsci.2015.01.016] [Citation(s) in RCA: 64] [Impact Index Per Article: 7.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/10/2014] [Revised: 01/24/2015] [Accepted: 01/29/2015] [Indexed: 05/02/2023]
Abstract
Previously, we demonstrated that drought resistance in rice seedlings was increased by ammonium (NH4(+)) treatment, but not by nitrate (NO3(-)) treatment, and that the change was associated with root development. To study the effects of different forms of nitrogen on water uptake and root growth under drought conditions, we subjected two rice cultivars (cv. 'Shanyou 63' hybrid indica and cv. 'Yangdao 6' indica, China) to polyethylene glycol-induced drought stress in a glasshouse using hydroponic culture. Under drought conditions, NH4(+) significantly stimulated root growth compared to NO3(-), as indicated by the root length, surface area, volume, and numbers of lateral roots and root tips. Drought stress decreased the root elongation rate in both cultivars when they were supplied with NO3(-), while the rate was unaffected in the presence of NH4(+). Drought stress significantly increased root protoplast water permeability, root hydraulic conductivity, and the expression of root aquaporin (AQP) plasma intrinsic protein (PIP) genes in rice plants supplied with NH4(+); these changes were not observed in plants supplied with NO3(-). Additionally, ethylene, which is involved in the regulation of root growth, accumulated in rice roots supplied with NO3(-) under conditions of drought stress. We conclude that the increase in AQP expression and/or activity enhanced the root water uptake ability and the drought tolerance of rice plants supplied with NH4(+).
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Affiliation(s)
- Lei Ding
- Jiangsu Key Lab for Organic Waste Utilization and National Engineering Research Center for Organic-based Fertilizers, Nanjing Agricultural University, 210095 China
| | - Cuimin Gao
- Jiangsu Key Lab for Organic Waste Utilization and National Engineering Research Center for Organic-based Fertilizers, Nanjing Agricultural University, 210095 China
| | - Yingrui Li
- Jiangsu Key Lab for Organic Waste Utilization and National Engineering Research Center for Organic-based Fertilizers, Nanjing Agricultural University, 210095 China
| | - Yong Li
- Crop Physiology and Production Center (CPPC), National Key Laboratory of Crop Genetic Improvement, MOA, Huazhong Agricultural University, Wuhan, Hubei 430070, China
| | - Yiyong Zhu
- Jiangsu Key Lab for Organic Waste Utilization and National Engineering Research Center for Organic-based Fertilizers, Nanjing Agricultural University, 210095 China
| | - Guohua Xu
- Jiangsu Key Lab for Organic Waste Utilization and National Engineering Research Center for Organic-based Fertilizers, Nanjing Agricultural University, 210095 China
| | - Qirong Shen
- Jiangsu Key Lab for Organic Waste Utilization and National Engineering Research Center for Organic-based Fertilizers, Nanjing Agricultural University, 210095 China
| | - Ralf Kaldenhoff
- Department of Biology, Applied Plant Sciences, Technische Universität Darmstadt, Schnittspahn Strasse 10, D-64287 Darmstadt, Germany
| | - Lei Kai
- Department of Biology, Applied Plant Sciences, Technische Universität Darmstadt, Schnittspahn Strasse 10, D-64287 Darmstadt, Germany
| | - Shiwei Guo
- Jiangsu Key Lab for Organic Waste Utilization and National Engineering Research Center for Organic-based Fertilizers, Nanjing Agricultural University, 210095 China.
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Ma X, Shatil-Cohen A, Ben-Dor S, Wigoda N, Perera IY, Im YJ, Diminshtein S, Yu L, Boss WF, Moshelion M, Moran N. Do phosphoinositides regulate membrane water permeability of tobacco protoplasts by enhancing the aquaporin pathway? PLANTA 2015; 241:741-55. [PMID: 25486887 DOI: 10.1007/s00425-014-2216-x] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/23/2014] [Accepted: 11/25/2014] [Indexed: 05/07/2023]
Abstract
MAIN CONCLUSION Enhancing the membrane content of PtdInsP 2 , the already-recognized protein-regulating lipid, increased the osmotic water permeability of tobacco protoplasts, apparently by increasing the abundance of active aquaporins in their membranes. While phosphoinositides are implicated in cell volume changes and are known to regulate some ion channels, their modulation of aquaporins activity has not yet been reported for any organism. To examine this, we compared the osmotic water permeability (P f) of protoplasts isolated from tobacco (Nicotiana tabacum) cultured cells (NT1) with different (genetically lowered or elevated relative to controls) levels of inositol trisphosphate (InsP3) and phosphatidyl inositol [4,5] bisphosphate (PtdInsP2). To achieve this, the cells were transformed with, respectively, the human InsP3 5-phosphatase ('Ptase cells') or human phosphatidylinositol (4) phosphate 5-kinase ('PIPK cells'). The mean P f of the PIPK cells was several-fold higher relative to that of controls and Ptase cells. Three results favor aquaporins over the membrane matrix as underlying this excessive P f: (1) transient expression of the maize aquaporin ZmPIP2;4 in the PIPK cells increased P f by 12-30 μm s(-1), while in the controls only by 3-4 μm s(-1). (2) Cytosol acidification-known to inhibit aquaporins-lowered the P f in the PIPK cells down to control levels. (3) The transcript of at least one aquaporin was elevated in the PIPK cells. Together, the three results demonstrate the differences between the PIPK cells and their controls, and suggest a hitherto unobserved regulation of aquaporins by phosphoinositides, which could occur through direct interaction or indirect phosphoinositides-dependent cellular effects.
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Affiliation(s)
- Xiaohong Ma
- The Robert H. Smith Faculty of Agriculture Food and Environment, The Robert H. Smith Institute for Plant Sciences and Genetics in Agriculture, The Hebrew University of Jerusalem, 76100, Rehovot, Israel
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Assentoft M, Larsen BR, MacAulay N. Regulation and Function of AQP4 in the Central Nervous System. Neurochem Res 2015; 40:2615-27. [PMID: 25630715 DOI: 10.1007/s11064-015-1519-z] [Citation(s) in RCA: 36] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/15/2014] [Revised: 01/08/2015] [Accepted: 01/12/2015] [Indexed: 01/09/2023]
Abstract
Aquaporin 4 (AQP4) is the predominant water channel in the mammalian brain and is mainly expressed in the perivascular glial endfeet at the brain-blood interface. Based on studies on AQP4(-/-) mice, AQP4 has been assigned physiological roles in stimulus-induced K(+) clearance, paravascular fluid flow, and brain edema formation. Conflicting data have been presented on the role of AQP4 in K(+) clearance and associated extracellular space shrinkage and on the stroke-induced alterations of AQP4 expression levels during edema formation, raising questions about the functional importance of AQP4 in these (patho)physiological aspects. Phosphorylation-dependent gating of AQP4 has been proposed as a regulatory mechanism for AQP4-mediated osmotic water transport. This paradigm was, however, recently challenged by experimental evidence and molecular dynamics simulations. Regulatory patterns and physiological roles for AQP4 thus remain to be fully explored.
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Affiliation(s)
- Mette Assentoft
- Department of Cellular and Molecular Medicine, Faculty of Health and Medical Sciences, University of Copenhagen, Blegdamsvej 3, Bldg. 12.6, 2200, Copenhagen, Denmark
| | - Brian Roland Larsen
- Department of Cellular and Molecular Medicine, Faculty of Health and Medical Sciences, University of Copenhagen, Blegdamsvej 3, Bldg. 12.6, 2200, Copenhagen, Denmark
| | - Nanna MacAulay
- Department of Cellular and Molecular Medicine, Faculty of Health and Medical Sciences, University of Copenhagen, Blegdamsvej 3, Bldg. 12.6, 2200, Copenhagen, Denmark.
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25
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Xu H, Kemppainen M, El Kayal W, Lee SH, Pardo AG, Cooke JEK, Zwiazek JJ. Overexpression of Laccaria bicolor aquaporin JQ585595 alters root water transport properties in ectomycorrhizal white spruce (Picea glauca) seedlings. THE NEW PHYTOLOGIST 2015; 205:757-70. [PMID: 25323307 DOI: 10.1111/nph.13098] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/03/2014] [Accepted: 08/27/2014] [Indexed: 05/20/2023]
Abstract
The contribution of hyphae to water transport in ectomycorrhizal (ECM) white spruce (Picea glauca) seedlings was examined by altering expression of a major water-transporting aquaporin in Laccaria bicolor. Picea glauca was inoculated with wild-type (WT), mock transgenic or L. bicolor aquaporin JQ585595-overexpressing (OE) strains and exposed to root temperatures ranging from 5 to 20°C to examine the root water transport properties, physiological responses and plasma membrane intrinsic protein (PIP) expression in colonized plants. Mycorrhization increased shoot water potential, transpiration, net photosynthetic rates, root hydraulic conductivity and root cortical cell hydraulic conductivity in seedlings. At 20°C, OE plants had higher root hydraulic conductivity compared with WT plants and the increases were accompanied by higher expression of P. glauca PIP GQ03401_M18.1 in roots. In contrast to WT L. bicolor, the effects of OE fungi on root and root cortical cell hydraulic conductivities were abolished at 10 and 5°C in the absence of major changes in the examined transcript levels of P. glauca root PIPs. The results provide evidence for the importance of fungal aquaporins in root water transport of mycorrhizal plants. They also demonstrate links between hyphal water transport, root aquaporin expression and root water transport in ECM plants.
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Affiliation(s)
- Hao Xu
- Department of Renewable Resources, University of Alberta, Edmonton, AB, T6G 2E3, Canada
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26
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Transcriptomic analysis of the role of Rim101/PacC in the adaptation of Ustilago maydis to an alkaline environment. Microbiology (Reading) 2014; 160:1985-1998. [DOI: 10.1099/mic.0.076216-0] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
Abstract
Alkaline pH triggers an adaptation mechanism in fungi that is mediated by Rim101/PacCp, a zinc finger transcription factor. To identify the genes under its control in Ustilago maydis, we performed microarray analyses, comparing gene expression in a wild-type strain versus a rim101/pacC mutation strain of the fungus. In this study we obtained evidence of the large number of genes regulated mostly directly, but also indirectly (probably through regulation of other transcription factors), by Rim101/PacCp, including proteins involved in a large number of physiological activities of the fungus. Our analyses suggest that the response to alkaline conditions under the control of the Pal/Rim pathway involves changes in the cell wall and plasma membrane through alterations in their lipid, protein and polysaccharide composition, changes in cell polarity, actin cytoskeleton organization, and budding patterns. Also as expected, adaptation involves regulation by Rim101/PacC of genes involved in meiotic functions, such as recombination and segregation, and expression of genes involved in ion and nutrient transport, as well as general vacuole functions.
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27
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Mercury increases water permeability of a plant aquaporin through a non-cysteine-related mechanism. Biochem J 2013; 454:491-9. [PMID: 23819815 DOI: 10.1042/bj20130377] [Citation(s) in RCA: 35] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
Abstract
Water transport across cellular membranes is mediated by a family of membrane proteins known as AQPs (aquaporins). AQPs were first discovered on the basis of their ability to be inhibited by mercurial compounds, an experiment which has followed the AQP field ever since. Although mercury inhibition is most common, many AQPs are mercury insensitive. In plants, regulation of AQPs is important in order to cope with environmental changes. Plant plasma membrane AQPs are known to be gated by phosphorylation, pH and Ca²⁺. We have previously solved the structure of the spinach AQP SoPIP2;1 (Spinacia oleracea plasma membrane intrinsic protein 2;1) in closed and open conformations and proposed a mechanism for how this gating can be achieved. To study the effect of mercury on SoPIP2;1 we solved the structure of the SoPIP2;1-mercury complex and characterized the water transport ability using proteoliposomes. The structure revealed mercury binding to three out of four cysteine residues. In contrast to what is normally seen for AQPs, mercury increased the water transport rate of SoPIP2;1, an effect which could not be attributed to any of the cysteine residues. This indicates that other factors might influence the effect of mercury on SoPIP2;1, one of which could be the properties of the lipid bilayer.
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28
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Navarro-Ródenas A, Bárzana G, Nicolás E, Carra A, Schubert A, Morte A. Expression analysis of aquaporins from desert truffle mycorrhizal symbiosis reveals a fine-tuned regulation under drought. MOLECULAR PLANT-MICROBE INTERACTIONS : MPMI 2013; 26:1068-78. [PMID: 23656332 DOI: 10.1094/mpmi-07-12-0178-r] [Citation(s) in RCA: 30] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/07/2023]
Abstract
We have performed the isolation, functional characterization, and expression analysis of aquaporins in roots and leaves of Helianthemum almeriense, in order to evaluate their roles in tolerance to water deficit. Five cDNAs, named HaPIP1;1, HaPIP1;2, HaPIP2;1, HaPIP2;2, and HaTIP1;1, were isolated from H. almeriense. A phylogenetic analysis of deduced proteins confirmed that they belong to the water channel proteins family. The HaPIP1;1, HaPIP2;1, and HaTIP1;1 genes encode functional water channel proteins, as indicated by expression assays in Saccharomyces cerevisiae, showing divergent roles in the transport of water, CO2, and NH3. The expression patterns of the genes isolated from H. almeriense and of a previously described gene from Terfezia claveryi (TcAQP1) were analyzed in mycorrhizal and nonmycorrhizal plants cultivated under well-watered or drought-stress conditions. Some of the studied aquaporins were subjected to fine-tuned expression only under drought-stress conditions. A beneficial effect on plant physiological parameters was observed in mycorrhizal plants with respect to nonmycorrhizal ones. Moreover, stress induced a change in the mycorrhizal type formed, which was more intracellular under drought stress. The combination of a high intracellular colonization, together with the fine-tuned expression of aquaporins could result in a morphophysiological adaptation of this symbiosis to drought conditions.
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Affiliation(s)
- Alfonso Navarro-Ródenas
- Departamento Biología Vegetal Botánica, Facultad de Biología, Universidad de Murcia, Murcia, Spain
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29
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Bienert GP, Heinen RB, Berny MC, Chaumont F. Maize plasma membrane aquaporin ZmPIP2;5, but not ZmPIP1;2, facilitates transmembrane diffusion of hydrogen peroxide. BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES 2013; 1838:216-22. [PMID: 23994602 DOI: 10.1016/j.bbamem.2013.08.011] [Citation(s) in RCA: 50] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/04/2013] [Revised: 07/24/2013] [Accepted: 08/15/2013] [Indexed: 11/17/2022]
Abstract
Plant aquaporins play important roles in transmembrane water transport processes, but some also facilitate the diffusion of other small uncharged solutes ranging from gases to metalloids. Recent evidence suggests that the transmembrane movement of hydrogen peroxide, an intra- and intercellular multifunctional signaling and defense compound, can be regulated by aquaporins. We addressed the question whether maize aquaporins belonging to the plasma membrane intrinsic protein (PIP) subfamily facilitate hydrogen peroxide diffusion using heterologous expression in the yeast Saccharomyces cerevisiae. We showed that ZmPIP proteins belonging to the PIP1 and PIP2 groups were significantly expressed in yeast cells only after codon optimization of their cDNA. In accordance with previous localization studies in oocytes and plants, ZmPIP1;2 was mainly retained in intracellular membranes, while ZmPIP2;5 was localized to the plasma membrane. However, upon co-expression with ZmPIP2;5, ZmPIP1;2 was re-localized to the plasma membrane. Using a non-functional plasma membrane-localized ZmPIP2;5 mutant to deliver ZmPIP1;2 to the plasma membrane, we demonstrated that, in contrast to wild type ZmPIP2;5, ZmPIP1;2 was not permeable to hydrogen peroxide. Our study further highlighted the fact that, when using the yeast system, which is widely employed to study substrates for plant aquaporins and other transporters, although positive transport assay results allow direct conclusions to be drawn regarding solute permeability, negative results require additional control experiments to show that the protein is expressed and localized correctly before concluding on the lack of transport activity.
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Affiliation(s)
- Gerd P Bienert
- Université catholique de Louvain, Institut des Sciences de la Vie, Croix du Sud, 4-L7.07.14, 1348 Louvain-la-Neuve, Belgium; Leibniz Institute of Plant Genetics and Crop Plant Research, Corrensstrasse 3, 06466 Gatersleben, Germany
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30
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Prado K, Boursiac Y, Tournaire-Roux C, Monneuse JM, Postaire O, Da Ines O, Schäffner AR, Hem S, Santoni V, Maurel C. Regulation of Arabidopsis leaf hydraulics involves light-dependent phosphorylation of aquaporins in veins. THE PLANT CELL 2013; 25:1029-39. [PMID: 23532070 PMCID: PMC3634675 DOI: 10.1105/tpc.112.108456] [Citation(s) in RCA: 122] [Impact Index Per Article: 11.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/12/2012] [Revised: 02/11/2013] [Accepted: 03/04/2013] [Indexed: 05/18/2023]
Abstract
The water status of plant leaves depends on the efficiency of the water supply, from the vasculature to inner tissues. This process is under hormonal and environmental regulation and involves aquaporin water channels. In Arabidopsis thaliana, the rosette hydraulic conductivity (Kros) is higher in darkness than it is during the day. Knockout plants showed that three plasma membrane intrinsic proteins (PIPs) sharing expression in veins (PIP1;2, PIP2;1, and PIP2;6) contribute to rosette water transport, and PIP2;1 can fully account for Kros responsiveness to darkness. Directed expression of PIP2;1 in veins of a pip2;1 mutant was sufficient to restore Kros. In addition, a positive correlation, in both wild-type and PIP2;1-overexpressing plants, was found between Kros and the osmotic water permeability of protoplasts from the veins but not from the mesophyll. Thus, living cells in veins form a major hydraulic resistance in leaves. Quantitative proteomic analyses showed that light-dependent regulation of Kros is linked to diphosphorylation of PIP2;1 at Ser-280 and Ser-283. Expression in pip2;1 of phosphomimetic and phosphorylation-deficient forms of PIP2;1 demonstrated that phosphorylation at these two sites is necessary for Kros enhancement under darkness. These findings establish how regulation of a single aquaporin isoform in leaf veins critically determines leaf hydraulics.
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Affiliation(s)
- Karine Prado
- Biochimie et Physiologie Moléculaire des Plantes, Unité Mixte de Recherche 5004, Centre National de la Recherche Scientifique/Unité Mixte de Recherche 0386, Institut National de la Recherche Agronomique/Montpellier SupAgro/Université Montpellier II, F-34060 Montpellier, cedex 2, France
| | - Yann Boursiac
- Biochimie et Physiologie Moléculaire des Plantes, Unité Mixte de Recherche 5004, Centre National de la Recherche Scientifique/Unité Mixte de Recherche 0386, Institut National de la Recherche Agronomique/Montpellier SupAgro/Université Montpellier II, F-34060 Montpellier, cedex 2, France
| | - Colette Tournaire-Roux
- Biochimie et Physiologie Moléculaire des Plantes, Unité Mixte de Recherche 5004, Centre National de la Recherche Scientifique/Unité Mixte de Recherche 0386, Institut National de la Recherche Agronomique/Montpellier SupAgro/Université Montpellier II, F-34060 Montpellier, cedex 2, France
| | - Jean-Marc Monneuse
- Laboratoire de Protéomique Fonctionnelle, Institut National de la Recherche Agronomique Unité de Recherche 1199, F-34060 Montpellier cedex 2, France
| | - Olivier Postaire
- Biochimie et Physiologie Moléculaire des Plantes, Unité Mixte de Recherche 5004, Centre National de la Recherche Scientifique/Unité Mixte de Recherche 0386, Institut National de la Recherche Agronomique/Montpellier SupAgro/Université Montpellier II, F-34060 Montpellier, cedex 2, France
| | - Olivier Da Ines
- Institute of Biochemical Plant Pathology, Helmholtz Zentrum München, 85764 Neuherberg, Germany
| | - Anton R. Schäffner
- Institute of Biochemical Plant Pathology, Helmholtz Zentrum München, 85764 Neuherberg, Germany
| | - Sonia Hem
- Laboratoire de Protéomique Fonctionnelle, Institut National de la Recherche Agronomique Unité de Recherche 1199, F-34060 Montpellier cedex 2, France
| | - Véronique Santoni
- Biochimie et Physiologie Moléculaire des Plantes, Unité Mixte de Recherche 5004, Centre National de la Recherche Scientifique/Unité Mixte de Recherche 0386, Institut National de la Recherche Agronomique/Montpellier SupAgro/Université Montpellier II, F-34060 Montpellier, cedex 2, France
| | - Christophe Maurel
- Biochimie et Physiologie Moléculaire des Plantes, Unité Mixte de Recherche 5004, Centre National de la Recherche Scientifique/Unité Mixte de Recherche 0386, Institut National de la Recherche Agronomique/Montpellier SupAgro/Université Montpellier II, F-34060 Montpellier, cedex 2, France
- Address correspondence to
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31
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Frick A, Järvå M, Törnroth-Horsefield S. Structural basis for pH gating of plant aquaporins. FEBS Lett 2013; 587:989-93. [DOI: 10.1016/j.febslet.2013.02.038] [Citation(s) in RCA: 61] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/03/2013] [Revised: 02/14/2013] [Accepted: 02/15/2013] [Indexed: 11/27/2022]
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32
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Arbuscular Mycorrhizal Fungi and the Tolerance of Plants to Drought and Salinity. SOIL BIOLOGY 2013. [DOI: 10.1007/978-3-642-39317-4_14] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
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Clark GB, Morgan RO, Fernandez MP, Roux SJ. Evolutionary adaptation of plant annexins has diversified their molecular structures, interactions and functional roles. THE NEW PHYTOLOGIST 2012; 196:695-712. [PMID: 22994944 DOI: 10.1111/j.1469-8137.2012.04308.x] [Citation(s) in RCA: 88] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/08/2012] [Accepted: 07/29/2012] [Indexed: 05/04/2023]
Abstract
Annexins are an homologous, structurally related superfamily of proteins known to associate with membrane lipid and cytoskeletal components. Their involvement in membrane organization, vesicle trafficking and signaling is fundamental to cellular processes such as growth, differentiation, secretion and repair. Annexins exist in some prokaryotes and all eukaryotic phyla within which plant annexins represent a monophyletic clade of homologs descended from green algae. Genomic, proteomic and transcriptomic approaches have provided data on the diversity, cellular localization and expression patterns of different plant annexins. The availability of 35 complete plant genomes has enabled systematic comparative analysis to determine phylogenetic relationships, characterize structures and observe functional specificity between and within individual subfamilies. Short amino termini and selective erosion of the canonical type 2 calcium coordinating sites in domains 2 and 3 are typical of plant annexins. The convergent evolution of alternate functional motifs such as 'KGD', redox-sensitive Cys and hydrophobic Trp/Phe residues argues for their functional relevance and contribution to mechanistic diversity in plant annexins. This review examines recent findings and advances in plant annexin research with special focus on their structural diversity, cellular and molecular interactions and their potential integrated functions in the broader context of physiological responses.
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Affiliation(s)
- Greg B Clark
- Section of Molecular Cell and Developmental Biology, University of Texas, Austin, TX, 78713, USA
| | - Reginald O Morgan
- Department of Biochemistry and Molecular Biology, Faculty of Medicine and University Institute of Biotechnology of Asturias, University of Oviedo, E-33006, Oviedo, Spain
| | - Maria-Pilar Fernandez
- Department of Biochemistry and Molecular Biology, Faculty of Medicine and University Institute of Biotechnology of Asturias, University of Oviedo, E-33006, Oviedo, Spain
| | - Stanley J Roux
- Section of Molecular Cell and Developmental Biology, University of Texas, Austin, TX, 78713, USA
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Leitão L, Prista C, Moura TF, Loureiro-Dias MC, Soveral G. Grapevine aquaporins: gating of a tonoplast intrinsic protein (TIP2;1) by cytosolic pH. PLoS One 2012; 7:e33219. [PMID: 22427995 PMCID: PMC3299758 DOI: 10.1371/journal.pone.0033219] [Citation(s) in RCA: 57] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/26/2011] [Accepted: 02/09/2012] [Indexed: 01/25/2023] Open
Abstract
Grapevine (Vitis vinifera L.) is one of the oldest and most important perennial crops being considered as a fruit ligneous tree model system in which the water status appears crucial for high fruit and wine quality, controlling productivity and alcohol level. V. vinifera genome contains 28 genes coding for aquaporins, which acting in a concerted and regulated manner appear relevant for plant withstanding extremely unfavorable drought conditions essential for the quality of berries and wine. Several Vv aquaporins have been reported to be expressed in roots, shoots, berries and leaves with clear cultivar differences in their expression level, making their in vivo biochemical characterization a difficult task. In this work V. vinifera cv. Touriga nacional VvTnPIP1;1, VvTnPIP2;2 and VvTnTIP2;1 were expressed in yeast and water transport activity was characterized in intact cells of the transformants. The three aquaporins were localized in the yeast plasma membrane but only VvTnTIP2;1 expression enhanced the water permeability with a concomitant decrease of the activation energy of water transport. Acidification of yeast cytosol resulted in loss of VvTnTIP2;1 activity. Sequence analysis revealed the presence of a His(131) residue, unusual in TIPs. By site directed mutagenesis, replacement of this residue by aspartic acid or alanine resulted in loss of pH(in) dependence while replacement by lysine resulted in total loss of activity. In addition to characterization of VvTn aquaporins, these results shed light on the gating of a specific tonoplast aquaporin by cytosolic pH.
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Affiliation(s)
- Luís Leitão
- CBAA, Instituto Superior de Agronomia, Universidade Técnica de Lisboa, Lisbon, Portugal
- UMR Bioemco, équipe IBIOS, Université Paris Est Créteil, Créteil, France
| | - Catarina Prista
- CBAA, Instituto Superior de Agronomia, Universidade Técnica de Lisboa, Lisbon, Portugal
| | | | | | - Graça Soveral
- REQUIMTE, Dep. Química, FCT-UNL, Caparica, Portugal
- Dep. Bioquímica e Biologia Humana, Faculdade de Farmácia, Universidade de Lisboa, Lisbon, Portugal
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Navarro-Ródenas A, Ruíz-Lozano JM, Kaldenhoff R, Morte A. The aquaporin TcAQP1 of the desert truffle Terfezia claveryi is a membrane pore for water and CO(2) transport. MOLECULAR PLANT-MICROBE INTERACTIONS : MPMI 2012; 25:259-266. [PMID: 22088195 DOI: 10.1094/mpmi-07-11-0190] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/31/2023]
Abstract
Terfezia claveryi is a hypogeous mycorrhizal fungus belonging to the so-called "desert truffles," with a good record as an edible fungus and of considerable economic importance. T. claveryi improves the tolerance to water stress of the host plant Helianthemum almeriense, for which, in field conditions, symbiosis with T. claveryi is valuable for its survival. We have characterized cDNAs from T. claveryi and identified a sequence related to the aquaporin gene family. The full-length sequence was obtained by rapid amplification of cDNA ends and was named TcAQP1. This aquaporin gene encoded a functional water-channel protein, as demonstrated by heterologous expression assays in Saccharomyces cerevisiae. The mycorrhizal fungal aquaporin increased both water and CO(2) conductivity in the heterologous expression system. The expression patterns of the TcAQP1 gene in mycelium, under different water potentials, and in mycorrhizal plants are discussed. The high levels of water conductivity of TcAQP1 could be related to the adaptation of this mycorrhizal fungus to semiarid areas. The CO(2) permeability of TcAQP1 could be involved in the regulation of T. claveryi growth during presymbiotic phases, making it a good candidate to be considered a novel molecular signaling channel in mycorrhizal fungi.
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36
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Hossain Z, Nouri MZ, Komatsu S. Plant Cell Organelle Proteomics in Response to Abiotic Stress. J Proteome Res 2011; 11:37-48. [DOI: 10.1021/pr200863r] [Citation(s) in RCA: 130] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2022]
Affiliation(s)
- Zahed Hossain
- National Institute of Crop Science, Tsukuba 305-8518, Japan
- Department of Botany, West Bengal State University, Kolkata-700126, West Bengal, India
| | - Mohammad-Zaman Nouri
- National Institute of Crop Science, Tsukuba 305-8518, Japan
- Rice Research Institute of Iran, Deputy of Mazandaran, Amol 46191-91951, Iran
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Li L, Ren F, Wei P, Chen Q, Chen J, Wang X. Identification of AtSM34, a novel tonoplast intrinsic protein-interacting polypeptide expressed in response to osmotic stress in germinating seedlings. ACTA ACUST UNITED AC 2011. [DOI: 10.1007/s11434-011-4793-4] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
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38
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Heckwolf M, Pater D, Hanson DT, Kaldenhoff R. The Arabidopsis thaliana aquaporin AtPIP1;2 is a physiologically relevant CO₂ transport facilitator. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2011; 67:795-804. [PMID: 21564354 DOI: 10.1111/j.1365-313x.2011.04634.x] [Citation(s) in RCA: 135] [Impact Index Per Article: 10.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/18/2023]
Abstract
Cellular exchange of carbon dioxide (CO₂) is of extraordinary importance for life. Despite this significance, its molecular mechanisms are still unclear and a matter of controversy. In contrast to other living organisms, plants are physiologically limited by the availability of CO₂. In most plants, net photosynthesis is directly dependent on CO₂ diffusion from the atmosphere to the chloroplast. Thus, it is important to analyze CO₂ transport with regards to its effect on photosynthesis. A mutation of the Arabidopsis thaliana AtPIP1;2 gene, which was characterized as a non-water transporting but CO₂ transport-facilitating aquaporin in heterologous expression systems, correlated with a reduction in photosynthesis under a wide range of atmospheric CO₂ concentrations. Here, we could demonstrate that the effect was caused by reduced CO₂ conductivity in leaf tissue. It is concluded that the AtPIP1;2 gene product limits CO₂ diffusion and photosynthesis in leaves.
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Affiliation(s)
- Marlies Heckwolf
- Darmstadt University of Technology, Applied Plant Science, Schnittspahnstr. 10, D-64287 Darmstadt, Germany
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Chauvigné F, Lubzens E, Cerdà J. Design and characterization of genetically engineered zebrafish aquaporin-3 mutants highly permeable to the cryoprotectant ethylene glycol. BMC Biotechnol 2011; 11:34. [PMID: 21477270 PMCID: PMC3079631 DOI: 10.1186/1472-6750-11-34] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/11/2010] [Accepted: 04/08/2011] [Indexed: 12/12/2022] Open
Abstract
Background Increasing cell membrane permeability to water and cryoprotectants is critical for the successful cryopreservation of cells with large volumes. Artificial expression of water-selective aquaporins or aquaglyceroporins (GLPs), such as mammalian aquaporin-3 (AQP3), enhances cell permeability to water and cryoprotectants, but it is known that AQP3-mediated water and solute permeation is limited and pH dependent. To exploit further the possibilities of using aquaporins in cryobiology, we investigated the functional properties of zebrafish (Danio rerio) GLPs. Results Water, glycerol, propylene glycol and ethylene glycol permeability of zebrafish Aqp3a, -3b, -7, -9a, -9b, -10a and -10b, and human AQP3, was examined. Expression in Xenopus laevis oocytes indicated that the permeability of DrAqp3a and -3b to ethylene glycol was higher than for glycerol or propylene glycol under isotonic conditions, unlike other zebrafish GLPs and human AQP3, which were more permeable to glycerol. In addition, dose-response experiments and radiolabeled ethylene glycol uptake assays suggested that oocytes expressing DrAqp3b were permeated by this cryoprotectant more efficiently than those expressing AQP3. Water and ethylene glycol transport through DrAqp3a and -3b were, however, highest at pH 8.5 and completely abolished at pH 6.0. Point mutations in the DrAqp3b amino acid sequence rendered two constructs, DrAqp3b-T85A showing higher water and ethylene glycol permeability at neutral and alkaline pH, and DrAqp3b-H53A/G54H/T85A, no longer inhibited at acidic pH but less permeable than the wild type. Finally, calculation of permeability coefficients for ethylene glycol under concentration gradients confirmed that the two DrAqp3b mutants were more permeable than wild-type DrAqp3b and/or AQP3 at neutral pH, resulting in a 2.6- to 4-fold increase in the oocyte intracellular concentration of ethylene glycol. Conclusion By single or triple point mutations in the DrAqp3b amino acid sequence, we constructed one mutant with enhanced ethylene glycol permeability and another with reduced pH sensitivity. The DrAqp3b and the two mutant constructs may be useful for application in cryobiology.
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Affiliation(s)
- François Chauvigné
- Laboratory of Institut de Recerca i Tecnologia Agroalimentàries, Consejo Superior de Investigaciones Científicas, 08003 Barcelona, Spain
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Muries B, Faize M, Carvajal M, Martínez-Ballesta MDC. Identification and differential induction of the expression of aquaporins by salinity in broccoli plants. MOLECULAR BIOSYSTEMS 2011; 7:1322-35. [PMID: 21321750 DOI: 10.1039/c0mb00285b] [Citation(s) in RCA: 58] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
Abstract
Plant aquaporins belong to a large superfamily of conserved proteins called the major intrinsic proteins (MIPs). There is limited information about the diversity of MIPs and their water transport capacity in broccoli (Brassica oleracea) plants. In this study, the cDNAs of isoforms of Plasma Membrane Intrinsic Proteins (PIPs), a class of aquaporins, from broccoli roots have been partially sequenced. Thus, sequencing experiments led to the identification of eight PIP1 and three PIP2 genes encoding PIPs in B. oleracea plants. The occurrence of different gene products encoding PIPs suggests that they may play different roles in plants. The screening of their expression as well as the expression of two specific PIP2 isoforms (BoPIP2;2 and BoPIP2;3), in different organs and under different salt-stress conditions in two varieties, has helped to unravel the function and the regulation of PIPs in plants. Thus, a high degree of BoPIP2;3 expression in mature leaves suggests that this BoPIP2;3 isoform plays important roles, not only in root water relations but also in the physiology and development of leaves. In addition, differences between gene and protein patterns led us to consider that mRNA synthesis is inhibited by the accumulation of the corresponding encoded protein. Therefore, transcript levels, protein abundance determination and the integrated hydraulic architecture of the roots must be considered in order to interpret the response of broccoli to salinity.
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Affiliation(s)
- Beatriz Muries
- Dpto Nutrición Vegetal, Centro de Edafología y Biología Aplicada del Segura, Campus de Espinardo, 30100 Murcia, Spain
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Soto G, Fox R, Ayub N, Alleva K, Guaimas F, Erijman EJ, Mazzella A, Amodeo G, Muschietti J. TIP5;1 is an aquaporin specifically targeted to pollen mitochondria and is probably involved in nitrogen remobilization in Arabidopsis thaliana. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2010; 64:1038-47. [PMID: 21143683 DOI: 10.1111/j.1365-313x.2010.04395.x] [Citation(s) in RCA: 34] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/03/2023]
Abstract
In plant sexual reproduction, water and solute movement are tightly regulated, suggesting the involvement of aquaporins. We previously identified TIP5;1 and TIP1;3 as the only Arabidopsis aquaporin genes that are selectively and highly expressed in mature pollen, and showed that they can transport both water and urea when expressed in Xenopus oocytes. Here, we show that TIP5;1 has unusual characteristics, as its water transport activity is regulated by pH. Analysis of the water transport activity of a mutant version of TIP5;1 (TIP5;1-H131A) and amino acid alignment with other plant aquaporins regulated by pH suggested that a conserved motif is involved in pH sensing. GFP-TIP5;1 is located in the mitochondria of pollen tubes. The single mutants tip1;3 and tip5;1, as well as the tip1;3 tip5;1 double mutant, are fertile, but all mutants had shorter than normal pollen tubes when germinated in vitro in the absence of exogenous nitrogen. Thus, we propose that TIP5;1 and TIP1;3 are involved in nitrogen recycling in pollen tubes of Arabidopsis thaliana.
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Affiliation(s)
- Gabriela Soto
- Instituto de Ingeniería Genética y Biología Molecular (INGEBI-CONICET), Vuelta de Obligado 2490 Piso 2, 1428 Buenos Aires, Argentina
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Wang Y, Shaikh SA, Tajkhorshid E. Exploring transmembrane diffusion pathways with molecular dynamics. Physiology (Bethesda) 2010; 25:142-54. [PMID: 20551228 DOI: 10.1152/physiol.00046.2009] [Citation(s) in RCA: 33] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/06/2023] Open
Abstract
Transmembrane exchange of materials is a fundamental process in biology. Molecular dynamics provides a powerful method to investigate in great detail various aspects of the phenomenon, particularly the permeation of small uncharged molecules, which continues to pose a challenge to experimental studies. We will discuss some of the recent simulation studies investigating the role of lipid-mediated and protein-mediated mechanisms in permeation of water and gas molecules across the membrane.
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Affiliation(s)
- Yi Wang
- Department of Biochemistry, Center for Biophysics and Computational Biology, and Beckman Institute for Advanced Science and Technology, University of Illinois at Urbana-Champaign, Urbana, Illinois, USA
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Bellati J, Alleva K, Soto G, Vitali V, Jozefkowicz C, Amodeo G. Intracellular pH sensing is altered by plasma membrane PIP aquaporin co-expression. PLANT MOLECULAR BIOLOGY 2010; 74:105-18. [PMID: 20593222 DOI: 10.1007/s11103-010-9658-8] [Citation(s) in RCA: 57] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/21/2009] [Accepted: 06/17/2010] [Indexed: 05/03/2023]
Abstract
The plant plasma membrane barrier can express aquaporins (PIP1 and PIP2) that show two intriguing aspects: (1) the potential of modulating whole membrane water permeability by co-expression of both types, which have recently been distinguished for showing a different capacity to reach the plasma membrane; and (2) the faculty to reduce water permeation through the pore after cytosolic acidification, as a consequence of a gating process. Our working hypothesis is that these two key features might enhance plasticity of the membrane water transport capacity if they jointly trigger any cooperative interaction. In previous work, we proved by biophysical approaches that the plasma membrane of the halophyte Beta vulgaris storage root presents highly permeable aquaporins that can be shut down by acidic pH. Root Beta vulgaris PIPs were therefore subcloned and expressed in Xenopus oocytes. Co-expression of BvPIP1;1 and BvPIP2;2 not only enhances oocyte plasma membrane water permeability synergistically but also reinforces pH inhibitory response from partial to complete shut down after cytosolic pH acidification. This pH dependent behavior shows that PIP1-PIP2 co-expression accounts for a different pH sensitivity in comparison with PIP2 expression. These results prove for the first time that PIP co-expression modulates the membrane water permeability through a pH regulatory response, enhancing in this way membrane versatility to adjust its water transfer capacity.
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Affiliation(s)
- Jorge Bellati
- Departamento de Fisiología, Universidad de Buenos Aires, Argentina
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Casado-Vela J, Muries B, Carvajal M, Iloro I, Elortza F, Martínez-Ballesta M. Analysis of Root Plasma Membrane Aquaporins from Brassica oleracea: Post-Translational Modifications, de novo Sequencing and Detection of Isoforms by High Resolution Mass Spectrometry. J Proteome Res 2010; 9:3479-94. [DOI: 10.1021/pr901150g] [Citation(s) in RCA: 23] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/23/2023]
Affiliation(s)
- J. Casado-Vela
- Plataforma de Proteómica, CIC bioGUNE, CIBERehd, ProteoRed, Parque Tecnológico de Bizkaia, Edifício 800, 48160, Bizkaia, Spain, and Departamento de Nutrición Vegetal, Centro de Edafología y Biología Aplicada del Segura - CSIC, Apdo. Correos 164, 30100 Espinardo, Murcia, Spain
| | - B. Muries
- Plataforma de Proteómica, CIC bioGUNE, CIBERehd, ProteoRed, Parque Tecnológico de Bizkaia, Edifício 800, 48160, Bizkaia, Spain, and Departamento de Nutrición Vegetal, Centro de Edafología y Biología Aplicada del Segura - CSIC, Apdo. Correos 164, 30100 Espinardo, Murcia, Spain
| | - M. Carvajal
- Plataforma de Proteómica, CIC bioGUNE, CIBERehd, ProteoRed, Parque Tecnológico de Bizkaia, Edifício 800, 48160, Bizkaia, Spain, and Departamento de Nutrición Vegetal, Centro de Edafología y Biología Aplicada del Segura - CSIC, Apdo. Correos 164, 30100 Espinardo, Murcia, Spain
| | - I. Iloro
- Plataforma de Proteómica, CIC bioGUNE, CIBERehd, ProteoRed, Parque Tecnológico de Bizkaia, Edifício 800, 48160, Bizkaia, Spain, and Departamento de Nutrición Vegetal, Centro de Edafología y Biología Aplicada del Segura - CSIC, Apdo. Correos 164, 30100 Espinardo, Murcia, Spain
| | - F. Elortza
- Plataforma de Proteómica, CIC bioGUNE, CIBERehd, ProteoRed, Parque Tecnológico de Bizkaia, Edifício 800, 48160, Bizkaia, Spain, and Departamento de Nutrición Vegetal, Centro de Edafología y Biología Aplicada del Segura - CSIC, Apdo. Correos 164, 30100 Espinardo, Murcia, Spain
| | - M.C. Martínez-Ballesta
- Plataforma de Proteómica, CIC bioGUNE, CIBERehd, ProteoRed, Parque Tecnológico de Bizkaia, Edifício 800, 48160, Bizkaia, Spain, and Departamento de Nutrición Vegetal, Centro de Edafología y Biología Aplicada del Segura - CSIC, Apdo. Correos 164, 30100 Espinardo, Murcia, Spain
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Shelden MC, Howitt SM, Kaiser BN, Tyerman SD. Identification and functional characterisation of aquaporins in the grapevine, Vitis vinifera. FUNCTIONAL PLANT BIOLOGY : FPB 2010; 36:1065-1078. [PMID: 32688718 DOI: 10.1071/fp09117] [Citation(s) in RCA: 29] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/21/2009] [Accepted: 07/28/2009] [Indexed: 05/10/2023]
Abstract
Plant aquaporins belong to a large superfamily of conserved proteins called the major intrinsic proteins (MIPs). There is limited information about the diversity of MIPs in grapevine, and their water transport capacity. The aim of the present study was to identify MIPs from grapevine and functionally characterise water transport of a subset of MIPs. Candidate genes were identified, by screening a Vitis vinifera L. (cv. Cabernet Sauvignon) cDNA library with gene specific probes, for aquaporin cDNAs encoding members of the plasma membrane intrinsic protein (PIP) and tonoplast intrinsic protein (TIP) subfamilies. The screen resulted in the identification of 11 full-length and two partial length aquaporin cDNAs. VvTIP2;1 isoforms had different 3' UTRs, immediately upstream of the poly(A) tail, suggesting the presence of multiple cleavage sites for polyadenylation. Using published genome sequences of grapevine, we conducted a phylogenetic analysis of the MIPs with previously characterised MIPs from Arabidopsis. We identified 23 full-length MIP genes from the V. vinifera genome sequence of a near homozygous line (PN40024) that cluster into the four main subfamilies (and subgroups within) identified in other species. However, based on the identification of PIP2 genes in Cabernet Sauvignon that were not present in the PN40024 genome, there are likely to be more than 23 MIP genes in other heterozygous grapevine cultivars. Water transport capacity was determined for several PIPs and TIPs, by expression in Xenopus oocytes. Only VvPIP2 and VvTIP proteins function as water channels with the exception of VvPIP2;5. VvPIP2;5 differs from the water conducting VvPIP2;1 by the substitution of two highly conserved amino acids in Loop B (G97S, G100W), which was shown by homology modelling to likely form a hydrophobic block of the water pore.
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Affiliation(s)
- Megan C Shelden
- School of Agriculture, Food and Wine, University of Adelaide, Waite Campus, Glen Osmond, SA 5064, Australia
| | - Susan M Howitt
- Biochemistry and Molecular Biology, Research School of Biology, Australian National University, Canberra, ACT 0200, Australia
| | - Brent N Kaiser
- School of Agriculture, Food and Wine, University of Adelaide, Waite Campus, Glen Osmond, SA 5064, Australia
| | - Stephen D Tyerman
- School of Agriculture, Food and Wine, University of Adelaide, Waite Campus, Glen Osmond, SA 5064, Australia
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Komatsu S, Wada T, Abaléa Y, Nouri MZ, Nanjo Y, Nakayama N, Shimamura S, Yamamoto R, Nakamura T, Furukawa K. Analysis of plasma membrane proteome in soybean and application to flooding stress response. J Proteome Res 2009; 8:4487-99. [PMID: 19658398 DOI: 10.1021/pr9002883] [Citation(s) in RCA: 53] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/18/2023]
Abstract
The plasma membrane acts as the primary interface between the cellular cytoplasm and the extracellular environment. To investigate the function of the plasma membrane in response to flooding stress, plasma membrane was purified from root and hypocotyl of soybean seedlings using an aqueous two-phase partitioning method. Purified plasma membrane proteins with 81% purity were analyzed using either two-dimensional polyacrylamide gel electrophoresis followed by mass spectrometry and protein sequencing (2-DE MS/sequencer)-based proteomics or nanoliquid chromatography followed by mass spectrometry (nanoLC-MS/MS)-based proteomics. The number of hydrophobic proteins identified by nanoLC-MS/MS-based proteomics was compared with those identified by 2-DE MS/sequencer-based proteomics. These techniques were applied to identify the proteins in soybean that are responsive to flooding stress. Results indicate insights of plasma membrane into the response of soybean to flooding stress: (i) the proteins located in the cell wall are up-regulated in plasma membrane; (ii) the proteins related to antioxidative system play a crucial role in protecting cells from oxidative damage; (iii) the heat shock cognate protein plays a role in protecting proteins from denaturation and degradation during flooding stress; and (iv) the signaling related proteins might regulate ion homeostasis.
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Affiliation(s)
- Setsuko Komatsu
- National Institute of Crop Science, Tsukuba 305-8518, Japan.
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47
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Ludewig U, Dynowski M. Plant aquaporin selectivity: where transport assays, computer simulations and physiology meet. Cell Mol Life Sci 2009; 66:3161-75. [PMID: 19565186 PMCID: PMC11115745 DOI: 10.1007/s00018-009-0075-6] [Citation(s) in RCA: 33] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/22/2009] [Revised: 06/08/2009] [Accepted: 06/10/2009] [Indexed: 10/20/2022]
Abstract
Plants contain a large number of aquaporins with different selectivity. These channels generally conduct water, but some additionally conduct NH(3), CO(2) and/or H(2)O(2). The experimental evidence and molecular basis for the transport of a given solute, the validation with molecular dynamics simulations and the physiological impact of the selectivity are reviewed here. The aromatic/arginine (ar/R) constriction is most important for solute selection, but the exact pore requirements for efficient conduction of small solutes remain difficult to predict. Yeast growth assays are valuable for screening substrate selectivity and are explicitly shown for hydrogen peroxide and methylamine, a transport analog of ammonia. Independent assays need to address the relevance of different substrates for each channel in its physiological context. This is emphasized by the fact that several plant NIP channels, which conduct several solutes, are specifically involved in the transport of metalloids, such as silicic acid, arsenite, or boric acid in planta.
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Affiliation(s)
- Uwe Ludewig
- Institute of Botany, Darmstadt University of Technology, Schnittspahnstr. 10, 64287, Darmstadt, Germany.
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48
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Tungngoen K, Kongsawadworakul P, Viboonjun U, Katsuhara M, Brunel N, Sakr S, Narangajavana J, Chrestin H. Involvement of HbPIP2;1 and HbTIP1;1 aquaporins in ethylene stimulation of latex yield through regulation of water exchanges between inner liber and latex cells in Hevea brasiliensis. PLANT PHYSIOLOGY 2009; 151:843-56. [PMID: 19656906 PMCID: PMC2754619 DOI: 10.1104/pp.109.140228] [Citation(s) in RCA: 33] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/26/2009] [Accepted: 07/24/2009] [Indexed: 05/18/2023]
Abstract
Natural rubber is synthesized in specialized articulated cells (laticifers) located in the inner liber of Hevea brasiliensis. Upon bark tapping, the laticifer cytoplasm (latex) is expelled due to liber tissue turgor pressure. In mature virgin (untapped) trees, short-term kinetic studies confirmed that ethylene, the rubber yield stimulant used worldwide, increased latex yield, with a concomitant decrease in latex total solid content, probably through water influx in the laticifers. As the mature laticifers are devoid of plasmodesmata, the rapid water exchanges with surrounding liber cells probably occur via the aquaporin pathway. Two full-length aquaporin cDNAs (HbPIP2;1 and HbTIP1;1, for plasma membrane intrinsic protein and tonoplast intrinsic protein, respectively) were cloned and characterized. The higher efficiency of HbPIP2;1 than HbTIP1;1 in increasing plasmalemma water conductance was verified in Xenopus laevis oocytes. HbPIP2;1 was insensitive to HgCl(2). In situ hybridization demonstrated that HbPIP2;1 was expressed in all liber tissues in the young stem, including the laticifers. HbPIP2;1 was up-regulated in both liber tissues and laticifers, whereas HbTIP1;1 was down-regulated in liber tissues but up-regulated in laticifers in response to bark Ethrel treatment. Ethylene-induced HbPIP2;1 up-regulation was confirmed by western-blot analysis. The promoter sequences of both genes were cloned and found to harbor, among many others, ethylene-responsive and other chemical-responsive (auxin, copper, and sulfur) elements known to increase latex yield. Increase in latex yield in response to ethylene was emphasized to be linked with water circulation between the laticifers and their surrounding tissues as well as with the probable maintenance of liber tissue turgor, which together favor prolongation of latex flow.
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Affiliation(s)
- Kessarin Tungngoen
- Department of Biotechnology, Faculty of Science, Mahidol University, Bangkok 10400, Thailand
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Khandelia H, Jensen MØ, Mouritsen OG. To Gate or Not To Gate: Using Molecular Dynamics Simulations To Morph Gated Plant Aquaporins into Constitutively Open Conformations. J Phys Chem B 2009; 113:5239-44. [DOI: 10.1021/jp809152c] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Himanshu Khandelia
- MEMPHYS-Center for Biomembrane Physics, Department of Physics and Chemistry, University of Southern Denmark, Campusvej 55, DK-5230 Odense M, Denmark
| | - Morten Ø. Jensen
- MEMPHYS-Center for Biomembrane Physics, Department of Physics and Chemistry, University of Southern Denmark, Campusvej 55, DK-5230 Odense M, Denmark
| | - Ole G. Mouritsen
- MEMPHYS-Center for Biomembrane Physics, Department of Physics and Chemistry, University of Southern Denmark, Campusvej 55, DK-5230 Odense M, Denmark
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